Cucsat.G12636.T4 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G12636.T4
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transcription factor bHLH130
Location	ctg1838: 1428279 .. 1430195 (-)
RNA-Seq Expression	Cucsat.G12636.T4
Synteny	Cucsat.G12636.T4

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAAAAGGCCGTGAGTGGGGAATCCCCGATTTGCCCTCTCTAGAATCCGTACAATCTCTCTCTCTCTCTCTCTCTATCATTCCAAAACAAGATTGATTCACAAATCCCATCTTATTTTCCCTTTCTTTTCTTTCCTTCCCTTTCCTTTCCTCTTCTCCTTTTTCGTTTTTATCCCCCATTCTCCTTCTTCTTTGACCCTCTGATTCTTCAATTCTTTCCTTCTTTCTTCTAATCCCTTCTCATCTACTCTCTCTTTTCACTTCCATGCCCTCTGATTAGTTATTTCTCTTGTGGGTTGGTTTCCATTATCCTTCTGCCCTTTGTGGGTTTTTAATCCCTTTTCTTCTTCTGGCTTCTTCTATAAGATCTTATCTCCACTCTGCTTACAAATTAAGCTGATTAAATCACCCATTTCCTTGGTTCTTCAAATTGACAGAGGATTTTTCTTCATTTTCCACAGGTCGGATTTTGAGGGTTTTCCGTTTCTTTTTCTTTTTAAAAAGCTTGTACTATTCTGAACTTCACCCTTTTTGACAGTGTTCTGAAAAAGGGTGATTTTGGGGAGTTTTTTTGCTCTCTTTCATTCATGGGTACGAATACCCACCAGAGTTTTCAGCAACCCAATTCGGCGTTGCTTCGATTTCGCTCCGCTCCAAGTTCTTTGTTTGCGGATTTCTCTCATGGGATTGATTCTAAGCGCTTGAATCCTTTCGAGGGCTCTGAATCGGAGCGGTTGGTTTCTAGATTTGGGAGTCGCGCTGACGGTTGTAATAGTAATGATTCGGAATCTCCGGTAGCCGGAAACTACTCTTCTGGTCTGCCGCCGCATTATCCTCGGCTGAGCTCCGCCGTTAACTGTTCTTCTTCTTCTTCCTCCTCTTCTTGTTCTTCTTCTTCCTCCTCAATGTGTAGCTCACTTGGTTTTTTGGGTTCCAATCTTGTTCGTCAGAGTAGCTCTCCTGCTGGGGTTCTCTCTCAACTCAATCAAAATGGTGAATGAGTCTCCCCATCTTGTTCTGTTTCTACTTTTTTTTCTTTTTTTTTTTGCATAACTTTAGAGAAATTTTAAGTTGCATTAATGGCATAAGTCAACGTATCCTATGAACTTTACATCCCATTTCATGTTTAATCTGATAGACGAACTGATCCAATAAACGGATTTAGAATTTTGAAGTTTTCTATAATTACTTCTTGTTGATGTGATTTGATGTTCATATCTCTGAATTGTTTGTTGAGTTATGTTCTTTGTAGAAATGCATTTTATGGTTAGATTTTGATGAGTTTGAGTGTAATTGTAGGCTATGGTGGGGGAAGTTTCAGTAGGCTGAGTGGTAATAACAATGGAGTGGAAGTTGTTAGTCCATCATCAAACAGATTGAACTCTCAAATTAGCTTCTCTTCTTTGGTGCCTTCTTCTTTGGGGATGTTTCCTCAGATCTCTGAACAAGTAGTTGGGAATGAAAAGCTTTCAAATAGCAATAATGGAGAGACTCAGTTCTTTACTCCATCCGGGTTCCCCTTTGCTTCCTGGAACGAATCGTCTCAGTTCTCGGAAACTTTTCCTGGCATAAAGCGTGATCCAGATAGCAATAAGAAGTTCTCCAGTGGTCATCAGGTATGAATCAATTGATTAGCTGAGATGATCGTAAGCATGTTGTATATTTCCTTTCCTTTCTGTATATGTTGTTAACATTGAGGGAGTTTGGTGTTAATTAGAATGGCGAGATCGGGAACCGAGTTCATTTGCTATCGCACCATTTGAGCTTGCCCAAGAACGTATCCGATGTTGCTTCCATTGAGAAGTTGTTACAGCTCCAAGACGCCGTTCCTTGCAGAATTAGAGCAAAACGAGGCTGTGCAACTCATCCACGCAGCATTGCAGAACGGGTGAGAGAAGTCATCGAGCTATATCGACT

