Cucsat.G13197.T3 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G13197.T3
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein ROOT PRIMORDIUM DEFECTIVE 1
Location	ctg1838: 2053335 .. 2059861 (+)
RNA-Seq Expression	Cucsat.G13197.T3
Synteny	Cucsat.G13197.T3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGAATAGTCTGACACATGCTTTCTTTCCTAGATTACTAAACTATGTTCTCCATCTTATTTTAAAATATATAAAAGGACAGATTGATAAAGTATTTAGTGAGAAATAAATGAACTTAAAGCATATGATATCAAATATTTGACTTTAATTTAACTTAACTCATAAAAAGGGGGAAAAAGAAATTCCAATTTTCGAATTTTGAGAAAAAAGAAAGGAAACGAACAAAAGGTAAACGAACAATGGACAGTCTTACTAGTCATCAGCTACATCGGCTTCTGTGAAAATTCTGCCTGATTCTCGCCGGCGACAGCTGAAATAAACAATCACCATTTTCCTCCGTTTTATTATCTTTAAAAACCTAGTGCTCAGCTCTGTTTTGCAAAACTTCCTCTCCTTCAGTTCTTTTAGCTTTCTCATCGTCCACGACGGCGATGGTTCCCTGTGGCCTCACTCTTTCTCTGAAACCTCCTACCCTCTGTACTCGTATCAGTTTTAATGGAGGACCCACTTCAGCTTTCGCCCTCCAAGCTCCAATTCTTGGAACCCTAGTTCAAATGAAGGGGACTCGTGTTTGTTCTTTTCGCCATAACCATCGATTGGAGTTTAACGATGTGGGTCGGCGTCAAAGGCAATGTGGGCCGCTGAGGTTTACGGATTTTCGGATTTCAGCATCCTCTGGTGATGGCTCTGGCGATGGGTTTGGGTCTGGAGCTGGCGATGGTGGATATGGAGGTTATGGTCATGAAAATTCTGGAGGCGGTGAAGGGGATAGTGGCAAAGGCGGGAATAACTGGTCCTTCTTGTCTTGGTAATGTATCTCAGTATAATCTATCTCTTTTTCGTTTGTTAATTTAAATATCCTAATCTTCGCATGTATTTAAGCCTTTAAATTAGTTAGCGAAGATGTTTCTAACACTTGCTCAACTGATATTTCGGATTGGCAATTGTAATTCACGTATGTTCCCTTAACAAATGGATAAACTTAAGAAGAGATAAACAAAGGTTGGATTGTGGGTGAGTGAGGAAATGTTAAGGATATTACAAGCTTGTTCGTAAGTTTATTTGAGTTTGGTTACAAATAGAGCAAACGGGAGAGATTGCCATTCAAAGGGTTGTATTCTTCATTTTCTCTCAATGAAATTTGTCTTTTATCAAAAGAAAATCTAGTTTAAGTTCCTTCTATCATCTATACTTTCCAATTCTACCCTAATAAATTAGATATTTATACTGTTCCAATCAGTGCATTAACGTCCTTCTTGGCGACAGGGTTTCAAAGTGCAGGAATCTGCATTTCTTTTCTTAATATAAATCACCTTATCTAGCCTTCAATCATCGATACATAACCCGGTGATGTTTGGTCTTTGGTGAGGTTTCTTGTTTCTATGTGGGCTTTGGTTTCATTTTTATTTTTTTGTAATTATTCCTTAGGTGACATTTTACGTAGTGCGATCTTTTGTGGGGTCAATTTTTTGTATGTCCTTTTATTCTTTTATTCTTATTCTTTTATTCTTATTCTTTCTCAGCTATAGCTGTTTTTTCTGTTGAAAAAAAATTCATACATACTTGCCGATACTAAATACTACCCTAATAGGTATTTCATACCAATCCCTATCAGGGCACAATTGTCACCAATTCCTAGTCATAGTCATAGATAGACTTCTGTGGATGAGTCGTGATTGGAATATATTATGGGAGACTGGTTTTGCATGAGCCATGAGGACAACCTCCAATCGTAATTGAATGCATTTGTTTGCACTCCATGGTAAATTCTTTGCCAAAGTTGGACAAAGCCAAAATTGAAATTATACTCATTTTTGGAATGACTTCAGAAAAGATGGTAGTTGAATGAAGTTTATCTACCTTCATCAATGACAAGGATGGGAAACTTAATTGGCATAGTCTTTCAATTTACTCCAAATAATTGCCTTCTGTTTTTTTCTTCAGTTGGGTTTGGGAATGGAATTTTTTTTGGCTGGTGAGGAATTCTCATTTGAGATACGGTTAGGGTTAGATATTGGAAAGATCTCTCAGTTACCATGAGATGGGCAAAAATGCACTCAGCTTCTTTTTTTTGTATGCGCTTTTTTTAAATGGAAACAAACTTTTCATTGATTTAATGAAAAGAGATTGTTGCTCAAATTACAAGGAGACATAGTGGTCATAGAATTCATTTGGAAGCTTGTGTGTGTGTCGTTGTGATTATATATTTATTACTATTTATCTAATTATTTTTCATTTTAAGTAGTACAAATAAACAAAAAACGAGAATATTTTCCCGCAAAAATCAAACTTCCAAATGGAGATTTCTGGACCTTGACCCAATTCCCCAAATCAAACAATGAAGTGGGTCAGAGATAAAATATTTCAGCATGATTAGAGGTGGAGATTGGATATCTTATCCCACCCCATCTTTCTCCAACACCATTGCATTGTCATGTGTTCACTGTGAAGGCAGATTGAAATGCTCAGAATAGTCCTTTCAGAGTTGATTGCCGGCCTCCCTAATTGCAGGATGAACAAAATAGTCATGCTTTACTCTAAGGATTATTGGATGGTTATGCTATACTCTAGATTTCATCCTTTCCTCTTGCATATGATTGGCATCATGGCCCATCAGATGATGGATGGATGATAAGTATGAGTCTGCTTCATAAGAGTGAGGTGATCAGACTTGGAAATTTTAGAATACTGCTTTCAGAACACATTTTCAAGACCATAATTTTCCTGTAAAAAAACCATATTTTATCACTAGTGCAATTATTCCAAGGACAAAACATATCCTGTTTGTTTACTTGTGCTGTGTTTTAACATTTGTCACTTGTAATTTTGAGTGTCCTAGTTGCTTTCTATTTGATTTTCAGCAGAATGTCAGTCTGTGAGGTAATGGTACCTAGTAAGTTGGAAATTGATTCAAAATCTCGTCTTTTCTGAGTTTCCTCTTAGCTTCTATTTACAAGATTTATTTGGAAACAAGTTTTCAACTCCTCATCTGGTTTTCTTTTTTTTTTTTATTGTCAATTTTGTTTGAAGGGGTAAAAACTTAATTTTTATTATTTCAGGTATTTGACTCTTCTTGCAAAATATCCTGCTTTGGTGAAATCTGTAACATCTGGGATACTAAATGCTCTGGGAGATTTAATTTGCCAGGTTTGCCTCCTAAAATATTTCTCTTGGAATCTGTGGACTTTCTAAGTAATTTTCAATGTTGGCTTTGTTGAAGATTTTGTTTAATTATTTTCGGAAGTGGTGATAGACTGATAGTCATGAGTTTTTGAGACTCATGTAGCTTGATAAAGACGTGTACTCTGAATTTCACAGCAAATTAATGACGGCACTTTCAAAAATTGTTCATAATGAATAAAATTCGAGATGGTGTTATTAGTTTAAAATTTGGATGTGGGAGTATTAGTTGGAATACCTGTAAAATTATTTTTGCAAACCCACATTACAAGACGTTGATTCAATTATATTAATGGTTGGTTTAATTACAAGTTAAGTTTTTGAACTTTTAGGTTGTGTCTAATAGGTCTCCGCCTTCAAAAAAATGTTTTGTAAAATAGGTTGTTTAATTTTCACTTTTGTGTCTAATAGGTAGTTGATCTTTAAAAGATGTATGGTTAATAGGTCTTCAATTTTGTGTAGAAACGCTTTATAGTCCAGCCAGATAAACAAAAACTAGAAAGTTCAAACTTCAAGGACTAAATTTGTTGTTTAACCTAAATTGTATTTTCTGCTAACTTACTCTAATAAAAAAAAAAAAAAGTTCTGTACACTGCCTTGTGCTTCAGCTGCTTAATAATTTGTTTCTATTGTAATAACTATTGAACTAAATGCTTAACATCTTCACCTAGATTGTTTTTGAAGAAGCACCATCAGCAGACCTGAGAAGAACGTTCAGATTTTCTCTTTTGGGGCTTGTGTTAGTCGGTCCCGCATTGCATTTTTGGTATTCCTTCAAGACCCTTCTTACTTCTCTTACTTCTCTTACAAATTCAGAGCTATTTGATACGTGATTAGGAATGAAGACTCATTTGAAGTTACCTGTTAAAATCCTGAAGATGTTACACTATCTTTTAAAAAAGTCAAATTGTTGGTTCAACTCTCTTAAGGGTTAAAGCCCATTTTTATGTAGGCCATTGAATCATTCATTCATGTAAATGTGAAATAAACCAATCTTGTGTTGCTTTGAATGGATAATGCTCATAGACATGCCATACATCAATCTGAAACTCAAGATGAACTGTAATTTGTAATCCTTTTTCGAACCATTTTCAGTTTCTTGAATCCTTCTAAAGTAATGTATGTAATCGTATAGGTACTTGTATCTTAGTCAGTTGGTGACCTTGCCAGGGGCCTCAGGTGCATTCGTCCGTCTACTTCTCGATCAGGTAATTCATTTCATTACAAGAGCGATTACATGTTCTTAAAAAGTAGTTTAACCTGAAGTACTGTATCTAAATGTAATGTTAACAATTGCAGTTCATTTTTACTCCGGTATTCATTGGAGTCTTTCTAAGTGGATTATTAACACTAGAAGGGCGGCCATCAGATATTATTCCTAAGCTTCAGCAGGTGCCATTCAAAACATTTTCTGCTCCAACAAGAGAACAACTTTTAATTTAATGGGCTTTTCAGCCTTATACTTCATAGTTCTCTTATCTTATTTATTTTTTTGATAACTTTTCTTTTTGCCTTTTAGGAGTGGTTTTCTTCTGTTGTTGCTAATTGGAAACTCTGGATACCTTTCCAGTTTCTCAATTTCAGATTTGTTCCGCAGCAATTCCAGGTATGCCTTATTCCAATTGTAGCTTCTCTACCATTTGATTGAGTTAATATTTCAAGTAGTAATATATGTTCTTGTTTATTAAAACCACTGCATAAATGCATAAATGCACTGATGCTATTTTCTCTATCTAAATCAGAATACACTGCCTTTGTTAATTTAATCATCATGAACCAAACTATAGTCAAAGTAGTAAAGTGTAAACAGACATATCATCAAGGTTTTAGATTCAAAATATGGTGGTCTCTTCCTGCTCCTTTTCGGTATAAGAGTCAGTTTCTTTTGCATGCTAGTTTTGCAATTTTTACGGAGTCTTTGGTTTGGTAGAAACAATAGGAATTGTAGGGGAATGAGAATTCAAGAGGAGGTCGTTTGGTCTTTCACTAGATTCCATGTCTCCCTTTGAGTTTTGTTGCATAAGGATTTTTACAATTATCCTCTAGTCTTATTTTACTATATTAGCTTCCAGTTATAGGTTGGCTCCTTTTCGTGGGCCCTCTTTCTCTCTCTTCTTTTGAAAAAGGTAAAAAAGTTCTTTAAGGATCCTGTGGATGCTAAGTGTTTTATGAGATCTCCAAGGATTCGTCCCTATGCTAGTCTAAGACTCCACTTAGTTCAATGGATTTATCTTTAGAGTGGATTTGGCCATGCTTATCATTTTTAACCATGACTTCCTGCTTCCTCCCTACAATGTTTTATTCAGTGTTTTATTGTACAAACAGTGTTAAAATCTCAGTAAAACGATAAAGGAAAAGGTGAAGTAGTAGAGAGATCAACTTGACATTCACTGGCTGGGATTTATAGATACACAGTAAAACTGGATTTCCCAAGATTTTGCATAAATGATCCCAACATTTTAAAATGGGAAACCCTGATGAGAACCATCATTAAATTTTATGTTAATGTACATGATAGTCTCTAGACATTCTGAAAATCAAAAGATAAATGGCGTAACTATTACATACAAATTCTGTATGACATAATTAGTATCGAATTATATGGTATGGTGTCTAAAGCTTCGTATATGCAAAATGACTTCAGGTCCTTGCAGCTAATATCCTTGCCTTGGCATGGAATGTCATCCTCTCCTTTAAAGCTCACAAAGAGATCATTACCCGATAGGTAAAAATCTTCACTTGTTATGGGATTGGATCTATGATTTTGTATTACACTCAACAAACATTTTGGTCAATCTTGAATTAATAATTGATCATTTCTTGCAGATTATGTTATCAGAGGTAGTTCAAATAACAATTTTGATGAAATATTAGTTCTTAGTCTCAGCCTCTAAAAATATTATTTAGTTTTGGAACAAAAATGTGACACAGGCGTGCGAGATCTAGATCGAATGTCAATTATTTTGTTTGGTGCCTTGTCTTGAAGTGCTACATAAAAACAAGGGTAAAATGGAACATTAAAGATACCGATTTATCTTCTTTGTTCAAACTTCTCACTTGAAGCTTTTTCTCATTTACAAATATGGAGGAGTCATTGAGATGAAACTAAAGACGAAGATGTACAAGGATAAGGATATGGATTTTGCGTTTTCATTTCTAGTATTTTCTTTTGATTTAATACTTCACTTTTATGATTTTGTGAACTCTGTAGGAAATGGGAGCCTTTAATGTTAGTCCACTTTATCTCAACTCATTTTTCATTCTCTTTCAATATTGTGTATGTGTGTTCATGTATATTATTTGTAGTATATGTTTCATCTTACTGAAGTTCTATTTCTTTTCCTG

Coding sequence (CDS)

ATGGTTCCCTGTGGCCTCACTCTTTCTCTGAAACCTCCTACCCTCTGTACTCGTATCAGTTTTAATGGAGGACCCACTTCAGCTTTCGCCCTCCAAGCTCCAATTCTTGGAACCCTAGTTCAAATGAAGGGGACTCGTGTTTGTTCTTTTCGCCATAACCATCGATTGGAGTTTAACGATGTGGGTCGGCGTCAAAGGCAATGTGGGCCGCTGAGGTTTACGGATTTTCGGATTTCAGCATCCTCTGGTGATGGCTCTGGCGATGGGTTTGGGTCTGGAGCTGGCGATGGTGGATATGGAGGTTATGGTCATGAAAATTCTGGAGGCGGTGAAGGGGATAGTGGCAAAGGCGGGAATAACTGGTCCTTCTTGTCTTGGTATTTGACTCTTCTTGCAAAATATCCTGCTTTGGTGAAATCTGTAACATCTGGGATACTAAATGCTCTGGGAGATTTAATTTGCCAGATTGTTTTTGAAGAAGCACCATCAGCAGACCTGAGAAGAACGTTCAGATTTTCTCTTTTGGGGCTTGTGTTAGTCGGTCCCGCATTGCATTTTTGGTACTTGTATCTTAGTCAGTTGGTGACCTTGCCAGGGGCCTCAGGTGCATTCGTCCGTCTACTTCTCGATCAGTTCATTTTTACTCCGGTATTCATTGGAGTCTTTCTAAGTGGATTATTAACACTAGAAGGGCGGCCATCAGATATTATTCCTAAGCTTCAGCAGGAGTGGTTTTCTTCTGTTGTTGCTAATTGGAAACTCTGGATACCTTTCCAGTTTCTCAATTTCAGATTTGTTCCGCAGCAATTCCAGGTCCTTGCAGCTAATATCCTTGCCTTGGCATGGAATGTCATCCTCTCCTTTAAAGCTCACAAAGAGATCATTACCCGATAG

Protein sequence

MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFNDVGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNNWSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLVGPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKLQQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR

Homology

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BLAST of Cucsat.G13197.T3 vs. ExPASy Swiss-Prot
Match: Q4IPX8 (Protein SYM1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=SYM1 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.5e-25
Identity = 65/171 (38.01%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 122 SFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEE--APSADLRRTFRFSLLGLVL 181
           SF+ WY + LA  P L +SVT+  L A GD+  Q + E+  A   DL RT R +L G  +
Sbjct: 3   SFIRWYNSRLAARPLLTQSVTTAFLFATGDVTAQQLVEKRGAQKHDLVRTGRMALYGGFV 62

Query: 182 VGPALHFWYLYLSQLVTLPGASGAFV--RLLLDQFIFTPVFIGVFLSGLLTLEGRPSDII 241
            GP    W+ +L++ V +     A V  R+  DQ  F PV IGVFLS + T+EG+   + 
Sbjct: 63  FGPVATTWFAFLARRVNVRNNKKAEVLARVACDQLGFAPVMIGVFLSSMATMEGK--SVK 122

Query: 242 PKLQQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSF 289
            ++ + W+ ++ ANW +W   Q +NF  +P Q+++  ANI+A+ WN  LS+
Sbjct: 123 ERIDKTWWPALKANWMVWPAVQVINFSLIPLQYRLFFANIIAIGWNSYLSW 171

[Close]

BLAST of Cucsat.G13197.T3 vs. ExPASy Swiss-Prot
Match: Q7SCY7 (Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=sym-1 PE=3 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 1.0e-24
Identity = 62/169 (36.69%), Postives = 98/169 (57.99%), Query Frame = 0


Query: 124 LSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEE--APSADLRRTFRFSLLGLVLVG 183
           LSWY   LA  P L ++VT+ IL  +GD+  Q + +     + DL RT R  L G  + G
Sbjct: 2   LSWYKAQLAARPLLTQAVTTSILFGVGDVAAQQLVDRRGLSNHDLTRTGRMVLYGGAVFG 61

Query: 184 PALHFWYLYLSQLVTLPGASGAFV--RLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPK 243
           PA   W+ +L + V +PG++   +  R+  DQ +F P FIG+FL  +  LEG  +D+  K
Sbjct: 62  PAATTWFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIFLGSMAVLEG--TDVKEK 121

Query: 244 LQQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSF 289
           LQ+ ++ ++  NW +W   Q +NF+ VP   +VL  N++++ WN  LS+
Sbjct: 122 LQKNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIGWNCYLSW 168

[Close]

BLAST of Cucsat.G13197.T3 vs. ExPASy Swiss-Prot
Match: Q2KIY1 (Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3)

HSP 1 Score: 114.4 bits (285), Expect = 2.2e-24
Identity = 59/171 (34.50%), Postives = 98/171 (57.31%), Query Frame = 0


Query: 124 LSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEE------APSADLRRTFRFSLLGL 183
           LS YL LL  YP L K+ TSGIL+ALG+ + Q++ ++      +   D+    R+++ G 
Sbjct: 22  LSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGPLRYAIYGF 81

Query: 184 VLVGPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGR-PSDI 243
              GP  HF+YL + + +          RLLLD+ +F P F+ +F   +  LEG+  +  
Sbjct: 82  FFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAPAFLSLFFLVMNFLEGQDTAAF 141

Query: 244 IPKLQQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILS 288
             K++  ++ ++  NW++W P QF+N  ++P QF+VL AN++AL W   L+
Sbjct: 142 AAKMKSGFWPALRMNWRVWTPVQFININYIPVQFRVLFANLVALFWYAYLA 192

[Close]

BLAST of Cucsat.G13197.T3 vs. ExPASy Swiss-Prot
Match: Q5TZ51 (Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23
Identity = 63/169 (37.28%), Postives = 97/169 (57.40%), Query Frame = 0


Query: 127 YLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSA--DLRRTFRFSLLGLVLVGPAL 186
           Y  L+AK+P  V+ +T+G L  +GD+I Q + E    A  + RRT +   +G   VGP +
Sbjct: 8   YQALMAKHPWKVQIITAGSLVGVGDVISQQLIERRGLANHNARRTAKMMSIGFFFVGPVV 67

Query: 187 HFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEG-RPSDIIPKLQQE 246
             WY  L +LVT    S A  ++L+DQ  F P F+G FL    TL G    + + KLQ++
Sbjct: 68  GGWYKVLDKLVTGGTKSAALKKMLVDQVGFAPCFLGAFLGITGTLNGLTVEENVAKLQRD 127

Query: 247 WFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHK 293
           +  ++++N+ LW P Q  NF F+P   ++    I+A+ WN  LS+KA+K
Sbjct: 128 YTDALISNYYLWPPVQIANFYFIPLHHRLAVVQIVAVVWNSYLSWKANK 176

[Close]

BLAST of Cucsat.G13197.T3 vs. ExPASy Swiss-Prot
Match: P42925 (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23
Identity = 61/169 (36.09%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 124 LSWYLTLLAKYPALVKSVTSGILNALGDLICQIV----FEEAPSADLRRTFRFSLLGLVL 183
           L+ YL LL  YP L K+V+SGIL+ALG+L+ Q +     +++   ++    R+ + GL +
Sbjct: 22  LAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFV 81

Query: 184 VGPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGR-PSDIIP 243
            GP  H+ YL++   V       +  RLLLD+  F P F+ +F   +  LEG+  S  + 
Sbjct: 82  TGPLSHYLYLFMEYSVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNVSVFVA 141

Query: 244 KLQQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILS 288
           K++  ++ ++  NW++W P QF+N  +VP QF+VL AN+ AL W   L+
Sbjct: 142 KMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYLA 190

[Close]

BLAST of Cucsat.G13197.T3 vs. NCBI nr
Match: XP_011652163.1 (protein sym-1 [Cucumis sativus] >KGN59408.1 hypothetical protein Csa_001167 [Cucumis sativus])

HSP 1 Score: 590 bits (1520), Expect = 2.24e-212
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60
           MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND
Sbjct: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60

Query: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120
           VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN
Sbjct: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120

Query: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180
           WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV
Sbjct: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297
           QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297

[Close]

BLAST of Cucsat.G13197.T3 vs. NCBI nr
Match: XP_008443214.1 (PREDICTED: protein SYM1 [Cucumis melo] >XP_008443215.1 PREDICTED: protein SYM1 [Cucumis melo] >KAA0053913.1 protein SYM1 [Cucumis melo var. makuwa] >TYK25492.1 protein SYM1 [Cucumis melo var. makuwa])

HSP 1 Score: 560 bits (1442), Expect = 1.74e-200
Identity = 283/297 (95.29%), Postives = 287/297 (96.63%), Query Frame = 0


Query: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60
           MVPCGLTLSLKPP LCTRISFNGG  SAF LQAPIL T VQMKGTRVCSFRHNHRLEFND
Sbjct: 1   MVPCGLTLSLKPPILCTRISFNGGHISAFGLQAPILETPVQMKGTRVCSFRHNHRLEFND 60

Query: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120
           VGRRQ QCG LRFTDFRISASSGDGSGDGFGSGAGDGG+GGYGHENSGGGEGDSGK GNN
Sbjct: 61  VGRRQMQCGSLRFTDFRISASSGDGSGDGFGSGAGDGGHGGYGHENSGGGEGDSGKSGNN 120

Query: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180
           WSFLSWYLTLLAKYPALVKS+TSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV
Sbjct: 121 WSFLSWYLTLLAKYPALVKSITSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVF+GVFLSGL+TLEGRPS IIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFLGVFLSGLVTLEGRPSHIIPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297
           QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297

[Close]

BLAST of Cucsat.G13197.T3 vs. NCBI nr
Match: XP_038903823.1 (protein sym-1 [Benincasa hispida])

HSP 1 Score: 545 bits (1404), Expect = 1.16e-194
Identity = 274/297 (92.26%), Postives = 282/297 (94.95%), Query Frame = 0


Query: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60
           MVPCGLTLSLKPPTLCTR  FNGGP S F LQAPILGT VQMKGT VCSFRHNHRLEFND
Sbjct: 3   MVPCGLTLSLKPPTLCTRFRFNGGPISGFGLQAPILGTPVQMKGTCVCSFRHNHRLEFND 62

Query: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120
           VGRRQ Q G LRFT+FRISASSGDGSGDGFGSG GDGGYGGYGHENSGGGEGDS KGG+N
Sbjct: 63  VGRRQMQRGSLRFTNFRISASSGDGSGDGFGSGGGDGGYGGYGHENSGGGEGDSDKGGDN 122

Query: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180
           WS LSWYLTLLAKYPALVKSVTSGILNALGDLICQ+VFEEAPSADLRRTFRFSLLGL LV
Sbjct: 123 WSLLSWYLTLLAKYPALVKSVTSGILNALGDLICQLVFEEAPSADLRRTFRFSLLGLALV 182

Query: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAF+RLLLDQFIFTPVF+GVFL+GL+TLEGRPS IIPKL
Sbjct: 183 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFIFTPVFLGVFLAGLVTLEGRPSHIIPKL 242

Query: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297
           QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAAN+LALAWNVILSFKAHKEIITR
Sbjct: 243 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANVLALAWNVILSFKAHKEIITR 299

[Close]

BLAST of Cucsat.G13197.T3 vs. NCBI nr
Match: XP_022934093.1 (protein sym-1-like [Cucurbita moschata] >KAG6580864.1 hypothetical protein SDJN03_20866, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 499 bits (1286), Expect = 1.03e-176
Identity = 253/297 (85.19%), Postives = 268/297 (90.24%), Query Frame = 0


Query: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60
           MVPCG++ SLKP TLCTR SFNG PT  F LQAPIL T V+MK    CS RHNH LEF D
Sbjct: 1   MVPCGVSPSLKPTTLCTRFSFNGRPTFGFGLQAPILDTPVRMKRICDCSSRHNHILEFKD 60

Query: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120
           VGRRQ QCG   FTDFRISASSGDGSGDGFGSG GDGG+GG G ENSGGGEGDSGKGG N
Sbjct: 61  VGRRQLQCGSRMFTDFRISASSGDGSGDGFGSGGGDGGFGGSGGENSGGGEGDSGKGGVN 120

Query: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180
           W FLSWYLT+LAKYP LVKSVTSGILNALGDLICQ+VFEEAP+ADLRRTFRFSLLGL LV
Sbjct: 121 WPFLSWYLTVLAKYPVLVKSVTSGILNALGDLICQLVFEEAPTADLRRTFRFSLLGLALV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAF+ LLLDQFIFTPVF+GVFL+GL+TLEGRPS I+PKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLSLLLDQFIFTPVFLGVFLAGLVTLEGRPSCIVPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297
           QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAAN++ALAWNVILSFKAH+EIITR
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANVIALAWNVILSFKAHREIITR 297

[Close]

BLAST of Cucsat.G13197.T3 vs. NCBI nr
Match: XP_022983841.1 (protein sym-1 [Cucurbita maxima])

HSP 1 Score: 491 bits (1263), Expect = 3.27e-173
Identity = 248/297 (83.50%), Postives = 265/297 (89.23%), Query Frame = 0


Query: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60
           MVPCG++ SLKPPTLCT  SFNG PT  F LQAP L T ++MK    CS RH H L+F D
Sbjct: 1   MVPCGVSPSLKPPTLCTLFSFNGRPTFGFGLQAPNLETPLRMKTACACSSRHTHILKFKD 60

Query: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120
           VGRRQ QCG   FTDFRISASSGDGSGDGFGSG GDGG+GG G ENSGGGEGDSGKGG N
Sbjct: 61  VGRRQMQCGSRMFTDFRISASSGDGSGDGFGSGGGDGGFGGSGGENSGGGEGDSGKGGVN 120

Query: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180
           W FLSWYLT+LAKYP LVKSVTSGILNALGDLICQ+VFEEA SADLRRTFRFSLLGL LV
Sbjct: 121 WPFLSWYLTVLAKYPVLVKSVTSGILNALGDLICQLVFEEASSADLRRTFRFSLLGLALV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAF+ LLLDQFIFTP+F+GVFL+GL+TLEGRPS I+PKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLSLLLDQFIFTPMFLGVFLAGLVTLEGRPSCIVPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297
           QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAAN++ALAWNVILSFKAH+EIITR
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANVIALAWNVILSFKAHREIITR 297

[Close]

BLAST of Cucsat.G13197.T3 vs. ExPASy TrEMBL
Match: A0A0A0LC77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G816700 PE=3 SV=1)

HSP 1 Score: 590 bits (1520), Expect = 1.08e-212
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60
           MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND
Sbjct: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60

Query: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120
           VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN
Sbjct: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120

Query: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180
           WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV
Sbjct: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297
           QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297

[Close]

BLAST of Cucsat.G13197.T3 vs. ExPASy TrEMBL
Match: A0A1S3B718 (protein SYM1 OS=Cucumis melo OX=3656 GN=LOC103486861 PE=3 SV=1)

HSP 1 Score: 560 bits (1442), Expect = 8.42e-201
Identity = 283/297 (95.29%), Postives = 287/297 (96.63%), Query Frame = 0


Query: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60
           MVPCGLTLSLKPP LCTRISFNGG  SAF LQAPIL T VQMKGTRVCSFRHNHRLEFND
Sbjct: 1   MVPCGLTLSLKPPILCTRISFNGGHISAFGLQAPILETPVQMKGTRVCSFRHNHRLEFND 60

Query: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120
           VGRRQ QCG LRFTDFRISASSGDGSGDGFGSGAGDGG+GGYGHENSGGGEGDSGK GNN
Sbjct: 61  VGRRQMQCGSLRFTDFRISASSGDGSGDGFGSGAGDGGHGGYGHENSGGGEGDSGKSGNN 120

Query: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180
           WSFLSWYLTLLAKYPALVKS+TSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV
Sbjct: 121 WSFLSWYLTLLAKYPALVKSITSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVF+GVFLSGL+TLEGRPS IIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFLGVFLSGLVTLEGRPSHIIPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297
           QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297

[Close]

BLAST of Cucsat.G13197.T3 vs. ExPASy TrEMBL
Match: A0A5D3DPM1 (Protein SYM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006390 PE=3 SV=1)

HSP 1 Score: 560 bits (1442), Expect = 8.42e-201
Identity = 283/297 (95.29%), Postives = 287/297 (96.63%), Query Frame = 0


Query: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60
           MVPCGLTLSLKPP LCTRISFNGG  SAF LQAPIL T VQMKGTRVCSFRHNHRLEFND
Sbjct: 1   MVPCGLTLSLKPPILCTRISFNGGHISAFGLQAPILETPVQMKGTRVCSFRHNHRLEFND 60

Query: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120
           VGRRQ QCG LRFTDFRISASSGDGSGDGFGSGAGDGG+GGYGHENSGGGEGDSGK GNN
Sbjct: 61  VGRRQMQCGSLRFTDFRISASSGDGSGDGFGSGAGDGGHGGYGHENSGGGEGDSGKSGNN 120

Query: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180
           WSFLSWYLTLLAKYPALVKS+TSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV
Sbjct: 121 WSFLSWYLTLLAKYPALVKSITSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVF+GVFLSGL+TLEGRPS IIPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFLGVFLSGLVTLEGRPSHIIPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297
           QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297

[Close]

BLAST of Cucsat.G13197.T3 vs. ExPASy TrEMBL
Match: A0A6J1F6P4 (protein sym-1-like OS=Cucurbita moschata OX=3662 GN=LOC111441368 PE=3 SV=1)

HSP 1 Score: 499 bits (1286), Expect = 4.97e-177
Identity = 253/297 (85.19%), Postives = 268/297 (90.24%), Query Frame = 0


Query: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60
           MVPCG++ SLKP TLCTR SFNG PT  F LQAPIL T V+MK    CS RHNH LEF D
Sbjct: 1   MVPCGVSPSLKPTTLCTRFSFNGRPTFGFGLQAPILDTPVRMKRICDCSSRHNHILEFKD 60

Query: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120
           VGRRQ QCG   FTDFRISASSGDGSGDGFGSG GDGG+GG G ENSGGGEGDSGKGG N
Sbjct: 61  VGRRQLQCGSRMFTDFRISASSGDGSGDGFGSGGGDGGFGGSGGENSGGGEGDSGKGGVN 120

Query: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180
           W FLSWYLT+LAKYP LVKSVTSGILNALGDLICQ+VFEEAP+ADLRRTFRFSLLGL LV
Sbjct: 121 WPFLSWYLTVLAKYPVLVKSVTSGILNALGDLICQLVFEEAPTADLRRTFRFSLLGLALV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAF+ LLLDQFIFTPVF+GVFL+GL+TLEGRPS I+PKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLSLLLDQFIFTPVFLGVFLAGLVTLEGRPSCIVPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297
           QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAAN++ALAWNVILSFKAH+EIITR
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANVIALAWNVILSFKAHREIITR 297

[Close]

BLAST of Cucsat.G13197.T3 vs. ExPASy TrEMBL
Match: A0A6J1J3I0 (protein sym-1 OS=Cucurbita maxima OX=3661 GN=LOC111482336 PE=3 SV=1)

HSP 1 Score: 491 bits (1263), Expect = 1.58e-173
Identity = 248/297 (83.50%), Postives = 265/297 (89.23%), Query Frame = 0


Query: 1   MVPCGLTLSLKPPTLCTRISFNGGPTSAFALQAPILGTLVQMKGTRVCSFRHNHRLEFND 60
           MVPCG++ SLKPPTLCT  SFNG PT  F LQAP L T ++MK    CS RH H L+F D
Sbjct: 1   MVPCGVSPSLKPPTLCTLFSFNGRPTFGFGLQAPNLETPLRMKTACACSSRHTHILKFKD 60

Query: 61  VGRRQRQCGPLRFTDFRISASSGDGSGDGFGSGAGDGGYGGYGHENSGGGEGDSGKGGNN 120
           VGRRQ QCG   FTDFRISASSGDGSGDGFGSG GDGG+GG G ENSGGGEGDSGKGG N
Sbjct: 61  VGRRQMQCGSRMFTDFRISASSGDGSGDGFGSGGGDGGFGGSGGENSGGGEGDSGKGGVN 120

Query: 121 WSFLSWYLTLLAKYPALVKSVTSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180
           W FLSWYLT+LAKYP LVKSVTSGILNALGDLICQ+VFEEA SADLRRTFRFSLLGL LV
Sbjct: 121 WPFLSWYLTVLAKYPVLVKSVTSGILNALGDLICQLVFEEASSADLRRTFRFSLLGLALV 180

Query: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFIGVFLSGLLTLEGRPSDIIPKL 240
           GPALHFWYLYLSQLVTLPGASGAF+ LLLDQFIFTP+F+GVFL+GL+TLEGRPS I+PKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLSLLLDQFIFTPMFLGVFLAGLVTLEGRPSCIVPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANILALAWNVILSFKAHKEIITR 297
           QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAAN++ALAWNVILSFKAH+EIITR
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQVLAANVIALAWNVILSFKAHREIITR 297

The following BLAST results are available for this feature:

BLAST of Cucsat.G13197.T3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4IPX8	4.5e-25	38.01	Protein SYM1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 /...	[more]
Q7SCY7	1.0e-24	36.69	Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 ...	[more]
Q2KIY1	2.2e-24	34.50	Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3	[more]
Q5TZ51	1.1e-23	37.28	Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1	[more]
P42925	1.1e-23	36.09	Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2	[more]

BLAST of Cucsat.G13197.T3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652163.1	2.24e-212	100.00	protein sym-1 [Cucumis sativus] >KGN59408.1 hypothetical protein Csa_001167 [Cuc...	[more]
XP_008443214.1	1.74e-200	95.29	PREDICTED: protein SYM1 [Cucumis melo] >XP_008443215.1 PREDICTED: protein SYM1 [...	[more]
XP_038903823.1	1.16e-194	92.26	protein sym-1 [Benincasa hispida]	[more]
XP_022934093.1	1.03e-176	85.19	protein sym-1-like [Cucurbita moschata] >KAG6580864.1 hypothetical protein SDJN0...	[more]
XP_022983841.1	3.27e-173	83.50	protein sym-1 [Cucurbita maxima]	[more]

BLAST of Cucsat.G13197.T3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC77	1.08e-212	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G816700 PE=3 SV=1	[more]
A0A1S3B718	8.42e-201	95.29	protein SYM1 OS=Cucumis melo OX=3656 GN=LOC103486861 PE=3 SV=1	[more]
A0A5D3DPM1	8.42e-201	95.29	Protein SYM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006390 ...	[more]
A0A6J1F6P4	4.97e-177	85.19	protein sym-1-like OS=Cucurbita moschata OX=3662 GN=LOC111441368 PE=3 SV=1	[more]
A0A6J1J3I0	1.58e-173	83.50	protein sym-1 OS=Cucurbita maxima OX=3661 GN=LOC111482336 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 229..287 e-value: 5.7E-21 score: 74.5
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 116..292
None	No IPR available	PANTHER	PTHR11266:SF80	PEROXISOMAL MEMBRANE PROTEIN 2	coord: 116..292

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G13197	Cucsat.G13197	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13197.T3.E1	Cucsat.G13197.T3.E1	exon
Cucsat.G13197.T3.E2	Cucsat.G13197.T3.E2	exon
Cucsat.G13197.T3.E3	Cucsat.G13197.T3.E3	exon
Cucsat.G13197.T3.E4	Cucsat.G13197.T3.E4	exon
Cucsat.G13197.T3.E5	Cucsat.G13197.T3.E5	exon
Cucsat.G13197.T3.E6	Cucsat.G13197.T3.E6	exon
Cucsat.G13197.T3.E7	Cucsat.G13197.T3.E7	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13197.T3.C1	Cucsat.G13197.T3.C1	CDS
Cucsat.G13197.T3.C2	Cucsat.G13197.T3.C2	CDS
Cucsat.G13197.T3.C3	Cucsat.G13197.T3.C3	CDS
Cucsat.G13197.T3.C4	Cucsat.G13197.T3.C4	CDS
Cucsat.G13197.T3.C5	Cucsat.G13197.T3.C5	CDS
Cucsat.G13197.T3.C6	Cucsat.G13197.T3.C6	CDS
Cucsat.G13197.T3.C7	Cucsat.G13197.T3.C7	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G13197.T3	Cucsat.G13197.T3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding