Cucsat.G12902.T14 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G12902.T14
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionER lumen protein retaining receptor family protein
Locationctg1838: 6816278 .. 6819472 (-)
RNA-Seq ExpressionCucsat.G12902.T14
SyntenyCucsat.G12902.T14
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGAAATCCTTCAAACCCACAGCCGTAGAAACCGAACCATTCTCGCCCGACTCTTCTTCATCCCTCTTCTCGCCGAGACAGAGAGAGTCCCAAATCCTGTAATGAAGGCAACCAAGAGGCCAATTCAGGCCGTAGCCACATGGGTTCGACGTCAACCCCCCAAGATCAAGGCCTTTCTGGCCGTCGTCTCTGGAATGGCTGCCCTTGTTTTCTTGCGCTTTGTGGTTCATGACCACGACAATCTTTTCGTCGCTGCCGAGGCTGTTCACGCCATCGGAATCTCCGTCCTCATTTACAAACTCATGAAAGAGAGGACTTGCGCAGGTCTCGCCGTGGCCTTTTTCTATTATTATTATTATTATTATTTATTTTTGTTTAATCATTGTTGTTTGACTCTTTTCTTCATCGTGTTCAAATGCTGAATTCGTTTTAGGGTTTTAATTTGTTCTTGTTTTCTGTAGTATCATGCAATCTCCATCGATGTTTTGTTATTTTCTGATTATATAAATATTATTTTATCCATTAACAATTCGTCTTTCTTGCTCATTGAATCTTCAAATTGTGTGCGGTCTTATGAGAGACAATTGTGAAATAGGATTTTAGATTTTTTTTTTGTTTCCTCTGCATAATAAACAATTTCAGTTCTGATTTTTTGTTTTGTTGGATCTTGCCGTGTTTGTGATTGTTTTTGTTTGTAATGTTGTCGTACTCATCTTTGGTTGCAGGACTTTCACTAAAATCTCAGGAACTAACGGCAATTTTTCTAGCTGTTAGACTTTATTGTAGTTTTGTTATGGAATATGATATACATACACTATTGGATACAGCAACTCTGGTAACGACTCTTTGGGTTATTTATATGATTCGGTTTAAGCTTAGATCCAGCTACATGGAAGACAAAGATAATTTCCCCATTTACTATGTGGTAAGTTCACCGCAAACTTTTTTTAGTTTTAATTCATCAACCATTTGTTTTGCATTTTTTTAAACACAAACTCAAAATATGGGATTTGCTTTATGAGAGTCGAGTTCAAAAGAACCTACGGTTGGATCGATATTGATCTTCTGCTTAATATTGTTTGACCATTTTTGAAAGTGGATGATGTGGGAGATCTATTCTGCTATTGAGTAACCAAATAATAATGACATTTGATAACCTTGCTGCTTGTTTGGATTTGTTTTAAAGGTAGACCTGATACTCTGTTGTTCTACAATTGAACAATTGGATGATCAACTTAAAGCTGAACCGTAAGGTCCTAAAAACATTATAGCATTTACTTTGTTTTTATTGCAATGTGAAATACATTGGGTGTGATTCGAGTAGGATATTGGATTTTTTATGAATGTTCATTGTCACATCTATTCTCAACCAAGAAAAAAAAAAAGGGAAAAAGAACAAAAAAAAGGATGAAAAGAAATGTACATTGTTTATGTTTTGACGTTTTACTGCAATGGTTAATAAATCATAATCAAGGTCACTTCAGAGTCAAGTAAGAAGGCTATTATTCACTTGAACAAGAGTAGGCTCTATCTAAATTAGCTGAGTCAAGAGTAGATTCCTTTTGGCTGAGTCAACAATTCAATGTTTATTTGCTTCAATTGTTCAGATTTCCTGATAGCAGATTGGAGCTGGGAGTGGGACTGTTTTGTTCAATCTGGTTTTTAAATTACATAACCAAATGTTTGGATGTTTGGATAGGTAGCATTACTTTCTCATTCTGCCATTGATTCAAAATCATTATTTGAGAATTGTATCTCAACCAAGGCACGACATAAAGTGATTAGAACTGTATTGTAATGTTTTAGTATAAGTCATTAATCTGTTATCTCTTTGAAGCATATATTGTGGAATAGTTTAAAATGTATATTTTAAAATCCCCGGTGAACATGGAAGAATGTGATGATTTGGTAAAACTTTGAGATATGAAGTTTGGTTCTTGAAGTTACTGTTTCTGACCCTTTTTTTCCCTTTCTTATTTATTGATTTAGGCGGTACCCTGTGCTCTGTTATCTTTTGTGATCCATCCAACAACTGTGCATAACATAATTAATAGAATAGCATGGGCATTTTGTGTTTATCTTGAAGCTGTTTCAGTACTACCTCAGCTGCGCGTCATGCAAAATACAAAGGTATGGGGAATGTTTCCCGTGTTTCACCACATCTAAAGATTGTAGATTGGATTTTGCAGGTTGCCTTGCTCAAGTAATATTGGCATTTTTGGTATTTCAAGTTTATTCTGTTGTTTTCCTCCCTAATACTTTTCAAAAAGCTTTCAATAACTTGTTTTCACTGTTATTCTCTCTCCTAGATTGTTGAGCCGTTTACCGCACATTATGTGTTTGCCTTAGGAGTTGCAAGGTTCTTGAGTTGTGCACATTGGGTCCTACAGGTAGGTTAATAGAACCCGGAGACTCATATTCTACTTTGATTCCTGTATATATTTTACTTCAGTACCTTACACTCTTATGTTTCCTTAATTACTGCAGGTCCTGGATACACGTGGACGTTTGTTAACAGCATTGGGTTATGGATTATGGCCATCCATGGTTCTCCTATCAGAGATCGTTCAGACTTTCATTCTTGCTGATTTCTGTTATTATTATGTCAAGAGGTGGGTAATATAGATTGACATTGGAATCTTAATATATCTAGACAACTCCTCGATGAGCTTAACATAACATGCCATTCTGGTTGCAGTCTTGTTGGTGGACAGCTTGTTCTACGCCTTCCCTCTGGAGTGGTGTAACTTCAACAAAAAGGTGTATGCCACACGACAGGGAATGAGAGACCGTCTTGCTCATCTTAGGCTCTAATTGGGAAGGTAGGATATGGGTCTCAGTTGGACTAATGGTTATACGTGAAATGTGAAGGATGCACAAGTTTTCAAGACATAGGATATGGTCTGTAACAGTTTTTTGTTTTCTTGTTTTTTTTTTTTTTTGTTTTATATAACATGGTCTTATTTACTCTAGATTTTCTATCATCATCTTCTCTACAAAAGGTATGATTTTAAGATGGAAAATAATATGTATCACGGGGTTTTGTTGCTTCCTGTTGAAGATGAAACCATAGTTAAGCCTAACCTGCAATGCATATGGCCTGTATTGTCTATTTCTGCATTTAAGAAAGGTGTAAGGGAAATATTTATATCCAATGGATGAATCTTTCTGTAGGTATCATAAACCAACTCTAAC

Coding sequence (CDS)

GAAATCCTTCAAACCCACAGCCGTAGAAACCGAACCATTCTCGCCCGACTCTTCTTCATCCCTCTTCTCGCCGAGACAGAGAGAGTCCCAAATCCTGTAATGAAGGCAACCAAGAGGCCAATTCAGGCCGTAGCCACATGGGTTCGACGTCAACCCCCCAAGATCAAGGCCTTTCTGGCCGTCGTCTCTGGAATGGCTGCCCTTGTTTTCTTGCGCTTTGTGGTTCATGACCACGACAATCTTTTCGTCGCTGCCGAGGCTGTTCACGCCATCGGAATCTCCGTCCTCATTTACAAACTCATGAAAGAGAGGACTTGCGCAGGACTTTCACTAAAATCTCAGGAACTAACGGCAATTTTTCTAGCTGTTAGACTTTATTGTAGTTTTGTTATGGAATATGATATACATACACTATTGGATACAGCAACTCTGGTAACGACTCTTTGGGTTATTTATATGATTCGGTTTAAGCTTAGATCCAGCTACATGGAAGACAAAGATAATTTCCCCATTTACTATGTGGTAGACCTGATACTCTGTTGTTCTACAATTGAACAATTGGATGATCAACTTAAAGCTGAACCGTAA

Protein sequence

EILQTHSRRNRTILARLFFIPLLAETERVPNPVMKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGISVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYMIRFKLRSSYMEDKDNFPIYYVVDLILCCSTIEQLDDQLKAEP
Homology
[Close]
BLAST of Cucsat.G12902.T14 vs. ExPASy Swiss-Prot
Match: Q09473 (ER lumen protein-retaining receptor erd-2.2 OS=Caenorhabditis elegans OX=6239 GN=erd-2.2 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.1e-07
Identity = 31/100 (31.00%), Postives = 58/100 (58.00%), Query Frame = 0 

Query: 80  NLF-VAAEAVHAIGISVLIYKLMKERTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 139
           N+F ++A+  H + I +L+ K+ K R+C+G+S +SQ L A+    R   L+ +++  Y  
Sbjct: 2   NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLY-- 61

Query: 140 HTLLDTATLVTTLWVIYMIRFKLRSSYMEDKDNFPIYYVV 176
           +T +    L  T   +Y++ FK RS+YM + D F +  ++
Sbjct: 62  NTTMKITFLAATYATVYLMFFKFRSTYMRESDTFRVELLI 99

[Close]
BLAST of Cucsat.G12902.T14 vs. ExPASy Swiss-Prot
Match: O42580 (ER lumen protein-retaining receptor 3 OS=Xenopus laevis OX=8355 GN=kdelr3 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-05
Identity = 33/113 (29.20%), Postives = 60/113 (53.10%), Query Frame = 0 

Query: 80  NLF-VAAEAVHAIGISVLIYKLMKERTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 139
           N+F +  +  H + I +L+ K+ K ++CAG+S KSQ L A+    R   L+  F+  Y  
Sbjct: 2   NIFRILGDVSHLLAIIILLLKMWKSKSCAGISGKSQLLFALVFTTRYLDLFTVFISPY-- 61

Query: 140 HTLLDTATLVTTLWVIYMIRFKLRSSYMEDKDNFPIYYVVDLILCCSTIEQLD 189
           +T++    L      +Y+I  KLR SY  + D F + +++  ++  S +E  +
Sbjct: 62  NTVMKIIFLACAYVTVYLIYGKLRKSYDSENDTFRLEFLLVPVIGLSFLENYE 112

[Close]
BLAST of Cucsat.G12902.T14 vs. ExPASy Swiss-Prot
Match: Q66JF2 (ER lumen protein-retaining receptor 3 OS=Xenopus tropicalis OX=8364 GN=kdelr3 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-05
Identity = 32/113 (28.32%), Postives = 61/113 (53.98%), Query Frame = 0 

Query: 80  NLF-VAAEAVHAIGISVLIYKLMKERTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 139
           N+F ++ +  H + I +L+ K+ K ++CAG+S KSQ L A+    R   L+  F+  Y  
Sbjct: 2   NVFRISGDVSHLLAIIILLLKMWKSKSCAGISGKSQLLFALVFTTRYLDLFTVFISAY-- 61

Query: 140 HTLLDTATLVTTLWVIYMIRFKLRSSYMEDKDNFPIYYVVDLILCCSTIEQLD 189
           +T++    LV     +Y+I  K R +Y  + D F + +++  ++  S +E  +
Sbjct: 62  NTVMKIVFLVCAYVTVYLIYGKFRKAYDSENDTFRLEFLLVPVIGLSFLENYE 112

[Close]
BLAST of Cucsat.G12902.T14 vs. ExPASy Swiss-Prot
Match: Q611C8 (ER lumen protein-retaining receptor OS=Caenorhabditis briggsae OX=6238 GN=erd-2 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-05
Identity = 29/98 (29.59%), Postives = 55/98 (56.12%), Query Frame = 0 

Query: 80  NLF-VAAEAVHAIGISVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIH-T 139
           N+F + A+  HA+ I +L+ K+ K R+C G+S +SQ L A+    R    F   Y ++ T
Sbjct: 2   NIFRITADLAHAVAIVILLLKIWKSRSCEGISGRSQILFAVTFFTRYLDLFTSFYSLYNT 61

Query: 140 LLDTATLVTTLWVIYMIRFKLRSSYMEDKDNFPIYYVV 176
           ++    L  ++  +Y++  K +++Y  + D F I ++V
Sbjct: 62  VMKVLFLAGSIGTVYLMWVKFKATYDRNNDTFRIEFLV 99

[Close]
BLAST of Cucsat.G12902.T14 vs. ExPASy Swiss-Prot
Match: P48583 (ER lumen protein-retaining receptor erd-2.1 OS=Caenorhabditis elegans OX=6239 GN=erd-2.1 PE=3 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 3.4e-05
Identity = 34/100 (34.00%), Postives = 56/100 (56.00%), Query Frame = 0 

Query: 80  NLF-VAAEAVHAIGISVLIYKLMKERTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 139
           NLF   A+  HAI I VL+ K+ K R+C G+S +SQ L A+    R   L+ +F   Y  
Sbjct: 2   NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFY-- 61

Query: 140 HTLLDTATLVTTLWVIYMIRFKLRSSYMEDKDNFPIYYVV 176
           +T +    LV +   +Y++  K +++Y  + D+F I ++V
Sbjct: 62  NTAMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLV 99

[Close]
BLAST of Cucsat.G12902.T14 vs. NCBI nr
Match: KAE8651346.1 (hypothetical protein Csa_001424 [Cucumis sativus])

HSP 1 Score: 339 bits (870), Expect = 1.71e-114
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0 

Query: 1   EILQTHSRRNRTILARLFFIPLLAETERVPNPVMKATKRPIQAVATWVRRQPPKIKAFLA 60
           EILQTHSRRNRTILARLFFIPLLAETERVPNPVMKATKRPIQAVATWVRRQPPKIKAFLA
Sbjct: 38  EILQTHSRRNRTILARLFFIPLLAETERVPNPVMKATKRPIQAVATWVRRQPPKIKAFLA 97

Query: 61  VVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGISVLIYKLMKERTCAGLSLKSQELTAIF 120
           VVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGISVLIYKLMKERTCAGLSLKSQELTAIF
Sbjct: 98  VVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGISVLIYKLMKERTCAGLSLKSQELTAIF 157

Query: 121 LAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYMIRFKLRSSYMEDKDNFPIYYV 174
           LAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYMIRFKLRSSYMEDKDNFPIYYV
Sbjct: 158 LAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYMIRFKLRSSYMEDKDNFPIYYV 211

[Close]
BLAST of Cucsat.G12902.T14 vs. NCBI nr
Match: XP_016903595.1 (PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 isoform X1 [Cucumis melo])

HSP 1 Score: 282 bits (722), Expect = 1.06e-92
Identity = 146/159 (91.82%), Postives = 149/159 (93.71%), Query Frame = 0 

Query: 34  MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 93
           MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI
Sbjct: 1   MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 60

Query: 94  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 153
           SVLIYKLMKERTCAGLSLKSQELTA+FLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM
Sbjct: 61  SVLIYKLMKERTCAGLSLKSQELTALFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 120

Query: 154 IRFKLRSSYMEDKDNFPIYYVVDLILCCSTIEQLDDQLK 192
           IRFKLRSSYMEDKDNFPIYYVV+L LC   +      LK
Sbjct: 121 IRFKLRSSYMEDKDNFPIYYVVNLKLCVLQLNNWMINLK 159

[Close]
BLAST of Cucsat.G12902.T14 vs. NCBI nr
Match: XP_004136381.1 (ER lumen protein-retaining receptor erd-2.2 [Cucumis sativus])

HSP 1 Score: 275 bits (704), Expect = 2.79e-90
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0 

Query: 34  MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 93
           MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI
Sbjct: 1   MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 60

Query: 94  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 153
           SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM
Sbjct: 61  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 120

Query: 154 IRFKLRSSYMEDKDNFPIYYV 174
           IRFKLRSSYMEDKDNFPIYYV
Sbjct: 121 IRFKLRSSYMEDKDNFPIYYV 141

[Close]
BLAST of Cucsat.G12902.T14 vs. NCBI nr
Match: XP_008466480.1 (PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 isoform X2 [Cucumis melo] >KAA0063285.1 putative ER lumen protein-retaining receptor C28H8.4 isoform X2 [Cucumis melo var. makuwa] >TYK31490.1 putative ER lumen protein-retaining receptor C28H8.4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 275 bits (702), Expect = 5.61e-90
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0 

Query: 34  MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 93
           MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI
Sbjct: 1   MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 60

Query: 94  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 153
           SVLIYKLMKERTCAGLSLKSQELTA+FLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM
Sbjct: 61  SVLIYKLMKERTCAGLSLKSQELTALFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 120

Query: 154 IRFKLRSSYMEDKDNFPIYYV 174
           IRFKLRSSYMEDKDNFPIYYV
Sbjct: 121 IRFKLRSSYMEDKDNFPIYYV 141

[Close]
BLAST of Cucsat.G12902.T14 vs. NCBI nr
Match: XP_022138057.1 (putative ER lumen protein-retaining receptor C28H8.4 [Momordica charantia])

HSP 1 Score: 274 bits (701), Expect = 7.96e-90
Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 34  MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 93
           MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI
Sbjct: 1   MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 60

Query: 94  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 153
           SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLD+ATLVTTLWVIYM
Sbjct: 61  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDSATLVTTLWVIYM 120

Query: 154 IRFKLRSSYMEDKDNFPIYYVV 175
           IRFKLRSSYM+DKDNFPIYYVV
Sbjct: 121 IRFKLRSSYMDDKDNFPIYYVV 142

[Close]
BLAST of Cucsat.G12902.T14 vs. ExPASy TrEMBL
Match: A0A1S4E6J6 (putative ER lumen protein-retaining receptor C28H8.4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503873 PE=3 SV=1)

HSP 1 Score: 282 bits (722), Expect = 5.13e-93
Identity = 146/159 (91.82%), Postives = 149/159 (93.71%), Query Frame = 0 

Query: 34  MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 93
           MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI
Sbjct: 1   MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 60

Query: 94  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 153
           SVLIYKLMKERTCAGLSLKSQELTA+FLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM
Sbjct: 61  SVLIYKLMKERTCAGLSLKSQELTALFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 120

Query: 154 IRFKLRSSYMEDKDNFPIYYVVDLILCCSTIEQLDDQLK 192
           IRFKLRSSYMEDKDNFPIYYVV+L LC   +      LK
Sbjct: 121 IRFKLRSSYMEDKDNFPIYYVVNLKLCVLQLNNWMINLK 159

[Close]
BLAST of Cucsat.G12902.T14 vs. ExPASy TrEMBL
Match: A0A0A0LJ62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872180 PE=3 SV=1)

HSP 1 Score: 275 bits (704), Expect = 1.35e-90
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0 

Query: 34  MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 93
           MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI
Sbjct: 1   MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 60

Query: 94  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 153
           SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM
Sbjct: 61  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 120

Query: 154 IRFKLRSSYMEDKDNFPIYYV 174
           IRFKLRSSYMEDKDNFPIYYV
Sbjct: 121 IRFKLRSSYMEDKDNFPIYYV 141

[Close]
BLAST of Cucsat.G12902.T14 vs. ExPASy TrEMBL
Match: A0A5A7VBK9 (Putative ER lumen protein-retaining receptor C28H8.4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008060 PE=3 SV=1)

HSP 1 Score: 275 bits (702), Expect = 2.72e-90
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0 

Query: 34  MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 93
           MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI
Sbjct: 1   MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 60

Query: 94  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 153
           SVLIYKLMKERTCAGLSLKSQELTA+FLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM
Sbjct: 61  SVLIYKLMKERTCAGLSLKSQELTALFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 120

Query: 154 IRFKLRSSYMEDKDNFPIYYV 174
           IRFKLRSSYMEDKDNFPIYYV
Sbjct: 121 IRFKLRSSYMEDKDNFPIYYV 141

[Close]
BLAST of Cucsat.G12902.T14 vs. ExPASy TrEMBL
Match: A0A1S3CRC4 (putative ER lumen protein-retaining receptor C28H8.4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503873 PE=3 SV=1)

HSP 1 Score: 275 bits (702), Expect = 2.72e-90
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 0 

Query: 34  MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 93
           MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI
Sbjct: 1   MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 60

Query: 94  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 153
           SVLIYKLMKERTCAGLSLKSQELTA+FLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM
Sbjct: 61  SVLIYKLMKERTCAGLSLKSQELTALFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 120

Query: 154 IRFKLRSSYMEDKDNFPIYYV 174
           IRFKLRSSYMEDKDNFPIYYV
Sbjct: 121 IRFKLRSSYMEDKDNFPIYYV 141

[Close]
BLAST of Cucsat.G12902.T14 vs. ExPASy TrEMBL
Match: A0A6J1C9Z4 (putative ER lumen protein-retaining receptor C28H8.4 OS=Momordica charantia OX=3673 GN=LOC111009313 PE=3 SV=1)

HSP 1 Score: 274 bits (701), Expect = 3.85e-90
Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 34  MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 93
           MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI
Sbjct: 1   MKATKRPIQAVATWVRRQPPKIKAFLAVVSGMAALVFLRFVVHDHDNLFVAAEAVHAIGI 60

Query: 94  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVTTLWVIYM 153
           SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLD+ATLVTTLWVIYM
Sbjct: 61  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDSATLVTTLWVIYM 120

Query: 154 IRFKLRSSYMEDKDNFPIYYVV 175
           IRFKLRSSYM+DKDNFPIYYVV
Sbjct: 121 IRFKLRSSYMDDKDNFPIYYVV 142

The following BLAST results are available for this feature:
BLAST of Cucsat.G12902.T14 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q094738.1e-0731.00ER lumen protein-retaining receptor erd-2.2 OS=Caenorhabditis elegans OX=6239 GN... [more]
O425801.5e-0529.20ER lumen protein-retaining receptor 3 OS=Xenopus laevis OX=8355 GN=kdelr3 PE=2 S... [more]
Q66JF22.0e-0528.32ER lumen protein-retaining receptor 3 OS=Xenopus tropicalis OX=8364 GN=kdelr3 PE... [more]
Q611C82.0e-0529.59ER lumen protein-retaining receptor OS=Caenorhabditis briggsae OX=6238 GN=erd-2 ... [more]
P485833.4e-0534.00ER lumen protein-retaining receptor erd-2.1 OS=Caenorhabditis elegans OX=6239 GN... [more]
BLAST of Cucsat.G12902.T14 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651346.11.71e-114100.00hypothetical protein Csa_001424 [Cucumis sativus][more]
XP_016903595.11.06e-9291.82PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 isoform X1 [Cucu... [more]
XP_004136381.12.79e-90100.00ER lumen protein-retaining receptor erd-2.2 [Cucumis sativus][more]
XP_008466480.15.61e-9099.29PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 isoform X2 [Cucu... [more]
XP_022138057.17.96e-9098.59putative ER lumen protein-retaining receptor C28H8.4 [Momordica charantia][more]
BLAST of Cucsat.G12902.T14 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E6J65.13e-9391.82putative ER lumen protein-retaining receptor C28H8.4 isoform X1 OS=Cucumis melo ... [more]
A0A0A0LJ621.35e-90100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872180 PE=3 SV=1[more]
A0A5A7VBK92.72e-9099.29Putative ER lumen protein-retaining receptor C28H8.4 isoform X2 OS=Cucumis melo ... [more]
A0A1S3CRC42.72e-9099.29putative ER lumen protein-retaining receptor C28H8.4 isoform X2 OS=Cucumis melo ... [more]
A0A6J1C9Z43.85e-9098.59putative ER lumen protein-retaining receptor C28H8.4 OS=Momordica charantia OX=3... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000133ER lumen protein retaining receptorPFAMPF00810ER_lumen_receptcoord: 105..182
e-value: 4.1E-12
score: 47.1
IPR000133ER lumen protein retaining receptorPANTHERPTHR10585ER LUMEN PROTEIN RETAINING RECEPTORcoord: 34..175
NoneNo IPR availablePANTHERPTHR10585:SF79ER LUMEN PROTEIN RETAINING RECEPTOR-RELATEDcoord: 34..175

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G12902Cucsat.G12902gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G12902.T14.E1Cucsat.G12902.T14.E1exon
Cucsat.G12902.T14.E2Cucsat.G12902.T14.E2exon
Cucsat.G12902.T14.E3Cucsat.G12902.T14.E3exon
Cucsat.G12902.T14.E4Cucsat.G12902.T14.E4exon
Cucsat.G12902.T14.E5Cucsat.G12902.T14.E5exon
Cucsat.G12902.T14.E6Cucsat.G12902.T14.E6exon
Cucsat.G12902.T14.E7Cucsat.G12902.T14.E7exon
Cucsat.G12902.T14.E8Cucsat.G12902.T14.E8exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G12902.T14.C3Cucsat.G12902.T14.C3CDS
Cucsat.G12902.T14.C2Cucsat.G12902.T14.C2CDS
Cucsat.G12902.T14.C1Cucsat.G12902.T14.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G12902.T14Cucsat.G12902.T14-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006621 protein retention in ER lumen
biological_process GO:0015031 protein transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
molecular_function GO:0046923 ER retention sequence binding