Cucsat.G12179.T5 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G12179.T5
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionTOM1-like protein 2
Locationctg1837: 1754167 .. 1761114 (-)
RNA-Seq ExpressionCucsat.G12179.T5
SyntenyCucsat.G12179.T5
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAAAAAAAAAAGGCATTTGTTTTGTATTGATTTTCGGGTTGTTTTATTATTATTATTAATTTTTCGGGGGAAGAAAAGAAAGCGGAGAGTGAGAGGAAGGGAGAGAGAGAGAGAGAGTTTGACGAATGTATGTGGTATGAGAAGAAAACAAGAAAATCCCTAAAAAGTTACTCTGAACTTTCCAATTTCTTTCGTCGTAGGGACGATGGCGGTGGATTAGCCTGCAAAATTATGCTTCTGAGTCTTCCATAATTCCCCTTCTCATCTTAATTTTTGGTTTTCTGCGGATAAACGTAACAGGTCTTCTGTTTCATCACACACACGGAGAACGGAGGTAACGATGTCTTTATCCTCTTCTTCTTCAGCGACTGTGGCAGTCGAGAAAGCCACCAGCGACCTTCTAATAAGTCCTGATTGGACTATGAACATCGACATATGCGATTCCATCAATTCTAATCATTGGTACATCAACCAATTCATCTTCCCTTTGACTTTTTTGTTTATTGAATTTACGCTCGATCAATTTTTTTTTTATGCCTGAAACTTCTTTTGATTACTTCCTTTTTCATTTCATCTATACCATGTTGGACGAGGGGACATATATCCTGTTTTTCCGTTTTTTCATGACATATAATAATAATAATAATAACAATAATAATCAATTTTTATCCTCTTTCCTGTTTTTATTTTTTTTTGGTCAGGTATTTTTGTTGGAAATATTCTTTTACATGTGAATATTGGTTTTCAGGATTCCTGTTGTTATTAGTATTATCATTTATTTTTGTTTTTAAGATGCCTCTAATCGCAACAGCGTTCGCTTGATTTCTCTGGGGCTGGTATTAGTAGGCGTTATATTTGAGGTGGATGTAATTTTTTTTCCCTTCCCCTTTCTGAAAGTGACGTTCAGAGCAACTTCTTGGCGAAGGAAGTTTTGTTTGACATCAAGTTAACGTTAGGCTGATGGTTTATGAATTCGATTCTTAATTGGTTAATGTTCTTAATTATTTTATTGGTTGGTGGGTAAGAGGGGAAGATGGCGTACTAGGCTTTATCTAGAAGCGTCTGAAACCATATTTCTCTTTTACCGTTATTTCCATGTTTTTAGCTTCCTCATTCTTTTGCTGAAATCTAGAACTCGTTGTTTAGCCAACTTTGTGTGTGGTCAGGCAGGCGAAAGATGTCATGAAAGCTGTGAAAAGAAGGTTGCAACATAGAAATCCTAAAGTTCAGCTGCTGTCTCTTACGGTAAAATTTCCCTTTCCAATTCCTTCTCAACCCCACTGGAGGTCCAACCCAAAAAACTAAAATAAATTGTGAAAAATCTTACTCTATCGACATGCAATTGATCATCAAATAGATCCCATGTAGCAAGTTTTAGATTCAAGGTGTCTGAACAAATGCTTTGCTGATCTTGTGAAATGTAGCTTATCGAGACAATGGTGAAGAATTGTGGTGATTATGTCCATTTTCAGATAGCCGAGAGAAATATTCTAGGAGAGATGATCAAAATTGTGAAGAAGAAGGTAAACGCTTAAGTTCTTTTATTTGGTTTGTGCATTTTTTTAAGTAATTCTGCATTCAGTTTTATTTCTTGCTAGGAACTTTTTATCGTTAATGGTGTTGATTTTATGGAATCAATCTATATTTCATTCATTACTTAATAGAGATACAAGCCTATATATAACCATAGAGAAATACACTTAAGCAAATAATATCAAATAATATCTCCAGAATAATATCTCCTAAGAATAATATCTCCTAAGAATAATATCTCCTAAGAATAATCTAATTATATTAATACCCTCCCTCAAACTCAAGGTTGAAATCACAAACTTGAGTTTGCTAAGAACTAAGAAAAGAAACAATATATCTAGAATAGAATAAAAAACCCGAAGAACAAACACACAAAGAACTTCTAGGCTAAAACAAACCCACGAAGAGCGAAACGAAGAACTTCTGGGATAGAAACATAGATCCTCGTATAGAGATCTATAACAGAACCTAGGAAGAACGAAACAAGAACTCCGGGGCAAAATGAAAGAGCAAAACTGAAGCAAAGTAGAATCAAATCAGGATGAAATCGTGGTCTAAATTGGGCAGGAGCGTTTCGTCATCAGAATGGAACTGAACGAACTAAACTAAAGCAAGTCAGAATCAAACCGAACAGGAAATCTGGATGAACAGAACGAAAACTGAAGAGAGCTGAGAGGTTGAGTAGATAGAGAACTTTGCGGCGTTCTTCGCAAAAAGAGAAGATGCGTTTCATGACGGCGAGCTTCACAAATGGAGAGCGGACAAAGCCGAACCTGTGCGTCGTCGGCTGTGAGTGGAGCGGAGCGGTGGATCATGGATCTGAACAAAGATTCACCCTCTTCAGGATCGGGAGTCTTCAATCTAAAGAGATTGTCTGGTACGAGTAAAGGGCAGCGGCGGCAGGTCGGTCTGATCTTGAACAGTATGATTCGAAGGCGAAAGATGAAATAAAACACGGATTTGGAAGTCGAAGACACGAACAGAGATGCACGAACAAATCGGTGCTTGCAATGTGCGCACAAGTAGATCTAAGTGAGGACGAATGGAGAGCGGATATGGGTCGAGAGTGCGACGAACTGGGTCGAGAGTGCGACGAACTGTGTGGATGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCAGAAGGAGTAGTGGCGGCGGCAGCAGAATCAGAGACGAGGATTTTGATCTAGGAGGCAGAGCGAATTACTTGGAGACATGATGTGTATTGATTACTGATGGGTATGGCTCTGCCTCCGTCGACGAATCAACGGAGGCAGACGTGCAGGGATGTGACGGCTAGAATACAAGGAGACTTAAAACCCTATAGCTCTGATACCATGTTGATTTTATGGAATCAATCTATATTTCATTCATTACTTAATAGAGATACAAGCCTATATATAACCATAGAGAAATACACTTAAGCAAATAATATCAAATAATATCTCCAGAATAATATCTCCTAAGAATAATATCTCCTAAGAATAATATCTCCTAAGAATAATCTAATTATATTAATAAATGGGTCTCTTATACCAGCCTTCATTATTCTTTTTAAGTGAATGTGTTGTCCTTGGTTTTAGTCACCCTGATTTCTTCCTCCCACCCAGCTAGATCTCACATGAATTTTGACTCTGTTTTGCGTGGAGTACTCTTATGAATACTTTGCATGAATGTTTGAAGGCATTTGTATGATTCAGATGAGTTGGAAAAACCTGTTACTCTTTTCAATCCATAACAACTACAGGAAAGCTTGTCTAGCATTCCTCTCAAGGACTCTTCCTCCTCTGAAAACCACCAACTTGATAGAGTTTCCATGAGCAAGAGTCAAGACTGTAATGTCCCTTGGATAGCAGCAAGCTGTGCAACATTTAACCGTCATGGGTTGGTGTAGTAGTAAAAAAGGAGACATATTCTCAATAACTAACTAAGAGGTCATGGGCTCAATCCATGATGGCCACCTACCTAGGAATTAATTTTCTACGAGTTACCTTTGACACCCAAATGTTGTAGGGTTAGGCGGGTTCTCATGTGAGATTAGTCGAGGTGTGCATAAGCTGACCGGACTCAACATTTTTCCAAAGAAATTGTTGTAGTTGACATGCTGTTAATGTTAATTGATTAATTGATCAAGCTTGAAGAAAGGAGGGTCTAGCTTAGTATAATATACTCAAACTTCTTTGTTTTGTTTGTTTACAAATTATCCAAAGCTCATGCAAATGTTATTCAACTCTAACAAGTCATCAAGTATTTTCTGAGCTGTATGCCTGTAAGTAGGGTACTTCGGTATTGATCTGTCTAACCTTTGGGTTATTTGAATACTGGGTGTATGTGCTTTATCCAGATTTAACCTCAGTGTGCTTCCATGATGCAGGCAGACATGAATGTGAGGGACAAAGTTTTAGTGCTATTAGATTCTTGGCAGGAGGCATTTGGTGGACCTGGAGGGAAGCATCCTCAATATTACTGGGCGTATGATGAATTAAGGGTATGTGTTATAGTTGAGAACTGTCTATTTAATCTTTATGTGATTATCTGACCGTCAGCAATTTGGAAATCTTGTTAACAACAGACATTGTTTGGCTATTTTCATTGACATCCACAATTTATTGAAAAAATTCATGTTCATATTTTACATAATTAAAAACTTCCATTCATAATTTCATATATTTCGAACATTTTTAGAGTTTATTAATTGGATTTTTGTGTATACAGCGTTCTGGAATTGAATTTCCCAGGCGGTCATTAAATGCTGCTCCAATTTTTACACCACCTGTTTCAAATCCAACCTTAAGAATTACACAAGCTGGTTATGGAATGCCTAGCAATTCGTCAAGGAGGCTTGATGAGACAATGGCAACAGAAATTGAAGGCCTAAGTTTGTCAAGCTTGGATTCCATGCGTAATGTTATGGAGCTCTTGAATGACATGCTGCAAGCGATGACTCCTGGAGACTCCCTTGTATGTGCAACGATGTTTTCAGATGTATCACGCTTTTCTCAAGAAAAAAAGTTCTCACCCATCTCATCTCTACTTGTAGGCTGTTAAAGATGAAGTGATTGTAGATCTTGTCAGCCGTTGTCGTGCCAATCAAAAGAAGTTGATGCAGATGTTGACTACAACGGGGTTAGCTCCTTGAAATTGCTGTTGGCTTATGTTTGTAACCATCTATTTTCTTGTGTGTGCTTTCATTGTCTCTCTCTCTCTCGCAAACCCAGTAGGTCAAGACTTCTGTGGCAGATTGAAGCAGGAAATCTGTGATTCAAAACTTCAGAACCATGTGCTTTAGATTTGTTGTGAATGAATTTGAAATTGCTACATTTTGGGTTGTTCCAATTGTTCTGTAGCAATTGGTTGTGTTCTACAAGAGGTCCTGGAATTCTGTTTTTGAGTTTGTGTATGATGAATTTTTTTTCTGTGTTCTGTAGGGATGAAGAAATTCTTGGTCGAGGTCTGGAGCTAAATGATGGCTTGCAAACTTTACTTGCTAACCATGATGCAATTGCTTCTGGTTCTGTGTTGCCGACTCAATCGACAAATCAGAGCCCTCAGATGCCTGAGTCATCTGCTGCCACACAGAAAGCCAGCGAAGTAGGAGGTTCAAGCTTAAGAGATTCTAGTCCTTTATCAAATGCGAATAATACATCTTCGACTGCTTCCGTAGCAAAGAGCCAGATAGTGGAGGAAGACGAAGAGGAGGATGAGTTTGCACAACTAGCTCGAAGGTTAGTCAAGAATGTTGAGCAGGTTTTCATATTCTTCTATAATTTATGACGATAACAGACTTCAGCTATCTGTTCTTGGATGATCTTGAGATGTTGTTGTTAATTATTCAGATAAGATAACGCAGGCAAATAGATAATATTGGATGGTTTGCATTCTGATCTTTTTTTCCTTTTTGGCTGACTGTAAATGTTAAAACCATTCAAATTGCAGGCACTCTAAATCACAGCCTATACCTATTCAAAGCTCTTCTACTGAATCTGTTGATAACTTGGCATTGGTGAGCACAGGCAATACAGTTACTTCATCCACGCCACCATCATCTAATACTTGCACAGCATTAGCTCTGCCAGATCCTCCTGCACCAGTCAAGACTTCAAAAGAGCAAGATATGATTGACCTCTTGAGTATTACTTTATCAACATCATCAACCTCGCCTCATACTCCTCTCACTCCTCCTGCATCAAGCCAAAATACACATCAGGTCCCTGTGTCAGCGTCAAATACACAGGGATATCATCCTCACCATTCTGCAAGCCAAGGTCAGGTACCATATAACAGTTACGTTGTACCGTGGGCTCAACCTGGACCCCAAGTTCAGTTGCAATCACAAACCAAAACACAATCACCATCACCATCACCATCGCAGCAACAATTTCAAAGTCAGCCTCAGCCACATCCCCAACAACAATATCGGCCTCAGCCTCAGCCTCAGCCTCAGCGGCCACAACAACAATTTCAACCTCGGCCACAACAACAACAATATCAGCCACAGCAACAATTTCAATCTCAGCCCCAGTCACACCCGCAGCAGCAATATCATCCACAGTATGCTCAATATTCTTCAGGCTATTACCCTCCCCCACCTTGGGCAGGTTCTTCTCTTAATGCCAACCACCAAAGTAACGTCTCTGTTTCGAATATGGGTTATCTTCGTGGGAAGGAACCTGCACTGTCTACCTCATCATTGCCTGCTAGACCTTTGCAGCATCTTAATTCATTTCCTTCAAGAGGAAATAATGAGTTAGGTACGCATGGAGGAGGAGACTCATGGGCAGCAGGTGCCCCTAGGAACTCAACGCCTTCAACAACACAAAAGCCATTCATTCCATCATACAGACTGTTTGAGGATCTAAATGTTTTTGGCAGTACAGATCCAAGATTGAAGGTGACTAGCAGTAACGCAACCTCTAGCTTAGCCGGAAGTTCTGGTCAAAGTATGGTGGGTGGGAGAAAGTGAAAGTGAAAGTGAAAATAGCCTCCTCATTTATGTAGCTGAAGAAATTTCCCGTGTCAATATAAAAGTATCTTTTTCATCTTTGTGACGTATTTAAAACAGATTGGCAGAACATAGATTTCATGTGATCATTGATTATGGAATTGAAGAAAAAATGTGAGTTGTAAATTTTTGTTCTATTCGTAAATGGTCTCTACTTTGTCGTGCTTTTCGGGCAGTGCATGGAAGATGTAAAAACCCAACAGGACAACAATCTTTTGCTGATCCTGACATTCGACCATGGAGGTAATCTCTCTCTCTCTCTCTAGGTTTTCACTTTCTTCTACTTTGCTCTGTATCATATATATACTCAGTTTCAAGATCAAAAAATTAATGTCCAATTGATTAGCTTTCATGGTTGTATAATAATTACATTTTTACTACTTTTTCTTAATTTTTTCAACAAT

Coding sequence (CDS)

ATGAATGTGAGGGACAAAGTTTTAGTGCTATTAGATTCTTGGCAGGAGGCATTTGGTGGACCTGGAGGGAAGCATCCTCAATATTACTGGGCGTATGATGAATTAAGGCGTTCTGGAATTGAATTTCCCAGGCGGTCATTAAATGCTGCTCCAATTTTTACACCACCTGTTTCAAATCCAACCTTAAGAATTACACAAGCTGGTTATGGAATGCCTAGCAATTCGTCAAGGAGGCTTGATGAGACAATGGCAACAGAAATTGAAGGCCTAAGTTTGTCAAGCTTGGATTCCATGCGTAATGTTATGGAGCTCTTGAATGACATGCTGCAAGCGATGACTCCTGGAGACTCCCTTGCTGTTAAAGATGAAGTGATTGTAGATCTTGTCAGCCGTTGTCGTGCCAATCAAAAGAAGTTGATGCAGATGTTGACTACAACGGGGTTAGCTCCTTGA

Protein sequence

MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNPTLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAVKDEVIVDLVSRCRANQKKLMQMLTTTGLAP
Homology
[Close]
BLAST of Cucsat.G12179.T5 vs. ExPASy Swiss-Prot
Match: O80910 (TOM1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=TOL6 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.5e-56
Identity = 115/189 (60.85%), Postives = 132/189 (69.84%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           M VRDK+LV++DSWQ+AFGGP GK+PQYYWAYDELRRSG+EFPRRS +A+PI TPPVS+P
Sbjct: 102 MQVRDKILVMVDSWQQAFGGPEGKYPQYYWAYDELRRSGVEFPRRSPDASPIITPPVSHP 161

Query: 61  TLR------------------------------------------ITQAGYGMPSNSSRR 120
            LR                                          I Q GYGMPS SSRR
Sbjct: 162 PLRQPQGGYGVPPAGYGVHQAGYGVPQAGYGIPQAGYGVPQAGYGIPQVGYGMPSGSSRR 221

Query: 121 LDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAVKDEVIVDLVSRCRANQKK 148
           LDE MATE+EGLSLSS++SMR+VM+LL DMLQA+ P D  AVKDEVIVDLV RCR+NQKK
Sbjct: 222 LDEAMATEVEGLSLSSIESMRDVMDLLGDMLQAVDPSDREAVKDEVIVDLVERCRSNQKK 281

[Close]
BLAST of Cucsat.G12179.T5 vs. ExPASy Swiss-Prot
Match: F4KAU9 (TOM1-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=TOL7 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.8e-41
Identity = 86/144 (59.72%), Postives = 107/144 (74.31%), Query Frame = 0 

Query: 3   VRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNPTL 62
           VR+K+L+LLD+W EAF G   KHP Y WAY EL+R G++FP+RS  A  +  PP      
Sbjct: 118 VRNKLLILLDTWNEAFSGVACKHPHYNWAYQELKRCGVKFPQRSKEAPLMLEPPPPVTQS 177

Query: 63  RITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAVKD 122
             + +   M   S RRLDETMATEIE LSLSSL+SMRNVM+L+NDM+QA+ P D  A+KD
Sbjct: 178 SSSSSMNLMSIGSFRRLDETMATEIESLSLSSLESMRNVMDLVNDMVQAVNPSDKSALKD 237

Query: 123 EVIVDLVSRCRANQKKLMQMLTTT 147
           E+IVDLV +CR+NQKKL+QMLTTT
Sbjct: 238 ELIVDLVEQCRSNQKKLIQMLTTT 261

[Close]
BLAST of Cucsat.G12179.T5 vs. ExPASy Swiss-Prot
Match: Q9LPL6 (TOM1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOL3 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.2e-27
Identity = 63/147 (42.86%), Postives = 96/147 (65.31%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           + VR+K+L LLD+WQEAFGG GG+ PQYY AY+ELR +GIEFP R+ ++ P FTPP + P
Sbjct: 99  LTVREKILSLLDTWQEAFGGSGGRFPQYYNAYNELRSAGIEFPPRTESSVPFFTPPQTQP 158

Query: 61  TL-RITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLA 120
            + + T +       +S + D+  A     LS+  + S +  +++L DML A+ P     
Sbjct: 159 IVAQATASDEDAAIQASLQSDDASA-----LSMEEIQSAQGSVDVLTDMLGALDPSHPEG 218

Query: 121 VKDEVIVDLVSRCRANQKKLMQMLTTT 147
           +K+E+IVDLV +CR  Q+++M ++ TT
Sbjct: 219 LKEELIVDLVEQCRTYQRRVMALVNTT 240

[Close]
BLAST of Cucsat.G12179.T5 vs. ExPASy Swiss-Prot
Match: Q8L860 (TOM1-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=TOL9 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.2e-27
Identity = 61/151 (40.40%), Postives = 96/151 (63.58%), Query Frame = 0 

Query: 2   NVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSN-- 61
           +V++K+LVL+D+WQEAFGGP  ++PQYY  Y EL R+G  FP+RS  +AP+FTPP +   
Sbjct: 97  HVKEKILVLIDTWQEAFGGPRARYPQYYAGYQELLRAGAVFPQRSERSAPVFTPPQTQPL 156

Query: 62  ----PTLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPG 121
               P LR    G  +P  S+         E   LSLS + + + +M++L +ML A+ PG
Sbjct: 157 TSYPPNLRNAGPGNDVPEPSAE-------PEFPTLSLSEIQNAKGIMDVLAEMLSALEPG 216

Query: 122 DSLAVKDEVIVDLVSRCRANQKKLMQMLTTT 147
           +   +K EV+VDLV +CR  +++++ ++ +T
Sbjct: 217 NKEDLKQEVMVDLVEQCRTYKQRVVHLVNST 240

[Close]
BLAST of Cucsat.G12179.T5 vs. ExPASy Swiss-Prot
Match: Q6NQK0 (TOM1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=TOL4 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.7e-26
Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           +NVR+K+L LLD+WQEAFGG GG++PQYY AY++LR +GIEFP R+ ++   FTPP +  
Sbjct: 99  LNVREKILTLLDTWQEAFGGRGGRYPQYYNAYNDLRSAGIEFPPRTESSLSFFTPPQT-- 158

Query: 61  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 120
                      P   +         +   LSL  + S    +++L DML A  PG+  ++
Sbjct: 159 ----------QPDEDAAIQASLQGDDASSLSLEEIQSAEGSVDVLMDMLGAHDPGNPESL 218

Query: 121 KDEVIVDLVSRCRANQKKLMQMLTTT 147
           K+EVIVDLV +CR  Q+++M ++ TT
Sbjct: 219 KEEVIVDLVEQCRTYQRRVMTLVNTT 232

[Close]
BLAST of Cucsat.G12179.T5 vs. NCBI nr
Match: XP_031739491.1 (TOM1-like protein 6 isoform X2 [Cucumis sativus])

HSP 1 Score: 294 bits (753), Expect = 7.85e-94
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP
Sbjct: 57  MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 116

Query: 61  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 120
           TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV
Sbjct: 117 TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 176

Query: 121 KDEVIVDLVSRCRANQKKLMQMLTTTG 147
           KDEVIVDLVSRCRANQKKLMQMLTTTG
Sbjct: 177 KDEVIVDLVSRCRANQKKLMQMLTTTG 203

[Close]
BLAST of Cucsat.G12179.T5 vs. NCBI nr
Match: KAA0044214.1 (TOM1-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 292 bits (747), Expect = 1.55e-93
Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFP+RSLNAAPIFTPPVSNP
Sbjct: 103 MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPKRSLNAAPIFTPPVSNP 162

Query: 61  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 120
           TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV
Sbjct: 163 TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 222

Query: 121 KDEVIVDLVSRCRANQKKLMQMLTTTG 147
           +DEVIVDLVSRCRANQKKLMQMLTTTG
Sbjct: 223 RDEVIVDLVSRCRANQKKLMQMLTTTG 249

[Close]
BLAST of Cucsat.G12179.T5 vs. NCBI nr
Match: XP_004137684.1 (TOM1-like protein 6 isoform X1 [Cucumis sativus] >KGN58706.1 hypothetical protein Csa_002173 [Cucumis sativus])

HSP 1 Score: 294 bits (753), Expect = 2.31e-93
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP
Sbjct: 103 MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 162

Query: 61  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 120
           TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV
Sbjct: 163 TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 222

Query: 121 KDEVIVDLVSRCRANQKKLMQMLTTTG 147
           KDEVIVDLVSRCRANQKKLMQMLTTTG
Sbjct: 223 KDEVIVDLVSRCRANQKKLMQMLTTTG 249

[Close]
BLAST of Cucsat.G12179.T5 vs. NCBI nr
Match: XP_008442341.1 (PREDICTED: TOM1-like protein 2 [Cucumis melo] >TYK24921.1 TOM1-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 292 bits (747), Expect = 1.80e-92
Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFP+RSLNAAPIFTPPVSNP
Sbjct: 103 MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPKRSLNAAPIFTPPVSNP 162

Query: 61  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 120
           TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV
Sbjct: 163 TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 222

Query: 121 KDEVIVDLVSRCRANQKKLMQMLTTTG 147
           +DEVIVDLVSRCRANQKKLMQMLTTTG
Sbjct: 223 RDEVIVDLVSRCRANQKKLMQMLTTTG 249

[Close]
BLAST of Cucsat.G12179.T5 vs. NCBI nr
Match: XP_038903948.1 (TOM1-like protein 6 isoform X3 [Benincasa hispida])

HSP 1 Score: 287 bits (735), Expect = 2.42e-91
Identity = 142/147 (96.60%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           MNVR+K+LVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFP+RSL+AAPIFTPPVSNP
Sbjct: 11  MNVRNKILVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPKRSLDAAPIFTPPVSNP 70

Query: 61  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 120
           TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQA+TPGDSLAV
Sbjct: 71  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAVTPGDSLAV 130

Query: 121 KDEVIVDLVSRCRANQKKLMQMLTTTG 147
           KDEVIVDLVSRCRANQKKLMQMLTTTG
Sbjct: 131 KDEVIVDLVSRCRANQKKLMQMLTTTG 157

[Close]
BLAST of Cucsat.G12179.T5 vs. ExPASy TrEMBL
Match: A0A5A7TLZ9 (TOM1-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005740 PE=3 SV=1)

HSP 1 Score: 292 bits (747), Expect = 7.48e-94
Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFP+RSLNAAPIFTPPVSNP
Sbjct: 103 MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPKRSLNAAPIFTPPVSNP 162

Query: 61  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 120
           TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV
Sbjct: 163 TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 222

Query: 121 KDEVIVDLVSRCRANQKKLMQMLTTTG 147
           +DEVIVDLVSRCRANQKKLMQMLTTTG
Sbjct: 223 RDEVIVDLVSRCRANQKKLMQMLTTTG 249

[Close]
BLAST of Cucsat.G12179.T5 vs. ExPASy TrEMBL
Match: A0A0A0LF51 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730700 PE=3 SV=1)

HSP 1 Score: 294 bits (753), Expect = 1.12e-93
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP
Sbjct: 103 MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 162

Query: 61  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 120
           TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV
Sbjct: 163 TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 222

Query: 121 KDEVIVDLVSRCRANQKKLMQMLTTTG 147
           KDEVIVDLVSRCRANQKKLMQMLTTTG
Sbjct: 223 KDEVIVDLVSRCRANQKKLMQMLTTTG 249

[Close]
BLAST of Cucsat.G12179.T5 vs. ExPASy TrEMBL
Match: A0A5D3DMT3 (TOM1-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00350 PE=3 SV=1)

HSP 1 Score: 292 bits (747), Expect = 8.72e-93
Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFP+RSLNAAPIFTPPVSNP
Sbjct: 103 MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPKRSLNAAPIFTPPVSNP 162

Query: 61  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 120
           TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV
Sbjct: 163 TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 222

Query: 121 KDEVIVDLVSRCRANQKKLMQMLTTTG 147
           +DEVIVDLVSRCRANQKKLMQMLTTTG
Sbjct: 223 RDEVIVDLVSRCRANQKKLMQMLTTTG 249

[Close]
BLAST of Cucsat.G12179.T5 vs. ExPASy TrEMBL
Match: A0A1S3B683 (TOM1-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103486241 PE=3 SV=1)

HSP 1 Score: 292 bits (747), Expect = 8.72e-93
Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFP+RSLNAAPIFTPPVSNP
Sbjct: 103 MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPKRSLNAAPIFTPPVSNP 162

Query: 61  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 120
           TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV
Sbjct: 163 TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 222

Query: 121 KDEVIVDLVSRCRANQKKLMQMLTTTG 147
           +DEVIVDLVSRCRANQKKLMQMLTTTG
Sbjct: 223 RDEVIVDLVSRCRANQKKLMQMLTTTG 249

[Close]
BLAST of Cucsat.G12179.T5 vs. ExPASy TrEMBL
Match: A0A6J1DSN9 (TOM1-like protein 6 OS=Momordica charantia OX=3673 GN=LOC111024025 PE=3 SV=1)

HSP 1 Score: 276 bits (707), Expect = 3.36e-87
Identity = 136/147 (92.52%), Postives = 140/147 (95.24%), Query Frame = 0 

Query: 1   MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNP 60
           MNVRDK+LVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFP+RS N  PIFTPPVSNP
Sbjct: 102 MNVRDKILVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPKRSSNGVPIFTPPVSNP 161

Query: 61  TLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAV 120
             R TQAG+GMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQA+ PGDSLAV
Sbjct: 162 NTRTTQAGFGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAVNPGDSLAV 221

Query: 121 KDEVIVDLVSRCRANQKKLMQMLTTTG 147
           KDEVIVDLVSRCRANQKKLMQMLTTTG
Sbjct: 222 KDEVIVDLVSRCRANQKKLMQMLTTTG 248

The following BLAST results are available for this feature:
BLAST of Cucsat.G12179.T5 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O809102.5e-5660.85TOM1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=TOL6 PE=1 SV=1[more]
F4KAU93.8e-4159.72TOM1-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=TOL7 PE=2 SV=1[more]
Q9LPL63.2e-2742.86TOM1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOL3 PE=1 SV=1[more]
Q8L8609.2e-2740.40TOM1-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=TOL9 PE=1 SV=1[more]
Q6NQK02.7e-2641.78TOM1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=TOL4 PE=1 SV=1[more]
BLAST of Cucsat.G12179.T5 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031739491.17.85e-94100.00TOM1-like protein 6 isoform X2 [Cucumis sativus][more]
KAA0044214.11.55e-9398.64TOM1-like protein 2 [Cucumis melo var. makuwa][more]
XP_004137684.12.31e-93100.00TOM1-like protein 6 isoform X1 [Cucumis sativus] >KGN58706.1 hypothetical protei... [more]
XP_008442341.11.80e-9298.64PREDICTED: TOM1-like protein 2 [Cucumis melo] >TYK24921.1 TOM1-like protein 2 [C... [more]
XP_038903948.12.42e-9196.60TOM1-like protein 6 isoform X3 [Benincasa hispida][more]
BLAST of Cucsat.G12179.T5 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TLZ97.48e-9498.64TOM1-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G... [more]
A0A0A0LF511.12e-93100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730700 PE=3 SV=1[more]
A0A5D3DMT38.72e-9398.64TOM1-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G... [more]
A0A1S3B6838.72e-9398.64TOM1-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103486241 PE=3 SV=1[more]
A0A6J1DSN93.36e-8792.52TOM1-like protein 6 OS=Momordica charantia OX=3673 GN=LOC111024025 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 1..60
e-value: 6.0E-9
score: 37.5
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 2..43
IPR038425GAT domain superfamilyGENE3D1.20.58.160coord: 85..148
e-value: 2.5E-11
score: 45.4
IPR004152GAT domainPFAMPF03127GATcoord: 99..146
e-value: 6.2E-9
score: 36.0
IPR004152GAT domainPROSITEPS50909GATcoord: 86..150
score: 10.643718
IPR044836TOM1-like protein, plantPANTHERPTHR45898TOM1-LIKE PROTEINcoord: 1..147
NoneNo IPR availablePANTHERPTHR45898:SF2TOM1-LIKE PROTEIN 6coord: 1..147
NoneNo IPR availableSUPERFAMILY89009GAT-like domaincoord: 41..147
IPR002014VHS domainPROSITEPS50179VHScoord: 1..43
score: 13.880356

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G12179Cucsat.G12179gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G12179.T5.E1Cucsat.G12179.T5.E1exon
Cucsat.G12179.T5.E2Cucsat.G12179.T5.E2exon
Cucsat.G12179.T5.E3Cucsat.G12179.T5.E3exon
Cucsat.G12179.T5.E4Cucsat.G12179.T5.E4exon
Cucsat.G12179.T5.E5Cucsat.G12179.T5.E5exon
Cucsat.G12179.T5.E6Cucsat.G12179.T5.E6exon
Cucsat.G12179.T5.E7Cucsat.G12179.T5.E7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G12179.T5.C3Cucsat.G12179.T5.C3CDS
Cucsat.G12179.T5.C2Cucsat.G12179.T5.C2CDS
Cucsat.G12179.T5.C1Cucsat.G12179.T5.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G12179.T5Cucsat.G12179.T5-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
cellular_component GO:0016020 membrane
molecular_function GO:0035091 phosphatidylinositol binding
molecular_function GO:0043130 ubiquitin binding