Cucsat.G13731.T20 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G13731.T20
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionproteasome assembly chaperone 4
Locationctg184: 1730269 .. 1733339 (-)
RNA-Seq ExpressionCucsat.G13731.T20
SyntenyCucsat.G13731.T20
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATTATGTATTGTTTATATGTTGTGCACTGGACACTTATATAGGTTTGAGTTTTGAATTGGTCTCCATGTTTTAAAATTCACTAAATAGTATTCTTTATCGTTCTTCAATTCTTTATTCCTTTCTTATTTGCACTTCTGTGTCTTCCATTGTTTTTGATTGCTTGTTTCGTTTCTTCTTGGATTGAGAATTGAGATACTTCCCCCAATTTTGGTGTGTTTTTCTTTCATTTAGTTCATAGGGTGCCCTAAACCCTCATGAATTGTCCCTTTTTTTCTTTTTTTTAGTATTTGAATTTGAACATTTTAAAACTATATTTTAATCTGTTTAGAAATCTCATTCAGAAGACCAGCTTCTTCTGTTCGTCCTTGGGTTCTCATCTCAACCCTCACTGTCGCTCCTTTTCTCGCAACGACGCCACCCATTCGTCCTTCAATTGAGTTCGTGTTCTTCACAGCTTAGGGGGTTTGGAGAAGACGAAGGTAACTCTGCTTCTTCTTGTTTATGAGTTAATGTTTGTGGGAAAGGTTATTAAGAAGAAGAATAAAAAGAATAGTTTTTTGTTTGTGGAGAAAATTGAAGAAAAAGAAGAAGATTTGATTGTTGATTTTTCGATCCGGGTCGGGCTTCATTACCACCGCCCCTACTCTTCCATTCCTTTTCTCTACCGAAACGAATCGAACTTGTCACCAGCGGATAGCACGCACCCCCCACCACTAACAAGCTACCAACGTTTCGGTACCGCCCCCACTCAAGTTGACTCTATAAAACTATTTGTTTCTGGGGTTGGATTTGTATACTCTTGTCTTAACTGGAATTCGAATCCACTCGGTCATTATATTTCAACATTGCGATATGCTGGAATTTGATATCATTGAGTCTAGATTAGAAACTTTGAAAATTTCACTTGGAGTTGTATGTTTGCATCTGATGCTCCAATCTGAATCAAGTGTATGTTTCCAATGGTGCTTAATTATATTATTCTTTTTCTTTTAATATTAGTTTGTCTGTTATTGTTTAAGACTTGGAGATGACGCTTGTGCGCAATTTTTCTACATAAAACTGAGATAAGATCAATATTGTAGTTTTTTAGTTTGTTTCTTTTTCTTTGTTTAGGTTGATAAAAATGTTACATGAAGGTCAAATCTCGAAAGAAGAACAGTCATTTGCTAGTCCATCAAATAGCAATAGCAATGGTAACCTTGATGGTGTTCGGGTTACTTGCTTCAGTGAAGCCATAAATGATGTCCCCATCCATTTTCAGATTATATGTCTTTCCAAACAGGTTTTCCATGGGTTTCCTAAACCTTCCTTTGTTAGAATCAGTGTGTTAAATATTTCAAAGTTCAGTTTCTTGATGTTCTTTTCTGTCTTGTTTGTTTGTTTTTATTTTTAATCTGTAGATATACGTATGGATTGGTTGCAATTCTGCAAAATTTGGAAATTTGTATGCAGCTGCCCCCACACGACCTGTAAGTTGAGCCCTTCTACACTTTTTTCTGAAGAAAGAAACACTGATTGACTGTTTCTCTTTGAAGCACTTTAAAGTTTAACTAGTGGGTATAATCTGTTTCTCTTGGAAGCACTTTAAAGTTTAACTAGTGGGTATAATCGGCTAAAGATGCTTTCAACCATTCCAAAAGCTTTTTTTTTTTTTTTTGTTAATTTTATGTAATTTCTGTTTCACTTTTGGTGTTTTGAAAAGCCCTCCTGAGCAAGTGCCTAGGTACTAGGCATATCCTCGCCGTGAACCTGCACTTTGTTTTTTCCTTGGGCCATATGCTTAAGCCCCAAAAACCTGGTGCATATTGCGCCTTGAACATTAAAAAGAATGCGTGCTCCTCAACTTTTCCTTTGTCAATTCTTCAATAATATCAACGCATAATCCTTGCTCACAGTCATTAATATTTTGCCACTGAAATCTTGCAGAACAATACAGTGAGTGTTACTTCCATACTTGGAGGTTCATCCGATAATACAGGATCTAGCATGGCACGTAGACTAGGTAGTATGTAAATCTAGTTTTGAACTCTGAATATTCAAGATGTCATGTCTTCTAGTGATCCTACTGATACACTTGTTTTCTCTTTTCCTAGTGTTAAAAACCGGTCTAAATATCATCTTGGCTAGCAATATTCCGAAAAACAGCCCCATAATCGAGGTTCGATTACCCTCCTCTTTCTTACTGTTTTTTCTTAGAGATGAATTAGGCATGAGATAATTGGCCTATGAAAGAACCATACCAGAATATTTTGTTCGATTGATAATCACTCAATCCTTTTTTTTATCAGTATGTTGGGTTTGTTATCTACTTCATAAAAACATGTAGTATGTTGGCTTTGTTATCTGCTTCATAAAAATGTCTTAAAAATGTAAGTCAATTTTGACTACTGAAAAAGAAAATAGTTTACTAAAACTTGAGCTTTGTTTTATAAATTCTATACAAATTCTAGTGCCTTAAAATTTGAAATTTAAATAAATGAGAAATAAAAAACTAAATGGTTATCAAGTAGAGTTCAATCATTATCACACTTTCACGTTTTGGATTCCTACTTAGCTGTTATTTTTGTTTGATCATTTTAGGTCGCTGCCGAAAAGGTATTAGTGCAAAAGCTGGTCACTTTAGGGTACGTAAGGCCTAAACCAGAAGGTCCATCTAGATAATTGGTTCCCATGATTAGTCTTCTTTGCAAGATCCAGAGAAGCCTTACTCTGGTTGCTAGCTGTTTTCTTCTTTGCAACCTTATAGCTGAAACTCCAGGCTTGAATCTAGGCTAGGATTTTGGAGGACGATATACCCAAACATACAGCCTATCAAGGCACTCAACGGGGTTCTATTTTACTTGGATCTTGCTTGGATATTTATTAAGAACATTATCCATTTTTTGTTATAATATTGGATAAATCGATAGCTAACTACAAAACGGTGTAAATACGTTGTAATTTGTTTAATAGATTGTTTATCTCTTCCCTGTTATCATCTTGTTTAATCTTATTTGGTTGTCCATTTTCACTAGTTTTCTTCATTTTCAGAAATGAAACTGGTATTTATTTGATTCATTTTTCATTGG

Coding sequence (CDS)

ATGTTACATGAAGGTCAAATCTCGAAAGAAGAACAGTCATTTGCTAGTCCATCAAATAGCAATAGCAATGGTAACCTTGATGGTGTTCGGGTTACTTGCTTCAGTGAAGCCATAAATGATGTCCCCATCCATTTTCAGATTATATGTCTTTCCAAACAGATATACGTATGGATTGGTTGCAATTCTGCAAAATTTGGAAATTTGTATGCAGCTGCCCCCACACGACCTAACAATACAGTGAGTGTTACTTCCATACTTGGAGGTTCATCCGATAATACAGGATCTAGCATGGCACGTAGACTAGGTAGTATGTAA

Protein sequence

MLHEGQISKEEQSFASPSNSNSNGNLDGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRLGSM
Homology
[Close]
BLAST of Cucsat.G13731.T20 vs. NCBI nr
Match: XP_004147905.1 (proteasome assembly chaperone 4 [Cucumis sativus] >XP_011653669.1 proteasome assembly chaperone 4 [Cucumis sativus] >XP_011653670.1 proteasome assembly chaperone 4 [Cucumis sativus] >XP_031740248.1 proteasome assembly chaperone 4 [Cucumis sativus] >KGN54334.1 hypothetical protein Csa_017960 [Cucumis sativus])

HSP 1 Score: 197 bits (502), Expect = 6.78e-63
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 1   MLHEGQISKEEQSFASPSNSNSNGNLDGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGC 60
           MLHEGQISKEEQSFASPSNSNSNGNLD VRVTCFSEAINDVPIHFQIICLSKQIYVWIGC
Sbjct: 1   MLHEGQISKEEQSFASPSNSNSNGNLDDVRVTCFSEAINDVPIHFQIICLSKQIYVWIGC 60

Query: 61  NSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101
           NSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL
Sbjct: 61  NSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101

[Close]
BLAST of Cucsat.G13731.T20 vs. NCBI nr
Match: XP_008448802.1 (PREDICTED: proteasome assembly chaperone 4 [Cucumis melo])

HSP 1 Score: 185 bits (470), Expect = 5.43e-58
Identity = 95/103 (92.23%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MLHEGQISKEEQSFASPSNSNSNGNLDG--VRVTCFSEAINDVPIHFQIICLSKQIYVWI 60
           MLHEGQISKEEQ  ASPS+SNSN NLDG  VRVTCFSEAINDVPIHFQIICLSKQIY+WI
Sbjct: 1   MLHEGQISKEEQPLASPSSSNSNDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYIWI 60

Query: 61  GCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101
           GCNSAKFGNLYAAAPTRPNNTVSVTS+LGGSSDNTGSSMARRL
Sbjct: 61  GCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSSMARRL 103

[Close]
BLAST of Cucsat.G13731.T20 vs. NCBI nr
Match: KAA0045091.1 (proteasome assembly chaperone 4 [Cucumis melo var. makuwa] >TYJ96236.1 proteasome assembly chaperone 4 [Cucumis melo var. makuwa])

HSP 1 Score: 185 bits (470), Expect = 1.33e-57
Identity = 95/103 (92.23%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MLHEGQISKEEQSFASPSNSNSNGNLDG--VRVTCFSEAINDVPIHFQIICLSKQIYVWI 60
           MLHEGQISKEEQ  ASPS+SNSN NLDG  VRVTCFSEAINDVPIHFQIICLSKQIY+WI
Sbjct: 1   MLHEGQISKEEQPLASPSSSNSNDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYIWI 60

Query: 61  GCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101
           GCNSAKFGNLYAAAPTRPNNTVSVTS+LGGSSDNTGSSMARRL
Sbjct: 61  GCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSSMARRL 103

[Close]
BLAST of Cucsat.G13731.T20 vs. NCBI nr
Match: XP_038881184.1 (proteasome assembly chaperone 4 [Benincasa hispida])

HSP 1 Score: 173 bits (438), Expect = 4.06e-53
Identity = 90/103 (87.38%), Postives = 96/103 (93.20%), Query Frame = 0 

Query: 1   MLHEGQISKEEQSFASPSNSNSNGNLDG--VRVTCFSEAINDVPIHFQIICLSKQIYVWI 60
           ML++GQISKEEQ  +SPS SN++ NLDG  V+VTCFSEAINDVPIHFQIICLSKQIYVWI
Sbjct: 1   MLYQGQISKEEQPVSSPSISNNDDNLDGGGVQVTCFSEAINDVPIHFQIICLSKQIYVWI 60

Query: 61  GCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101
           GCNSAK GNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL
Sbjct: 61  GCNSAKIGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 103

[Close]
BLAST of Cucsat.G13731.T20 vs. NCBI nr
Match: KAG7018546.1 (Proteasome assembly chaperone 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 161 bits (407), Expect = 2.19e-48
Identity = 84/104 (80.77%), Postives = 95/104 (91.35%), Query Frame = 0 

Query: 1   MLHEGQISKEEQSFASPSNSNSNGN-LDG--VRVTCFSEAINDVPIHFQIICLSKQIYVW 60
           MLH+ QISK+EQ+ ASPS+SN++ + LDG  ++VTCFSEAINDVPIHFQII L KQIY W
Sbjct: 1   MLHQAQISKDEQTLASPSSSNNDDHHLDGGSIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60

Query: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101
           IGCNSAKFGNLYAAAPTRPNNTVSVTS+LGGSSDNTGS+MARRL
Sbjct: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRL 104

[Close]
BLAST of Cucsat.G13731.T20 vs. ExPASy TrEMBL
Match: A0A0A0KZU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G304800 PE=4 SV=1)

HSP 1 Score: 197 bits (502), Expect = 3.28e-63
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 1   MLHEGQISKEEQSFASPSNSNSNGNLDGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGC 60
           MLHEGQISKEEQSFASPSNSNSNGNLD VRVTCFSEAINDVPIHFQIICLSKQIYVWIGC
Sbjct: 1   MLHEGQISKEEQSFASPSNSNSNGNLDDVRVTCFSEAINDVPIHFQIICLSKQIYVWIGC 60

Query: 61  NSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101
           NSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL
Sbjct: 61  NSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101

[Close]
BLAST of Cucsat.G13731.T20 vs. ExPASy TrEMBL
Match: A0A1S3BJY7 (proteasome assembly chaperone 4 OS=Cucumis melo OX=3656 GN=LOC103490859 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 2.63e-58
Identity = 95/103 (92.23%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MLHEGQISKEEQSFASPSNSNSNGNLDG--VRVTCFSEAINDVPIHFQIICLSKQIYVWI 60
           MLHEGQISKEEQ  ASPS+SNSN NLDG  VRVTCFSEAINDVPIHFQIICLSKQIY+WI
Sbjct: 1   MLHEGQISKEEQPLASPSSSNSNDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYIWI 60

Query: 61  GCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101
           GCNSAKFGNLYAAAPTRPNNTVSVTS+LGGSSDNTGSSMARRL
Sbjct: 61  GCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSSMARRL 103

[Close]
BLAST of Cucsat.G13731.T20 vs. ExPASy TrEMBL
Match: A0A5D3BBH2 (Proteasome assembly chaperone 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00260 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 6.44e-58
Identity = 95/103 (92.23%), Postives = 98/103 (95.15%), Query Frame = 0 

Query: 1   MLHEGQISKEEQSFASPSNSNSNGNLDG--VRVTCFSEAINDVPIHFQIICLSKQIYVWI 60
           MLHEGQISKEEQ  ASPS+SNSN NLDG  VRVTCFSEAINDVPIHFQIICLSKQIY+WI
Sbjct: 1   MLHEGQISKEEQPLASPSSSNSNDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYIWI 60

Query: 61  GCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101
           GCNSAKFGNLYAAAPTRPNNTVSVTS+LGGSSDNTGSSMARRL
Sbjct: 61  GCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSSMARRL 103

[Close]
BLAST of Cucsat.G13731.T20 vs. ExPASy TrEMBL
Match: A0A6J1GVJ0 (proteasome assembly chaperone 4 OS=Cucurbita moschata OX=3662 GN=LOC111457557 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 3.04e-48
Identity = 84/104 (80.77%), Postives = 94/104 (90.38%), Query Frame = 0 

Query: 1   MLHEGQISKEEQSFASPSNSNSNGN-LDG--VRVTCFSEAINDVPIHFQIICLSKQIYVW 60
           MLH+ QISKEEQ+ A PS+SN++ + LDG  ++VTCFSEAINDVPIHFQII L KQIY W
Sbjct: 1   MLHQAQISKEEQTLAIPSSSNNDDHHLDGGGIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60

Query: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101
           IGCNSAKFGNLYAAAPTRPNNTVSVTS+LGGSSDNTGS+MARRL
Sbjct: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTGSTMARRL 104

[Close]
BLAST of Cucsat.G13731.T20 vs. ExPASy TrEMBL
Match: A0A6J1IXU6 (proteasome assembly chaperone 4 OS=Cucurbita maxima OX=3661 GN=LOC111479503 PE=4 SV=1)

HSP 1 Score: 159 bits (401), Expect = 8.70e-48
Identity = 84/104 (80.77%), Postives = 94/104 (90.38%), Query Frame = 0 

Query: 1   MLHEGQISKEEQSFASPSNSNSNGN-LDG--VRVTCFSEAINDVPIHFQIICLSKQIYVW 60
           ML++ QISKEEQ+ ASPS+SN++ + LDG  ++VTCFSEAINDVPIHFQII L KQIY W
Sbjct: 1   MLYQAQISKEEQTLASPSSSNNDDHHLDGGGIQVTCFSEAINDVPIHFQIIRLPKQIYAW 60

Query: 61  IGCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTGSSMARRL 101
           IGCNSAKFGNLYAAAPTRPNN VSVTS+LGGSSDNTGSSMARRL
Sbjct: 61  IGCNSAKFGNLYAAAPTRPNNMVSVTSLLGGSSDNTGSSMARRL 104

The following BLAST results are available for this feature:
BLAST of Cucsat.G13731.T20 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G13731.T20 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147905.16.78e-6399.01proteasome assembly chaperone 4 [Cucumis sativus] >XP_011653669.1 proteasome ass... [more]
XP_008448802.15.43e-5892.23PREDICTED: proteasome assembly chaperone 4 [Cucumis melo][more]
KAA0045091.11.33e-5792.23proteasome assembly chaperone 4 [Cucumis melo var. makuwa] >TYJ96236.1 proteasom... [more]
XP_038881184.14.06e-5387.38proteasome assembly chaperone 4 [Benincasa hispida][more]
KAG7018546.12.19e-4880.77Proteasome assembly chaperone 4 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Cucsat.G13731.T20 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZU03.28e-6399.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G304800 PE=4 SV=1[more]
A0A1S3BJY72.63e-5892.23proteasome assembly chaperone 4 OS=Cucumis melo OX=3656 GN=LOC103490859 PE=4 SV=... [more]
A0A5D3BBH26.44e-5892.23Proteasome assembly chaperone 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A6J1GVJ03.04e-4880.77proteasome assembly chaperone 4 OS=Cucurbita moschata OX=3662 GN=LOC111457557 PE... [more]
A0A6J1IXU68.70e-4880.77proteasome assembly chaperone 4 OS=Cucurbita maxima OX=3661 GN=LOC111479503 PE=4... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032157Proteasome assembly chaperone 4PFAMPF16093PAC4coord: 43..101
e-value: 9.9E-16
score: 57.7
IPR032157Proteasome assembly chaperone 4PANTHERPTHR33559PROTEASOME ASSEMBLY CHAPERONE 4coord: 25..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..24

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G13731Cucsat.G13731gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13731.T20.E1Cucsat.G13731.T20.E1exon
Cucsat.G13731.T20.E2Cucsat.G13731.T20.E2exon
Cucsat.G13731.T20.E3Cucsat.G13731.T20.E3exon
Cucsat.G13731.T20.E4Cucsat.G13731.T20.E4exon
Cucsat.G13731.T20.E5Cucsat.G13731.T20.E5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G13731.T20.C3Cucsat.G13731.T20.C3CDS
Cucsat.G13731.T20.C2Cucsat.G13731.T20.C2CDS
Cucsat.G13731.T20.C1Cucsat.G13731.T20.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G13731.T20Cucsat.G13731.T20-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043248 proteasome assembly
cellular_component GO:0000502 proteasome complex