Cucsat.G1315.T30 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAACAGATTAAGGTATTATAACCTGAAGAGTTGTAGATTTTCTTTTTACAAATATTTTGGAATGTATTTCCATGCTTCTTGTAATGTTATGTTACTGATGAGTGATGACTTCAATTAGGTTGGACAAGACAAAGTTTCATATAATTGGGGCAATACTCTTTACGGTTCAGTCAGCCTTGTTACATCCAACAGCGGTTGTAAAAACTAGAATGCAAGTTGATGGATCTGGTCTTTCTCACATGCGTGGAGTCTCAGTTTTCTGGAATATATTGAAGTCCGATGGAATCTCTGGCTTGTACAGAGGATTTGGTACTTCAGCAATTGGATCATTACCTGGTCGAGTATTGGCTTTAACATCACTAGAAGTATCAAAAGACATAATGTTGAAATATACTGAAAATCTGGAAATGCCTGAAGCAACGCGTATTGGTCTTGCTAATGGAGTTGCAGGCATGATCTCAAATTTAGTTTCATGCATATACTATGTGCCATTGGACGTGGTAGGTGAACCTTTCCTTTTGAGTGTTGCCTATTTGAGATTTTTTTCCTTTTTTTTGGGTGAAGTAGTTTAGTTCTTGATGAGGGAACACTTAAAGACTTGATTGAAATAAATGGCTCATGGTTGCAAGTTCCCATGCTTAAGCAAACCTGTCAGCAATAATTGGCATGTACAGTGTACTTCATCCCTTGAGGTTGGGGGTTCAAGTCTCCATACCCTCCATTTTTTTGTACTAAAATAATTTCAAATTTAGTTTTTAGGATGAAGTTTTTTTTGTTTGTTCACTTGATTTGAAGAGAAAAAAATATTTATGGATAAAAACTTATTTTTCTCTGAATTGAATGAAGGATATATCGGTGAACTTGATCCTCTCTCCTACTTCACAGTTTACTTTTGCAAGTACATACATTAAATAAGAAGCTTCAATTTTGATCTGTATGTATGACTACTACTTGTGATACAATTATACAATGTCAATTGTTGTCCTCAGGTTTGCCAGAGGCTGATGGTTCAAGGGCTTCCTGGAACCACCTACTGCAATAGCCCACTTGATGTTGTCAGAAAAGTGATGAAGGCCGAAGGATTTCGTGGTTTATATAGGGGTTTTGGATTAACGGCTGTAACTCAGTCTCCAGCATCTGCCCTCTGGTGGGGTGTTTATGGTGCTGCTCAACATATTATCTGGAGGTGCAATAATTTTCTACCATTGTCAAATTTGCGGATTAATTTTAATGGCTAAAATCTTGGACTATGGAGTAATCTAATAATTATTAGGAGCTTAGGATATCGAGATAGCATGGAGAAGAAACCTTCTCACATGGAGATGGTTACAGTTCAGGCCACAGCAGGAATGGTGGCAGGTGCTTGTTCCTCTGTTATTACAACTCCCATTGACACAGTAAAAACCAGACTTCAGGTAACGTGGTAGTTAATATTAATCCGCTACAGTAGGAGAGGAAATTGGGTTTCTGAAATTGGATGTGCATCTACATGTGTGTGTGTACATCATTGGTATGAAATGATGAAAAGACTTCGTCTTTCGTTTCTTTAATGTTTTTTATCCGGATCTCTCCAATGCAGGTCATCGATAACTATGGAATTGGAAGACCATCCGTGCTCAAGACATCAAGAGCACTTCTCAAGGAAGATGGATGGCTGGGATTTTACAGAGGCTTTGGACCTCGGTTTTTGAATATGTCACTGTATGGAACCACGATGATAGTCACGTATGAACTGATCAGTAAGTCCGGATTTCTCGTTTCTCTCATTTGAAAGATTATGAAATTGACGTAGGAAATTAAGGTTTAAGAAACATAAAAAACACCACTGACTTTGAAAAGTTCCATTTTAACAAATTGAAAAACTATAAAGAAACATATGCATATGTAAAGTATAACTATACTATTGTCTTCTTCTTTTCATTCATGATCTATTTTCCGTTCTTCGGAACTTAAATATTTACAAACTTTTTTCCTTTTTAAGGGTTGTATTTCAAACTTAAAAGAGTCAAAATGAAACTTTTTAAAGTTTAGGTGGGTATTTTTTTTAAATTTAATCCATTATTAATCATGCTTCTCATGCAAATTTATAATATATTTTTATCTATAATCGTCACCGTTTATCAGTTATTCTAAAACATCTCACCCTTAGATTTATAATTTATCCTGGTGCATTTCTGTTTAACCCTCTAATATGCCTTTCATCAGAGCGACTTTCCCTAAAGGACATTGTGACATCTTGAACGGAAGGACATGCAGCACCTTTAGAATGAGTAGAACAGTAAGCCAGCAGCTTTTTTTGTTTTGTTATTTTTTCCCCCCTCTTTTTTAGAGGTTGGGGTTTGTCGCAGCAGATGAAACATAGAAGCATCTCATTGACACGGGATGGAACTAAACTAGCAGTTGTAGAAACGTAGATCATTCCATCCTTCCTCTATGTAAACTGAAGCAGAGGTGTCCCTTTTCACAATTTCAAAATCGCCTATATCGATTACATTTTGGTTAGAATTGTATTCATGTACTAATGAAACGAATGAATAATATTTCATTGATTCGTAGGAATGTTGCATGCTTGAATCATTGTTTTTCCCTTTTTCCCTCCGCTTGGGGGGTTAGTAAACATCTTAATCTAGCAGCACATGAAACATAGAAGCGTCATTGAGACAGGGCAGAACTTGAGTAGCATTAGTTTAAACGTACATAGATCATTCATTCTTCTTTCTCTAAACTGAATCTTAGAGGTGTCGTTCTTCACAAAATTAAAATCACTGGTATCATGTGTCTGTTCCATTTTGGCTACAATTGTATACATGAACAAATAGGAAAATGAATCATATTTGATTGATTTGTATGACTTCTTGCGCTCTTGAACCCTCCTACCAAAAAAGGGGTTAATTTGGTGACTAATTAGACTTCAGCAATGCAAAACTCAAGCTTCTCCCACCTATAGCCACCTAATAAATGCAGGGTTGGAATTCCTTCGGAGTTGCTGCTGATGATTATAGGTATGAATACTTTATCTTTATTTTGTTGGTTAACATATTACCTCTGATCTCACTATACTAATGTTACCAAGCTTTGGAGTGGATGTAAGGGCCTACAGTGCTGTAATGATCAGATTAATGATTGATCAGAAGTGTTCGGGAATGAAATGAATGATATCATGGGAAGGAACTGGATTTTTCTATTTCTATATTCTCCTACGTCGATCGGATCAACCAAGCGAGGCTAAAAATCGTCCACATGTCATTTTGCGCTTAAGTGGAATTACTTGACACACTTGTTCTTGGGATGGCTGGAAAAAAGTATAAAATAAGGAAAACTGAGACAAATAGGTATCATGTCTTCAACAAAATGCATGCAACATCCATCAATTGACACGACAACTGCCACGTTCGCTACATGCAGAAAGTCAAGAAAATGCCAGAAAACTGCATATATACATGAAAAAAACAAAGAAAAACACACATCAAAACACCAGACTTTGAATTTGTAATATTCTATAATTCTCTTCCTGTAGGTAGAAGATGCCTGGCCTTACAATAGGCGATACAATACCTAATATTCAAGCTGATAGCACCCATGGAAGGATCAGTTTATATGATTACTTCGGCGATAGCTGGGGCATTATCTTCTCTCACCCGGGTACACTTTCAAGATCACTCAGTCCTTTTGAGTTTTCCTTTTTTTCAAACTAAGCCTATTTCCTTTCATGCCATAGAGTTGAATTGTATTATTTAGTGAACGGGTTTCCGAAATTTGGCTTTTAAGGACAATGATTAGGTAAAAAAGAAATGAAAACAGCTAAAAGCAGCACCTAAGTTTTTTCAATCAAGAAATGTAAGTGGTAGGGATGATGGCTACTCAAATTTTGGTTTGCATGCAGGGGATTTTACTCCCGTTTGTACTACGGAGCTAGGGATGATGGCTGCGAAAGCAGAGGAGTTCAGTAAACGTGGTGTGAAGCTAGTAGGATTATCTTGTGATGATGTTCAATCACATAACGAGTGGATCAAAGATATCGAAGCCTTCAATGTGAGTTTTTCGGTTACTCAATGAATGCTTTTGGTTTTGAATAGTTAATTCAGTTGAATAACATACCTTTGCAGAAAGGGAAAAAAGTCACATATCCAATACTGGCGGATCCGAAGAGAGAGATCTTCAAGGAACTGAATATGGTCGACCCCGACGAGAAAGACCCATCAGGTGGTGCAGTGCCATCGCGGGCATTGCACATCATCGGTCCAGACAAGAAGGTGAAGCTAAGCTTCTTGTACCCAGCAAGTACTGGGAGGAACATAGAGGAAGTGTTGAGGGTTTTGGATTCTTTACAGAGGGCTACAAAACACAAGGTGGCGACTCCAGTGAACTGGAAGCCGGGCGACAAGTGTGTGATCACACCGAGTGTGAGTGATGAGCAGGCCAAGCAAATGTTCCCTAATGGCTACGAAACTTTGGAGCTTCCATCAAAGAAGAATTACTTGCGTTTCACTAATGTGTGAAAGCCACCACCACGGTATGAGGTTTTGTGTGGTGTTGAATGAAATGATAATAGTGGTAAACTATATTTTGTTGTCTCCTTGTTTATAAATGATGAAGCAATAGCTATATTATATGTATATGGTTTGCAACTACTTAGTTATGTACTATCCACTACTACCAAATGCTTATTATATTTTTACTTATGTTTGATGCATAGTAGTAATAATAATAATATTAATAATAATGTGAGTTTTTAACTTGAAGTTTTTA ATGACTTCAATTAGGTTGGACAAGACAAAGTTTCATATAATTGGGGCAATACTCTTTACGGTTCAGTCAGCCTTGTTACATCCAACAGCGGTTGTAAAAACTAGAATGCAAGTTGATGGATCTGGTCTTTCTCACATGCGTGGAGTCTCAGTTTTCTGGAATATATTGAAGTCCGATGGAATCTCTGGCTTGTACAGAGGATTTGGTACTTCAGCAATTGGATCATTACCTGGTCGAGTATTGGCTTTAACATCACTAGAAGTATCAAAAGACATAATGTTGAAATATACTGAAAATCTGGAAATGCCTGAAGCAACGCGTATTGGTCTTGCTAATGGAGTTGCAGGCATGATCTCAAATTTAGTTTCATGCATATACTATGTGCCATTGGACGTGGTTTGCCAGAGGCTGATGGTTCAAGGGCTTCCTGGAACCACCTACTGCAATAGCCCACTTGATGTTGTCAGAAAAGTGATGAAGGCCGAAGGATTTCGTGGTTTATATAGGGGTTTTGGATTAACGGCTGTAACTCAGTCTCCAGCATCTGCCCTCTGGTGGGGTGTTTATGGTGCTGCTCAACATATTATCTGGAGGTGCAATAATTTTCTACCATTGTCAAATTTGCGGATTAATTTTAATGGCTAA MTSIRLDKTKFHIIGAILFTVQSALLHPTAVVKTRMQVDGSGLSHMRGVSVFWNILKSDGISGLYRGFGTSAIGSLPGRVLALTSLEVSKDIMLKYTENLEMPEATRIGLANGVAGMISNLVSCIYYVPLDVVCQRLMVQGLPGTTYCNSPLDVVRKVMKAEGFRGLYRGFGLTAVTQSPASALWWGVYGAAQHIIWRCNNFLPLSNLRINFNG Homology
BLAST of Cucsat.G1315.T30 vs. ExPASy Swiss-Prot
Match: Q5RD67 (Solute carrier family 25 member 44 OS=Pongo abelii OX=9601 GN=SLC25A44 PE=2 SV=2) HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19 Identity = 60/199 (30.15%), Postives = 103/199 (51.76%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. ExPASy Swiss-Prot
Match: Q96H78 (Solute carrier family 25 member 44 OS=Homo sapiens OX=9606 GN=SLC25A44 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.6e-19 Identity = 60/199 (30.15%), Postives = 103/199 (51.76%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. ExPASy Swiss-Prot
Match: Q8BGF9 (Solute carrier family 25 member 44 OS=Mus musculus OX=10090 GN=Slc25a44 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 5.9e-19 Identity = 57/199 (28.64%), Postives = 101/199 (50.75%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. ExPASy Swiss-Prot
Match: Q54VX4 (Mitochondrial substrate carrier family protein J OS=Dictyostelium discoideum OX=44689 GN=mcfJ PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17 Identity = 56/190 (29.47%), Postives = 88/190 (46.32%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. ExPASy Swiss-Prot
Match: Q55E45 (Mitochondrial substrate carrier family protein E OS=Dictyostelium discoideum OX=44689 GN=mcfE PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.8e-15 Identity = 53/184 (28.80%), Postives = 94/184 (51.09%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. NCBI nr
Match: XP_004147664.2 (solute carrier family 25 member 44 [Cucumis sativus] >KGN57196.1 hypothetical protein Csa_010518 [Cucumis sativus]) HSP 1 Score: 388 bits (997), Expect = 1.12e-133 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. NCBI nr
Match: XP_008438985.1 (PREDICTED: solute carrier family 25 member 44-like [Cucumis melo] >XP_016899109.1 PREDICTED: solute carrier family 25 member 44-like [Cucumis melo] >XP_016899110.1 PREDICTED: solute carrier family 25 member 44-like [Cucumis melo]) HSP 1 Score: 384 bits (985), Expect = 7.49e-132 Identity = 190/194 (97.94%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. NCBI nr
Match: KAA0052165.1 (solute carrier family 25 member 44-like [Cucumis melo var. makuwa] >TYK05130.1 solute carrier family 25 member 44-like [Cucumis melo var. makuwa]) HSP 1 Score: 384 bits (985), Expect = 7.45e-129 Identity = 190/194 (97.94%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. NCBI nr
Match: XP_038877308.1 (solute carrier family 25 member 44-like [Benincasa hispida] >XP_038877316.1 solute carrier family 25 member 44-like [Benincasa hispida] >XP_038877323.1 solute carrier family 25 member 44-like [Benincasa hispida]) HSP 1 Score: 370 bits (951), Expect = 1.00e-126 Identity = 183/194 (94.33%), Postives = 188/194 (96.91%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. NCBI nr
