Cucsat.G15384.T12 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G15384.T12
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	RNA-binding KH domain-containing protein
Location	ctg2009: 2790201 .. 2796009 (-)
RNA-Seq Expression	Cucsat.G15384.T12
Synteny	Cucsat.G15384.T12

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTATTATAATCATAACTTCTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTTCTTCCTTGTCTTCATCTTCTTCATCTCCTTCTAGGGTTTGTAATTTCAACAGTCATACAGACATCCACAAGCACAAACACGGATTTGAAGGAACGGAGTGAGTTCTGAGGTTATATTTTGTTTCAATTTCTTTTGGGTTACAACACAGGAATCTGACCTACTTACAGATATTGAACCTACCAACCCCTTTTACTCCACCAGATTGATAACATTAATAGAAAATCAAACCCATTGACATCGAATTTGTTCTTCTATGACTGTAATTGGAAACAACTAAACTGGGTCCAACACCAAAACCCTAACATTTTTTTAGATATGGAGAAGTCTAGATCTAAGAGGAATTACTACTATGACCACCAAGACTTTGATTCCGACTCGATGGGTAGAACCAGACCTCGTTACAACAACAATCACTACCCCAATAATAATTATCGTCATCGTGGAAATGCTGTTCGACCCTCTAAACCTCAAGACCAATCTCTTATGGTCACCACTACTTACAGGATACTTTGTCATGATGCTAAAGCTGGAGGAGTTATTGGCAAATCTGGTAGTATTATTAAGTCTATAAGGCAGCATACCGGCGCGTGGATCAACGTGCATGAGCTTGTTCCTGGTGATGAGGAGAGAATAATTGAGATTTCGGACACTCGCCGGCGGGACCCGGAAGGTCGGATGCCTTCGTTCTCTCCGGCTCAAGAAGCGCTTTTTTTGATTCATGAAAGGATTCTTGAGAGTGAAATGAGTCCTGGGTTTAATGGAATGGGTTATGGTCCTGAGGATGAGGAGGATGATTATGGTGGTGTTAGAGGAGGAGGTGGTGGCGGTTGCGGTGGACGTGTGGCCACGAGGCTTGTTGTGTCTAGAATGCACGTTGGTTGTTTGCTTGGGAAGGGAGGGAAGATAATCGAGCAAATGAGGATGGAAACCAAGACCCAGATAAGGATTCTACCTAGAGATCACAATTTGCCTCGTTGCATTTCAATGTCGGAGGAGATTGTTCAGGTTTAGTTTCTGAACACTTCAGTATCTTGAAAAAGTACCTGATTTCTTGTTGCTAAGATGATTTAAAACTTATTCAGCTTGGAATTCCTTTTGATTCAAGCTGACTCCTCTACCTCTTCCTCAGTCCGGGTGATTCTACTCATTCCGGGTCAGGTTCAAAGGACGCTAATTTACTTTTTGGATGCTTAACCGAAGTTGCAAATTGATTGCTTAGAAGTTAGAACATGTTGGAACGTTTAATATGACAATACTCTACTATCAGCAGTTTAATAATGAAGTGACGGGTTCTTTATGTTTGCTGCTGTCCTGTAATCACTTCACTAGCTATTTGAGAAACTAATTGAGTTCGAGCTGAAATCATGTGTTCAGAACTCATCAAATTTGTTTCGTACTGCACATCTTACTCGATGGGTGTGTTTAAAAAAGCTAGTCAAATTTTCAGCAACTTTTTCTTTCTGGACGTCTAGTCTATCTTGCATATTTAATTTGTTTGATCTTTTCATCTCCTGATTCCTATTGTTGAATTAACTTATTGTTGCATTGGTAATGCTATGCTATATACAATGTCCACGAAGTCTGTTCCTTTCATTTCTAGTTTATCTATTTGTCAGGATGGCGGTCTACAGTTTTAACTTGCCCTTGATATAGTTTGAACTTGTTAAATATTCAGTAAAGATATAAGAGATTGTAGTCTCTCATTTTGTTGTATCTTTGCTTATATGAGCATGCAGTCTTTAGCTGGTTGCTTAAGTTCTAGTATTTCACAGATAGAAGGTTTAAAAGCTGTATTGAAATAACTTATACAAGGCTTGTGGTATAATCTATTAGATGTGCATCGGAATTCCAATTTTTGGTGCCAAGTTCGACCCTTCTTCCATCTATGATAACTAACTAACCATAACTTAAACACGACCACTGTCTTGATGCAGAATGAATTAGGGAAAAAGATATGGTGACAGGAAAAACTTAAGTTTCTTTTTGTCTAAGTTTTATGACTTCAATGTTCCATTTGTTGAATTACGAAGAACATACATGTACTAATTACTTTCCCTATCGGGTTTATAACCCTTTGTAGATTGTTGGGGATACAAATGCCGTTAAAAAAGCTATAGCCATTGTTTCATCACGCTTGAGAGAGAGTCAGCATCGTGACCGTAGTCATTTCCATGGGCGTCTACATTCACCGGAGCGCATTTTCCCTCCTGAAGATGATTATGTTCCACATAACGCACGGCGGTTACCAATGGATGGGCGGCCATTTAGACCACGCATGTCTGCTTCTAATACAAGAGGCAATGACTATTCCAGCCGTCAGTCTAATTTTATGGTGGAGCCCGGGGCTGCTCCTGTAAATGACAACATGATGCCCTTTTATGGCGAGGACCTTGTATTTAAAATATTATGCCCAATTGAGAAGGTAGATAGTGTTATTGGAGAGTCTAATGGAATCATAGAATTGCTTCGTAACGATGTTGGTGTGGATATCAAGGTTTCTGATCCTGTGACCGGTTCAAACGAACAAATTCTTATCATTTCCTCGGATGAGGTACTTCAACTTTCTTTTTCATTGTTAGTATACTTCATGATTTACTGTTCCACAAGAGTCAAATGGAATCATAGAATCACTTGAGTATGGCTCCCCTAGCAGAAGATATATATATTTGGTGTTATATAAACGACCATTTAACTGACTTTAAAAGTTATGCTTTTCATTCATTTTTTCCTTTTTTAACTTTCTGTTTGGAAAATTTGAGTTCTTAGGGTCCAGATGATGAGCTTTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCGCATTGTTGATCTTGTCCCTGACAAGGAGAACATTGTAACTACTAGGTTGCTTGTACCATCAAGTGATATTGGATGTTTGGAGGGAAGAGATGGATCATTGTTAGAGATGAAGAGATTAACCGGTGCGAATGTACATATTGTGCCAAGAGAAGACCTTCCCATGTTTGTATCAGGGGCGGATGAGCTTGTACAGGTTTGTCATTGAACTTTAAATTGATAGGAGTTCTTAGAATTTTTAAGGACGCTTAACCTAGGCTTTTTCTTGGTGTCAAAGTAAAGCTAACCACCCATTTACTCATTACAATCTATCCTTTTTATTTAGTGATTGGCAATCTCTATAGTAATTTCTTTTGTTTGGGGTTTTCCCCTTTTTTCATATCAATGAATTGTTTCCTTCACAATAAAAAAAAAAGAAAAAAAAAGAACAAAGCTTAATGTCGCTTATTTTGTATTCTTCTTATATCAGTTACGGAGCAAGGTAAAAGTTAGCTGTCTTTGAACCATTGTATATCTTGCTGGTTAGAACGGAGGCTTTTGCATTCTGATTTCCTAATTCCCCAACTGCAATTTTTGTAGATCATAGGGGACATAAAAGCAGCTCGAGATGCACTTGTTGAGTTAACATCAAGATTGCGGAATTGCCTTTATAAGGAGCCATTCCAAAAAGATGCAAGCCCTCAAGTATCAGTACAAAGCACCATGGTCAGTTTAGGACTCGAGGAATCATCTTCAAATAATAATGCTGCAGCTCGTGAAGTTCATAGTGGAAATGATTCTGCAAGCACAGCCTTTCAAAATGTGCAACCTTTTGGAACAGCACAGCTTTTAAAGGTCACTTGTTTTCTTATTTTTTCTTCTCTCTTGACAAGGTGATTCTTTCTTTTCAAAATTGCTCTCTTACAGTTAAGTAGTAAAAAAACTTAATGGAGATCCGAAGCATTCATGTTAAGCCCCTCAAGGCATAGGTCCCTAGCAATTTTATAATAGGAGTGTTTGCAAAATAGCAAAAAATTTAATGATAATAGAGCCCATGTCACGATATTTTTTAAATTGCAAAAGTAGCAAATTTAAAAGCAGATAGCTATTTGATAGCCGTCTGATATATCTAATTACTTGTTATATTTATCATATTTGCAATATGCAAAAAAGAGATGCTATAGACTGCTTTTTTCTAATTTTTTTTTATCATCTGATACAATTTCCCTTTATAAAAAACAATTTGCCAATTGTTGTTTTTAGTAGTCATATGATGGAACGACCTTACTTGAACAGGATGTGTTCTATAGGTTGTACAACTGTGTCCTTGAGTTCTAAGTAGTCATATTTGGTTCAAGTTCTAGTCTGTTGAGAATGAAAAAGTAGGGTTATTTTCTTTGCTCATGTCTACTGAAAAAAGGTGCTCCGGTCAAACTAGGTGAACATGGTTTCTATTATGGATCTTATATTTTCCTTTTGCATTATCGCATTCCTGGAGAACTCCGTAAACTATCTAGCATTTTAGTGCACAGCTCTCGTGAGACTTTGGTTATGGACCAAAATGATTTAAACTATCATTTGCAGGAAACTGGAGGATCGAGCAATGAAACTGGTACGCAGAATGAAAATGACCGACGTGAAGATTTGCCTAGTGGGTTAAATAGGTAGAACTTCATTTTTCTGTTGTGCTGATTTCTCCCCTCCCCCATTTCTTTTTGATTAATGATTTGTTAGTTATAAATCATTCCATCGTCTAATCCTTCCTCTCTTTTACATGCTTCTCTTGTCCTTAGTTTGTTCTGCTCCTTTTATAAGTTAGATCAATAACTGTTCGTTCACCTCTTAGGATCCCTGTGCCGCTTGTCACCCGGAGTACGCTCGAAGTTGTGATACCAGAGCCTGCAGTCCCTAAGCTTATAACAAAATCAAAAAACAAGCTTGCTCAGATCAGTGAGGTAGTATTGGTGAAATTTTGTCAAACCATTCATGCAATATATTAGAAAACTGCCTTATTGGGTGATGATTTTGGGTTTAACAGTTATCCGGAGCCAATGTTACGTTGGTAGAAGATAGACCAGATGTAACCCAGAAGATAATTCAAATATCAGGCACACCGGAGCAAGCTGAGAGAGCCCAGAGCTTGTTGCAAGGCTTTATTTTGAGCTGTAAGTCTCTCACTAACCCATTTTTAGTTGTAGCTTAATCTCTGAGAAAATTTTGAAAACATCCCTAAAATATTTTCATCTTTCCCAACTAGCCCTTTTGAAAAACTCATTGAAATAGTTTTTCTCGATTCAAATAAACATTTGACTTCTTTTTGTCATCGTACATCCAAACTAACAGTGTATTGGCAAAATAAAAAGGTGCTAAAGATGAAAACTTTTGGAGGTTATTTCTTACAAATTTCCGGACTTTTTCCTTTGTATTCATCTATTCTTTTAACATTTTTCAGTGCAAGAAGATGGGCCATAAGTTGTGGCCATTTGGTTCTACACACTAAACTTTATTTGGCCATAAAAGGTTGGTTATTGCCCCCATGAAGATCAACTGTTGTAGTATCCGGGGGGGCTCTTGCTCTCTTTTCAGCTGTTTGATTCTTTTTTTTCTTTCTGGAAGAGCCATACAAGAAGATGGAGCACGATTAACCATTGCCATGTAAATTTTAAATGTATAAGAGTTTTCATTCTTCTTCCTTCGCAGTTCCACAAATATTCATGTCTGTAGGAAGCAATTTCAGTATCATTTATCCCAATAGTTATTGAAATCTAATTTTTATTAGCTGTTAGTTCTTGTTAAGTTTTATTTTGTCAATCATCATAGGTAAAGTGAAAATTTATTCCATTTCATGGTTGTGTAGTTTCGCTTTTAAATTTTGAATTGGAATTTTATATAATTTCTAACACAAATTTATAAGTTTCCCCCCTCTTTTTATTTTTATTTT

Coding sequence (CDS)

ATGGATGGGCGGCCATTTAGACCACGCATGTCTGCTTCTAATACAAGAGGCAATGACTATTCCAGCCGTCAGTCTAATTTTATGGTGGAGCCCGGGGCTGCTCCTGTAAATGACAACATGATGCCCTTTTATGGCGAGGACCTTGTATTTAAAATATTATGCCCAATTGAGAAGGTAGATAGTGTTATTGGAGAGTCTAATGGAATCATAGAATTGCTTCGTAACGATGTTGGTGTGGATATCAAGGTTTCTGATCCTGTGACCGGTTCAAACGAACAAATTCTTATCATTTCCTCGGATGAGGGTCCAGATGATGAGCTTTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCGCATTGTTGATCTTGTCCCTGACAAGGAGAACATTGTAACTACTAGGTTGCTTGTACCATCAAGTGATATTGGATGTTTGGAGGGAAGAGATGGATCATTGTTAGAGATGAAGAGATTAACCGGTGCGAATGTACATATTGTGCCAAGAGAAGACCTTCCCATGTTTGTATCAGGGGCGGATGAGCTTGTACAGATCATAGGGGACATAAAAGCAGCTCGAGATGCACTTGTTGAGTTAACATCAAGATTGCGGAATTGCCTTTATAAGGAGCCATTCCAAAAAGATGCAAGCCCTCAAGTATCAGTACAAAGCACCATGGTCAGTTTAGGACTCGAGGAATCATCTTCAAATAATAATGCTGCAGCTCGTGAAGTTCATAGTGGAAATGATTCTGCAAGCACAGCCTTTCAAAATGTGCAACCTTTTGGAACAGCACAGCTTTTAAAGGAAACTGGAGGATCGAGCAATGAAACTGGTACGCAGAATGAAAATGACCGACGTGAAGATTTGCCTAGTGGGTTAAATAGGATCCCTGTGCCGCTTGTCACCCGGAGTACGCTCGAAGTTGTGATACCAGAGCCTGCAGTCCCTAAGCTTATAACAAAATCAAAAAACAAGCTTGCTCAGATCAGTGAGTTATCCGGAGCCAATGTTACGTTGGTAGAAGATAGACCAGATGTAACCCAGAAGATAATTCAAATATCAGGCACACCGGAGCAAGCTGAGAGAGCCCAGAGCTTGTTGCAAGGCTTTATTTTGAGCTTGCAAGAAGATGGGCCATAA

Protein sequence

MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSLQEDGP

Homology

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BLAST of Cucsat.G15384.T12 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 7.3e-105
Identity = 214/376 (56.91%), Postives = 277/376 (73.67%), Query Frame = 0


Query: 9   RMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVDSVIGESNG 68
           R    N R N++SSRQSN+  E  A PV +N+   Y E+LVF+ILCP +K+  V+GES G
Sbjct: 289 RFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV---YSEELVFQILCPADKIVRVVGESQG 348

Query: 69  IIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDK 128
           II+LL+N++GVD++VSDPV GS+EQI+ ISS+E PDD  FPAQEALLHIQT+I+DL+PDK
Sbjct: 349 IIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIPDK 408

Query: 129 ENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGD 188
           +N++TTRLLVPS D  CLEG+ GS+ E+ RLTG +V I+ RE++P   S  D ++QI G+
Sbjct: 409 DNLITTRLLVPSRDSICLEGKAGSVSEISRLTGTSVQILAREEIPRCASINDVVIQITGE 468

Query: 189 IKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLG----LEESSSNNNAAARE 248
           I+AAR+ALVELT  LR+ ++KE  QK+ +P  S  +T    G    +E +SSNN   +RE
Sbjct: 469 IRAAREALVELTLLLRSHMFKELSQKE-TPPASTSTTGPLEGVAGVMEVASSNNTIQSRE 528

Query: 249 VHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTR 308
              G  S++   Q V         KE  GS  + G   E++ RE++P   +R+ VPLVTR
Sbjct: 529 ---GPTSSNLNLQQVSTI--LPQFKEGFGSVAKAG---ESEHREEVPVTTSRMAVPLVTR 588

Query: 309 STLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERA 368
           STLEVV+PE  VPKL+TKS+NKLAQISE SGA+VT+VEDRP+ TQ II+ISGTPEQAERA
Sbjct: 589 STLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQAERA 648

Query: 369 QSLLQGFILSLQEDGP 381
           QSLLQGFILS+QEDGP
Sbjct: 649 QSLLQGFILSIQEDGP 652

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BLAST of Cucsat.G15384.T12 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.8e-32
Identity = 111/398 (27.89%), Postives = 191/398 (47.99%), Query Frame = 0


Query: 46  EDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDD 105
           +D+VFKILC  E    VIG    ++ +L ++ G  I V + +    E+++ +++ E P+ 
Sbjct: 450 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPEC 509

Query: 106 ELFPAQEALLHIQTRIVDLVPDK------ENIVTTRLLVPSSDIGCLEGRDGSLL-EMKR 165
           +  PAQ+A++ I +R+ +L  +K       + +T RL+VP+S IGC+ G+ G ++ EM++
Sbjct: 510 QSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRK 569

Query: 166 LTGANVHIVPREDLPMFVSGADELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASP 225
            TGA + I+  E  P  +S  D++VQI G+    R+A+  +TSRLR+ ++    +   + 
Sbjct: 570 TTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAK 629

Query: 226 QVSVQST----------MVSLGLEESSSNNNAAAREVH--------SGNDSASTAFQNV- 285
             S  +T           +S+G  +S SN    +  +H        SG+ S+    ++V 
Sbjct: 630 SSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVG 689

Query: 286 --------QPFGTAQLLKETGGSSNETG---TQNENDRREDL---PSGLNRIPVP----- 345
                    PF        + G S+  G   T + +D    L   PS L   P P     
Sbjct: 690 TDPYIRPEDPF--PDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRG 749

Query: 346 ------------------------LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGA 375
                                   +VT +T+E+ +P  A+  +  +    L Q+ ++SGA
Sbjct: 750 LSDASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGA 809

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BLAST of Cucsat.G15384.T12 vs. ExPASy Swiss-Prot
Match: P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.4e-25
Identity = 99/332 (29.82%), Postives = 163/332 (49.10%), Query Frame = 0


Query: 46  EDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVT--GSNEQILIISSDEGP 105
           E+LVFK+LCP+  +  VIG+    I+ +R   G  I+V+D  T  G +E ++I+++ E P
Sbjct: 310 EELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESP 369

Query: 106 DDELFPAQEALLHIQTRIVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLL-EMKRLTGA 165
           DD    A EA+L +Q  I D   D EN V  +LLV S  IGC+ G+ GS++ E+++ T A
Sbjct: 370 DDMKSMAVEAVLLLQEYIND--EDAEN-VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNA 429

Query: 166 NVHIVPREDLPMFVSGADELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSV 225
           N+ I   +         D+LV++ G++ + RDAL+++  RLR  +               
Sbjct: 430 NICISKGK--------KDDLVEVSGEVSSVRDALIQIVLRLREDV--------------- 489

Query: 226 QSTMVSLGLEESSSNNNAAAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQN 285
                 LG ++S +     AR  +    S S+      P   + +   +G     +    
Sbjct: 490 ------LGDKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFMSSMASTSGFHGYGSFPAG 549

Query: 286 ENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVE 345
           +N      P    R+P    + S LE++IP  A+ K++ K    L  I  +SGA + +  
Sbjct: 550 DNVLGSTGPYSYGRLP----SSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISA 605

Query: 346 DRPDVTQKIIQISGTPEQAERAQSLLQGFILS 375
            +      I  +SGT EQ   A++L+Q F++S
Sbjct: 610 SKTSHGDHIALLSGTLEQMRCAENLVQAFVMS 605

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BLAST of Cucsat.G15384.T12 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 9.5e-20
Identity = 84/354 (23.73%), Postives = 158/354 (44.63%), Query Frame = 0


Query: 42  PFYGEDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDE 101
           P +  + VF++L P +KV S+IG    +I+ +  +    IK+ D   G+ E+ +++S  E
Sbjct: 181 PGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKE 240

Query: 102 GPDDELFPAQEALLHIQTRIVDLVPDK------ENIVTTRLLVPSSDIGCLEGRDGSLLE 161
            P+  L P+ + LL +  RIVD +  +       + V+TRLLVP+S  G L G+ G  ++
Sbjct: 241 EPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVK 300

Query: 162 -MKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARDALVELTSRLRNCL------- 221
            ++  +   V ++  EDLP+F    D +V+++G+  +   AL  + S LR  L       
Sbjct: 301 AIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIP 360

Query: 222 -YKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSASTAFQNVQPFGTAQ 281
            ++   QK       +     S G  +  + +       H+         ++   +   +
Sbjct: 361 FFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPE 420

Query: 282 LLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKNK 341
           + +         G  +   R   +   ++  P  +  + T ++ IP      +I  S + 
Sbjct: 421 MRQPPMEKQPHQGI-SAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSN 480

Query: 342 LAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSLQEDGP 381
           ++    LSGA VT+ E R    +  +++SGT  Q + A  L+Q F+       P
Sbjct: 481 ISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMAEAGAPAP 533

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BLAST of Cucsat.G15384.T12 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-17
Identity = 93/360 (25.83%), Postives = 162/360 (45.00%), Query Frame = 0


Query: 42  PFYGEDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDE 101
           P +  D VF+++ P+ KV ++IG     I+ +  +    IKV D    + ++I++IS  E
Sbjct: 68  PGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKE 127

Query: 102 GPDDELFPAQEALLHIQTRIVDLVPDKEN---------IVTTRLLVPSSDIGCLEGRDGS 161
            P+  + PA +A+L +  R+  L PD ++           + RLLV S+    L G+ GS
Sbjct: 128 EPEAYMSPAMDAVLRVFRRVSGL-PDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGS 187

Query: 162 LLE-MKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARDALVELTSRLRNCLYKEP 221
           L++ +   +GA+V I+  E+ P + +  + +V + G+      AL  +   LR  L    
Sbjct: 188 LIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVDHT 247

Query: 222 ----FQKDASPQVSVQSTMVSLGLEESS----SNN------NAAAREVHSGNDSASTAFQ 281
               F+K    +VS       L   +SS    S+N      +  AR      +  S    
Sbjct: 248 VVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERDSRVDS 307

Query: 282 NVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVP 341
            VQP G +   ++   S+  +              GL R+    VT+ +  + IP     
Sbjct: 308 RVQPSGVSIYSQDPVLSARHS-------------PGLARVSSAFVTQVSQTMQIPFSYAE 367

Query: 342 KLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSLQE 378
            +I      +A I   SGA +T +++ P   Q  ++I GT  Q + A+ L+Q FI++ +E
Sbjct: 368 DIIGVEGANIAYIRRRSGATIT-IKESPHPDQITVEIKGTTSQVQTAEQLIQEFIINHKE 412

[Close]

BLAST of Cucsat.G15384.T12 vs. NCBI nr
Match: XP_011651315.1 (RNA-binding KH domain-containing protein RCF3 isoform X1 [Cucumis sativus] >KGN57655.1 hypothetical protein Csa_009601 [Cucumis sativus])

HSP 1 Score: 731 bits (1886), Expect = 8.06e-261
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 60
           MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD
Sbjct: 287 MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 346

Query: 61  SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 120
           SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR
Sbjct: 347 SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 406

Query: 121 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 180
           IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD
Sbjct: 407 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 466

Query: 181 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 240
           ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA
Sbjct: 467 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 526

Query: 241 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 300
           AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP
Sbjct: 527 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 586

Query: 301 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 360
           LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ
Sbjct: 587 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 646

Query: 361 AERAQSLLQGFILSLQEDGP 380
           AERAQSLLQGFILSLQEDGP
Sbjct: 647 AERAQSLLQGFILSLQEDGP 666

[Close]

BLAST of Cucsat.G15384.T12 vs. NCBI nr
Match: XP_008455983.1 (PREDICTED: KH domain-containing protein At4g18375 [Cucumis melo])

HSP 1 Score: 724 bits (1869), Expect = 3.09e-258
Identity = 375/380 (98.68%), Postives = 379/380 (99.74%), Query Frame = 0


Query: 1   MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 60
           MDGRPFRPRMSASN+RGNDYS+RQSNFMVEPGAAPVNDNMMPFYGEDLVF+ILCPIEK+D
Sbjct: 287 MDGRPFRPRMSASNSRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKID 346

Query: 61  SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 120
           SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR
Sbjct: 347 SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 406

Query: 121 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 180
           IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD
Sbjct: 407 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 466

Query: 181 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 240
           ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA
Sbjct: 467 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 526

Query: 241 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 300
           AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP
Sbjct: 527 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 586

Query: 301 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 360
           LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQ
Sbjct: 587 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQ 646

Query: 361 AERAQSLLQGFILSLQEDGP 380
           AERAQSLLQGFILSLQEDGP
Sbjct: 647 AERAQSLLQGFILSLQEDGP 666

[Close]

BLAST of Cucsat.G15384.T12 vs. NCBI nr
Match: TYK11290.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 711 bits (1836), Expect = 7.82e-251
Identity = 369/374 (98.66%), Postives = 373/374 (99.73%), Query Frame = 0


Query: 1   MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 60
           MDGRPFRPRMSASN+RGNDYS+RQSNFMVEPGAAPVNDNMMPFYGEDLVF+ILCPIEK+D
Sbjct: 287 MDGRPFRPRMSASNSRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKID 346

Query: 61  SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 120
           SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR
Sbjct: 347 SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 406

Query: 121 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 180
           IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD
Sbjct: 407 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 466

Query: 181 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 240
           ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA
Sbjct: 467 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 526

Query: 241 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 300
           AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP
Sbjct: 527 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 586

Query: 301 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 360
           LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQ
Sbjct: 587 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQ 646

Query: 361 AERAQSLLQGFILS 374
           AERAQSLLQGFILS
Sbjct: 647 AERAQSLLQGFILS 660

[Close]

BLAST of Cucsat.G15384.T12 vs. NCBI nr
Match: KAA0050522.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 711 bits (1836), Expect = 9.55e-251
Identity = 369/374 (98.66%), Postives = 373/374 (99.73%), Query Frame = 0


Query: 1   MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 60
           MDGRPFRPRMSASN+RGNDYS+RQSNFMVEPGAAPVNDNMMPFYGEDLVF+ILCPIEK+D
Sbjct: 287 MDGRPFRPRMSASNSRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKID 346

Query: 61  SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 120
           SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR
Sbjct: 347 SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 406

Query: 121 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 180
           IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD
Sbjct: 407 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 466

Query: 181 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 240
           ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA
Sbjct: 467 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 526

Query: 241 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 300
           AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP
Sbjct: 527 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 586

Query: 301 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 360
           LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQ
Sbjct: 587 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQ 646

Query: 361 AERAQSLLQGFILS 374
           AERAQSLLQGFILS
Sbjct: 647 AERAQSLLQGFILS 660

[Close]

BLAST of Cucsat.G15384.T12 vs. NCBI nr
Match: XP_038891418.1 (RNA-binding KH domain-containing protein RCF3 [Benincasa hispida])

HSP 1 Score: 696 bits (1796), Expect = 3.34e-247
Identity = 362/380 (95.26%), Postives = 372/380 (97.89%), Query Frame = 0


Query: 1   MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 60
           MDGRPFRPRMSASNTRGNDYS+RQSNF+VEPGA PVNDNMMPFYGEDLVF+ILCPI+KVD
Sbjct: 286 MDGRPFRPRMSASNTRGNDYSNRQSNFLVEPGAVPVNDNMMPFYGEDLVFRILCPIDKVD 345

Query: 61  SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 120
           SVIGESNGIIELLRNDVGVDIKVSDPVTGSNE+ILIISSDEGPDDELFPAQEALLHIQTR
Sbjct: 346 SVIGESNGIIELLRNDVGVDIKVSDPVTGSNERILIISSDEGPDDELFPAQEALLHIQTR 405

Query: 121 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 180
           IVDLVPDK+NIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD
Sbjct: 406 IVDLVPDKDNIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 465

Query: 181 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 240
           ELVQIIGDIKAARDALVELTSRLRN LYKEPFQKDASP VSVQ+   SLGLEESSSNNNA
Sbjct: 466 ELVQIIGDIKAARDALVELTSRLRNYLYKEPFQKDASPPVSVQA---SLGLEESSSNNNA 525

Query: 241 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 300
            AREVHSGNDS+STA+QNVQPFGTA LLKETGGSSNETGTQNENDRREDLPSGLNRIPVP
Sbjct: 526 VAREVHSGNDSSSTAYQNVQPFGTAHLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 585

Query: 301 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 360
           LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDV+QKIIQISGTPEQ
Sbjct: 586 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVSQKIIQISGTPEQ 645

Query: 361 AERAQSLLQGFILSLQEDGP 380
           AERAQSLLQGFILSLQEDGP
Sbjct: 646 AERAQSLLQGFILSLQEDGP 662

[Close]

BLAST of Cucsat.G15384.T12 vs. ExPASy TrEMBL
Match: A0A0A0L6Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238210 PE=4 SV=1)

HSP 1 Score: 731 bits (1886), Expect = 3.90e-261
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 60
           MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD
Sbjct: 287 MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 346

Query: 61  SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 120
           SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR
Sbjct: 347 SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 406

Query: 121 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 180
           IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD
Sbjct: 407 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 466

Query: 181 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 240
           ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA
Sbjct: 467 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 526

Query: 241 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 300
           AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP
Sbjct: 527 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 586

Query: 301 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 360
           LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ
Sbjct: 587 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 646

Query: 361 AERAQSLLQGFILSLQEDGP 380
           AERAQSLLQGFILSLQEDGP
Sbjct: 647 AERAQSLLQGFILSLQEDGP 666

[Close]

BLAST of Cucsat.G15384.T12 vs. ExPASy TrEMBL
Match: A0A1S3C2V2 (KH domain-containing protein At4g18375 OS=Cucumis melo OX=3656 GN=LOC103496048 PE=4 SV=1)

HSP 1 Score: 724 bits (1869), Expect = 1.50e-258
Identity = 375/380 (98.68%), Postives = 379/380 (99.74%), Query Frame = 0


Query: 1   MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 60
           MDGRPFRPRMSASN+RGNDYS+RQSNFMVEPGAAPVNDNMMPFYGEDLVF+ILCPIEK+D
Sbjct: 287 MDGRPFRPRMSASNSRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKID 346

Query: 61  SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 120
           SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR
Sbjct: 347 SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 406

Query: 121 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 180
           IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD
Sbjct: 407 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 466

Query: 181 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 240
           ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA
Sbjct: 467 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 526

Query: 241 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 300
           AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP
Sbjct: 527 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 586

Query: 301 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 360
           LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQ
Sbjct: 587 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQ 646

Query: 361 AERAQSLLQGFILSLQEDGP 380
           AERAQSLLQGFILSLQEDGP
Sbjct: 647 AERAQSLLQGFILSLQEDGP 666

[Close]

BLAST of Cucsat.G15384.T12 vs. ExPASy TrEMBL
Match: A0A5D3CIV3 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001500 PE=4 SV=1)

HSP 1 Score: 711 bits (1836), Expect = 3.79e-251
Identity = 369/374 (98.66%), Postives = 373/374 (99.73%), Query Frame = 0


Query: 1   MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 60
           MDGRPFRPRMSASN+RGNDYS+RQSNFMVEPGAAPVNDNMMPFYGEDLVF+ILCPIEK+D
Sbjct: 287 MDGRPFRPRMSASNSRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKID 346

Query: 61  SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 120
           SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR
Sbjct: 347 SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 406

Query: 121 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 180
           IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD
Sbjct: 407 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 466

Query: 181 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 240
           ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA
Sbjct: 467 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 526

Query: 241 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 300
           AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP
Sbjct: 527 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 586

Query: 301 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 360
           LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQ
Sbjct: 587 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQ 646

Query: 361 AERAQSLLQGFILS 374
           AERAQSLLQGFILS
Sbjct: 647 AERAQSLLQGFILS 660

[Close]

BLAST of Cucsat.G15384.T12 vs. ExPASy TrEMBL
Match: A0A5A7U3Y9 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001660 PE=4 SV=1)

HSP 1 Score: 711 bits (1836), Expect = 4.62e-251
Identity = 369/374 (98.66%), Postives = 373/374 (99.73%), Query Frame = 0


Query: 1   MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 60
           MDGRPFRPRMSASN+RGNDYS+RQSNFMVEPGAAPVNDNMMPFYGEDLVF+ILCPIEK+D
Sbjct: 287 MDGRPFRPRMSASNSRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKID 346

Query: 61  SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 120
           SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR
Sbjct: 347 SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 406

Query: 121 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 180
           IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD
Sbjct: 407 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 466

Query: 181 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 240
           ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA
Sbjct: 467 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 526

Query: 241 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 300
           AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP
Sbjct: 527 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 586

Query: 301 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 360
           LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQ
Sbjct: 587 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQ 646

Query: 361 AERAQSLLQGFILS 374
           AERAQSLLQGFILS
Sbjct: 647 AERAQSLLQGFILS 660

[Close]

BLAST of Cucsat.G15384.T12 vs. ExPASy TrEMBL
Match: A0A6J1E5R0 (RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662 GN=LOC111430831 PE=4 SV=1)

HSP 1 Score: 676 bits (1743), Expect = 1.82e-239
Identity = 352/380 (92.63%), Postives = 368/380 (96.84%), Query Frame = 0


Query: 1   MDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVD 60
           MDGRPFRPR+S  NTRGNDYS+RQSNF+VEPGAA VNDNMMPFYGEDLVF+ILCPI+KVD
Sbjct: 285 MDGRPFRPRIS--NTRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVD 344

Query: 61  SVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 120
           SVIG+S+GIIELLR++VGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR
Sbjct: 345 SVIGDSDGIIELLRDEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTR 404

Query: 121 IVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGAD 180
           IVDLVPDK+NIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPRE+LPMFVSGAD
Sbjct: 405 IVDLVPDKDNIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGAD 464

Query: 181 ELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNA 240
           ELVQIIGDIKAARDA+VELTSRLRN LYKEPFQKDASP VS+ STM SLGLEESSSNNNA
Sbjct: 465 ELVQIIGDIKAARDAVVELTSRLRNYLYKEPFQKDASPPVSLPSTMGSLGLEESSSNNNA 524

Query: 241 AAREVHSGNDSASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVP 300
           AAREVHSGNDS+ TA+QNVQPFGT QLLKE GGSSNETGTQNENDRREDLPSGLNRIPVP
Sbjct: 525 AAREVHSGNDSSITAYQNVQPFGTPQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVP 584

Query: 301 LVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQ 360
           LVTRSTLEVVIPE AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQ
Sbjct: 585 LVTRSTLEVVIPEAAVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQ 644

Query: 361 AERAQSLLQGFILSLQEDGP 380
           AERAQSLLQGFILS+QEDGP
Sbjct: 645 AERAQSLLQGFILSMQEDGP 662

The following BLAST results are available for this feature:

BLAST of Cucsat.G15384.T12 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W4B1	7.3e-105	56.91	RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
F4KDN0	2.8e-32	27.89	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
P58223	3.4e-25	29.82	KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18...	[more]
Q9SR13	9.5e-20	23.73	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
Q9SZH4	1.2e-17	25.83	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cucsat.G15384.T12 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651315.1	8.06e-261	100.00	RNA-binding KH domain-containing protein RCF3 isoform X1 [Cucumis sativus] >KGN5...	[more]
XP_008455983.1	3.09e-258	98.68	PREDICTED: KH domain-containing protein At4g18375 [Cucumis melo]	[more]
TYK11290.1	7.82e-251	98.66	KH domain-containing protein [Cucumis melo var. makuwa]	[more]
KAA0050522.1	9.55e-251	98.66	KH domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_038891418.1	3.34e-247	95.26	RNA-binding KH domain-containing protein RCF3 [Benincasa hispida]	[more]

BLAST of Cucsat.G15384.T12 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6Q2	3.90e-261	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238210 PE=4 SV=1	[more]
A0A1S3C2V2	1.50e-258	98.68	KH domain-containing protein At4g18375 OS=Cucumis melo OX=3656 GN=LOC103496048 P...	[more]
A0A5D3CIV3	3.79e-251	98.66	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7U3Y9	4.62e-251	98.66	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A6J1E5R0	1.82e-239	92.63	RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 46..119 e-value: 0.65 score: 17.2 coord: 130..204 e-value: 0.25 score: 20.4 coord: 303..373 e-value: 0.0028 score: 26.9
None	No IPR available	GENE3D	3.30.310.210		coord: 46..210 e-value: 6.7E-23 score: 83.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 1..282
None	No IPR available	PANTHER	PTHR10288:SF134	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN RCF3	coord: 1..282
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 304..368 score: 12.705369
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 47..114 score: 10.001117
None	No IPR available	CDD	cd00105	KH-I	coord: 306..369 e-value: 7.36207E-10 score: 52.5623
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 303..374 e-value: 1.7E-11 score: 45.6
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 40..100
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 296..376
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 124..210
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 306..369 e-value: 2.7E-8 score: 33.5 coord: 133..198 e-value: 2.0E-5 score: 24.3

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G15384	Cucsat.G15384	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15384.T12.E1	Cucsat.G15384.T12.E1	exon
Cucsat.G15384.T12.E2	Cucsat.G15384.T12.E2	exon
Cucsat.G15384.T12.E3	Cucsat.G15384.T12.E3	exon
Cucsat.G15384.T12.E4	Cucsat.G15384.T12.E4	exon
Cucsat.G15384.T12.E5	Cucsat.G15384.T12.E5	exon
Cucsat.G15384.T12.E6	Cucsat.G15384.T12.E6	exon
Cucsat.G15384.T12.E7	Cucsat.G15384.T12.E7	exon
Cucsat.G15384.T12.E8	Cucsat.G15384.T12.E8	exon
Cucsat.G15384.T12.E9	Cucsat.G15384.T12.E9	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15384.T12.C7	Cucsat.G15384.T12.C7	CDS
Cucsat.G15384.T12.C6	Cucsat.G15384.T12.C6	CDS
Cucsat.G15384.T12.C5	Cucsat.G15384.T12.C5	CDS
Cucsat.G15384.T12.C4	Cucsat.G15384.T12.C4	CDS
Cucsat.G15384.T12.C3	Cucsat.G15384.T12.C3	CDS
Cucsat.G15384.T12.C2	Cucsat.G15384.T12.C2	CDS
Cucsat.G15384.T12.C1	Cucsat.G15384.T12.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15384.T12	Cucsat.G15384.T12-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity