Cucsat.G14163.T26 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCAATACAGCATCGAATCAAACTTTGGAACTCTTTTAAATTTTGGAGAATCTAGTGAATGAATCTTATAACTTATCTAAGTCCAAGATCTTGAGCTTGAAGAAATAAGAAAAGACAAATAGTTTTTTTGGTAAGGTTCAAATCGAGATTTGCTTAAAATTTATGGTGTAATTAAATGTTCATGTGAATGTTTGTTTATTGAAATTTCCTTAACATTGAGAAACAAATTATTTGCATTCCTATTAATTTGAAAGTTGCAGCCAAGAAGTAGAAGCAGAATTGAGGAAGAAGAAAAGATTGTTTACAGCATGCATTTTTCTGTTCCTTTGGAGCTTTACAATCAGCTCTAATGGCGGTCACCAGTATTTTTCATTTCTCTCTACCTTCCAAATCTAGCCCTTCAACTCCGCCGTTTAAGACTTCTCACTCCCTCCTTTCCTCCCCAAATTTCAGGCAAGGTTACTCTTCAATCTCTTTCAACTGTGTGATCAATAACCGAATCTTTACAACTCTTCTTTTTAACATTTCAGGCCTCTCAGAATCATCTGTTGCCTATCTAATCACCGATCAGATGACGAAAACCCCACTACTTCAAACAGCACGATTAACTCCCTGAGAGTCGTCTTCGCCGCTGGAGGCACTGGTGGTCGCGTTTATCCCGCCGTCGCCATTGCCGATGAGCTCCTACTTGCTTACCCCACAGCACAGATCCTCTTTCTGGGAACACCGAACAGCACGGAAAGCGCCGCCGTCCCCTCAGCCGGGTACGAGTTCGACACAGTTCTGGCCAGTCAGTTAGCTCACCCTATTATATCTCCCCAAAACCTTCTCCTTCCTTTACATGTGATCAAATCCGTGATTGCGAGTTACAAAAAACTCATCGATTTCAAGCCCCACATCGTCATTGGCACAGGTGGATACGTCTCGTTCCCGATTTGCCTTGCTGCAAAGCTTATTAATGGCGTCAAGCTTGCAATCCAAGAGCAGAACTCGGTTCCAGGTTTTGCGAATTGGGTTCTTTCTCATTTTGCAGATATTGTGTTCGTTGTATTGAACTCCACAGTTGAGTGCTTTCCAAGGAAGAAGAAATGCTTGGTTTGTGGGAACCCGGTGAGGTTGACATTGAAACAGCACGTGCCCAAGTCTGTGGCACGTTTGCATTTCTTTCCAAGATCAAGGAAGGGTGAGGATTTGGAGGCTAAGGTGTTGCTTATTCTTGGGGGGTCTTTGGGTGCAAATGCCATCAATATTGCCATGTTGAATCTGTATTATCAGATGTTGTTGGAGAACAAGAATTTGTACATTATATGGCAGACTGGTGTGAAGACATTTGATGAGATGGACAGCCTTGTGAAAAACCATCCCCGTCTGCATTTAACGCCGTAATTTCTTTACTCAGTATTAAATGCCTTTCAATTTTCCTCTTGCTCACTGATTTTAGTCGTGATTATGAATTCCAACAACCTGCATTTACTTGCCTCCATGTTCTTTATAGTCTTGATATTAAAATCTAGATGTCTTCATCTTCATATATGGTTGTGCATAAATTGAAATTTTTGATGTCATTATCTTCTAGAGTGCATCTATTGGTTGACAGCAAATACTTGGAGAGAGCTTTCTGAGACCACAGCAACTGTTTGTAGATTTTTATTTGTTGCTGCTGAAGATCTTTTGGAACCTCTAACTTAGAACATCAGAGTCAAGCATCTACATGTATCCTAGAACTGAAGTATGAGTGTTTGACATTTGCTAATCAACGCAGATAATAAGATTAAGCATGACTGAATCTAGAAAACTCAAAACCCTGTTGGCTCCATGCTCGTACTGTGTAAGATGCTCGTATAATGGTGATGTTGGCCAACATTGGAAAAAAATCACTTCATTGAACTTTTATGGAAGTGTCACCCTATCTCTTTGAACTATACATGGATGCATGTCTAGTGTTACGGCCTCTCTTGATGAACAATTTTGATCTTCTTGCTTTGATATTTTTTAGATCAATAAATGTAGAGGGATTCGAACTGCAAACTTTGTGGTTAATAACACTCTCGTATGCCAACATACATAGGTTAATAAATGCCAGTTGAGGTATGCTTGCTGATACTTAATACAACCAAATTTTGAAGATTAGATGACCAAGATTTGTCCATTTGTATGGTATTGGTTGTCTTAATCAAATATTTTTGGCGTGGATGTAATCACCTGATATTCTGGGTTCATTGTTTCCTTCATAAAATCCTACATGTAAGCATCTTATGATGAACTTCATAAATGTATAAGCATGTAATAGATCCGGCTTTGAGATTGAATTGGTGTTTTTCCTTTTATTGGTGAAGGTTCATGCATTCTCTGCATTTGGCTTATGCAGCTGCAGATCTCGTTGTTTCTAGAGCAGGGGCCATGACTTGCTCTGAGATCCTAGCAACTGGAAAGCCATCTATACTGGTAAAAGTTACAACCCCTCCACACAAAGCTTTTCTGAATGTTCTAAATTATTTGAAAGGAACCTTATAGATTTTGATTCTGTAACTTTAGATACCATCACCTCATGAAGATGAAGGACATCAGTTTAGAAATGCTTCCATAATGGCTGACATGGCTGGTTCAACAGTCATTAATGAAGATGAACTAGATTCAACCACGCTTGCAAGTGCAATTCAAGAGATATTAGGTATGTTGAACATGATCTGCTAATGAAATCATCTATTTTGAAACTCATGCGTTAGTTTGCTTGTGGTTTTGAGATCTTTACTATGAATCAGTACGAATCATCTAAAATGGTACTACTTATTGCTTATACTGCAACTTTGTTAATGGAAGAAAGTCTAATATGTTTTATAACATAAAACAAGCTAGACTTTGGTTTTTTAAAATTGTGCTGTCTTTTTACGACTTATTTGGCATGATTTTCATATTTCTAATAAAAGCATTTGAAAATTCATAGCTAGTTTCCAAAGACAAAACTAAATTGTTTGAAAATTATTTTTCTTAAGTTTCAAAATGAAGGTCCCGTTTGGTAACTATTTCGTTTTTGTTTTTGAAAATTAAACTTGTTTCCTTTCTATTTTGTAACAAGTCTTTGTTATTGTTGCAACATCGACTTTTTGTTATGAGACGAAAACTTCATGAAGTAGCCAATACAATATATAATTCTTCTTTGTTTTGCCTCATTTCATTGACTTTTCTGGTGACTTCTTCTGTTCACTTTGTTTGAAGAAACTGAAAGATTAGTCTCATAAATAATCAAAAGTGATAATAGTATCAACTTTAGATCATCTCATAGTATGAGTATTTATTTGTTTACAGGTGATGAGACTAAAATGGCAGATCTATCTGAAAGAGCATTGCGAGTATCGAAACCAAATGCCTCTACTGAAATTGTTCAACACATTGGAAGCTTAATAGACTTGTCAACTAGGAAGGCCAAGCAGCATTGATATAATAATGGCGGATGAGTTACCTTTACGAAGTAGACTTCGATAACAATTTTGTTTTGTGTTTGGAGAAATTAAAATTGTTTCCATTTTTTTTTTGTTTTTCTCTTCTCAAGGTTAGATTTTCTACCAGACGTTCCACTTCCCACTGCCCAACTTTGGGTTTAGTCATATTTTGAGAAAATTAAAGACCCCTTTTGGTTTGCATGTTTTTGACATTACTTCATTTAGAAACTTCTGTTATGAGGAGTTTTCATGGACTAAGTTTTTGTTTGGATTTCTAATTTACACTTTGAAAATTAA ATGGCGGTCACCAGTATTTTTCATTTCTCTCTACCTTCCAAATCTAGCCCTTCAACTCCGCCGTTTAAGACTTCTCACTCCCTCCTTTCCTCCCCAAATTTCAGGCCTCTCAGAATCATCTGTTGCCTATCTAATCACCGATCAGATGACGAAAACCCCACTACTTCAAACAGCACGATTAACTCCCTGAGAGTCGTCTTCGCCGCTGGAGGCACTGGTGGTCGCGTTTATCCCGCCGTCGCCATTGCCGATGAGCTCCTACTTGCTTACCCCACAGCACAGATCCTCTTTCTGGGAACACCGAACAGCACGGAAAGCGCCGCCGTCCCCTCAGCCGGGTACGAGTTCGACACAGTTCTGGCCAGTCAGTTAGCTCACCCTATTATATCTCCCCAAAACCTTCTCCTTCCTTTACATGTGATCAAATCCGTGATTGCGAGTTACAAAAAACTCATCGATTTCAAGCCCCACATCGTCATTGGCACAGGTGGATACGTCTCGTTCCCGATTTGCCTTGCTGCAAAGCTTATTAATGGCGTCAAGCTTGCAATCCAAGAGCAGAACTCGGTTCCAGGTTTTGCGAATTGGGTTCTTTCTCATTTTGCAGATATTGTGTTCGTTGTATTGAACTCCACAGTTGAGTGCTTTCCAAGGAAGAAGAAATGCTTGGTTTGTGGGAACCCGGTGAGGTTGACATTGAAACAGCACGTGCCCAAGTCTGTGGCACGTTTGCATTTCTTTCCAAGATCAAGGAAGGGTGAGGATTTGGAGGCTAAGGTGTTGCTTATTCTTGGGGGGTCTTTGGGTGCAAATGCCATCAATATTGCCATGTTGAATCTGTATTATCAGATGTTGTTGGAGAACAAGAATTTGTACATTATATGGCAGACTGGTGTGAAGACATTTGATGAGATGGACAGCCTTGTGAAAAACCATCCCCGTCTGCATTTAACGCCAGTGCATCTATTGGTTGACAGCAAATACTTGGAGAGAGCTTTCTGA MAVTSIFHFSLPSKSSPSTPPFKTSHSLLSSPNFRPLRIICCLSNHRSDDENPTTSNSTINSLRVVFAAGGTGGRVYPAVAIADELLLAYPTAQILFLGTPNSTESAAVPSAGYEFDTVLASQLAHPIISPQNLLLPLHVIKSVIASYKKLIDFKPHIVIGTGGYVSFPICLAAKLINGVKLAIQEQNSVPGFANWVLSHFADIVFVVLNSTVECFPRKKKCLVCGNPVRLTLKQHVPKSVARLHFFPRSRKGEDLEAKVLLILGGSLGANAINIAMLNLYYQMLLENKNLYIIWQTGVKTFDEMDSLVKNHPRLHLTPVHLLVDSKYLERAF Homology
BLAST of Cucsat.G14163.T26 vs. ExPASy Swiss-Prot
Match: Q2S528 (UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=murG PE=3 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 7.5e-37 Identity = 91/253 (35.97%), Postives = 142/253 (56.13%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. ExPASy Swiss-Prot
Match: A0M527 (UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Gramella forsetii (strain KT0803) OX=411154 GN=murG PE=3 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 6.3e-36 Identity = 94/242 (38.84%), Postives = 135/242 (55.79%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. ExPASy Swiss-Prot
Match: A5FIY3 (UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=murG PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 9.1e-35 Identity = 93/241 (38.59%), Postives = 138/241 (57.26%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. ExPASy Swiss-Prot
Match: A6H195 (UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) OX=402612 GN=murG PE=3 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 3.8e-33 Identity = 89/241 (36.93%), Postives = 133/241 (55.19%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. ExPASy Swiss-Prot
Match: Q8R9G6 (UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=murG PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 6.5e-33 Identity = 93/248 (37.50%), Postives = 132/248 (53.23%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. NCBI nr
Match: XP_004137489.1 (uncharacterized protein LOC101216864 [Cucumis sativus] >XP_031736158.1 uncharacterized protein LOC101216864 [Cucumis sativus] >KAE8652554.1 hypothetical protein Csa_013115 [Cucumis sativus]) HSP 1 Score: 628 bits (1619), Expect = 1.72e-224 Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. NCBI nr
Match: XP_008461957.1 (PREDICTED: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Cucumis melo]) HSP 1 Score: 605 bits (1559), Expect = 2.34e-215 Identity = 305/319 (95.61%), Postives = 314/319 (98.43%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. NCBI nr
Match: XP_038893738.1 (UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Benincasa hispida]) HSP 1 Score: 565 bits (1457), Expect = 7.80e-200 Identity = 284/319 (89.03%), Postives = 306/319 (95.92%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. NCBI nr
Match: TYJ99016.1 (UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Cucumis melo var. makuwa]) HSP 1 Score: 521 bits (1343), Expect = 1.28e-182 Identity = 262/281 (93.24%), Postives = 273/281 (97.15%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. NCBI nr
Match: XP_022954912.1 (uncharacterized protein LOC111457027 [Cucurbita moschata]) HSP 1 Score: 513 bits (1321), Expect = 2.94e-179 Identity = 261/321 (81.31%), Postives = 290/321 (90.34%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. ExPASy TrEMBL
Match: A0A0A0LTQ6 (Glyco_transf_28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042620 PE=4 SV=1) HSP 1 Score: 628 bits (1619), Expect = 1.07e-226 Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. ExPASy TrEMBL
Match: A0A1S3CFT0 (UDP-N-acetylglucosamine--N-acetylmuramyl- (Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Cucumis melo OX=3656 GN=LOC103500410 PE=3 SV=1) HSP 1 Score: 605 bits (1559), Expect = 1.13e-215 Identity = 305/319 (95.61%), Postives = 314/319 (98.43%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. ExPASy TrEMBL
Match: A0A5D3BIV3 (UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002200 PE=3 SV=1) HSP 1 Score: 521 bits (1343), Expect = 6.21e-183 Identity = 262/281 (93.24%), Postives = 273/281 (97.15%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. ExPASy TrEMBL
Match: A0A6J1GS61 (uncharacterized protein LOC111457027 OS=Cucurbita moschata OX=3662 GN=LOC111457027 PE=3 SV=1) HSP 1 Score: 513 bits (1321), Expect = 1.42e-179 Identity = 261/321 (81.31%), Postives = 290/321 (90.34%), Query Frame = 0
BLAST of Cucsat.G14163.T26 vs. ExPASy TrEMBL
Match: A0A6J1K226 (uncharacterized protein LOC111490345 OS=Cucurbita maxima OX=3661 GN=LOC111490345 PE=3 SV=1) HSP 1 Score: 507 bits (1306), Expect = 3.23e-177 Identity = 257/320 (80.31%), Postives = 289/320 (90.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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