Match: KAG6582151.1 (Solute carrier family 25 member 44, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 368 bits (945), Expect = 9.09e-126 Identity = 181/198 (91.41%), Postives = 190/198 (95.96%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. ExPASy TrEMBL
Match: A0A0A0LAT9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171040 PE=3 SV=1) HSP 1 Score: 388 bits (997), Expect = 5.42e-134 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. ExPASy TrEMBL
Match: A0A1S3AXR4 (solute carrier family 25 member 44-like OS=Cucumis melo OX=3656 GN=LOC103483917 PE=3 SV=1) HSP 1 Score: 384 bits (985), Expect = 3.63e-132 Identity = 190/194 (97.94%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. ExPASy TrEMBL
Match: A0A5A7UEN6 (Thioredoxin-dependent peroxiredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00340 PE=3 SV=1) HSP 1 Score: 384 bits (985), Expect = 3.61e-129 Identity = 190/194 (97.94%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. ExPASy TrEMBL
Match: A0A6J1GXG3 (solute carrier family 25 member 44-like OS=Cucurbita moschata OX=3662 GN=LOC111458040 PE=3 SV=1) HSP 1 Score: 367 bits (943), Expect = 8.87e-126 Identity = 180/194 (92.78%), Postives = 189/194 (97.42%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. ExPASy TrEMBL
Match: A0A6J1IPW0 (solute carrier family 25 member 44-like OS=Cucurbita maxima OX=3661 GN=LOC111479430 PE=3 SV=1) HSP 1 Score: 366 bits (939), Expect = 3.60e-125 Identity = 179/194 (92.27%), Postives = 189/194 (97.42%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. TAIR 10
Match: AT5G15640.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 192.6 bits (488), Expect = 3.3e-49 Identity = 94/194 (48.45%), Postives = 130/194 (67.01%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. TAIR 10
Match: AT1G72820.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 158.7 bits (400), Expect = 5.3e-39 Identity = 80/199 (40.20%), Postives = 128/199 (64.32%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. TAIR 10
Match: AT5G26200.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 148.3 bits (373), Expect = 7.1e-36 Identity = 79/203 (38.92%), Postives = 122/203 (60.10%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. TAIR 10
Match: AT5G42130.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 74.7 bits (182), Expect = 1.0e-13 Identity = 56/186 (30.11%), Postives = 87/186 (46.77%), Query Frame = 0
BLAST of Cucsat.G1315.T30 vs. TAIR 10
Match: AT2G30160.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12 Identity = 49/182 (26.92%), Postives = 84/182 (46.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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