Cucsat.G15448.T6 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGTCTCCCCGTGAAAGGAAAAAAGAAAATAGAAAGAAAGAAGAAAAAAAAGAAAAAAAAGAAAAAAACAATGGAAGGCTGGTTGATATGATATCTTGTTTGGGTTTGCGATCGTGTTCCAATCTCTCTCACGTTGCCAACGTTCAGCGGGGCCCCCTTCTTCCAAATCTCACAATCTCCCTTTCACTCTTTCTTTCTTTCTTCTCTCATCCTTTCTCAATACTTCTTCGTTTTTGGTCTCCTCTCTCGAGATCGGTACGAACTCTCTGCTCTCTCTCTCACGCTCTGCACTCTATCTACTGTTTTTTCTTCTCACACCGCCCAACGCTTTCGTTCTTTTTTTTTTTTTTTTTCTTTTTTCTTTTTTTTTTTTATCTATCTAGGCATCTTAGAGCAAACGATCACAGCAACGCCTGAGTTTCTAGGGCTTCGATCTTCACACACACTTCGCCAAAATGAATGACGCAGATGTTTCCAAGCAGATCCAGCAGATGGTCAGGTTCATCCGCCAGGAAGCCGAGGAAAAGGCCAACGAGATCTCCGTCTCTGCTGAAGAAGTATTTCTTTCATTTTTCCTTCGATTTCTACTTCTTTCTGCTTTAGATGCCATGATTTTACTTCTTACTTCTCTAATCCTCCTAAGAACAACCTACTTATCGGCCTTGCTTTATGATCGCTTACCTATGCCTTACAGATTCTAGGTTTCGTATATGTTGTATTTCTGTTTGTGTGCATTTACTACTGAACGGAAGGAATTCATTTTCTTTTTTCTTTCTATTGTAGGAATTCAATATAGAAAAGTTGCAGCTGGTTGAGGCAGAGAAGAAGAAGATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATGTAATTATCTGCACCTTTTTTCCTCCCTATAACTTGTTAATTATAGTTTCATTATTCATGCTTCATAGTTGCTTGGTTTGTTAGGGCGCACAATTTTCAATTGCTGTAAAGATTTCTTTGGTTTTTCTGCCTCAAAGTTTGTAATAGATGAATAACATCTTCGTGGAATTGATGTTTTATCCAGCGAGTACTCAATGCAGCTCAATGCTTCTCGTATCAAAGTTCTGCAAGCTCAGGATGATGTTGTAAACGACATGAAAGAGGCAGCATCAAAGGAGCTTCTCAGTATAGGCCAAAATGAACATGTCTACAAAAATCTTTTGAAGGATCTCATTGTTCAGGTTAGTAAATTTCAAATATTATCTATATTTGAATGTCATAAAGTTTGATGTATCCTTAATGATTCTTTGATTTAGTAAAACTTCTTAAAGTCATAAAGTTTTCTGCGTATGGGCTAGTTCTTATAGTTGTCTGTTTATTACACTTAAAGAGTTCATTGCAAGTGCTACTAATTGTTTATGCTAGATAATTAGGAATTTTAAATGTCCTAAACAAATCTTTGTTTCACATAGCTCTGGATGGATAAAATTCTCCTATCTGTAAGGTATCAAATTGAAACACTCATCATCCTGATAAACAATGATTGAGTTTTCTTTTTTTCATCTCTTTGTTGATGGTTGCTGCTTAGAAGGCATTGTGGGGGTTGATCTTCCCTTTAAATTTTGGTTAGTATGGTTGCTGTAGGATAAGTATGATGCTGGATATACATATACTAGATGTGTTGTGCACTGCCTAAAGGTTTTTTGTTATTTTATAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTATTGCGATGCCGCAAAAGTGACGTCTATTTGGTAGAGTCTGTGCTGGGTTCAGCAGCTGTTGAATATGCAGAGAAAGAAAAAGTTCATGAGCCAGAGATCATTGTTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCAGCACGGTCCTTCTTGGTAATCTTTCCTTTTCGATCTTTACCATTTTTTGCATATGAACTTCCTGCTTCTTAAACTTGGTCAGTTATAATATTATTTCAGCATTGGCAAAGTTATGCTTATGTGTTATGAGATTTGGAGGTAACTTTTGAATACTTTGCCTCAGCCTGACAGGCATATCTTATTTTTCTAGTTTGTAACTAATTACACCTTCCCTGGGGACAGGCACAATTTTTTTTAGGATTATTAATCCTGCAATTTCTTACAATTGCAGATTGTACCTTTTTATTTTGACAATAGTCTTAGATACACCATGGTTCGTTCATTTCCAAATCTGTGAATTGAACTATGCTAATAAACAATACTGTTACTTTTGATAGAGATACTAGGCATGGCATTTTTTATGTTAATCCATGTTTACTAATTCAGTTAAGAAGTATCAGTTGTAATTGATAGAATGGTTCAATTTGTAGAATTTGCAAACTACGAGGGCTGTCAAATATGAACTTCAAAATACAAGGTTATGCTGTATGAAATTTGACCGGAGTACAATTTAAAATTTTCTCTATGTAAATTGTATTGAGCCCTTGTATCACAAGGTTTTCTCCTTTTGGTTCTCTATGCTATGCAGTATGCACTGTTTTCTATGAGAAATGAACAATATGTCTATAGGCTTCTAATATTAAGCTTTGATCGTTCAGCTCTGGAGGAGTGGTCTTGGCATCTCGAGATGGGAAGATTGTTTGTGAGAACACCCTTGATGCTAGATTGGATGTTGTGTTCCGTAAAAAACTTCCAGAGGTACGTATACTTCTCAACCATACCTTACTGTGTTACTGGGGTGGGTGCTAATTACATCACTAATTACTAATCCGCTCTAATTGTCTTACATCATTTTTAGAGCGAAAAAGTTCTTCAAAAAGAATTTTAGAAAGGAAAAGATCCACATTTAGAAGATTTCTTGTTTTGCTAGAAGACAAGGCTTAGTTTACTAGGTTGTTACTCAGTTTTTTTCTTTTAATTTTATAAATGTCCACTGCTATCGGTTGTGTATTCTCTACATACAAAGATGGAAAAGTTTTGTTGCACCATTCCAGAATTTGGATGAATCTTTCACAAATAACAGCACATACTTAAAGATTAAGGAGAGGATGTGAGACAAGCTTTAACGTTTTTGCCGACTGCATCTGTAAGTTCCTCAGTGCGTTATTATTTTACTGACGGGTCCACTCAAATTCATCTGCCCAGGATGCATATTTCTAACTTTGGTTAGTTACGCTTAGATTGGCAATAAAGAGGTCAAACTTTTAACTTTTGATTAACATTTAGGAATATAAGCTCAACAACATGATTCCTTTACTTTATATCGGCCTTCATAGGTGCACTTTTATACTCCTCCCTCACCTTTTCTTATCCTTTAGGAATATACAAATTCTTTATTCGAGGATTTTACACTTTTGATAAAAGAACAAAAATACAAATACTTTATCGGGGGCTCTTTGCAATATTCCAATACGTCTTTCTTTTATCACCCCTTTTCCAACTGCAAAGGAACGCCGATGGTTTTTTATTTTGTTGCACCATTTTATCAACGTTGTTCATATTTAATGTAATAAACTAACAGCTGTATTTCTCATTGGCAGATCCGTAAAAGCCTTTTCAGTCAAGTTGCTGCATGATGGATTGGATTCGTCTCTATCATGGCGCTTCCTGTGAAATAATTTATGAGTCCAAATTTGGTCTTTGATGCGAATTTTATGCCCCGAATGTCACGTATCAATAAGTATTACATTCTTTGATTTTCTTTATCTGATAGTTACAATGTTCTTGGTTTGAGCTCTACGGGGAGGTAGGCGCCCCTATCGTCTCGATAGAACCTCCGGTATCAATAATATTCCAGCTTGATAAATTGGTTTCCTTGTTCAAGTTGGGATGGCCTTTTTAGTTAAGTATATTTTTGTGTGCACATCATACAGACTATTGTCTTTATATAATGTAATGTTTGACATTTCTCTTCTGAAGGCAGTTGTTTCAAGTAAAGTTATTTCACTTGCATTCAGTTTTGTATAAGTCTTTCAATAAAATACAATGTGTTCATTCTCCTAGGTATGGTTAAGAAATGATTGTTTATCTTATTATTGACTTTTC ATGAATGACGCAGATGTTTCCAAGCAGATCCAGCAGATGGTCAGGTTCATCCGCCAGGAAGCCGAGGAAAAGGCCAACGAGATCTCCGTCTCTGCTGAAGAAGAATTCAATATAGAAAAGTTGCAGCTGGTTGAGGCAGAGAAGAAGAAGATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCAATGCAGCTCAATGCTTCTCGTATCAAAGTTCTGCAAGCTCAGGATGATGTTGTAAACGACATGAAAGAGGCAGCATCAAAGGAGCTTCTCAGTATAGGCCAAAATGAACATGTCTACAAAAATCTTTTGAAGGATCTCATTGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTATTGCGATGCCGCAAAAGTGACGTCTATTTGGTAGAGTCTGTGCTGGGTTCAGCAGCTGTTGAATATGCAGAGAAAGAAAAAGTTCATGAGCCAGAGATCATTGTTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCAGCACGGTCCTTCTTGGTAA MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNDMKEAASKELLSIGQNEHVYKNLLKDLIVQSLLRLKEPAVLLRCRKSDVYLVESVLGSAAVEYAEKEKVHEPEIIVDHVHLPPGPSHHHQHGPSW Homology
BLAST of Cucsat.G15448.T6 vs. ExPASy Swiss-Prot
Match: O23948 (V-type proton ATPase subunit E OS=Gossypium hirsutum OX=3635 GN=VATE PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 7.2e-74 Identity = 157/191 (82.20%), Postives = 166/191 (86.91%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. ExPASy Swiss-Prot
Match: Q9SWE7 (V-type proton ATPase subunit E OS=Citrus limon OX=2708 GN=VATE PE=2 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 4.7e-73 Identity = 154/185 (83.24%), Postives = 170/185 (91.89%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. ExPASy Swiss-Prot
Match: Q9MB46 (V-type proton ATPase subunit E OS=Citrus unshiu OX=55188 GN=VATE PE=2 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 3.0e-72 Identity = 153/185 (82.70%), Postives = 169/185 (91.35%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. ExPASy Swiss-Prot
Match: Q41396 (V-type proton ATPase subunit E OS=Spinacia oleracea OX=3562 GN=VATE PE=2 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 1.4e-69 Identity = 143/182 (78.57%), Postives = 160/182 (87.91%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. ExPASy Swiss-Prot
Match: Q40272 (V-type proton ATPase subunit E OS=Mesembryanthemum crystallinum OX=3544 GN=VATE PE=2 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 8.9e-64 Identity = 137/181 (75.69%), Postives = 153/181 (84.53%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. NCBI nr
Match: XP_004148003.1 (V-type proton ATPase subunit E [Cucumis sativus] >KGN58149.1 hypothetical protein Csa_017428 [Cucumis sativus]) HSP 1 Score: 338 bits (866), Expect = 9.69e-116 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. NCBI nr
Match: XP_008450144.1 (PREDICTED: V-type proton ATPase subunit E [Cucumis melo]) HSP 1 Score: 327 bits (838), Expect = 1.78e-111 Identity = 178/184 (96.74%), Postives = 181/184 (98.37%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. NCBI nr
Match: XP_038877402.1 (V-type proton ATPase subunit E-like [Benincasa hispida] >XP_038877403.1 V-type proton ATPase subunit E-like [Benincasa hispida]) HSP 1 Score: 321 bits (823), Expect = 3.44e-109 Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. NCBI nr
Match: XP_022935239.1 (V-type proton ATPase subunit E-like [Cucurbita moschata]) HSP 1 Score: 317 bits (811), Expect = 2.31e-107 Identity = 173/182 (95.05%), Postives = 178/182 (97.80%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. NCBI nr
Match: XP_023528922.1 (V-type proton ATPase subunit E-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 315 bits (807), Expect = 9.39e-107 Identity = 172/182 (94.51%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. ExPASy TrEMBL
Match: A0A0A0LB25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G560240 PE=3 SV=1) HSP 1 Score: 338 bits (866), Expect = 4.69e-116 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. ExPASy TrEMBL
Match: A0A1S3BNM0 (V-type proton ATPase subunit E OS=Cucumis melo OX=3656 GN=LOC103491820 PE=3 SV=1) HSP 1 Score: 327 bits (838), Expect = 8.64e-112 Identity = 178/184 (96.74%), Postives = 181/184 (98.37%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. ExPASy TrEMBL
Match: A0A6J1F4V1 (V-type proton ATPase subunit E-like OS=Cucurbita moschata OX=3662 GN=LOC111442179 PE=3 SV=1) HSP 1 Score: 317 bits (811), Expect = 1.12e-107 Identity = 173/182 (95.05%), Postives = 178/182 (97.80%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. ExPASy TrEMBL
Match: A0A6J1J2K4 (V-type proton ATPase subunit E-like OS=Cucurbita maxima OX=3661 GN=LOC111482103 PE=3 SV=1) HSP 1 Score: 315 bits (807), Expect = 4.55e-107 Identity = 172/182 (94.51%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of Cucsat.G15448.T6 vs. ExPASy TrEMBL
Match: A0A6J1EKB7 (V-type proton ATPase subunit E-like OS=Cucurbita moschata OX=3662 GN=LOC111435337 PE=3 SV=1) HSP 1 Score: 310 bits (795), Expect = 3.06e-105 Identity = 169/183 (92.35%), Postives = 175/183 (95.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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