Coding sequence (CDS)

ATGGGTACGAATACCCACCAGAGTTTTCAGCAACCCAATTCGGCGTTGCTTCGATTTCGCTCCGCTCCAAGTTCTTTGTTTGCGGATTTCTCTCATGGGATTGATTCTAAGCGCTTGAATCCTTTCGAGGGCTCTGAATCGGAGCGGTTGGTTTCTAGATTTGGGAGTCGCGCTGACGGTTGTAATAGTAATGATTCGGAATCTCCGGTAGCCGGAAACTACTCTTCTGGTCTGCCGCCGCATTATCCTCGGCTGAGCTCCGCCGTTAACTGTTCTTCTTCTTCTTCCTCCTCTTCTTGTTCTTCTTCTTCCTCCTCAATGTGTAGCTCACTTGGTTTTTTGGGTTCCAATCTTGTTCGTCAGAGTAGCTCTCCTGCTGGGGTTCTCTCTCAACTCAATCAAAATGGCTATGGTGGGGGAAGTTTCAGTAGGCTGAGTGGTAATAACAATGGAGTGGAAGTTGTTAGTCCATCATCAAACAGATTGAACTCTCAAATTAGCTTCTCTTCTTTGGTGCCTTCTTCTTTGGGGATGTTTCCTCAGATCTCTGAACAAGTAGTTGGGAATGAAAAGCTTTCAAATAGCAATAATGGAGAGACTCAGTTCTTTACTCCATCCGGGTTCCCCTTTGCTTCCTGGAACGAATCGTCTCAGTTCTCGGAAACTTTTCCTGGCATAAAGCGTGATCCAGATAGCAATAAGAAGTTCTCCAGTGGTCATCAGAATGGCGAGATCGGGAACCGAGTTCATTTGCTATCGCACCATTTGAGCTTGCCCAAGAACGTATCCGATGTTGCTTCCATTGAGAAGTTGTTACAGCTCCAAGACGCCGTTCCTTGCAGAATTAGAGCAAAACGAGGCTGTGCAACTCATCCACGCAGCATTGCAGAACGGGTGAGAGAAGTCATCGAGCTATATCGA

Protein sequence

MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADGCNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSSMCSSLGFLGSNLVRQSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVPSSLGMFPQISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKKFSSGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERVREVIELYR

Homology

[Close]

BLAST of Cucsat.G12636.T4 vs. ExPASy Swiss-Prot
Match: Q66GR3 (Transcription factor bHLH130 OS=Arabidopsis thaliana OX=3702 GN=BHLH130 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.3e-40
Identity = 140/337 (41.54%), Postives = 176/337 (52.23%), Query Frame = 0


Query: 1   MGTNTHQSFQQP-NSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRF----G 60
           M +N H     P  S LLRFRSAPSS+ A F   +D  ++    G +S+RL+SRF    G
Sbjct: 1   MDSNNHLYDPNPTGSGLLRFRSAPSSVLAAF---VDDDKI----GFDSDRLLSRFVTSNG 60

Query: 61  SRAD-GCNSNDSESPVAGNYSS-------------------GLPPHYPRLSSAVNCSSSS 120
              D G    + +SPV+   +S                   GLPPHYPR S  +      
Sbjct: 61  VNGDLGSPKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSKGI------ 120

Query: 121 SSSSCSSSSSSMCSSLGF-------LGSNLVRQSSSPAGVLSQL-NQNGYGGGSFSRLSG 180
                  +S  +   LG        + SNL+RQSSSPAG+ + L +QNGY  GS   L  
Sbjct: 121 ------MNSVGLDQFLGINNHHTKPVESNLLRQSSSPAGMFTNLSDQNGY--GSMRNLMN 180

Query: 181 NNNGVEVVSPS-SNRLNSQISFSSLVPSSLGMFPQISEQVVGNEKLSNSNNGETQFFTPS 240
                E  SPS SN L    S SS  PSSLGM  QI E                     +
Sbjct: 181 YEEDEE--SPSNSNGLRRHCSLSSRPPSSLGMLSQIPE-----------------IAPET 240

Query: 241 GFPFASWNESSQFSETFPGIKRDPDSNKKFSSGHQNGEIGNRVHLLSHHLSLPKN---VS 300
            FP++ WN+ S F +    +KR+ + + K   G QNGE GNR+ LLSHHLSLPK+    S
Sbjct: 241 NFPYSHWNDPSSFIDNLSSLKREAEDDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTAS 297

[Close]

BLAST of Cucsat.G12636.T4 vs. ExPASy Swiss-Prot
Match: Q9C690 (Transcription factor bHLH122 OS=Arabidopsis thaliana OX=3702 GN=BHLH122 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.1e-13
Identity = 96/323 (29.72%), Postives = 153/323 (47.37%), Query Frame = 0


Query: 6   HQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADGCNSND 65
           HQ  +  NS L+R++SAPSS F+ F   I+     P    E+ER++S F    D  ++ D
Sbjct: 15  HQHQRPRNSGLIRYQSAPSSYFSSFGESIEEFLDRP-TSPETERILSGFLQTTDTSDNVD 74

Query: 66  SESPVAGNYSSGLPPHYPRL-----SSAVNCSSSSSSSSCSSSSSSMCS-----SLGFLG 125
           S      N S G     P +      + +  ++++++     S     S     S+G++ 
Sbjct: 75  SFLHHTFN-SDGTEKKPPEVKTEDEDAEIPVTATATAMEVVVSGDGEISVNPEVSIGYVA 134

Query: 126 S-----------------NLVRQSSSPAGVLSQLN-QNGYGGGSFSRLSGNNNGVEVVSP 185
           S                 NL R +SSPAG+ S ++ +  Y   +  +  G   G  V+S 
Sbjct: 135 SVSRNKRPREKDDRTPVNNLARHNSSPAGLFSSIDVETAY--AAVMKSMGGFGGSNVMST 194

Query: 186 SSNRLNSQISFSSLVPSSLGMFPQISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESS 245
           S+   +S    S L+P +      ISE  V   K   S+    +  +  GF  +  NE S
Sbjct: 195 SNTEASSLTPRSKLLPPTSRAMSPISEVDV---KPGFSSRLPPRTLS-GGFNRSFGNEGS 254

Query: 246 QFSETFPGIKRDPDSNKKFSSGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDA 301
             S+     +       ++ +  ++ +  +R   L+HH+SLPK++SD+  +     L D+
Sbjct: 255 ASSKLTALARTQSGGLDQYKT--KDEDSASRRPPLAHHMSLPKSLSDIEQL-----LSDS 314

[Close]

BLAST of Cucsat.G12636.T4 vs. ExPASy Swiss-Prot
Match: Q9ZW81 (Transcription factor bHLH129 OS=Arabidopsis thaliana OX=3702 GN=BHLH129 PE=3 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 4.4e-07
Identity = 73/207 (35.27%), Postives = 97/207 (46.86%), Query Frame = 0


Query: 109 SSLGF-----LGSNLVRQSSSPAGVLSQ---LNQNGYGGGSFSRLSGNNNGVEVVSPSSN 168
           SS+GF       S+L R  SSPAG   Q    + NG  G S  R +G   G     PS  
Sbjct: 68  SSIGFDSNASSSSSLFRHRSSPAGFYDQHLPTDPNG-TGFSLGRPNGGYGGGGEQGPS-- 127

Query: 169 RLNSQISFSSLVPS--SLGMFPQISEQVVGNEKLSNSNNGETQFFTPSGFPFA-SWNESS 228
           RL S++ FSS   S       P+ISE     E  + + NG        G     +W+ SS
Sbjct: 128 RLKSELRFSSGSSSHQEHNSLPRISEV----EAAAAARNGVASSSMSFGNNRTNNWDNSS 187

Query: 229 ---QFSETFPGIKRDPDSNKKFSSGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQL 288
               F+   PG KR  +S+                  L    S+P+   ++A++E L+ +
Sbjct: 188 SHISFTIDQPG-KRSKNSD---------------FFTLETQYSMPQTTLEMATMENLMNI 247

Query: 289 -QDAVPCRIRAKRGCATHPRSIAERVR 301
            +D+VPCR RAKRG ATHPRSIAER R
Sbjct: 248 PEDSVPCRARAKRGFATHPRSIAERER 251

[Close]

BLAST of Cucsat.G12636.T4 vs. ExPASy Swiss-Prot
Match: Q9C8P8 (Transcription factor bHLH80 OS=Arabidopsis thaliana OX=3702 GN=BHLH80 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06
Identity = 53/163 (32.52%), Postives = 75/163 (46.01%), Query Frame = 0


Query: 145 LSGNNNGVEVVSPSSNRLNSQISFSSLVPSSL-------GMFPQISEQVVGNEKLSNSNN 204
           L+GNNN   V++      +    F S V   L       G   Q S      + LS S +
Sbjct: 59  LTGNNNSGGVITSR----DDSFEFLSSVEQGLYNHHQGGGFHRQNSSPA---DFLSGSGS 118

