Cucsat.G15324.T11 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTAAAAAAATGAAGGAACTATTTAAAATAAAAATAAAATTTTTTCTTTCTGATGATATAATAAAATTTTTATTTTTCATGTCAATATGGATCTATACATAATTCGAAATAACAAATTTAATATAATGAAGTCGTAACATTGTTGCCTACACAAAAGCGGTAACCATTATTTCTCCTTTTCTTTTTTTCAAAGATAAAATAGAATAAAAATAAATCGGCAATGTTTATTTAATTGTACAGTACGTCGAAGTCTTCCGATAAAACGTGCATCATCTTCAGATCCCATAACGATTCAGGGAATGGAAATGGAGGAACGCTCCCTTGTTGTCTCTTCAAACCGTCATCAGGTTCATCTTCTCTCTCTTATCTTTTCATATCTTCACAATCACTCCTATTTGTTAGTCGGTTAGTTATCGATTTTTCTTTTGTTTCTTCGTTATCCTTTACCATGATTTCGGTGTCTCGCCTTTTCTTTTTTGAATTGTAAACGTAATCTACAATACTGGAGATATTGATTCATTAATATTTGGATTGGGTTATCTTGTTTTTTTTGCATTTGTGCAGCTGCAAATTTGTCAACTGGATTTTTATTCCTTTTCTTTTTTTAATCTAATTGGGTGTTGGATTCTCGTACTCGACCGTCTGATTTAGTTTGGTTTTCTAATCCTTTATTATTATTTGTTTGGTTTGATTGACTCGTTATTGGTACACTGTATTTTTAGTGAGGAATTGAACATGGGTCAACTTTTGATCTTCCTCTAAACTTGAAGAGCTGCAACACTTGGAACTTCAAAAGTCATTTGGACACCCAAAAATCATGATGCATTGTGTACTTATTTAATGTTATGGATTTTCATTTATTATAGTAGTTGAAAGGGCATAAAATTCCTTTTATATAACATTTGGGTTGTAGTTTCTCCGTTTTAAAGGATATATACAACTTGAATTTGAATGAAATTTCTAATGTTATCTTACAAGCTTTATGCTTTTCTTTGTATTCTTGTGATAGAATGCATGTTTAGGACTTTCAATCTAGTTTGATCAATTAAATTGTGGAGTTTCACCTAGAACAAGGAGAGTTCTCAATCTTTTCAAACCAAAATCTGTTTAGCTTTCTTGGGTTGTTTAACTATTTGTTTAAATTGGTTATTCTTATTACTATTGTGGGGGTTCACCTAGAATAAGTAGAGATCTCAATCTTCCAAACCAAAATCTGTTTAGCTTTCTTGGGGTTGTTTAACTATTTGTTTAATTGGGTTATTCTTATTACTGTTGTGGGGTTCACCTAGAATAAGTAGAGTTCTCAAACGTGATTGAGTGATTGAGGTAGTTCCATTTATCAAATGGTTTTTATATGTTGTGTATTTTGTTTATGGGTCTTTGAGCTCGAACATAGGTTTTTTTTTATTTTCTTTTGATGGATGGGGGCACCGTTGGTTTCAATTTGGAAGCTGAATATGAAGTGGGGTACATGCCTATTTTCTTCTATTGTTTACTTGAAAGTTACTACCTAACCAATGAGTCTAAAAAATCCATAAGAAGACATAGATATTGAATTCAATATCCACTTTGATATTCTGAAGATAAAAACTAGTCTACCACCAATACATCAAGTAGTTTGTAGGAAGGTTTTATGGCTTCAAGTTGTGTTGAAACCATCTCTTAATATTAATTATTCAAAGCAACAGAACATCTAAGTTTTTGAGTTCTGTGTTATCATTAAAGTTAGTTTTAACACCATAGTGTTGGTAGCTTTTTCTAAAAGTTGATCGAGTTAAACTATTATTAGAAGGAAAGTATAATGAGATCTCTATATTTGTGGAAAATTCTCTCTTGATTTATTTATAACTACTTGTCTGAAATTAATGTGGACTTCTTGTTTTGTAAGGTGGGGGATGGAGGTGAAAGTCCGAGGTACACTATTGACGAAGCTCTTGTATCCATGGGTTTTGGGAATTTTCAAATTCTTGTGCTTGCTTATGCTGGGATGGGATGGGTTTCAGAAGCTATGGAAATGATGTTGCTCTCCTTTGTTGGACCTGCAGTTCAGTCTTCATGGAATCTTTCTCCACATGCAGAGTCTTTGATCACCAGTGTGGTTTTTGCAGGCATGTTAGTTGGGGCCTATGCATGGGGCATAGTTTCTGATAAATATGGACGAAGGCAGGTCTCCTTTATTCTAATATCATTTCACTTTCATTGACATATGTGTATGCTTGATGATGTGACGTCCTTCCTCTTGTTAATGCAGCTTGTGCAATCTTCTTGTATTTTTTGTTTCCTCTTCTGTCTTAATGGTTCTTATGCTTCAGACTCGAAGAATTTTTTTTCTTTAACCTTTTGACTGATACCACTCATAAAAATTGTTTTTTATTCAGAACTTTGTAGTTGAGCTTTTACGAAAGCCTTGGTAATTCCTTTTTTTTTTTAACTTGTTCAAGGTAGATTTCTCATTATGGCAACAATCACATGTGTTGCTCAATTCCAAGTTCTTTTGCCCCAAATTGTATATCTTTGAATTTCTCTGTTTTTTTTTTTTTGAACTTTCAGTCTTGAGAATCCTAGATTTCCTTTGTTTTTTTATTTTTAACTTTTCTCATTCAGGAAAGGTTTCTTCATTACAGCAACAATCACTTCTATTGCTGGATTCCTAAGTGCTTTTGCCCCAAACTATACATCTCTGTTAATCCTTCGCTGTCTAGTTGGTGTTGGGTTGGGAGGTGGCCCTGTACTTGCATCCTGGTTCTTGGAATTCATTCCTGCTCCTGAAAGAGGCACTTGGATGGTTATTTTTTCAGCATTCTGGACCATTGGAACAATCCTTGAAGCTTCTTTGGCATGGGTATAATCTAGCTTTCTGTTGTAGTTCAGTGCACGTTCTTGCTACTTTTTCTTTTCTCTTATTAAATCAATAAATAAATAATAATTAAAAATAAGAAGAAGAAAAGATAAGATTCCAATAGGAAGTTATGTTCATTGCCTGACTCATTTTGAGTTGATCAACTTTGACACTGCTGGCAAATGAGATCTATTTTTGGAGATTTTTTTACACTTCTAAATTCATGTAGCATTTCTAATATTCCATTCCCTTTGATAATATTTCATAGTAGCTATATGGAGACTGTTTGTGGTGTAGTCTAACCGGTTAGTTCATTGGTTGTCAGTTTGCTGTTGTTCTAACAGGTCAGAATTAAATATTAGCTTAACAACTTTGTTAGTTATGCTGTTATCTGTTAATCCATTTGTACAAGGAGCTTTCTCGTCTAATTGTAGCTATTAACGATAACAAGTTCTTCGAGCAGTTAAAATTCATAATCTGATGAAAAAAAGTGGTATGGTATATAATAGTAGTGGTTGAAAATTTAATTTATGTCCTGTTGTCATGACTCATTAGTGGTTGATGTCATAGGTATCTAAAGGTGAAACAAAATTAACTTTCTTTAAATTTGGGTTAAGTTTACATATTGCACATGGAGGTACTCAGACTGTTCACTTGAATTTTTAACCTTATTTTTTTACTCTGCTTTTTTAGGACAATTCTTTTTCTTGTTGGTTCTTCCATTCATTTTTTTACTCTATGCTTTCCAGCTGCACCATTGAAAAGGGTTGCCATCACCTTTATGTTTTATGCCCTTGTATTTACAGATTGTCATGCCAAAATTAGGATGGAGATGGCTACTCGCATTTTCTTCTTTACCTTCATTTCTCCTACTACTCTTCTATCAATCTACTCCAGAGTCCCCACGGTATCTCTGTTTACAAGGTAGAACAAGTGATGCAGCTATTATTTTAGAGAAAATAGCACATCGTAATAGAACAAATCTCCCCCCTGGAATTCTTGTTTCTAGTCACTCGTATGATTTTGAGGAGCAAGGTACTGCTGTGGAAGATGTGCATTTGCTCTCACCAACACAAACTAAAGTTGAAACTTCTCAAGCAACAACCTCTAGTATGGTTGCTTTCTCACCATTGTTGAAGCTTCTTTCTCGAGAACTGCTTTTGTCCACATTGCTGCTCTGGGTGGTTTTCTTTGGAAATGCATTCTCTTATTATGGCCTCGTGTTGCTGACCACTGAGTTGACTGGTACAAGTAGATGTACATCTACCGATACACATCTAAACGTACATGAAGATGTCAACTACAGAGATGTGTTCATCTCTAGTTTCGCAGGTAACAGTCTTTTGGTCGTTCCAAAGTTTTCTCTAGCCAGGGACAAAAGTTTGGTGCATGGATGATAATCTAACCTCAAATTTTCTTTGAAGAGTTCCCTGGTCTCCTGTTATCAGCTGTCATGGTTGACAAATTAGGCCGTAAATTATCGATGTCTTCAATGTTCTTCCTCGGCGCCATATTTCTCTTTCCATTAGTATTTTATCGGAGTGATGGCTTAACAACAGGCCTTTTGTTTGGAGCTCGTGTATGTATCACATCTACGTTCACAGTTGTCTATATTTATGCTCCCGAGGTTAGTTGAAACACTATACTTTCTTTTCCCATATCATGCATCACAACTACAGATATTGTTTTTCTGCAGGTACATATTCTCTGATGCTTCCTAATAATAACGTAATTTTTTTTAAGAGGATGGTTTGCTGTCTGCTTTTTTTTTTTTTTCCTTTGATCTGGACTTGCATTCTCCTATAATATGCCATTGCCTTCAAAACTGAAAACTCTTTTACCCTCCACGTTAGTTGCTTGTGTGATTTATCATGACATGATTTATTGTCACCAAGTTACATTCTCCTGTAAGAATACCTTATCAAATTATCTTTCCACTTTCCTTCATTCCATTTTCTTCAAATGTCACGAACCAAAAATTTCCTTCGCACACGTTTATATTTCTTGGTGCAATCACGTTCACACCCCCAAGATTTTTATGTAGTTTTTCTCAAGCTCTTTCTTTGCTCTGGAATAACCTATTTATACTCTTACAATCTATGCAAACAACAGATATATCCAACCTCAATCCGAACGACAGGTGTCGGGGTTGCTAGTTCTGTAGGAAGAATTGGGGGCATGACATGCCCTCTCGTGGCAGTAGCTCTGGTTAAAGGATGTCATCAAACAATGGCGATTATTTTTTTTGAGATTGTATTTATTCTGTCAGGGATCTGTGTTATGCTGTTCCCATTCGAAACCAAGGGGCAAGATCTTCCTGAAAAAGTGTAGATGAAACTTATAAATCATATTGATCACATGGTTCTAATCGGACTCGATCCAGTCCCTATTACCTCTATTCATTATCTGCTGCTGATAGATATTGTTGAAGAGACTGCCTTTGGTCTCATTTTGCACATGTATAATTCAAGGTCTAGCAAAATTCTATCCATAAATACAATGTAGAACTTACACGACTTGTTTCATGTATAATATATATGAGCAAATGTGATTTATGTTGTTACATTTGTTAAATTCATTATGTTGTCATATTAGGAGTGATTTTTCTTGTAGCAAAGTAGTTTTGTGAAAGGAAGAAATTGTCACTTTGACTGAATTTATGGTGGCATTCGAAATTTTATAACATGTTGACTTCATGCATGGTCAAATTATA ATGGACGAAGCAACAATCACTTCTATTGCTGGATTCCTAAGTGCTTTTGCCCCAAACTATACATCTCTGTTAATCCTTCGCTGTCTAGTTGGTGTTGGGTTGGGAGGTGGCCCTGTACTTGCATCCTGGTTCTTGGAATTCATTCCTGCTCCTGAAAGAGGCACTTGGATGGTTATTTTTTCAGCATTCTGGACCATTGGAACAATCCTTGAAGCTTCTTTGGCATGGATTGTCATGCCAAAATTAGGATGGAGATGGCTACTCGCATTTTCTTCTTTACCTTCATTTCTCCTACTACTCTTCTATCAATCTACTCCAGAGTCCCCACGGTATCTCTGTTTACAAGGTAGAACAAGTGATGCAGCTATTATTTTAGAGAAAATAGCACATCGTAATAGAACAAATCTCCCCCCTGGAATTCTTGTTTCTAGTCACTCGTATGATTTTGAGGAGCAAGGTACTGCTGTGGAAGATGTGCATTTGCTCTCACCAACACAAACTAAAGTTGAAACTTCTCAAGCAACAACCTCTAGTATGGTTGCTTTCTCACCATTGTTGAAGCTTCTTTCTCGAGAACTGCTTTTGTCCACATTGCTGCTCTGGGTGGTTTTCTTTGGAAATGCATTCTCTTATTATGGCCTCGTGTTGCTGACCACTGAGTTGACTGGTACAAGTAGATGTACATCTACCGATACACATCTAAACGTACATGAAGATGTCAACTACAGAGATGTGTTCATCTCTAGTTTCGCAGGTAACAGTCTTTTGGTCGTTCCAAAGTTTTCTCTAGCCAGGGACAAAAGTTTGGTGCATGGATGA MDEATITSIAGFLSAFAPNYTSLLILRCLVGVGLGGGPVLASWFLEFIPAPERGTWMVIFSAFWTIGTILEASLAWIVMPKLGWRWLLAFSSLPSFLLLLFYQSTPESPRYLCLQGRTSDAAIILEKIAHRNRTNLPPGILVSSHSYDFEEQGTAVEDVHLLSPTQTKVETSQATTSSMVAFSPLLKLLSRELLLSTLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDTHLNVHEDVNYRDVFISSFAGNSLLVVPKFSLARDKSLVHG Homology
BLAST of Cucsat.G15324.T11 vs. ExPASy Swiss-Prot
Match: Q940M4 (Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 9.9e-80 Identity = 161/257 (62.65%), Postives = 190/257 (73.93%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. ExPASy Swiss-Prot
Match: Q2XWK0 (Synaptic vesicle 2-related protein OS=Xenopus laevis OX=8355 GN=svop PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.1e-30 Identity = 84/211 (39.81%), Postives = 109/211 (51.66%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. ExPASy Swiss-Prot
Match: Q1JP63 (Synaptic vesicle 2-related protein OS=Bos taurus OX=9913 GN=SVOP PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 9.4e-30 Identity = 83/211 (39.34%), Postives = 108/211 (51.18%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. ExPASy Swiss-Prot
Match: Q8N4V2 (Synaptic vesicle 2-related protein OS=Homo sapiens OX=9606 GN=SVOP PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 9.4e-30 Identity = 83/211 (39.34%), Postives = 108/211 (51.18%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. ExPASy Swiss-Prot
Match: Q5R5T8 (Synaptic vesicle 2-related protein OS=Pongo abelii OX=9601 GN=SVOP PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 9.4e-30 Identity = 83/211 (39.34%), Postives = 108/211 (51.18%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. NCBI nr
Match: KAE8650492.1 (hypothetical protein Csa_009893 [Cucumis sativus]) HSP 1 Score: 529 bits (1363), Expect = 2.78e-189 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. NCBI nr
Match: XP_031738943.1 (organic cation/carnitine transporter 7 isoform X2 [Cucumis sativus]) HSP 1 Score: 481 bits (1239), Expect = 8.77e-168 Identity = 254/269 (94.42%), Postives = 255/269 (94.80%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. NCBI nr
Match: XP_004140724.1 (organic cation/carnitine transporter 7 isoform X1 [Cucumis sativus]) HSP 1 Score: 481 bits (1239), Expect = 7.31e-167 Identity = 254/269 (94.42%), Postives = 255/269 (94.80%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. NCBI nr
Match: XP_008456184.1 (PREDICTED: organic cation/carnitine transporter 7 [Cucumis melo] >KAA0037214.1 organic cation/carnitine transporter 7 [Cucumis melo var. makuwa] >TYK13859.1 organic cation/carnitine transporter 7 [Cucumis melo var. makuwa]) HSP 1 Score: 468 bits (1203), Expect = 2.13e-161 Identity = 247/269 (91.82%), Postives = 249/269 (92.57%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. NCBI nr
Match: XP_038894171.1 (organic cation/carnitine transporter 7 isoform X2 [Benincasa hispida]) HSP 1 Score: 441 bits (1135), Expect = 5.97e-152 Identity = 231/269 (85.87%), Postives = 242/269 (89.96%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. ExPASy TrEMBL
Match: A0A0A0L6X7 (MFS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G198470 PE=4 SV=1) HSP 1 Score: 481 bits (1239), Expect = 3.54e-167 Identity = 254/269 (94.42%), Postives = 255/269 (94.80%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. ExPASy TrEMBL
Match: A0A5A7T162 (Organic cation/carnitine transporter 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00440 PE=4 SV=1) HSP 1 Score: 468 bits (1203), Expect = 1.03e-161 Identity = 247/269 (91.82%), Postives = 249/269 (92.57%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. ExPASy TrEMBL
Match: A0A1S3C3X5 (organic cation/carnitine transporter 7 OS=Cucumis melo OX=3656 GN=LOC103496199 PE=4 SV=1) HSP 1 Score: 468 bits (1203), Expect = 1.03e-161 Identity = 247/269 (91.82%), Postives = 249/269 (92.57%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. ExPASy TrEMBL
Match: A0A6J1GCF1 (organic cation/carnitine transporter 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452692 PE=4 SV=1) HSP 1 Score: 427 bits (1099), Expect = 4.17e-146 Identity = 221/269 (82.16%), Postives = 237/269 (88.10%), Query Frame = 0
BLAST of Cucsat.G15324.T11 vs. ExPASy TrEMBL
Match: A0A6J1GBL9 (organic cation/carnitine transporter 7 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452692 PE=4 SV=1) HSP 1 Score: 427 bits (1099), Expect = 6.80e-146 Identity = 221/269 (82.16%), Postives = 237/269 (88.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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