Cucsat.G15416.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G15416.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Regulator of Vps4 activity in the MVB pathway protein, putative
Location	ctg2009: 3915280 .. 3919033 (-)
RNA-Seq Expression	Cucsat.G15416.T2
Synteny	Cucsat.G15416.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAATAAAATGAGAAGTTTTTGTGCATTCATTGTTATCCATCACATTGAGCATTTTTAGCATTCAACTTAAATTTTCAAATGTGCTAAAAGCATCTAAGTGATAAGCTAAGCAGGGAGTAGGAAAATTATGCCTTGAATCATTCAAGTTGCGTTCTTGGTGTGGAGTGTCACCTTGTTGACACTTCTCTTGCTAGTTGCATCTCATCTCAATTTAAGTAGGTGAATTTGAAGGGTGTGACAGTCATCTCAGCACGTCATGAGTGGCTAAGGTAAGTTTTGTAGCTTAAAATAGGATTAAAACTCATTGTAATTTGGGTATGAAACATGGTTCTTTGAATTAAACAGATTTGGTTGAGAATTTACACACCCAGAAAGGAGGTTTGTTGTATCTCCCTTCTCTCTCTTCTCGCTCCGTCCTTCCACTGTTCTTTTAAGAATCTTCTTCAGCCAATTTCCAACAAGTTCTACAGTCACACTCAAACAGAAAGTGGAAGTGGAGATTTGCAAAGTGGTCAAATCTTTCTACTACATCTAGTACGAAAATGGGTTTTACAAAATCAAAGACGTAGACTTCGACAAAATCATGAACAATTTTCTCTCAAATGAACATTTCTTTTGCAAGAAAACTTCAATTTTTAAACCCATTGAATCTTATCATATTACAAGCCAGTCAATATCATCTCACCTTTATTTTTTTTCAATGGATTTGTGAATAGGGAAATTTGCCTGCCTTTTTCTTTTTATTTGTTGTATAGGAACAAGCCCTGACAATAAAAGACAGAATGTTTTCCGTGTGGGATACCCGAATTGGGCCCATTTCTCAATTGGGTACAAATAAATGTCACTTTAAGTAAAACTTTTGTTGACGATCAATAGAAAGCAATGTTTAAGAGTGTTGGTAAGATAATAGAAATTTTAACAAAATAGATCTATTATATATTCTAAAAATTTTAGTACAAAATAAAGTGAAATAGGAGAATATTTTTTCAATATAAAATAATAGTCTTTGTAAAAAAAAGAAATCACTCACAAGTGACATTCCCACAACAAAAACCACCTTTAGAGTGATTGATCCGAAATCACTTTTTCATGATAATCAAAGATCACAATTTTAGAGAAAGACATGACAAAAATGATTTTATACTGAAATCACTCCCAAACTCAACTAATTAAATATTTCTTTTAAAACCCATTCAACGCACATAACAACAAAATATAACAGAAAACTGAATAATTCTATTTGAACGTTTTTGCAGAACAAAAAGTATTTGAAAAAAGAAAGCACCTTTCACCAATTAAATGAGTTGATTAAAGGAGAAGTAATTCATAATGACTAGAAGTGGACATAATACCTCAGAAGCTTCCCATTTCCAAGTAATGTCATTTTCCAGACCAAAGCCGCCTGCTAATACCTCCATAGTCAATTCTGTTTGAACCATTCAAAGCCTGGAAATTTCACTAATCAACGCCTATTTCAAAGTCAATAATGGGAGCCAATTCTCTGACCTGCTTTAAGGAAAAAATAAATAAATTATGCATGTGAATGTTGGTAAAATAGTTAATCATGCATCTTCCCTATAAAACACAGGCAATGTCCGCAACCAACAACCAAATAGTAGTTCATTCAAGAGCTTTTCACAGGCAAACAAGCAGCAAACAGAATTTAAGGTTTTTCCATCATGGGAAGGAAACTGGATGCTTTACTGGGAAGGAACAGATATTTGAAGGCTTCCAAGTTTAAGACCCTTGCTAATATGGCCATTTCTAGGACTTCCATCCTAAAAAACCACCACCGCGCCCGTTGCTCCCTAGCTCGTGCCGATGTTCTTCAACTGTTGAATCTTAGTTACCAACATCGTGCTCAGCTTAGAGTAAATTTTTTCTCTCTCTTTCAGAACTCTGTAGTTCAGCCCCTTCTCTTTTTTTTCTTTTTTTCCAACCGCTGAGCTTGGATGTGAACGTTAATGAACAGGTTGAGATTGTGATCAAGGAGAATAACATGTTGGATGCTCTTGGAATGATAGAGGATTACTGCTGCCTTCTCGTAGAAAAGGTGGCTCTTCTTCAGATGAACAAGTAGGTCACCTTTCTTTCCTAGAATTTCACTATGTCATTTTTGTCAACTTTGGATGCAGGCCTTTTCAAAGATTTGAAACCTTTTCTGATTCTCTTTCGGCTTAAATGCAGGGAATGCCCTGGCGAAGTTAAGGAGGCGATATCGAGTCTGATATTTGCAGCTTCAAGGTGCGGAGAGTTTCCAGAACTTCAAGAGATTCGTCGGATTTTCGAGTTGAAGTTTGGTGCGGAGTTTGCAAGCAGTGCCATTGATTTACGCAACAACTGTGGTGTTAGTACCAAGGTGAGTTTGATACTTACCAACTGCAAGAAACGAATTAGTTGTTCGAATATATAATCTCCACTTAATAACCACAGTTTCCATATTACAGATGATTCAAAAGTTTTCAACAAAACAGCCCAGTGCCGAAACTAAACTGAAAGTGCTAAAGGAAATTGCTTCAGAAAATGGCATTCCTCTCCATTTAGAGCAAGAATCACCAATAATCATCAAGGTGAGGAAATATCTTTTTTTTTTTTTTAATTATAATGAAAAGAAACATTTCATTCATATGATAGTGAAGAGCCCCAAACATCAAAAAAGGTGATTACATAAGGGAGCGCCAATTGCTAACTAAAAAATATAAGCTTGAATGGAAAGGTGCTTTATTTTAAACTAAGAAAAAGCGATTAGAAGAGGAAAAAGTGTCACCAAAGAGCCGTATGTTCCTCACCTTGATAGAAAATGAGTGCTTCTACTTCCTAAGTTAACTTTTTAGTAAAAAATTCATCTGTTAACTGCAGGCAAAGCAAAACCAAAAGTTGGAAATCAAGAAAGAAGCAGATTTGTATAATCCTGAAGTCACAAACACCACAGATGATCTACATGAAGTTATTACAAGTGAAAAGATGGCATCGGAATTAGTGAAATCAAAGAAGTTTAAAGATGTAGCTAGTGCCACTGAAGAACCCTTCCAATCGGCAGCTTATGCAGCATTAGCAGCTAAAGCTGCAATCAACCTTTCAAAGTCCAAATCACAGGATATTGATTCAGATCATGAAGATGGCTCTCATCTACAAAAGAATGGAAAAGGCTCAGATTTGAATAGTTCTTATGAACCTAAGCTTAATACAAAAGAAGAAAGAATATCTTCCTGTAAGATTGACTATTCAGACGACAGATTTAGTTTTGAAAAGATTTGTCCTGTTGAACTTGAAAGTTGCAGTTCTCAATATGAAGATGCTGACATGGAAGAAACCAATCAAGAAGAGTTACCAAAAGAACCTGCCAAAGAAAGCACATCCTTTGCTCTAAAAGATTCAGATGTTAACAATATGAAGGAGCAATCATCAAAACCAAATTCAATCTTCTACAACGAGTCAGACGGCGACAAGATAACCAATACAGATAATGAAGTTGCCAGTGGAAAAGAAATTTCAGAAGAAGATATAAGAGTTCACGAATCAAAGTAAATTTATTGGCTAGTCACATCTAGATTGGAAGGAAACGTGTAGTGAAACTTTTGGACCCAGTATACGATCAGTAGTTTCTTATTTCTCAATAAAAGGGTACGAACAATTTTGCTAGGACAGACATGTAAACATTATTATATTTTCAGAGATTGTTATTCGAGTACAATACATTTATATGGTTGAAAATAATGTAACTAATACTAGGATAGATAGCAAAGAAATTT

Coding sequence (CDS)

ATGATTCAAAAGTTTTCAACAAAACAGCCCAGTGCCGAAACTAAACTGAAAGTGCTAAAGGAAATTGCTTCAGAAAATGGCATTCCTCTCCATTTAGAGCAAGAATCACCAATAATCATCAAGGCAAAGCAAAACCAAAAGTTGGAAATCAAGAAAGAAGCAGATTTGTATAATCCTGAAGTCACAAACACCACAGATGATCTACATGAAGTTATTACAAGTGAAAAGATGGCATCGGAATTAGTGAAATCAAAGAAGTTTAAAGATGTAGCTAGTGCCACTGAAGAACCCTTCCAATCGGCAGCTTATGCAGCATTAGCAGCTAAAGCTGCAATCAACCTTTCAAAGTCCAAATCACAGGATATTGATTCAGATCATGAAGATGGCTCTCATCTACAAAAGAATGGAAAAGGCTCAGATTTGAATAGTTCTTATGAACCTAAGCTTAATACAAAAGAAGAAAGAATATCTTCCTGTAAGATTGACTATTCAGACGACAGATTTAGTTTTGAAAAGATTTGTCCTGTTGAACTTGAAAGTTGCAGTTCTCAATATGAAGATGCTGACATGGAAGAAACCAATCAAGAAGAGTTACCAAAAGAACCTGCCAAAGAAAGCACATCCTTTGCTCTAAAAGATTCAGATGTTAACAATATGAAGGAGCAATCATCAAAACCAAATTCAATCTTCTACAACGAGTCAGACGGCGACAAGATAACCAATACAGATAATGAAGTTGCCAGTGGAAAAGAAATTTCAGAAGAAGATATAAGAGTTCACGAATCAAAGTAA

Protein sequence

MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCSSQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKITNTDNEVASGKEISEEDIRVHESK

Homology

[Close]

BLAST of Cucsat.G15416.T2 vs. NCBI nr
Match: KAE8650574.1 (hypothetical protein Csa_010018 [Cucumis sativus])

HSP 1 Score: 488 bits (1255), Expect = 8.45e-172
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 60
           MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE
Sbjct: 85  MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 144

Query: 61  VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 120
           VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ
Sbjct: 145 VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 204

Query: 121 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 180
           DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES
Sbjct: 205 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 264

Query: 181 CSSQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKIT 240
           CSSQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKIT
Sbjct: 265 CSSQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKIT 324

Query: 241 NTDNEVASGKEISEEDIRVHESK 263
           NTDNEVASGKEISEEDIRVHESK
Sbjct: 325 NTDNEVASGKEISEEDIRVHESK 347

[Close]

BLAST of Cucsat.G15416.T2 vs. NCBI nr
Match: XP_011651369.1 (uncharacterized protein LOC105434874 [Cucumis sativus])

HSP 1 Score: 488 bits (1255), Expect = 1.08e-170
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 60
           MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE
Sbjct: 157 MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 216

Query: 61  VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 120
           VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ
Sbjct: 217 VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 276

Query: 121 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 180
           DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES
Sbjct: 277 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 336

Query: 181 CSSQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKIT 240
           CSSQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKIT
Sbjct: 337 CSSQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKIT 396

Query: 241 NTDNEVASGKEISEEDIRVHESK 263
           NTDNEVASGKEISEEDIRVHESK
Sbjct: 397 NTDNEVASGKEISEEDIRVHESK 419

[Close]

BLAST of Cucsat.G15416.T2 vs. NCBI nr
Match: KAA0063421.1 (putative Regulator of Vps4 activity in the MVB pathway protein [Cucumis melo var. makuwa] >TYK11683.1 putative Regulator of Vps4 activity in the MVB pathway protein [Cucumis melo var. makuwa])

HSP 1 Score: 389 bits (1000), Expect = 4.94e-132
Identity = 218/264 (82.58%), Postives = 231/264 (87.50%), Query Frame = 0


Query: 1   MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 60
           MIQKFSTKQP+AETKLKVLKEIASENGIPL+LE+E PIIIK K NQKLE+KKEADLYNPE
Sbjct: 157 MIQKFSTKQPTAETKLKVLKEIASENGIPLNLEEEPPIIIKEKLNQKLEVKKEADLYNPE 216

Query: 61  VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 120
           VTNTTDDLHEVITSEK+ASELVK+KKFKDVASA EE FQSAA A       IN  KS+SQ
Sbjct: 217 VTNTTDDLHEVITSEKLASELVKAKKFKDVASAAEEAFQSAAKA-------INFLKSESQ 276

Query: 121 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 180
           DIDSDHEDGSHLQKNGK S+LNSSYE KLNTKE  I S KIDYSDDRF FEKICPV LES
Sbjct: 277 DIDSDHEDGSHLQKNGKSSELNSSYESKLNTKEASIPSSKIDYSDDRFGFEKICPVGLES 336

Query: 181 CSSQYEDADMEETNQEELPKEPAKESTSFALK-DSDVNNMKEQSSKPNSIFYNESDGDKI 240
           CSSQYEDADMEETNQEELPKEPA ESTS  L   SD+NN KEQSS+PNS FYNESDGDKI
Sbjct: 337 CSSQYEDADMEETNQEELPKEPAIESTSSVLNLSSDINNTKEQSSEPNSTFYNESDGDKI 396

Query: 241 TNTDNEVASGKEISEEDIRVHESK 263
            + DNEVASGKEISEE+I+VHESK
Sbjct: 397 ISKDNEVASGKEISEENIKVHESK 413

[Close]

BLAST of Cucsat.G15416.T2 vs. NCBI nr
Match: XP_008461584.1 (PREDICTED: uncharacterized protein LOC103500154 [Cucumis melo])

HSP 1 Score: 387 bits (995), Expect = 2.84e-131
Identity = 217/264 (82.20%), Postives = 231/264 (87.50%), Query Frame = 0


Query: 1   MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 60
           MIQKFSTKQP+AETKLKVLKEIASENGIPL+LE+E PII+K K NQKLE+KKEADLYNPE
Sbjct: 157 MIQKFSTKQPTAETKLKVLKEIASENGIPLNLEEEPPIIVKEKLNQKLEVKKEADLYNPE 216

Query: 61  VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 120
           VTNTTDDLHEVITSEK+ASELVK+KKFKDVASA EE FQSAA A       IN  KS+SQ
Sbjct: 217 VTNTTDDLHEVITSEKLASELVKAKKFKDVASAAEEAFQSAAKA-------INFLKSESQ 276

Query: 121 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 180
           DIDSDHEDGSHLQKNGK S+LNSSYE KLNTKE  I S KIDYSDDRFSFEKICPV LES
Sbjct: 277 DIDSDHEDGSHLQKNGKSSELNSSYESKLNTKEASIPSSKIDYSDDRFSFEKICPVGLES 336

Query: 181 CSSQYEDADMEETNQEELPKEPAKESTSFALK-DSDVNNMKEQSSKPNSIFYNESDGDKI 240
           CSSQYEDADMEETNQEELPKEPA ESTS  L   SD+NN KEQSS+PNS FYNESDGDKI
Sbjct: 337 CSSQYEDADMEETNQEELPKEPAIESTSSVLNLCSDINNTKEQSSEPNSTFYNESDGDKI 396

Query: 241 TNTDNEVASGKEISEEDIRVHESK 263
            + DNEVASGKEISEE+I+VHE K
Sbjct: 397 ISKDNEVASGKEISEENIKVHEPK 413

[Close]

BLAST of Cucsat.G15416.T2 vs. NCBI nr
Match: XP_038875575.1 (uncharacterized protein LOC120067980 isoform X2 [Benincasa hispida])

HSP 1 Score: 355 bits (912), Expect = 1.33e-118
Identity = 205/264 (77.65%), Postives = 225/264 (85.23%), Query Frame = 0


Query: 1   MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 60
           MIQKFSTKQPSAETKLKVLKEIASENGI  HLE+E  IIIK K NQKLE K+ ADL NPE
Sbjct: 157 MIQKFSTKQPSAETKLKVLKEIASENGITQHLEEEPAIIIKEKLNQKLEAKEAADLDNPE 216

Query: 61  VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 120
           V NTTD+LHEVITS++ A E VK+KKFKDVASAT+E FQSAAYAALAAKAAI LSKS++Q
Sbjct: 217 VINTTDNLHEVITSDESALESVKAKKFKDVASATQEAFQSAAYAALAAKAAITLSKSEAQ 276

Query: 121 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 180
           DIDSDHEDGSHLQ + K SDL+SS+EPKLNTKE  I S KIDYSDDRFSFEKICP ELES
Sbjct: 277 DIDSDHEDGSHLQTDEKSSDLDSSHEPKLNTKEASIPSSKIDYSDDRFSFEKICPAELES 336

Query: 181 CSSQYEDADMEETNQEELPKEPAKE-STSFALKDSDVNNMKEQSSKPNSIFYNESDGDKI 240
           CSS+YEDADM E+NQ ELPKE AKE  +S  + DSD++NMKEQSSK NSIFYNE +GDKI
Sbjct: 337 CSSEYEDADMAESNQIELPKETAKEIMSSVLILDSDISNMKEQSSKLNSIFYNEPEGDKI 396

Query: 241 TNTDNEVASGKEISEEDIRVHESK 263
              +NEVAS  EISE DIRVHESK
Sbjct: 397 IGKENEVASKNEISE-DIRVHESK 419

[Close]

BLAST of Cucsat.G15416.T2 vs. ExPASy TrEMBL
Match: A0A0A0L6Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271380 PE=3 SV=1)

HSP 1 Score: 488 bits (1255), Expect = 5.25e-171
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 60
           MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE
Sbjct: 157 MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 216

Query: 61  VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 120
           VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ
Sbjct: 217 VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 276

Query: 121 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 180
           DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES
Sbjct: 277 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 336

Query: 181 CSSQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKIT 240
           CSSQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKIT
Sbjct: 337 CSSQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKIT 396

Query: 241 NTDNEVASGKEISEEDIRVHESK 263
           NTDNEVASGKEISEEDIRVHESK
Sbjct: 397 NTDNEVASGKEISEEDIRVHESK 419

[Close]

BLAST of Cucsat.G15416.T2 vs. ExPASy TrEMBL
Match: A0A5D3CIE3 (Putative Regulator of Vps4 activity in the MVB pathway protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00600 PE=3 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 2.39e-132
Identity = 218/264 (82.58%), Postives = 231/264 (87.50%), Query Frame = 0


Query: 1   MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 60
           MIQKFSTKQP+AETKLKVLKEIASENGIPL+LE+E PIIIK K NQKLE+KKEADLYNPE
Sbjct: 157 MIQKFSTKQPTAETKLKVLKEIASENGIPLNLEEEPPIIIKEKLNQKLEVKKEADLYNPE 216

Query: 61  VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 120
           VTNTTDDLHEVITSEK+ASELVK+KKFKDVASA EE FQSAA A       IN  KS+SQ
Sbjct: 217 VTNTTDDLHEVITSEKLASELVKAKKFKDVASAAEEAFQSAAKA-------INFLKSESQ 276

Query: 121 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 180
           DIDSDHEDGSHLQKNGK S+LNSSYE KLNTKE  I S KIDYSDDRF FEKICPV LES
Sbjct: 277 DIDSDHEDGSHLQKNGKSSELNSSYESKLNTKEASIPSSKIDYSDDRFGFEKICPVGLES 336

Query: 181 CSSQYEDADMEETNQEELPKEPAKESTSFALK-DSDVNNMKEQSSKPNSIFYNESDGDKI 240
           CSSQYEDADMEETNQEELPKEPA ESTS  L   SD+NN KEQSS+PNS FYNESDGDKI
Sbjct: 337 CSSQYEDADMEETNQEELPKEPAIESTSSVLNLSSDINNTKEQSSEPNSTFYNESDGDKI 396

Query: 241 TNTDNEVASGKEISEEDIRVHESK 263
            + DNEVASGKEISEE+I+VHESK
Sbjct: 397 ISKDNEVASGKEISEENIKVHESK 413

[Close]

BLAST of Cucsat.G15416.T2 vs. ExPASy TrEMBL
Match: A0A1S3CEY6 (uncharacterized protein LOC103500154 OS=Cucumis melo OX=3656 GN=LOC103500154 PE=3 SV=1)

HSP 1 Score: 387 bits (995), Expect = 1.37e-131
Identity = 217/264 (82.20%), Postives = 231/264 (87.50%), Query Frame = 0


Query: 1   MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 60
           MIQKFSTKQP+AETKLKVLKEIASENGIPL+LE+E PII+K K NQKLE+KKEADLYNPE
Sbjct: 157 MIQKFSTKQPTAETKLKVLKEIASENGIPLNLEEEPPIIVKEKLNQKLEVKKEADLYNPE 216

Query: 61  VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 120
           VTNTTDDLHEVITSEK+ASELVK+KKFKDVASA EE FQSAA A       IN  KS+SQ
Sbjct: 217 VTNTTDDLHEVITSEKLASELVKAKKFKDVASAAEEAFQSAAKA-------INFLKSESQ 276

Query: 121 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 180
           DIDSDHEDGSHLQKNGK S+LNSSYE KLNTKE  I S KIDYSDDRFSFEKICPV LES
Sbjct: 277 DIDSDHEDGSHLQKNGKSSELNSSYESKLNTKEASIPSSKIDYSDDRFSFEKICPVGLES 336

Query: 181 CSSQYEDADMEETNQEELPKEPAKESTSFALK-DSDVNNMKEQSSKPNSIFYNESDGDKI 240
           CSSQYEDADMEETNQEELPKEPA ESTS  L   SD+NN KEQSS+PNS FYNESDGDKI
Sbjct: 337 CSSQYEDADMEETNQEELPKEPAIESTSSVLNLCSDINNTKEQSSEPNSTFYNESDGDKI 396

Query: 241 TNTDNEVASGKEISEEDIRVHESK 263
            + DNEVASGKEISEE+I+VHE K
Sbjct: 397 ISKDNEVASGKEISEENIKVHEPK 413

[Close]

BLAST of Cucsat.G15416.T2 vs. ExPASy TrEMBL
Match: A0A6J1J838 (uncharacterized protein LOC111482134 OS=Cucurbita maxima OX=3661 GN=LOC111482134 PE=3 SV=1)

HSP 1 Score: 251 bits (640), Expect = 2.96e-78
Identity = 162/266 (60.90%), Postives = 191/266 (71.80%), Query Frame = 0


Query: 1   MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 60
           MIQKFSTKQP+AETKLKVLKEIASENGI LHLE+E  I+IK   NQKLE KK ADL NPE
Sbjct: 157 MIQKFSTKQPNAETKLKVLKEIASENGITLHLEEEPAIVIKV--NQKLETKKSADLDNPE 216

Query: 61  VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 120
           V NTTD+ HEVI SE+ ASE V++KKFKD ASA +E FQSAAYAALAAKAAI LS+S+SQ
Sbjct: 217 VINTTDNPHEVIMSEETASESVRAKKFKDAASAAQEAFQSAAYAALAAKAAIELSRSESQ 276

Query: 121 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 180
           DI        H+++  + SDL SS+EPK+N                        P ELES
Sbjct: 277 DI--------HIEE--RNSDLESSHEPKIN------------------------PDELES 336

Query: 181 CSSQYEDADMEETNQEELPKEPAKE-STSFALKDSDVNNMKEQSS--KPNSIFYNESDGD 240
           CSS+YED D  E+NQEELP+EPAKE   S    DSD++NMKE+SS  KPNSI +NE + D
Sbjct: 337 CSSEYEDQDAAESNQEELPEEPAKEIMLSDPNLDSDISNMKEKSSSSKPNSISHNEPESD 386

Query: 241 KITNTDNEVASGKEISEEDIRVHESK 263
           K+T+ ++EV S  +ISEEDIRV ESK
Sbjct: 397 KLTSKEDEVVSKNKISEEDIRVEESK 386

[Close]

BLAST of Cucsat.G15416.T2 vs. ExPASy TrEMBL
Match: A0A6J1F3M1 (uncharacterized protein LOC111441867 OS=Cucurbita moschata OX=3662 GN=LOC111441867 PE=3 SV=1)

HSP 1 Score: 247 bits (630), Expect = 9.48e-77
Identity = 160/266 (60.15%), Postives = 189/266 (71.05%), Query Frame = 0


Query: 1   MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPE 60
           MIQKFSTKQP+AETKLKVLKEIASENGI LHLE+E  I+IK   NQK+E KK ADL NPE
Sbjct: 157 MIQKFSTKQPNAETKLKVLKEIASENGITLHLEEEPAIVIKV--NQKMETKKSADLDNPE 216

Query: 61  VTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQ 120
           V NTTD+ HEVI SE++ASE V+ KKFKD ASA +E FQSAAYAALAAKAAI LS+S+SQ
Sbjct: 217 VMNTTDNPHEVIMSEEIASESVREKKFKDAASAAKEAFQSAAYAALAAKAAIELSRSESQ 276

Query: 121 DIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELES 180
           DI        H+++  + SDL SS+EPK+N                        P ELES
Sbjct: 277 DI--------HIEE--RNSDLESSHEPKIN------------------------PDELES 336

Query: 181 CSSQYEDADMEETNQEELPKEPAKE-STSFALKDSDVNNMKEQSS--KPNSIFYNESDGD 240
           CSS+YED D  E+NQEE P+EPAKE   S    DSDV+N+KEQSS  KPNSI +NE + D
Sbjct: 337 CSSEYEDQDAAESNQEEFPEEPAKEIMLSDPNLDSDVSNLKEQSSSSKPNSISHNEPESD 386

Query: 241 KITNTDNEVASGKEISEEDIRVHESK 263
           K+ + ++EV S  +ISEEDIRV ESK
Sbjct: 397 KLMSKEDEVVSKNKISEEDIRVEESK 386

The following BLAST results are available for this feature:

BLAST of Cucsat.G15416.T2 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G15416.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650574.1	8.45e-172	100.00	hypothetical protein Csa_010018 [Cucumis sativus]	[more]
XP_011651369.1	1.08e-170	100.00	uncharacterized protein LOC105434874 [Cucumis sativus]	[more]
KAA0063421.1	4.94e-132	82.58	putative Regulator of Vps4 activity in the MVB pathway protein [Cucumis melo var...	[more]
XP_008461584.1	2.84e-131	82.20	PREDICTED: uncharacterized protein LOC103500154 [Cucumis melo]	[more]
XP_038875575.1	1.33e-118	77.65	uncharacterized protein LOC120067980 isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G15416.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6Y2	5.25e-171	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271380 PE=3 SV=1	[more]
A0A5D3CIE3	2.39e-132	82.58	Putative Regulator of Vps4 activity in the MVB pathway protein OS=Cucumis melo v...	[more]
A0A1S3CEY6	1.37e-131	82.20	uncharacterized protein LOC103500154 OS=Cucumis melo OX=3656 GN=LOC103500154 PE=...	[more]
A0A6J1J838	2.96e-78	60.90	uncharacterized protein LOC111482134 OS=Cucurbita maxima OX=3661 GN=LOC111482134...	[more]
A0A6J1F3M1	9.48e-77	60.15	uncharacterized protein LOC111441867 OS=Cucurbita moschata OX=3662 GN=LOC1114418...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..247
None	No IPR available	PANTHER	PTHR12161:SF65	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN IST1-RELATED	coord: 1..258
IPR005061	Vacuolar protein sorting-associated protein Ist1	PANTHER	PTHR12161	IST1 FAMILY MEMBER	coord: 1..258

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G15416	Cucsat.G15416	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15416.T2.E1	Cucsat.G15416.T2.E1	exon
Cucsat.G15416.T2.E2	Cucsat.G15416.T2.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15416.T2.C2	Cucsat.G15416.T2.C2	CDS
Cucsat.G15416.T2.C1	Cucsat.G15416.T2.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15416.T2	Cucsat.G15416.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport