Cucsat.G13731.T9 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G13731.T9
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionproteasome assembly chaperone 4
Locationctg184: 1730283 .. 1733392 (-)
RNA-Seq ExpressionCucsat.G13731.T9
SyntenyCucsat.G13731.T9
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCAAAAGAATAAGCGATTTTACATTTTTCAAAATCACCATGTTATATCTCTTATTATGTATTGTTTATATGTTGTGCACTGGACACTTATATAGGTTTGAGTTTTGAATTGGTCTCCATGTTTTAAAATTCACTAAATAGTATTCTTTATCGTTCTTCAATTCTTTATTCCTTTCTTATTTGCACTTCTGTGTCTTCCATTGTTTTTGATTGCTTGTTTCGTTTCTTCTTGGATTGAGAATTGAGATACTTCCCCCAATTTTGGTGTGTTTTTCTTTCATTTAGTTCATAGGGTGCCCTAAACCCTCATGAATTGTCCCTTTTTTTCTTTTTTTTAGTATTTGAATTTGAACATTTTAAAACTATATTTTAATCTGTTTAGAAATCTCATTCAGAAGACCAGCTTCTTCTGTTCGTCCTTGGGTTCTCATCTCAACCCTCACTGTCGCTCCTTTTCTCGCAACGACGCCACCCATTCGTCCTTCAATTGAGTTCGTGTTCTTCACAGCTTAGGGGGTTTGGAGAAGACGAAGGTAACTCTGCTTCTTCTTGTTTATGAGTTAATGTTTGTGGGAAAGGTTATTAAGAAGAAGAATAAAAAGAATAGTTTTTTGTTTGTGGAGAAAATTGAAGAAAAAGAAGAAGATTTGATTGTTGATTTTTCGATCCGGGTCGGGCTTCATTACCACCGCCCCTACTCTTCCATTCCTTTTCTCTACCGAAACGAATCGAACTTGTCACCAGCGGATAGCACGCACCCCCCACCACTAACAAGCTACCAACGTTTCGGTACCGCCCCCACTCAAGTTGACTCTATAAAACTATTTGTTTCTGGGGTTGGATTTGTATACTCTTGTCTTAACTGGAATTCGAATCCACTCGGTCATTATATTTCAACATTGCGATATGCTGGAATTTGATATCATTGAGTCTAGATTAGAAACTTTGAAAATTTCACTTGGAGTTGTATGTTTGCATCTGATGCTCCAATCTGAATCAAGTGTATGTTTCCAATGGTGCTTAATTATATTATTCTTTTTCTTTTAATATTAGTTTGTCTGTTATTGTTTAAGACTTGGAGATGACGCTTGTGCGCAATTTTTCTACATAAAACTGAGATAAGATCAATATTGTAGTTTTTTAGTTTGTTTCTTTTTCTTTGTTTAGGTTGATAAAAATGTTACATGAAGGTCAAATCTCGAAAGAAGAACAGTCATTTGCTAGTCCATCAAATAGCAATAGCAATGGTAACCTTGATGGTGTTCGGGTTACTTGCTTCAGTGAAGCCATAAATGATGTCCCCATCCATTTTCAGATTATATGTCTTTCCAAACAGGTTTTCCATGGGTTTCCTAAACCTTCCTTTGTTAGAATCAGTGTGTTAAATATTTCAAAGTTCAGTTTCTTGATGTTCTTTTCTGTCTTGTTTGTTTGTTTTTATTTTTAATCTGTAGATATACGTATGGATTGGTTGCAATTCTGCAAAATTTGGAAATTTGTATGCAGCTGCCCCCACACGACCTGTAAGTTGAGCCCTTCTACACTTTTTTCTGAAGAAAGAAACACTGATTGACTGTTTCTCTTTGAAGCACTTTAAAGTTTAACTAGTGGGTATAATCTGTTTCTCTTGGAAGCACTTTAAAGTTTAACTAGTGGGTATAATCGGCTAAAGATGCTTTCAACCATTCCAAAAGCTTTTTTTTTTTTTTTTGTTAATTTTATGTAATTTCTGTTTCACTTTTGGTGTTTTGAAAAGCCCTCCTGAGCAAGTGCCTAGGTACTAGGCATATCCTCGCCGTGAACCTGCACTTTGTTTTTTCCTTGGGCCATATGCTTAAGCCCCAAAAACCTGGTGCATATTGCGCCTTGAACATTAAAAAGAATGCGTGCTCCTCAACTTTTCCTTTGTCAATTCTTCAATAATATCAACGCATAATCCTTGCTCACAGTCATTAATATTTTGCCACTGAAATCTTGCAGAACAATACAGTGAGTGTTACTTCCATACTTGGAGGTTCATCCGATAATACAGGATCTAGCATGGCACGTAGACTAGGTAGTATGTAAATCTAGTTTTGAACTCTGAATATTCAAGATGTCATGTCTTCTAGTGATCCTACTGATACACTTGTTTTCTCTTTTCCTAGTGTTAAAAACCGGTCTAAATATCATCTTGGCTAGCAATATTCCGAAAAACAGCCCCATAATCGAGGTTCGATTACCCTCCTCTTTCTTACTGTTTTTTCTTAGAGATGAATTAGGCATGAGATAATTGGCCTATGAAAGAACCATACCAGAATATTTTGTTCGATTGATAATCACTCAATCCTTTTTTTTATCAGTATGTTGGGTTTGTTATCTACTTCATAAAAACATGTAGTATGTTGGCTTTGTTATCTGCTTCATAAAAATGTCTTAAAAATGTAAGTCAATTTTGACTACTGAAAAAGAAAATAGTTTACTAAAACTTGAGCTTTGTTTTATAAATTCTATACAAATTCTAGTGCCTTAAAATTTGAAATTTAAATAAATGAGAAATAAAAAACTAAATGGTTATCAAGTAGAGTTCAATCATTATCACACTTTCACGTTTTGGATTCCTACTTAGCTGTTATTTTTGTTTGATCATTTTAGGTCGCTGCCGAAAAGGTATTAGTGCAAAAGCTGGTCACTTTAGGGTACGTAAGGCCTAAACCAGAAGGTCCATCTAGATAATTGGTTCCCATGATTAGTCTTCTTTGCAAGATCCAGAGAAGCCTTACTCTGGTTGCTAGCTGTTTTCTTCTTTGCAACCTTATAGCTGAAACTCCAGGCTTGAATCTAGGCTAGGATTTTGGAGGACGATATACCCAAACATACAGCCTATCAAGGCACTCAACGGGGTTCTATTTTACTTGGATCTTGCTTGGATATTTATTAAGAACATTATCCATTTTTTGTTATAATATTGGATAAATCGATAGCTAACTACAAAACGGTGTAAATACGTTGTAATTTGTTTAATAGATTGTTTATCTCTTCCCTGTTATCATCTTGTTTAATCTTATTTGGTTGTCCATTTTCACTAGTTTTCTTCATTTTCAGAAATGAAACTGGTATTTATTTGAT

Coding sequence (CDS)

ATGTTTGTGGGAAAGGTTATTAAGAAGAAGAATAAAAAGAATAGTTTTTTGTTTGTGGAGAAAATTGAAGAAAAAGAAGAAGATTTGATTGTTGATTTTTCGATCCGGGTCGGGCTTCATTACCACCGCCCCTACTCTTCCATTCCTTTTCTCTACCGAAACGAATCGAACTTGTCACCAGCGGATAGCACGCACCCCCCACCACTAACAAGCTACCAACGTTTCGGTACCGCCCCCACTCAAGTTGACTCTATAAAACTATTTGTTTCTGGGGTTGGATTTGTATACTCTTGTCTTAACTGGAATTCGAATCCACTCGGTCATTATATTTCAACATTGCGATATGCTGGAATTTGA

Protein sequence

MFVGKVIKKKNKKNSFLFVEKIEEKEEDLIVDFSIRVGLHYHRPYSSIPFLYRNESNLSPADSTHPPPLTSYQRFGTAPTQVDSIKLFVSGVGFVYSCLNWNSNPLGHYISTLRYAGI
Homology
The following BLAST results are available for this feature:
BLAST of Cucsat.G13731.T9 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G13731.T9 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G13731.T9 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G13731Cucsat.G13731gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13731.T9.E1Cucsat.G13731.T9.E1exon
Cucsat.G13731.T9.E2Cucsat.G13731.T9.E2exon
Cucsat.G13731.T9.E3Cucsat.G13731.T9.E3exon
Cucsat.G13731.T9.E4Cucsat.G13731.T9.E4exon
Cucsat.G13731.T9.E5Cucsat.G13731.T9.E5exon
Cucsat.G13731.T9.E6Cucsat.G13731.T9.E6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13731.T9.C1Cucsat.G13731.T9.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G13731.T9Cucsat.G13731.T9-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043248 proteasome assembly
cellular_component GO:0000502 proteasome complex