Query: 205 GETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKKFSSGHQNGEIGNRVHLLSHHLS 264
           G   +F+  G P A+++  S   +  P  KR  D   +FSS  +  ++            
Sbjct: 119 GTDGYFSNFGIP-ANYDYLSTNVDISP-TKRSRDMETQFSSQLKEEQMSG---------- 178

Query: 265 LPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERVR 301
               +S +  +      +D+VPCR+RAKRGCATHPRSIAERVR
Sbjct: 179 ---GISGMMDMNMDKIFEDSVPCRVRAKRGCATHPRSIAERVR 199

[Close]

BLAST of Cucsat.G12636.T4 vs. ExPASy Swiss-Prot
Match: Q9M0R0 (Transcription factor bHLH81 OS=Arabidopsis thaliana OX=3702 GN=BHLH81 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.4e-05
Identity = 58/193 (30.05%), Postives = 88/193 (45.60%), Query Frame = 0


Query: 112 GFLGSNLVRQSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRL-NSQISFSS 171
           G   S L R  S+PA  L  L +          L  N    ++++ +SN L  S+ SF  
Sbjct: 23  GLSRSGLSRIRSAPATWLEALLEE----DEEESLKPNLGLTDLLTGNSNDLPTSRGSFEF 82

Query: 172 LVPSSLGMFPQ---ISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIK 231
            +P   G++ Q     +     + LS S+     F   + + + S N      +  PG K
Sbjct: 83  PIPVEQGLYQQGGFHRQNSTPADFLSGSDGFIQSFGIQANYDYLSGN-----IDVSPGSK 142

Query: 232 RDPDSNKKFSSGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRG 291
           R  +    FSS     E  +++        +P  VS ++ +     ++D+V  R+RAKRG
Sbjct: 143 RSREMEALFSS----PEFTSQMKGEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAKRG 202

Query: 292 CATHPRSIAERVR 301
           CATHPRSIAERVR
Sbjct: 203 CATHPRSIAERVR 202

[Close]

BLAST of Cucsat.G12636.T4 vs. NCBI nr
Match: XP_031737624.1 (transcription factor bHLH130 [Cucumis sativus] >KGN59326.1 hypothetical protein Csa_002059 [Cucumis sativus])

HSP 1 Score: 567 bits (1461), Expect = 4.19e-202
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60
           MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG
Sbjct: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60

Query: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSSMCSSLGFLGSNLVR 120
           CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSSMCSSLGFLGSNLVR
Sbjct: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSSMCSSLGFLGSNLVR 120

Query: 121 QSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVPSSLGMFP 180
           QSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVPSSLGMFP
Sbjct: 121 QSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVPSSLGMFP 180

Query: 181 QISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKKFSSGH 240
           QISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKKFSSGH
Sbjct: 181 QISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKKFSSGH 240

Query: 241 QNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERVR 300
           QNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERVR
Sbjct: 241 QNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERVR 300

[Close]

BLAST of Cucsat.G12636.T4 vs. NCBI nr
Match: XP_008443086.1 (PREDICTED: transcription factor bHLH130 [Cucumis melo] >KAA0043711.1 transcription factor bHLH130 [Cucumis melo var. makuwa] >TYK25423.1 transcription factor bHLH130 [Cucumis melo var. makuwa])

HSP 1 Score: 545 bits (1403), Expect = 3.18e-193
Identity = 290/303 (95.71%), Postives = 294/303 (97.03%), Query Frame = 0


Query: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60
           MGTNTHQSFQQPNSALLRFRSAPSSLFADF+HGIDSKRLNPFE SESERLVSRFGSR  G
Sbjct: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFAHGIDSKRLNPFESSESERLVSRFGSRGGG 60

Query: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSS---CSSSSSSMCSSLGFLGSN 120
           CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSS   CSSSSSSMCSSLGFLGSN
Sbjct: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSSSSCSSSSSSMCSSLGFLGSN 120

Query: 121 LVRQSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVPSSLG 180
           LVRQSSSPAGVLSQ NQNGYGGGSFSRLSGNNNG EVVSPSSNRLNSQISFSSL+PSSLG
Sbjct: 121 LVRQSSSPAGVLSQFNQNGYGGGSFSRLSGNNNGGEVVSPSSNRLNSQISFSSLLPSSLG 180

Query: 181 MFPQISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKKFS 240
           MFPQISEQVVGNEKLSNSNNGETQ+FTPSGFPFASWNESSQFSETFPG+KRDPDSNKKFS
Sbjct: 181 MFPQISEQVVGNEKLSNSNNGETQYFTPSGFPFASWNESSQFSETFPGVKRDPDSNKKFS 240

Query: 241 SGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAE 300
           S HQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAE
Sbjct: 241 SSHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAE 300

[Close]

BLAST of Cucsat.G12636.T4 vs. NCBI nr
Match: XP_038906316.1 (transcription factor bHLH130 [Benincasa hispida])

HSP 1 Score: 501 bits (1291), Expect = 3.09e-176
Identity = 274/301 (91.03%), Postives = 283/301 (94.02%), Query Frame = 0


Query: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60
           MG+NTHQSFQQPNSALLRFRSAPSSLFADF+ GIDSKR NPFEGSESERLVSRFGSR  G
Sbjct: 1   MGSNTHQSFQQPNSALLRFRSAPSSLFADFAQGIDSKRSNPFEGSESERLVSRFGSRGGG 60

Query: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSSMCSSLGFLGSNLVR 120
            NSNDSESPVAGNY+SGLPPHYPRL+SAVNCSSSSSSS CSSSSSSMCSSLGFLG NLVR
Sbjct: 61  GNSNDSESPVAGNYTSGLPPHYPRLNSAVNCSSSSSSS-CSSSSSSMCSSLGFLGPNLVR 120

Query: 121 QSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVPSSLGMFP 180
           QSSSPAGV SQLNQNG+GGG+FSRLSGNNNG EV SPSSNRL SQISFSSL+PSSLGMFP
Sbjct: 121 QSSSPAGVFSQLNQNGFGGGNFSRLSGNNNGGEV-SPSSNRLTSQISFSSLLPSSLGMFP 180

Query: 181 QISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKK-FSSG 240
           QISEQVVGNEKL+NSNNGETQFFTPSGFPFASWNESSQF ETF  IKRDPDSNKK FSS 
Sbjct: 181 QISEQVVGNEKLANSNNGETQFFTPSGFPFASWNESSQFPETFTSIKRDPDSNKKLFSSS 240

Query: 241 HQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERV 300
            QNGEIGNRVHLLSHHLSLPKN +DVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERV
Sbjct: 241 PQNGEIGNRVHLLSHHLSLPKNATDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERV 299

[Close]

BLAST of Cucsat.G12636.T4 vs. NCBI nr
Match: XP_022935700.1 (transcription factor bHLH130-like [Cucurbita moschata])

HSP 1 Score: 429 bits (1104), Expect = 6.72e-148
Identity = 241/308 (78.25%), Postives = 260/308 (84.42%), Query Frame = 0


Query: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60
           MG+NTH SFQQPNSALLRFRSAPSSL AD++ GIDSKR NPFE SESER+VSRFGSR   
Sbjct: 1   MGSNTHHSFQQPNSALLRFRSAPSSLLADYAQGIDSKRSNPFESSESERMVSRFGSR--- 60

Query: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSS-------MCSSLGF 120
              NDSESP AGNY SGLPPHYPR S+AVNCSSSSSSSS SSSSSS       M SS+GF
Sbjct: 61  ---NDSESPAAGNYCSGLPPHYPRPSTAVNCSSSSSSSSSSSSSSSSSSSSSSMSSSVGF 120

Query: 121 LGSNLVRQSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVP 180
           LGSNLVRQSSSPAGV SQLNQNGYGGGSF+RLSG+NN              ++SFSSL+P
Sbjct: 121 LGSNLVRQSSSPAGVFSQLNQNGYGGGSFNRLSGSNNNG----------GGELSFSSLLP 180

Query: 181 SSLGMFPQISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSN 240
           SSLGM   ISEQV+GNEKL+N+N GE QFFTP+GFPFASWNESSQFS+TFP +K DPDSN
Sbjct: 181 SSLGMLSHISEQVIGNEKLTNTN-GEPQFFTPTGFPFASWNESSQFSDTFPVVKHDPDSN 240

Query: 241 KK-FSSGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHP 300
           +K FSS HQNGEIGNRVHLLSHHLSLPKN SD+ASIEKLLQLQDAVPCRIRAKRGCATHP
Sbjct: 241 RKLFSSSHQNGEIGNRVHLLSHHLSLPKNTSDIASIEKLLQLQDAVPCRIRAKRGCATHP 291

[Close]

BLAST of Cucsat.G12636.T4 vs. NCBI nr
Match: XP_023526322.1 (transcription factor bHLH130-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427 bits (1097), Expect = 8.35e-147
Identity = 241/310 (77.74%), Postives = 258/310 (83.23%), Query Frame = 0


Query: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60
           MG+NTH SFQQPNSALLRFRSAPSSL AD++ GIDSKR NPFE SESER+VSRFGSR   
Sbjct: 1   MGSNTHHSFQQPNSALLRFRSAPSSLLADYAQGIDSKRSNPFESSESERMVSRFGSR--- 60

Query: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSS---------MCSSL 120
              NDSESP AGNY SGLPPHYPR S+AVNCSSSSSSSS SSSSSS         M SSL
Sbjct: 61  ---NDSESPAAGNYCSGLPPHYPRPSTAVNCSSSSSSSSSSSSSSSSSSSSSSSSMSSSL 120

Query: 121 GFLGSNLVRQSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSL 180
           GFLGSNLVRQSSSPAGV SQLNQNGYGGGSF+RLSG+NN              ++SFSSL
Sbjct: 121 GFLGSNLVRQSSSPAGVFSQLNQNGYGGGSFNRLSGSNNNG----------GGELSFSSL 180

Query: 181 VPSSLGMFPQISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPD 240
           +PSSLGM   ISEQV+GNEKL+N+N GE QFFTP+GFPFASWNESSQFSE FP +K DPD
Sbjct: 181 LPSSLGMLSHISEQVIGNEKLTNTN-GEPQFFTPTGFPFASWNESSQFSEPFPVVKHDPD 240

Query: 241 SNKK-FSSGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCAT 300
           SN+K FSS HQNGEIGNRVHLLSHHLSLPKN SD+ SIEKLLQLQDAVPCRIRAKRGCAT
Sbjct: 241 SNRKLFSSSHQNGEIGNRVHLLSHHLSLPKNTSDIPSIEKLLQLQDAVPCRIRAKRGCAT 293

[Close]

BLAST of Cucsat.G12636.T4 vs. ExPASy TrEMBL
Match: A0A0A0LH01 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G810510 PE=4 SV=1)

HSP 1 Score: 567 bits (1461), Expect = 2.03e-202
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60
           MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG
Sbjct: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60

Query: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSSMCSSLGFLGSNLVR 120
           CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSSMCSSLGFLGSNLVR
Sbjct: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSSMCSSLGFLGSNLVR 120

Query: 121 QSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVPSSLGMFP 180
           QSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVPSSLGMFP
Sbjct: 121 QSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVPSSLGMFP 180

Query: 181 QISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKKFSSGH 240
           QISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKKFSSGH
Sbjct: 181 QISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKKFSSGH 240

Query: 241 QNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERVR 300
           QNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERVR
Sbjct: 241 QNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERVR 300

[Close]

BLAST of Cucsat.G12636.T4 vs. ExPASy TrEMBL
Match: A0A5D3DP51 (Transcription factor bHLH130 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005660 PE=4 SV=1)

HSP 1 Score: 545 bits (1403), Expect = 1.54e-193
Identity = 290/303 (95.71%), Postives = 294/303 (97.03%), Query Frame = 0


Query: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60
           MGTNTHQSFQQPNSALLRFRSAPSSLFADF+HGIDSKRLNPFE SESERLVSRFGSR  G
Sbjct: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFAHGIDSKRLNPFESSESERLVSRFGSRGGG 60

Query: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSS---CSSSSSSMCSSLGFLGSN 120
           CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSS   CSSSSSSMCSSLGFLGSN
Sbjct: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSSSSCSSSSSSMCSSLGFLGSN 120

Query: 121 LVRQSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVPSSLG 180
           LVRQSSSPAGVLSQ NQNGYGGGSFSRLSGNNNG EVVSPSSNRLNSQISFSSL+PSSLG
Sbjct: 121 LVRQSSSPAGVLSQFNQNGYGGGSFSRLSGNNNGGEVVSPSSNRLNSQISFSSLLPSSLG 180

Query: 181 MFPQISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKKFS 240
           MFPQISEQVVGNEKLSNSNNGETQ+FTPSGFPFASWNESSQFSETFPG+KRDPDSNKKFS
Sbjct: 181 MFPQISEQVVGNEKLSNSNNGETQYFTPSGFPFASWNESSQFSETFPGVKRDPDSNKKFS 240

Query: 241 SGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAE 300
           S HQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAE
Sbjct: 241 SSHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAE 300

[Close]

BLAST of Cucsat.G12636.T4 vs. ExPASy TrEMBL
Match: A0A1S3B7A4 (transcription factor bHLH130 OS=Cucumis melo OX=3656 GN=LOC103486790 PE=4 SV=1)

HSP 1 Score: 545 bits (1403), Expect = 1.54e-193
Identity = 290/303 (95.71%), Postives = 294/303 (97.03%), Query Frame = 0


Query: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60
           MGTNTHQSFQQPNSALLRFRSAPSSLFADF+HGIDSKRLNPFE SESERLVSRFGSR  G
Sbjct: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFAHGIDSKRLNPFESSESERLVSRFGSRGGG 60

Query: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSS---CSSSSSSMCSSLGFLGSN 120
           CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSS   CSSSSSSMCSSLGFLGSN
Sbjct: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSSSSCSSSSSSMCSSLGFLGSN 120

Query: 121 LVRQSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVPSSLG 180
           LVRQSSSPAGVLSQ NQNGYGGGSFSRLSGNNNG EVVSPSSNRLNSQISFSSL+PSSLG
Sbjct: 121 LVRQSSSPAGVLSQFNQNGYGGGSFSRLSGNNNGGEVVSPSSNRLNSQISFSSLLPSSLG 180

Query: 181 MFPQISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSNKKFS 240
           MFPQISEQVVGNEKLSNSNNGETQ+FTPSGFPFASWNESSQFSETFPG+KRDPDSNKKFS
Sbjct: 181 MFPQISEQVVGNEKLSNSNNGETQYFTPSGFPFASWNESSQFSETFPGVKRDPDSNKKFS 240

Query: 241 SGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAE 300
           S HQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAE
Sbjct: 241 SSHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAE 300

[Close]

BLAST of Cucsat.G12636.T4 vs. ExPASy TrEMBL
Match: A0A6J1FBE1 (transcription factor bHLH130-like OS=Cucurbita moschata OX=3662 GN=LOC111442479 PE=4 SV=1)

HSP 1 Score: 429 bits (1104), Expect = 3.25e-148
Identity = 241/308 (78.25%), Postives = 260/308 (84.42%), Query Frame = 0


Query: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60
           MG+NTH SFQQPNSALLRFRSAPSSL AD++ GIDSKR NPFE SESER+VSRFGSR   
Sbjct: 1   MGSNTHHSFQQPNSALLRFRSAPSSLLADYAQGIDSKRSNPFESSESERMVSRFGSR--- 60

Query: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSS-------MCSSLGF 120
              NDSESP AGNY SGLPPHYPR S+AVNCSSSSSSSS SSSSSS       M SS+GF
Sbjct: 61  ---NDSESPAAGNYCSGLPPHYPRPSTAVNCSSSSSSSSSSSSSSSSSSSSSSMSSSVGF 120

Query: 121 LGSNLVRQSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQISFSSLVP 180
           LGSNLVRQSSSPAGV SQLNQNGYGGGSF+RLSG+NN              ++SFSSL+P
Sbjct: 121 LGSNLVRQSSSPAGVFSQLNQNGYGGGSFNRLSGSNNNG----------GGELSFSSLLP 180

Query: 181 SSLGMFPQISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSN 240
           SSLGM   ISEQV+GNEKL+N+N GE QFFTP+GFPFASWNESSQFS+TFP +K DPDSN
Sbjct: 181 SSLGMLSHISEQVIGNEKLTNTN-GEPQFFTPTGFPFASWNESSQFSDTFPVVKHDPDSN 240

Query: 241 KK-FSSGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHP 300
           +K FSS HQNGEIGNRVHLLSHHLSLPKN SD+ASIEKLLQLQDAVPCRIRAKRGCATHP
Sbjct: 241 RKLFSSSHQNGEIGNRVHLLSHHLSLPKNTSDIASIEKLLQLQDAVPCRIRAKRGCATHP 291

[Close]

BLAST of Cucsat.G12636.T4 vs. ExPASy TrEMBL
Match: A0A6J1J0X5 (transcription factor bHLH130-like OS=Cucurbita maxima OX=3661 GN=LOC111481678 PE=4 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 1.02e-143
Identity = 239/314 (76.11%), Postives = 256/314 (81.53%), Query Frame = 0


Query: 1   MGTNTHQSFQQPNSALLRFRSAPSSLFADFSHGIDSKRLNPFEGSESERLVSRFGSRADG 60
           MG+NTH SFQQPNSALLRFRSAPSSL AD++ GIDSKR NPFE SESER+VSRFGSR   
Sbjct: 1   MGSNTHHSFQQPNSALLRFRSAPSSLLADYAQGIDSKRSNPFECSESERMVSRFGSR--- 60

Query: 61  CNSNDSESPVAGNYSSGLPPHYPRLSSAVNCSSSSSSSSCSSSSSS-------------M 120
              N SESP  GNY SGLPPHYPR S+AVNCSSSSSSSS SSSSSS             M
Sbjct: 61  ---NGSESPALGNYCSGLPPHYPRPSTAVNCSSSSSSSSSSSSSSSSSSSSSSSSSSSSM 120

Query: 121 CSSLGFLGSNLVRQSSSPAGVLSQLNQNGYGGGSFSRLSGNNNGVEVVSPSSNRLNSQIS 180
            SSLGFLGSNLVRQSSSPAGV SQLNQNGYGGGSF+RLSG+NN              ++S
Sbjct: 121 SSSLGFLGSNLVRQSSSPAGVFSQLNQNGYGGGSFNRLSGSNNNG----------GGELS 180

Query: 181 FSSLVPSSLGMFPQISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIK 240
           FSSL+PSSLGM   ISEQV+GNEKL+N+N GE QFFTP+GFPFASWNESSQFSE FP +K
Sbjct: 181 FSSLLPSSLGMLSHISEQVIGNEKLTNTN-GEPQFFTPTGFPFASWNESSQFSEPFPVVK 240

Query: 241 RDPDSNKK-FSSGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQLQDAVPCRIRAKR 300
            DPDSN+K FSS HQNGEIGNRVHLLSH LSLPKN SD+ASIEKLLQLQDAVPCRIRAKR
Sbjct: 241 HDPDSNRKLFSSSHQNGEIGNRVHLLSHRLSLPKNTSDIASIEKLLQLQDAVPCRIRAKR 297

The following BLAST results are available for this feature:

BLAST of Cucsat.G12636.T4 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q66GR3	1.3e-40	41.54	Transcription factor bHLH130 OS=Arabidopsis thaliana OX=3702 GN=BHLH130 PE=1 SV=...	[more]
Q9C690	4.1e-13	29.72	Transcription factor bHLH122 OS=Arabidopsis thaliana OX=3702 GN=BHLH122 PE=1 SV=...	[more]
Q9ZW81	4.4e-07	35.27	Transcription factor bHLH129 OS=Arabidopsis thaliana OX=3702 GN=BHLH129 PE=3 SV=...	[more]
Q9C8P8	2.2e-06	32.52	Transcription factor bHLH80 OS=Arabidopsis thaliana OX=3702 GN=BHLH80 PE=2 SV=1	[more]
Q9M0R0	2.4e-05	30.05	Transcription factor bHLH81 OS=Arabidopsis thaliana OX=3702 GN=BHLH81 PE=2 SV=1	[more]

BLAST of Cucsat.G12636.T4 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737624.1	4.19e-202	100.00	transcription factor bHLH130 [Cucumis sativus] >KGN59326.1 hypothetical protein ...	[more]
XP_008443086.1	3.18e-193	95.71	PREDICTED: transcription factor bHLH130 [Cucumis melo] >KAA0043711.1 transcripti...	[more]
XP_038906316.1	3.09e-176	91.03	transcription factor bHLH130 [Benincasa hispida]	[more]
XP_022935700.1	6.72e-148	78.25	transcription factor bHLH130-like [Cucurbita moschata]	[more]
XP_023526322.1	8.35e-147	77.74	transcription factor bHLH130-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G12636.T4 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH01	2.03e-202	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G810510 PE=4 S...	[more]
A0A5D3DP51	1.54e-193	95.71	Transcription factor bHLH130 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3B7A4	1.54e-193	95.71	transcription factor bHLH130 OS=Cucumis melo OX=3656 GN=LOC103486790 PE=4 SV=1	[more]
A0A6J1FBE1	3.25e-148	78.25	transcription factor bHLH130-like OS=Cucurbita moschata OX=3662 GN=LOC111442479 ...	[more]
A0A6J1J0X5	1.02e-143	76.11	transcription factor bHLH130-like OS=Cucurbita maxima OX=3661 GN=LOC111481678 PE...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..73
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 8..300
None	No IPR available	PANTHER	PTHR16223:SF236	TRANSCRIPTION FACTOR BHLH130	coord: 8..300

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G12636	Cucsat.G12636	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12636.T4.E1	Cucsat.G12636.T4.E1	exon
Cucsat.G12636.T4.E2	Cucsat.G12636.T4.E2	exon
Cucsat.G12636.T4.E3	Cucsat.G12636.T4.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12636.T4.C3	Cucsat.G12636.T4.C3	CDS
Cucsat.G12636.T4.C2	Cucsat.G12636.T4.C2	CDS
Cucsat.G12636.T4.C1	Cucsat.G12636.T4.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12636.T4	Cucsat.G12636.T4-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity