Cucsat.G15324.T10 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTCTTTTTTTCAAAGATAAAATAGAATAAAAATAAATCGGCAATGTTTATTTAATTGTACAGTACGTCGAAGTCTTCCGATAAAACGTGCATCATCTTCAGATCCCATAACGATTCAGGGAATGGAAATGGAGGAACGCTCCCTTGTTGTCTCTTCAAACCGTCATCAGGTTCATCTTCTCTCTCTTATCTTTTCATATCTTCACAATCACTCCTATTTGTTAGTCGGTTAGTTATCGATTTTTCTTTTGTTTCTTCGTTATCCTTTACCATGATTTCGGTGTCTCGCCTTTTCTTTTTTGAATTGTAAACGTAATCTACAATACTGGAGATATTGATTCATTAATATTTGGATTGGGTTATCTTGTTTTTTTTGCATTTGTGCAGCTGCAAATTTGTCAACTGGATTTTTATTCCTTTTCTTTTTTTAATCTAATTGGGTGTTGGATTCTCGTACTCGACCGTCTGATTTAGTTTGGTTTTCTAATCCTTTATTATTATTTGTTTGGTTTGATTGACTCGTTATTGGTACACTGTATTTTTAGTGAGGAATTGAACATGGGTCAACTTTTGATCTTCCTCTAAACTTGAAGAGCTGCAACACTTGGAACTTCAAAAGTCATTTGGACACCCAAAAATCATGATGCATTGTGTACTTATTTAATGTTATGGATTTTCATTTATTATAGTAGTTGAAAGGGCATAAAATTCCTTTTATATAACATTTGGGTTGTAGTTTCTCCGTTTTAAAGGATATATACAACTTGAATTTGAATGAAATTTCTAATGTTATCTTACAAGCTTTATGCTTTTCTTTGTATTCTTGTGATAGAATGCATGTTTAGGACTTTCAATCTAGTTTGATCAATTAAATTGTGGAGTTTCACCTAGAACAAGGAGAGTTCTCAATCTTTTCAAACCAAAATCTGTTTAGCTTTCTTGGGTTGTTTAACTATTTGTTTAAATTGGTTATTCTTATTACTATTGTGGGGGTTCACCTAGAATAAGTAGAGATCTCAATCTTCCAAACCAAAATCTGTTTAGCTTTCTTGGGGTTGTTTAACTATTTGTTTAATTGGGTTATTCTTATTACTGTTGTGGGGTTCACCTAGAATAAGTAGAGTTCTCAAACGTGATTGAGTGATTGAGGTAGTTCCATTTATCAAATGGTTTTTATATGTTGTGTATTTTGTTTATGGGTCTTTGAGCTCGAACATAGGTTTTTTTTTATTTTCTTTTGATGGATGGGGGCACCGTTGGTTTCAATTTGGAAGCTGAATATGAAGTGGGGTACATGCCTATTTTCTTCTATTGTTTACTTGAAAGTTACTACCTAACCAATGAGTCTAAAAAATCCATAAGAAGACATAGATATTGAATTCAATATCCACTTTGATATTCTGAAGATAAAAACTAGTCTACCACCAATACATCAAGTAGTTTGTAGGAAGGTTTTATGGCTTCAAGTTGTGTTGAAACCATCTCTTAATATTAATTATTCAAAGCAACAGAACATCTAAGTTTTTGAGTTCTGTGTTATCATTAAAGTTAGTTTTAACACCATAGTGTTGGTAGCTTTTTCTAAAAGTTGATCGAGTTAAACTATTATTAGAAGGAAAGTATAATGAGATCTCTATATTTGTGGAAAATTCTCTCTTGATTTATTTATAACTACTTGTCTGAAATTAATGTGGACTTCTTGTTTTGTAAGGTGGGGGATGGAGGTGAAAGTCCGAGGTACACTATTGACGAAGCTCTTGTATCCATGGGTTTTGGGAATTTTCAAATTCTTGTGCTTGCTTATGCTGGGATGGGATGGGTTTCAGAAGCTATGGAAATGATGTTGCTCTCCTTTGTTGGACCTGCAGTTCAGTCTTCATGGAATCTTTCTCCACATGCAGAGTCTTTGATCACCAGTGTGGTTTTTGCAGGCATGTTAGTTGGGGCCTATGCATGGGGCATAGTTTCTGATAAATATGGACGAAGGCAGGTCTCCTTTATTCTAATATCATTTCACTTTCATTGACATATGTGTATGCTTGATGATGTGACGTCCTTCCTCTTGTTAATGCAGCTTGTGCAATCTTCTTGTATTTTTTGTTTCCTCTTCTGTCTTAATGGTTCTTATGCTTCAGACTCGAAGAATTTTTTTTCTTTAACCTTTTGACTGATACCACTCATAAAAATTGTTTTTTATTCAGAACTTTGTAGTTGAGCTTTTACGAAAGCCTTGGTAATTCCTTTTTTTTTTTAACTTGTTCAAGGTAGATTTCTCATTATGGCAACAATCACATGTGTTGCTCAATTCCAAGTTCTTTTGCCCCAAATTGTATATCTTTGAATTTCTCTGTTTTTTTTTTTTTGAACTTTCAGTCTTGAGAATCCTAGATTTCCTTTGTTTTTTTATTTTTAACTTTTCTCATTCAGGAAAGGTTTCTTCATTACAGCAACAATCACTTCTATTGCTGGATTCCTAAGTGCTTTTGCCCCAAACTATACATCTCTGTTAATCCTTCGCTGTCTAGTTGGTGTTGGGTTGGGAGGTGGCCCTGTACTTGCATCCTGGTTCTTGGAATTCATTCCTGCTCCTGAAAGAGGCACTTGGATGGTTATTTTTTCAGCATTCTGGACCATTGGAACAATCCTTGAAGCTTCTTTGGCATGGGTATAATCTAGCTTTCTGTTGTAGTTCAGTGCACGTTCTTGCTACTTTTTCTTTTCTCTTATTAAATCAATAAATAAATAATAATTAAAAATAAGAAGAAGAAAAGATAAGATTCCAATAGGAAGTTATGTTCATTGCCTGACTCATTTTGAGTTGATCAACTTTGACACTGCTGGCAAATGAGATCTATTTTTGGAGATTTTTTTACACTTCTAAATTCATGTAGCATTTCTAATATTCCATTCCCTTTGATAATATTTCATAGTAGCTATATGGAGACTGTTTGTGGTGTAGTCTAACCGGTTAGTTCATTGGTTGTCAGTTTGCTGTTGTTCTAACAGGTCAGAATTAAATATTAGCTTAACAACTTTGTTAGTTATGCTGTTATCTGTTAATCCATTTGTACAAGGAGCTTTCTCGTCTAATTGTAGCTATTAACGATAACAAGTTCTTCGAGCAGTTAAAATTCATAATCTGATGAAAAAAAGTGGTATGGTATATAATAGTAGTGGTTGAAAATTTAATTTATGTCCTGTTGTCATGACTCATTAGTGGTTGATGTCATAGGTATCTAAAGGTGAAACAAAATTAACTTTCTTTAAATTTGGGTTAAGTTTACATATTGCACATGGAGGTACTCAGACTGTTCACTTGAATTTTTAACCTTATTTTTTTACTCTGCTTTTTTAGGACAATTCTTTTTCTTGTTGGTTCTTCCATTCATTTTTTTACTCTATGCTTTCCAGCTGCACCATTGAAAAGGGTTGCCATCACCTTTATGTTTTATGCCCTTGTATTTACAGATTGTCATGCCAAAATTAGGATGGAGATGGCTACTCGCATTTTCTTCTTTACCTTCATTTCTCCTACTACTCTTCTATCAATCTACTCCAGAGTCCCCACGGTATCTCTGTTTACAAGGTAGAACAAGTGATGCAGCTATTATTTTAGAGAAAATAGCACATCGTAATAGAACAAATCTCCCCCCTGGAATTCTTGTTTCTAGTCACTCGTATGATTTTGAGGAGCAAGGTACTGCTGTGGAAGATGTGCATTTGCTCTCACCAACACAAACTAAAGTTGAAACTTCTCAAGCAACAACCTCTAGTATGGTTGCTTTCTCACCATTGTTGAAGCTTCTTTCTCGAGAACTGCTTTTGTCCACATTGCTGCTCTGGGTGGTTTTCTTTGGAAATGCATTCTCTTATTATGGCCTCGTGTTGCTGACCACTGAGTTGACTGGTACAAGTAGATGTACATCTACCGATACACATCTAAACGTACATGAAGATGTCAACTACAGAGATGTGTTCATCTCTAGTTTCGCAGGTAACAGTCTTTTGGTCGTTCCAAAGTTTTCTCTAGCCAGGGACAAAAGTTTGGTGCATGGATGATAATCTAACCTCAAATTTTCTTTGAAGAGTTCCCTGGTCTCCTGTTATCAGCTGTCATGGTTGACAAATTAGGCCGTAAATTATCGATGTCTTCAATGTTCTTCCTCGGCGCCATATTTCTCTTTCCATTAGTATTTTATCGGAGTGATGGCTTAACAACAGGCCTTTTGTTTGGAGCTCGTGTATGTATCACATCTACGTTCACAGTTGTCTATATTTATGCTCCCGAGGTTAGTTGAAACACTATACTTTCTTTTCCCATATCATGCATCACAACTACAGATATTGTTTTTCTGCAGGTACATATTCTCTGATGCTTCCTAATAATAACGTAATTTTTTTTAAGAGGATGGTTTGCTGTCTGCTTTTTTTTTTTTTTCCTTTGATCTGGACTTGCATTCTCCTATAATATGCCATTGCCTTCAAAACTGAAAACTCTTTTACCCTCCACGTTAGTTGCTTGTGTGATTTATCATGACATGATTTATTGTCACCAAGTTACATTCTCCTGTAAGAATACCTTATCAAATTATCTTTCCACTTTCCTTCATTCCATTTTCTTCAAATGTCACGAACCAAAAATTTCCTTCGCACACGTTTATATTTCTTGGTGCAATCACGTTCACACCCCCAAGATTTTTATGTAGTTTTTCTCAAGCTCTTTCTTTGCTCTGGAATAACCTATTTATACTCTTACAATCTATGCAAACAACAGATATATCCAACCTCAATCCGAACGACAGGTGTCGGGGTTGCTAGTTCTGTAGGAAGAATTGGGGGCATGACATGCCCTCTCGTGGCAGTAGCTCTGGTTAAAGGATGTCATCAAACAATGGCGATTATTTTTTTTGAGATTGTATTTATTCTGTCAGGGATCTGTGTTATGCTGTTCCCATTCGAAACCAAGGGGCAAGATCTTCCTGAAAAAGTGTAGATGAAACTTATAAATCATATTGATCACATGGTTCTAATCGGACTCGATCCAGTCCCTATTACCTCTATTCATTATCTGCTGCTGATAGATATTGTTGAAGAGACTGCCTTTGGTCTCATTTTGCACATGTATAATTCAAGGTCTAGCAAAATTCTATCCATAAATACAATGTAGAACTTACACGACTTGTTTCATGTATAATATATATGAGCAAATGTGATTTATGTTGTTACATTTGTTAAATTCATTATGTTGTCATATTAGGAGTGATTTTTCTTGTAGCAAAGTAGTTTTGTGAAAGGAAGAAATTGTCACTTTGACTGAATTTATGGTGGCATTCGAAATTTTATAACATGTTG ATGCCCTTGTATTTACAGATTGTCATGCCAAAATTAGGATGGAGATGGCTACTCGCATTTTCTTCTTTACCTTCATTTCTCCTACTACTCTTCTATCAATCTACTCCAGAGTCCCCACGGTATCTCTGTTTACAAGGTAGAACAAGTGATGCAGCTATTATTTTAGAGAAAATAGCACATCGTAATAGAACAAATCTCCCCCCTGGAATTCTTGTTTCTAGTCACTCGTATGATTTTGAGGAGCAAGGTACTGCTGTGGAAGATGTGCATTTGCTCTCACCAACACAAACTAAAGTTGAAACTTCTCAAGCAACAACCTCTAGTATGGTTGCTTTCTCACCATTGTTGAAGCTTCTTTCTCGAGAACTGCTTTTGTCCACATTGCTGCTCTGGGTGGTTTTCTTTGGAAATGCATTCTCTTATTATGGCCTCGTGTTGCTGACCACTGAGTTGACTGGTACAAGTAGATGTACATCTACCGATACACATCTAAACGTACATGAAGATGTCAACTACAGAGATGTGTTCATCTCTAGTTTCGCAGAGTTCCCTGGTCTCCTGTTATCAGCTGTCATGGTTGACAAATTAGGCCGTAAATTATCGATGTCTTCAATGTTCTTCCTCGGCGCCATATTTCTCTTTCCATTAGTATTTTATCGGAGTGATGGCTTAACAACAGGCCTTTTGTTTGGAGCTCGTGTATGTATCACATCTACGTTCACAGTTGTCTATATTTATGCTCCCGAGATATATCCAACCTCAATCCGAACGACAGGTGTCGGGGTTGCTAGTTCTGTAGGAAGAATTGGGGGCATGACATGCCCTCTCGTGGCAGTAGCTCTGGTTAAAGGATGTCATCAAACAATGGCGATTATTTTTTTTGAGATTGTATTTATTCTGTCAGGGATCTGTGTTATGCTGTTCCCATTCGAAACCAAGGGGCAAGATCTTCCTGAAAAAGTGTAG MPLYLQIVMPKLGWRWLLAFSSLPSFLLLLFYQSTPESPRYLCLQGRTSDAAIILEKIAHRNRTNLPPGILVSSHSYDFEEQGTAVEDVHLLSPTQTKVETSQATTSSMVAFSPLLKLLSRELLLSTLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDTHLNVHEDVNYRDVFISSFAEFPGLLLSAVMVDKLGRKLSMSSMFFLGAIFLFPLVFYRSDGLTTGLLFGARVCITSTFTVVYIYAPEIYPTSIRTTGVGVASSVGRIGGMTCPLVAVALVKGCHQTMAIIFFEIVFILSGICVMLFPFETKGQDLPEKV Homology
BLAST of Cucsat.G15324.T10 vs. ExPASy Swiss-Prot
Match: Q940M4 (Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 1.7e-99 Identity = 197/324 (60.80%), Postives = 240/324 (74.07%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. ExPASy Swiss-Prot
Match: Q2XWK0 (Synaptic vesicle 2-related protein OS=Xenopus laevis OX=8355 GN=svop PE=2 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 8.8e-35 Identity = 103/326 (31.60%), Postives = 155/326 (47.55%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. ExPASy Swiss-Prot
Match: Q8BFT9 (Synaptic vesicle 2-related protein OS=Mus musculus OX=10090 GN=Svop PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.0e-34 Identity = 106/324 (32.72%), Postives = 154/324 (47.53%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. ExPASy Swiss-Prot
Match: Q1JP63 (Synaptic vesicle 2-related protein OS=Bos taurus OX=9913 GN=SVOP PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 5.7e-34 Identity = 105/324 (32.41%), Postives = 154/324 (47.53%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. ExPASy Swiss-Prot
Match: Q8N4V2 (Synaptic vesicle 2-related protein OS=Homo sapiens OX=9606 GN=SVOP PE=1 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.3e-33 Identity = 105/327 (32.11%), Postives = 158/327 (48.32%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. NCBI nr
Match: XP_031738943.1 (organic cation/carnitine transporter 7 isoform X2 [Cucumis sativus]) HSP 1 Score: 603 bits (1556), Expect = 3.71e-215 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. NCBI nr
Match: XP_004140724.1 (organic cation/carnitine transporter 7 isoform X1 [Cucumis sativus]) HSP 1 Score: 603 bits (1556), Expect = 3.43e-214 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. NCBI nr
Match: XP_008456184.1 (PREDICTED: organic cation/carnitine transporter 7 [Cucumis melo] >KAA0037214.1 organic cation/carnitine transporter 7 [Cucumis melo var. makuwa] >TYK13859.1 organic cation/carnitine transporter 7 [Cucumis melo var. makuwa]) HSP 1 Score: 587 bits (1512), Expect = 1.69e-207 Identity = 306/315 (97.14%), Postives = 309/315 (98.10%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. NCBI nr
Match: XP_038894171.1 (organic cation/carnitine transporter 7 isoform X2 [Benincasa hispida]) HSP 1 Score: 543 bits (1399), Expect = 3.11e-191 Identity = 283/314 (90.13%), Postives = 292/314 (92.99%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. NCBI nr
Match: XP_038894162.1 (organic cation/carnitine transporter 7 isoform X1 [Benincasa hispida]) HSP 1 Score: 543 bits (1399), Expect = 2.84e-190 Identity = 283/314 (90.13%), Postives = 292/314 (92.99%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. ExPASy TrEMBL
Match: A0A0A0L6X7 (MFS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G198470 PE=4 SV=1) HSP 1 Score: 603 bits (1556), Expect = 1.66e-214 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. ExPASy TrEMBL
Match: A0A5A7T162 (Organic cation/carnitine transporter 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00440 PE=4 SV=1) HSP 1 Score: 587 bits (1512), Expect = 8.19e-208 Identity = 306/315 (97.14%), Postives = 309/315 (98.10%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. ExPASy TrEMBL
Match: A0A1S3C3X5 (organic cation/carnitine transporter 7 OS=Cucumis melo OX=3656 GN=LOC103496199 PE=4 SV=1) HSP 1 Score: 587 bits (1512), Expect = 8.19e-208 Identity = 306/315 (97.14%), Postives = 309/315 (98.10%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. ExPASy TrEMBL
Match: A0A6J1KG61 (organic cation/carnitine transporter 7-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111492935 PE=3 SV=1) HSP 1 Score: 524 bits (1350), Expect = 2.51e-184 Identity = 270/316 (85.44%), Postives = 285/316 (90.19%), Query Frame = 0
BLAST of Cucsat.G15324.T10 vs. ExPASy TrEMBL
Match: A0A6J1GCD1 (organic cation/carnitine transporter 7 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111452692 PE=4 SV=1) HSP 1 Score: 521 bits (1343), Expect = 2.91e-183 Identity = 269/316 (85.13%), Postives = 286/316 (90.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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