Cucsat.G12902.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GACTTACCATCGGGATCCTGACGGGGTATGGTAATGGATCCGACCCATGGGTCCGGATTTATAATATTTCTTCACAAAAAGGCAAAAAAAAACAAAAAAAACACGAAATCCTTCAAACCCACAGCCGTAGAAACCGAACCATTCTCGCCCGACTCTTCTTCATCCCTCTTCTCGCCGAGACAGAGAGAGTCCCAAATCCTGTAATGAAGGCAACCAAGAGGCCAATTCAGGCCGTAGCCACATGGGTTCGACGTCAACCCCCCAAGATCAAGGCCTTTCTGGCCGTCGTCTCTGGAATGGCTGCCCTTGTTTTCTTGCGCTTTGTGGTTCATGACCACGACAATCTTTTCGTCGCTGCCGAGGCTGTTCACGCCATCGGAATCTCCGTCCTCATTTACAAACTCATGAAAGAGAGGACTTGCGCAGGTCTCGCCGTGGCCTTTTTCTATTATTATTATTATTATTATTTATTTTTGTTTAATCATTGTTGTTTGACTCTTTTCTTCATCGTGTTCAAATGCTGAATTCGTTTTAGGGTTTTAATTTGTTCTTGTTTTCTGTAGTATCATGCAATCTCCATCGATGTTTTGTTATTTTCTGATTATATAAATATTATTTTATCCATTAACAATTCGTCTTTCTTGCTCATTGAATCTTCAAATTGTGTGCGGTCTTATGAGAGACAATTGTGAAATAGGATTTTAGATTTTTTTTTTGTTTCCTCTGCATAATAAACAATTTCAGTTCTGATTTTTTGTTTTGTTGGATCTTGCCGTGTTTGTGATTGTTTTTGTTTGTAATGTTGTCGTACTCATCTTTGGTTGCAGGACTTTCACTAAAATCTCAGGAACTAACGGCAATTTTTCTAGCTGTTAGACTTTATTGTAGTTTTGTTATGGAATATGATATACATACACTATTGGATACAGCAACTCTGGTAACGACTCTTTGGGTTATTTATATGATTCGGTTTAAGCTTAGATCCAGCTACATGGAAGACAAAGATAATTTCCCCATTTACTATGTGGTAAGTTCACCGCAAACTTTTTTTAGTTTTAATTCATCAACCATTTGTTTTGCATTTTTTTAAACACAAACTCAAAATATGGGATTTGCTTTATGAGAGTCGAGTTCAAAAGAACCTACGGTTGGATCGATATTGATCTTCTGCTTAATATTGTTTGACCATTTTTGAAAGTGGATGATGTGGGAGATCTATTCTGCTATTGAGTAACCAAATAATAATGACATTTGATAACCTTGCTGCTTGTTTGGATTTGTTTTAAAGGTAGACCTGATACTCTGTTGTTCTACAATTGAACAATTGGATGATCAACTTAAAGCTGAACCGTAAGGTCCTAAAAACATTATAGCATTTACTTTGTTTTTATTGCAATGTGAAATACATTGGGTGTGATTCGAGTAGGATATTGGATTTTTTATGAATGTTCATTGTCACATCTATTCTCAACCAAGAAAAAAAAAAAGGGAAAAAGAACAAAAAAAAGGATGAAAAGAAATGTACATTGTTTATGTTTTGACGTTTTACTGCAATGGTTAATAAATCATAATCAAGGTCACTTCAGAGTCAAGTAAGAAGGCTATTATTCACTTGAACAAGAGTAGGCTCTATCTAAATTAGCTGAGTCAAGAGTAGATTCCTTTTGGCTGAGTCAACAATTCAATGTTTATTTGCTTCAATTGTTCAGATTTCCTGATAGCAGATTGGAGCTGGGAGTGGGACTGTTTTGTTCAATCTGGTTTTTAAATTACATAACCAAATGTTTGGATGTTTGGATAGGTAGCATTACTTTCTCATTCTGCCATTGATTCAAAATCATTATTTGAGAATTGTATCTCAACCAAGGCACGACATAAAGTGATTAGAACTGTATTGTAATGTTTTAGTATAAGTCATTAATCTGTTATCTCTTTGAAGCATATATTGTGGAATAGTTTAAAATGTATATTTTAAAATCCCCGGTGAACATGGAAGAATGTGATGATTTGGTAAAACTTTGAGATATGAAGTTTGGTTCTTGAAGTTACTGTTTCTGACCCTTTTTTTCCCTTTCTTATTTATTGATTTAGGCGGTACCCTGTGCTCTGTTATCTTTTGTGATCCATCCAACAACTGTGCATAACATAATTAATAGAATAGCATGGGCATTTTGTGTTTATCTTGAAGCTGTTTCAGTACTACCTCAGCTGCGCGTCATGCAAAATACAAAGGTATGGGGAATGTTTCCCGTGTTTCACCACATCTAAAGATTGTAGATTGGATTTTGCAGGTTGCCTTGCTCAAGTAATATTGGCATTTTTGGTATTTCAAGTTTATTCTGTTGTTTTCCTCCCTAATACTTTTCAAAAAGCTTTCAATAACTTGTTTTCACTGTTATTCTCTCTCCTAGATTGTTGAGCCGTTTACCGCACATTATGTGTTTGCCTTAGGAGTTGCAAGGTTCTTGAGTTGTGCACATTGGGTCCTACAGGTAGGTTAATAGAACCCGGAGACTCATATTCTACTTTGATTCCTGTATATATTTTACTTCAGTACCTTACACTCTTATGTTTCCTTAATTACTGCAGGTCCTGGATACACGTGGACGTTTGTTAACAGCATTGGGTTATGGATTATGGCCATCCATGGTTCTCCTATCAGAGATCGTTCAGACTTTCATTCTTGCTGATTTCTGTTATTATTATGTCAAGAGGTGGGTAATATAGATTGACATTGGAATCTTAATATATCTAGACAACTCCTCGATGAGCTTAACATAACATGCCATTCTGGTTGCAGTCTTGTTGGTGGACAGCTTGTTCTACGCCTTCCCTCTGGAGTGGTGTAACTTCAACAAAAAGGTGTATGCCACACGACAGGGAATGAGAGACCGTCTTGCTCATCTTAGGCTCTAATTGGGAAGGTAGGATATGGGTCTCAGTTGGACTAATGGTTATACGTGAAATGTGAAGGATGCACAAGTTTTCAAGACATAGGATATGGTCTGTAACAGTTTTTTGTTTTCTTGTTTTTTTTTTTTTTTGTTTTATATAACATGGTCTTATTTACTCTAGATTTTCTATCATCATCTTCTCTACAAAAGGTATGATTTTAAGATGGAAAATAATATGTATCACGGGGTTTTGTTGCTTCCTGTTGAAGATGAAACCATAGTTAAGCCTAACCTGCAATGCATATGGCCTGTATTGTCTATTTCTGCATTTAAGAAAGGTGTAAGGGAAATATTTATATCCAATGGATGAATCTTTCTGTAGGTATCATAAACCAACTCTAACGTCTTCTCACAGTTTTTATTGTTATCAATAAAAACATCTCATTTCATATTGGAATAGATAAGGTGAAG CTTACCATCGGGATCCTGACGGGGTATGGTAATGGATCCGACCCATGGGTCCGGATTTATAATATTTCTTCACAAAAAGGCAAAAAAAAACAAAAAAAACACGAAATCCTTCAAACCCACAGCCGTAGAAACCGAACCATTCTCGCCCGACTCTTCTTCATCCCTCTTCTCGCCGAGACAGAGAGAGTCCCAAATCCTGTAATGAAGGCAACCAAGAGGCCAATTCAGGCCGTAGCCACATGGGTTCGACGTCAACCCCCCAAGATCAAGGCCTTTCTGGCCGTCGTCTCTGGAATGGCTGCCCTTGTTTTCTTGCGCTTTGTGGTTCATGACCACGACAATCTTTTCGTCGCTGCCGAGGCTGTTCACGCCATCGGAATCTCCGTCCTCATTTACAAACTCATGAAAGAGAGGACTTGCGCAGGACTTTCACTAAAATCTCAGGAACTAACGGCAATTTTTCTAGCTGTTAGACTTTATTGTAGTTTTGTTATGGAATATGATATACATACACTATTGGATACAGCAACTCTGGTAACGACTCTTTGGGTTATTTATATGATTCGGTTTAAGCTTAGATCCAGCTACATGGAAGACAAAGATAATTTCCCCATTTACTATGTGGCGGTACCCTGTGCTCTGTTATCTTTTGTGATCCATCCAACAACTGTGCATAACATAATTAATAGAATAGCATGGGCATTTTGTGTTTATCTTGAAGCTGTTTCAGTACTACCTCAGCTGCGCGTCATGCAAAATACAAAGATTGTTGAGCCGTTTACCGCACATTATGTGTTTGCCTTAGGAGTTGCAAGGTTCTTGAGTTGTGCACATTGGGTCCTACAGGTCCTGGATACACGTGGACGTTTGTTAACAGCATTGGGTTATGGATTATGGCCATCCATGGTTCTCCTATCAGAGATCGTTCAGACTTTCATTCTTGCTGATTTCTGTTATTATTATGTCAAGAGTCTTGTTGGTGGACAGCTTGTTCTACGCCTTCCCTCTGGAGTGGTGTAA LTIGILTGYGNGSDPWVRIYNISSQKGKKKQKKHEILQTHSRRNRTILARLFFIPLLAETERVPNPVMKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGISVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYMIRFKLRSSYMEDKDNFPIYYVAVPCALLSFVIHPTTVHNIINRIAWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVLRLPSGVV Homology
BLAST of Cucsat.G12902.T3 vs. ExPASy Swiss-Prot
Match: Q09473 (ER lumen protein-retaining receptor erd-2.2 OS=Caenorhabditis elegans OX=6239 GN=erd-2.2 PE=3 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.5e-26 Identity = 76/227 (33.48%), Postives = 127/227 (55.95%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. ExPASy Swiss-Prot
Match: O44017 (ER lumen protein-retaining receptor OS=Entamoeba histolytica OX=5759 GN=ERD2 PE=3 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 3.9e-25 Identity = 71/217 (32.72%), Postives = 118/217 (54.38%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. ExPASy Swiss-Prot
Match: O76767 (ER lumen protein-retaining receptor OS=Drosophila melanogaster OX=7227 GN=KdelR PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.9e-24 Identity = 79/228 (34.65%), Postives = 128/228 (56.14%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. ExPASy Swiss-Prot
Match: Q611C8 (ER lumen protein-retaining receptor OS=Caenorhabditis briggsae OX=6238 GN=erd-2 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.1e-23 Identity = 65/215 (30.23%), Postives = 116/215 (53.95%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. ExPASy Swiss-Prot
Match: P48583 (ER lumen protein-retaining receptor erd-2.1 OS=Caenorhabditis elegans OX=6239 GN=erd-2.1 PE=3 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 3.7e-23 Identity = 71/217 (32.72%), Postives = 117/217 (53.92%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. NCBI nr
Match: KAE8651346.1 (hypothetical protein Csa_001424 [Cucumis sativus]) HSP 1 Score: 664 bits (1712), Expect = 3.54e-240 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. NCBI nr
Match: XP_004136381.1 (ER lumen protein-retaining receptor erd-2.2 [Cucumis sativus]) HSP 1 Score: 533 bits (1373), Expect = 1.21e-189 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. NCBI nr
Match: XP_008466480.1 (PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 isoform X2 [Cucumis melo] >KAA0063285.1 putative ER lumen protein-retaining receptor C28H8.4 isoform X2 [Cucumis melo var. makuwa] >TYK31490.1 putative ER lumen protein-retaining receptor C28H8.4 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 532 bits (1371), Expect = 2.43e-189 Identity = 271/272 (99.63%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. NCBI nr
Match: XP_038899681.1 (ER lumen protein-retaining receptor erd-2.2 [Benincasa hispida]) HSP 1 Score: 527 bits (1357), Expect = 3.31e-187 Identity = 267/272 (98.16%), Postives = 271/272 (99.63%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. NCBI nr
Match: XP_022940537.1 (putative ER lumen protein-retaining receptor C28H8.4 [Cucurbita moschata] >XP_022982040.1 putative ER lumen protein-retaining receptor C28H8.4 [Cucurbita maxima] >XP_023525884.1 putative ER lumen protein-retaining receptor C28H8.4 [Cucurbita pepo subsp. pepo] >KAG6608595.1 ER lumen protein-retaining receptor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037912.1 ER lumen protein-retaining receptor [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 527 bits (1357), Expect = 3.31e-187 Identity = 266/272 (97.79%), Postives = 271/272 (99.63%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. ExPASy TrEMBL
Match: A0A0A0LJ62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872180 PE=3 SV=1) HSP 1 Score: 533 bits (1373), Expect = 5.84e-190 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. ExPASy TrEMBL
Match: A0A5A7VBK9 (Putative ER lumen protein-retaining receptor C28H8.4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008060 PE=3 SV=1) HSP 1 Score: 532 bits (1371), Expect = 1.18e-189 Identity = 271/272 (99.63%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. ExPASy TrEMBL
Match: A0A1S3CRC4 (putative ER lumen protein-retaining receptor C28H8.4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503873 PE=3 SV=1) HSP 1 Score: 532 bits (1371), Expect = 1.18e-189 Identity = 271/272 (99.63%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. ExPASy TrEMBL
Match: A0A6J1J1G9 (putative ER lumen protein-retaining receptor C28H8.4 OS=Cucurbita maxima OX=3661 GN=LOC111481008 PE=3 SV=1) HSP 1 Score: 527 bits (1357), Expect = 1.60e-187 Identity = 266/272 (97.79%), Postives = 271/272 (99.63%), Query Frame = 0
BLAST of Cucsat.G12902.T3 vs. ExPASy TrEMBL
Match: A0A6J1FJW2 (putative ER lumen protein-retaining receptor C28H8.4 OS=Cucurbita moschata OX=3662 GN=LOC111446107 PE=3 SV=1) HSP 1 Score: 527 bits (1357), Expect = 1.60e-187 Identity = 266/272 (97.79%), Postives = 271/272 (99.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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