Cucsat.G13882.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13882.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Pyruvate decarboxylase
Location	ctg184: 2254251 .. 2255210 (+)
RNA-Seq Expression	Cucsat.G13882.T2
Synteny	Cucsat.G13882.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAGTAACAAATGAAGGAGCAAATTAACTGAAAGTGATGAAATGTGTAGGTATGAGGTACAATTGTTGTATGCATCAATTGGATGGTCTTTGGGAGCAACTTTAGGATATGCACAAGCTGCTCCACACAAGCGTTTACTTCTTTGTATTGGTGATGGAAGTTTTCAGGTCAACTTTTTTATATCAATACATACCTTTCTGCTATATTTGATTTATTATTTTTGTTACATGCTTATTCTAAAGTTCAAATTTAAATACTTTTAATTACTTTTTAACTTTATATTAAAAGGATTATATCGTGACAGATGGCTCCACAAGATGTGTCTACAATGTTAAAATTGGGACAAAAAAATATTATATTTTTGATAAATAATGGGGGATACACAATTGAAGTAGAAATCCACGATGGTCCGTACAATATTATCAATAATTGGGATTACACTGCATTTGTTGACGCTGTAAACAATCATCAAAGCAATTGTTGGACTACAAAGGTGAATTCTCCTCGTACCTTTATTTCTCATGTACACTTTCTATAAATGATTATTTTAAAATAAAATGTTGTTTGCATGTTAGGTTCATACGGAGGAAGAGTTAGTAAATGCAATTGAAATAGCAATGAAAGATCGAAATGATTGTTTGTGTTTCATAGAGGTCATTGCTCATAGAGATGATACAAGTAAAGAGTTACTTGAGTTTGGAAGCAGGATTGCAGCTATGGGTAGTCATCCTCCAAAGCTTTTGAAAAATTGATTTAACAGCATAGTTCAACTGCCTTATGGTAAATATAGTGCAATATTAGTAAGATCAAGAGGTTTTTATGGTCCTTTATATTGATTATATTTTTTATAAAAAAATGTTGGAAATGTGTGCAAATTTATGTAAGAATTTCATCAATATTTTGGCCTTTCTTTTTAAAATTAGGAGATAAACTAAGACCAAATAATATAATATTGAGC

Coding sequence (CDS)

ATGTGTAGGTATGAGGTACAATTGTTGTATGCATCAATTGGATGGTCTTTGGGAGCAACTTTAGGATATGCACAAGCTGCTCCACACAAGCGTTTACTTCTTTGTATTGGTGATGGAAGTTTTCAGATGGCTCCACAAGATGTGTCTACAATGTTAAAATTGGGACAAAAAAATATTATATTTTTGATAAATAATGGGGGATACACAATTGAAGTAGAAATCCACGATGGTCCGTACAATATTATCAATAATTGGGATTACACTGCATTTGTTGACGCTGTAAACAATCATCAAAGCAATTGTTGGACTACAAAGGTTCATACGGAGGAAGAGTTAGTAAATGCAATTGAAATAGCAATGAAAGATCGAAATGATTGTTTGTGTTTCATAGAGGTCATTGCTCATAGAGATGATACAAGTAAAGAGTTACTTGAGTTTGGAAGCAGGATTGCAGCTATGGGTAGTCATCCTCCAAAGCTTTTGAAAAATTGA

Protein sequence

MCRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIFLINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMKDRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN

Homology

[Close]

BLAST of Cucsat.G13882.T2 vs. ExPASy Swiss-Prot
Match: A2Y5L9 (Pyruvate decarboxylase 1 OS=Oryza sativa subsp. indica OX=39946 GN=PDC1 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 7.8e-64
Identity = 111/157 (70.70%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YE Q+ Y SIGWS+GATLGYAQAA  KR++ CIGDGSFQM  QDVSTML+ GQK+IIF
Sbjct: 446 CGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCIGDGSFQMTAQDVSTMLRCGQKSIIF 505

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYN+I NWDYT  +DA++N   NCWT KV TEEEL+ AI  A  
Sbjct: 506 LINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHNSDGNCWTKKVRTEEELIEAIATATG 565

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPP 159
            + DCLCFIE+I H+DDTSKELLE+GSR++A  S PP
Sbjct: 566 AKKDCLCFIEIIVHKDDTSKELLEWGSRVSAANSRPP 602

[Close]

BLAST of Cucsat.G13882.T2 vs. ExPASy Swiss-Prot
Match: Q0DHF6 (Pyruvate decarboxylase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PDC1 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 7.8e-64
Identity = 111/157 (70.70%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YE Q+ Y SIGWS+GATLGYAQAA  KR++ CIGDGSFQM  QDVSTML+ GQK+IIF
Sbjct: 446 CGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCIGDGSFQMTAQDVSTMLRCGQKSIIF 505

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYN+I NWDYT  +DA++N   NCWT KV TEEEL+ AI  A  
Sbjct: 506 LINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHNSDGNCWTKKVRTEEELIEAIATATG 565

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPP 159
            + DCLCFIE+I H+DDTSKELLE+GSR++A  S PP
Sbjct: 566 AKKDCLCFIEIIVHKDDTSKELLEWGSRVSAANSRPP 602

[Close]

BLAST of Cucsat.G13882.T2 vs. ExPASy Swiss-Prot
Match: P51846 (Pyruvate decarboxylase 2 OS=Nicotiana tabacum OX=4097 GN=PDC2 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.1e-62
Identity = 108/157 (68.79%), Postives = 127/157 (80.89%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           CRYE Q+ Y SIGWS+GATLGYAQ+ P KR++ CIGDGSFQ+  QDVSTM++  QKNIIF
Sbjct: 455 CRYEFQMQYGSIGWSVGATLGYAQSVPKKRVISCIGDGSFQVTAQDVSTMIRCEQKNIIF 514

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYN+I NW+YT  VDA++N + NCWT KV TEEEL  AI  A  
Sbjct: 515 LINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGNCWTMKVRTEEELTEAIATATG 574

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPP 159
           ++ DCLCFIEVI H+DDTSKELLE+GSR+ +    PP
Sbjct: 575 EKKDCLCFIEVIVHKDDTSKELLEWGSRVCSANGRPP 611

[Close]

BLAST of Cucsat.G13882.T2 vs. ExPASy Swiss-Prot
Match: O82647 (Pyruvate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=PDC1 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.3e-62
Identity = 110/157 (70.06%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YE Q+ Y SIGWS+GATLGYAQA+P KR+L  IGDGSFQ+  QD+STML+ GQK IIF
Sbjct: 448 CGYEFQMQYGSIGWSVGATLGYAQASPEKRVLAFIGDGSFQVTVQDISTMLRNGQKTIIF 507

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYN+I NW+YT  VDA++N + NCWT KV  EEELV AI  A  
Sbjct: 508 LINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGNCWTAKVRYEEELVEAITTATT 567

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPP 159
           ++ DCLCFIEVI H+DDTSKELLE+GSR++A  S PP
Sbjct: 568 EKKDCLCFIEVILHKDDTSKELLEWGSRVSAANSRPP 604

[Close]

BLAST of Cucsat.G13882.T2 vs. ExPASy Swiss-Prot
Match: P28516 (Pyruvate decarboxylase 1 OS=Zea mays OX=4577 GN=PDC1 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 5.6e-62
Identity = 109/157 (69.43%), Postives = 127/157 (80.89%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YE Q+ Y SIGWS+GATLGYAQAA  KR++ CIGDGSFQ+  QDVSTML+ GQK+IIF
Sbjct: 451 CGYEFQMQYGSIGWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQDVSTMLRCGQKSIIF 510

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYN+I NWDYT  V+A++N + NCWT KV TEE+L  AI     
Sbjct: 511 LINNGGYTIEVEIHDGPYNVIKNWDYTGLVNAIHNSEGNCWTMKVRTEEQLKEAIATVTG 570

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPP 159
            + DCLCFIEVI H+DDTSKELLE+GSR++A  S PP
Sbjct: 571 AKKDCLCFIEVIVHKDDTSKELLEWGSRVSAANSRPP 607

[Close]

BLAST of Cucsat.G13882.T2 vs. NCBI nr
Match: XP_004148631.3 (pyruvate decarboxylase 1 [Cucumis sativus] >KGN54392.1 hypothetical protein Csa_018074 [Cucumis sativus])

HSP 1 Score: 336 bits (861), Expect = 8.35e-110
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF
Sbjct: 479 CGYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 538

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK
Sbjct: 539 LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 598

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN 163
           DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN
Sbjct: 599 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN 640

[Close]

BLAST of Cucsat.G13882.T2 vs. NCBI nr
Match: XP_008464214.1 (PREDICTED: LOW QUALITY PROTEIN: pyruvate decarboxylase 1-like [Cucumis melo])

HSP 1 Score: 318 bits (814), Expect = 8.64e-103
Identity = 150/162 (92.59%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YE+QLLYASIGWSLGATLGYAQ+AP KRL+LCIGDGSFQMAPQDVSTMLKLGQ NIIF
Sbjct: 476 CGYEIQLLYASIGWSLGATLGYAQSAPQKRLVLCIGDGSFQMAPQDVSTMLKLGQNNIIF 535

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYNIINNWDYTAFV+AVNNHQ NCWTTKVHTEEELV AIEIAM+
Sbjct: 536 LINNGGYTIEVEIHDGPYNIINNWDYTAFVEAVNNHQGNCWTTKVHTEEELVRAIEIAME 595

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN 163
           DRNDCLCF EVI HRDDTSKELLEFGSRIAAMGSHPPKLLKN
Sbjct: 596 DRNDCLCFTEVIVHRDDTSKELLEFGSRIAAMGSHPPKLLKN 637

[Close]

BLAST of Cucsat.G13882.T2 vs. NCBI nr
Match: KAA0037740.1 (pyruvate decarboxylase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (806), Expect = 4.00e-102
Identity = 149/160 (93.12%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 4   YEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIFLI 63
           YE+QLLYASIGWSLGATLGYAQ+AP KRL+LCIGDGSFQMAPQDVSTMLKLGQ NIIFLI
Sbjct: 431 YEIQLLYASIGWSLGATLGYAQSAPQKRLVLCIGDGSFQMAPQDVSTMLKLGQNNIIFLI 490

Query: 64  NNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMKDR 123
           NNGGYTIEVEIHDGPYNIINNWDYTAFV+AVNNHQ NCWTTKVHTEEELV AIEIAM+DR
Sbjct: 491 NNGGYTIEVEIHDGPYNIINNWDYTAFVEAVNNHQGNCWTTKVHTEEELVRAIEIAMEDR 550

Query: 124 NDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN 163
           NDCLCF EVI HRDDTSKELLEFGSRIAAMGSHPPKLLKN
Sbjct: 551 NDCLCFTEVIVHRDDTSKELLEFGSRIAAMGSHPPKLLKN 590

[Close]

BLAST of Cucsat.G13882.T2 vs. NCBI nr
Match: TYK29658.1 (pyruvate decarboxylase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (808), Expect = 6.85e-102
Identity = 150/162 (92.59%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YE+QLLYASIGWSLGATLGYAQ+AP KRL+LCIGDGSFQMAPQDVSTMLKLGQ NIIF
Sbjct: 476 CGYEIQLLYASIGWSLGATLGYAQSAPQKRLVLCIGDGSFQMAPQDVSTMLKLGQNNIIF 535

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYNIINNWDYTAFV+AVNNHQ NCWTTKVHTEEELV AIEIAM+
Sbjct: 536 LINNGGYTIEVEIHDGPYNIINNWDYTAFVEAVNNHQGNCWTTKVHTEEELVRAIEIAME 595

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN 163
           DRND LCFIEVI HRDDTSKELLEFGSRIAAMGSHPPKLLKN
Sbjct: 596 DRNDYLCFIEVIVHRDDTSKELLEFGSRIAAMGSHPPKLLKN 637

[Close]

BLAST of Cucsat.G13882.T2 vs. NCBI nr
Match: XP_038882334.1 (pyruvate decarboxylase 2-like [Benincasa hispida])

HSP 1 Score: 284 bits (726), Expect = 7.52e-93
Identity = 133/160 (83.12%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YE+QLLYASIGWSLGATLGYAQAAP +R++LCIGDGSFQM PQDVSTML+LGQ NIIF
Sbjct: 208 CGYEIQLLYASIGWSLGATLGYAQAAPKERVVLCIGDGSFQMTPQDVSTMLRLGQNNIIF 267

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYN+I NWDYTA VDA++N + NCWTTKVHTE+ELVNAIEIA  
Sbjct: 268 LINNGGYTIEVEIHDGPYNVIKNWDYTAIVDAMDNREGNCWTTKVHTEKELVNAIEIATG 327

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLL 161
           DRNDCLCFIEVI HRDDTSKELLEFGS+I A+GS P  LL
Sbjct: 328 DRNDCLCFIEVIVHRDDTSKELLEFGSKIVAIGSCPSNLL 367

[Close]

BLAST of Cucsat.G13882.T2 vs. ExPASy TrEMBL
Match: A0A0A0L1C6 (Pyruvate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_4G312250 PE=3 SV=1)

HSP 1 Score: 336 bits (861), Expect = 4.04e-110
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF
Sbjct: 479 CGYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 538

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK
Sbjct: 539 LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 598

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN 163
           DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN
Sbjct: 599 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN 640

[Close]

BLAST of Cucsat.G13882.T2 vs. ExPASy TrEMBL
Match: A0A1S3CKY9 (Pyruvate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103502149 PE=3 SV=1)

HSP 1 Score: 318 bits (814), Expect = 4.18e-103
Identity = 150/162 (92.59%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YE+QLLYASIGWSLGATLGYAQ+AP KRL+LCIGDGSFQMAPQDVSTMLKLGQ NIIF
Sbjct: 476 CGYEIQLLYASIGWSLGATLGYAQSAPQKRLVLCIGDGSFQMAPQDVSTMLKLGQNNIIF 535

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYNIINNWDYTAFV+AVNNHQ NCWTTKVHTEEELV AIEIAM+
Sbjct: 536 LINNGGYTIEVEIHDGPYNIINNWDYTAFVEAVNNHQGNCWTTKVHTEEELVRAIEIAME 595

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN 163
           DRNDCLCF EVI HRDDTSKELLEFGSRIAAMGSHPPKLLKN
Sbjct: 596 DRNDCLCFTEVIVHRDDTSKELLEFGSRIAAMGSHPPKLLKN 637

[Close]

BLAST of Cucsat.G13882.T2 vs. ExPASy TrEMBL
Match: A0A5A7T2Y2 (Pyruvate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00360 PE=3 SV=1)

HSP 1 Score: 315 bits (806), Expect = 1.94e-102
Identity = 149/160 (93.12%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 4   YEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIFLI 63
           YE+QLLYASIGWSLGATLGYAQ+AP KRL+LCIGDGSFQMAPQDVSTMLKLGQ NIIFLI
Sbjct: 431 YEIQLLYASIGWSLGATLGYAQSAPQKRLVLCIGDGSFQMAPQDVSTMLKLGQNNIIFLI 490

Query: 64  NNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMKDR 123
           NNGGYTIEVEIHDGPYNIINNWDYTAFV+AVNNHQ NCWTTKVHTEEELV AIEIAM+DR
Sbjct: 491 NNGGYTIEVEIHDGPYNIINNWDYTAFVEAVNNHQGNCWTTKVHTEEELVRAIEIAMEDR 550

Query: 124 NDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN 163
           NDCLCF EVI HRDDTSKELLEFGSRIAAMGSHPPKLLKN
Sbjct: 551 NDCLCFTEVIVHRDDTSKELLEFGSRIAAMGSHPPKLLKN 590

[Close]

BLAST of Cucsat.G13882.T2 vs. ExPASy TrEMBL
Match: A0A5D3E1K9 (Pyruvate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold669G00080 PE=3 SV=1)

HSP 1 Score: 315 bits (808), Expect = 3.32e-102
Identity = 150/162 (92.59%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YE+QLLYASIGWSLGATLGYAQ+AP KRL+LCIGDGSFQMAPQDVSTMLKLGQ NIIF
Sbjct: 476 CGYEIQLLYASIGWSLGATLGYAQSAPQKRLVLCIGDGSFQMAPQDVSTMLKLGQNNIIF 535

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYNIINNWDYTAFV+AVNNHQ NCWTTKVHTEEELV AIEIAM+
Sbjct: 536 LINNGGYTIEVEIHDGPYNIINNWDYTAFVEAVNNHQGNCWTTKVHTEEELVRAIEIAME 595

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLLKN 163
           DRND LCFIEVI HRDDTSKELLEFGSRIAAMGSHPPKLLKN
Sbjct: 596 DRNDYLCFIEVIVHRDDTSKELLEFGSRIAAMGSHPPKLLKN 637

[Close]

BLAST of Cucsat.G13882.T2 vs. ExPASy TrEMBL
Match: A0A6J1CS04 (Pyruvate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111013786 PE=3 SV=1)

HSP 1 Score: 278 bits (710), Expect = 6.96e-88
Identity = 130/160 (81.25%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 2   CRYEVQLLYASIGWSLGATLGYAQAAPHKRLLLCIGDGSFQMAPQDVSTMLKLGQKNIIF 61
           C YEVQLLYASIGWSLGATLGYAQAAP +R++LCIGDGSFQM+PQDVSTML+LGQKNIIF
Sbjct: 447 CGYEVQLLYASIGWSLGATLGYAQAAPQQRVVLCIGDGSFQMSPQDVSTMLRLGQKNIIF 506

Query: 62  LINNGGYTIEVEIHDGPYNIINNWDYTAFVDAVNNHQSNCWTTKVHTEEELVNAIEIAMK 121
           LINNGGYTIEVEIHDGPYN+I NWDYTA V+A++N    CWT KVHTEEELV AIE A K
Sbjct: 507 LINNGGYTIEVEIHDGPYNVIKNWDYTAMVNAMHNQDGKCWTAKVHTEEELVKAIETATK 566

Query: 122 DRNDCLCFIEVIAHRDDTSKELLEFGSRIAAMGSHPPKLL 161
           DRNDCLCFIE I HRDDTSKELLEFGS+IAA+   PP+ L
Sbjct: 567 DRNDCLCFIEAILHRDDTSKELLEFGSKIAAISCRPPRPL 606

The following BLAST results are available for this feature:

BLAST of Cucsat.G13882.T2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2Y5L9	7.8e-64	70.70	Pyruvate decarboxylase 1 OS=Oryza sativa subsp. indica OX=39946 GN=PDC1 PE=2 SV=...	[more]
Q0DHF6	7.8e-64	70.70	Pyruvate decarboxylase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PDC1 PE=2 S...	[more]
P51846	1.1e-62	68.79	Pyruvate decarboxylase 2 OS=Nicotiana tabacum OX=4097 GN=PDC2 PE=2 SV=1	[more]
O82647	3.3e-62	70.06	Pyruvate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=PDC1 PE=2 SV=1	[more]
P28516	5.6e-62	69.43	Pyruvate decarboxylase 1 OS=Zea mays OX=4577 GN=PDC1 PE=2 SV=1	[more]

BLAST of Cucsat.G13882.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148631.3	8.35e-110	99.38	pyruvate decarboxylase 1 [Cucumis sativus] >KGN54392.1 hypothetical protein Csa_...	[more]
XP_008464214.1	8.64e-103	92.59	PREDICTED: LOW QUALITY PROTEIN: pyruvate decarboxylase 1-like [Cucumis melo]	[more]
KAA0037740.1	4.00e-102	93.13	pyruvate decarboxylase 1-like [Cucumis melo var. makuwa]	[more]
TYK29658.1	6.85e-102	92.59	pyruvate decarboxylase 1-like [Cucumis melo var. makuwa]	[more]
XP_038882334.1	7.52e-93	83.13	pyruvate decarboxylase 2-like [Benincasa hispida]	[more]

BLAST of Cucsat.G13882.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1C6	4.04e-110	99.38	Pyruvate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_4G312250 PE=3 SV=1	[more]
A0A1S3CKY9	4.18e-103	92.59	Pyruvate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103502149 PE=3 SV=1	[more]
A0A5A7T2Y2	1.94e-102	93.13	Pyruvate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]
A0A5D3E1K9	3.32e-102	92.59	Pyruvate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6...	[more]
A0A6J1CS04	6.96e-88	81.25	Pyruvate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111013786 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011766	Thiamine pyrophosphate enzyme, C-terminal TPP-binding	PFAM	PF02775	TPP_enzyme_C	coord: 9..131 e-value: 2.3E-13 score: 50.2
None	No IPR available	GENE3D	3.40.50.970		coord: 1..143 e-value: 3.5E-41 score: 142.8
None	No IPR available	PANTHER	PTHR43452:SF25	PYRUVATE DECARBOXYLASE 1	coord: 2..159
None	No IPR available	CDD	cd02005	TPP_PDC_IPDC	coord: 2..144 e-value: 2.6171E-66 score: 198.142
IPR012110	Thiamine pyrophosphate (TPP)-dependent enzyme	PANTHER	PTHR43452	PYRUVATE DECARBOXYLASE	coord: 2..159
IPR029061	Thiamin diphosphate-binding fold	SUPERFAMILY	52518	Thiamin diphosphate-binding fold (THDP-binding)	coord: 3..155

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13882	Cucsat.G13882	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13882.T2.E1	Cucsat.G13882.T2.E1	exon
Cucsat.G13882.T2.E2	Cucsat.G13882.T2.E2	exon
Cucsat.G13882.T2.E3	Cucsat.G13882.T2.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13882.T2.C1	Cucsat.G13882.T2.C1	CDS
Cucsat.G13882.T2.C2	Cucsat.G13882.T2.C2	CDS
Cucsat.G13882.T2.C3	Cucsat.G13882.T2.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13882.T2	Cucsat.G13882.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016831	carboxy-lyase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0030976	thiamine pyrophosphate binding
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004737	pyruvate decarboxylase activity