Cucsat.G12106.T10 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G12106.T10
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionWD repeat-containing protein 6
Locationctg1837: 416659 .. 423780 (-)
RNA-Seq ExpressionCucsat.G12106.T10
SyntenyCucsat.G12106.T10
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTTGAGAATTTTAGGTTTGACAATATTTTGCTAGTGATTGCGTTCGGCGCATGCATACAGCATACCTTCAAGCTCAAACCTTCCGGCTCAAATTTGCCGTAACTTCCCCACCATTTCACCTGAGACGAATTCTACGTCTACCTAAATCTCCATCTCCGACACTAATATCACCAAGACGTAGCTTCCATGGCGGGGAAGGAGGAGCAGAGCGACTGGCACTTGCACAGCGGACAGTACCTCGGAGAAATCTCAGCTTTATGCTTCCTCCATTTACCTCCTCAAATTTCCTCTTTCCCAATTCTTCTCGCAGGTACTTCACGTTCTTTCTATTCGTATTTCTATTGCATTCCTCCATCTTTCCTGACTTCATAACCGACTGCTATTTACCTCCATCTTACTCGTGGAAAAACACAGGGTCCGGTTCCGAGGTAATGGTGTATAACTTGGAATCTGGAAAGATGTTAGAATCGTTTCGGGTATTTGAAGGCATTCGCGTTCATGGGATTTCATCTATCTCCTTGAATTTCAATGAGGCCTCGTCTTTTACTAAGCTTGATTTTATCCTCGTTGTTTTTGGTGAAAAACGAGTCAAGCTATATCGTATAAGCGTTGAAGTGATTGCTGAAGTATGTGTGAATATGGTTCTGTTATGTTCTTTGCCGAGGTTCAATCATTGGGTCTTGGATGCTTGCTTCTTGAAGGTACCAATTCAGTTCAGAATCCTTCACTGAAGTGGCTTAACTACTATTGACTTTAAATTTTGATCGGGAGTAGAGCCGTGACTCTTCTTCCTTGGCAGGTAGTGACAACTGTGGTTATATTGCTATTGGATGCGGCGATAACTCTGTTCATGTGTGGGATACTTGTGAATCTAGAATGATTCTTAAAGTTGAATCGCCAGGTTAGAGCTTCATGCCAATTTTTCCCTTTTCCTTTTTTTACAATCAAGATGACTCAAGTTAGTGATTCGTTCTGTACTGCTGTTTTATTTCTCTTAATTCAGAGTACCGAGTGTTAACTTTTTGTCTTCGTTCCATTTAACCTTTTCTGCTTCTGATTCTGTTTGTATTTATGTACACTAGAGAGATGCCTCTTGTACTCGATGAGGTTGTGGGGTGATGATATTGATACTATTCGAGTAGCATCTGGTACTATTTTTAACGAGGTGCCTAATCTTTCTTTGTATTGGAGCTCGTGAATTCTATGTTTTAAATTCTTCTTCATATCTGTTTCTAATTCCAGAATCCCTTGTTTATTCATCTGATTTCTTTATGTAGATTTTGAATCTTGAGCCTTTTTCACCACTTGTAGCTTCAGTACATCAAAACTGTAGGCTACTGCTTTGACTGATTTTCCCCCTATTATGCCTACAGATTAAAATTTGTTAAAAAGGCTTGTGGATTCCTAATATTCCTTTTGTCGTTGGTCCCATTTCAAATTCTAACATTTTATTGATTATCACTTCTTGCAGATAATTGTTTGGGAAGTGGTTCCTTCAAAAGGTAATAAGAAAAATCTCGATGAAAAGAGTCACAAGACTCATGACATTCAATTTCACCATATGCAATATGAGGCAGTTCATAAAAGTAGGCTTATTGCACATGAGGGTTCAATCTTTCGCATTGCTTGGTCCTCTGATGGATTCAAACTGGTGTCTGTTTCTGATGATCGTAGGTGATTGGTGACTTTGTTACTTGATTTTCACCAAATCCGGTCTTAACAAACTATATTCTAATTCATGTTAATGTCCTTTTTGGTTTAACTTCAGTGCTCGCATCTGGAGTCTAAATGCAAAAGGGAGTGATGCTGATAACCCTGGGGAGGTCATTGTGCTGTTTGGTCATAATGCTAGAGTTTGGGACTGCTGTATCTATGATTCTGTGAGCCTCATTCCATGCTTTTATTTTGGGTTGCATTCTCAGTAGTCTGTGAACCCTGTCATCTCATCTCCGTTTATGTGCTAGTACTGGAAACATGAAACAGTATCTTTTCATTTCCCTATAATTTTTTGATACCTCAAAGTTTTTCTAGTAGCGAATCCAGAATAGAATATATTGAATGGTAGGGTCATTGTTCATAAATGTACGAATTGTGCTTCTCCTTATTTAAAATTTGGATCCACCATCTTACCGCCCTCCCTTTGGGTTGATAATAATTGCAACTGTATATTTTTATCAAAAAAGAAGACCATGATTTTCATTTATTTAGGGAAAAACAACGAAATATAGACCTGAAAACTAAAATTTCATTTGATACCTTTTGGATTTAAAAAGTTGTATATGTTTTCTCACTACTTCTTGACCATGGTCTTTTTACCTTTCTTAGGTATCATTTAAATTCTTAGCCAAACTACAAAAAGCAAAAGCAACTTCTTTAACAATTAACCTTTTTTTAGTTTAGAAAAAGAGCCCACAAAAGAGCGAGGAGCCCTGACTAACTACAAAATGGGCACCAATTCAACAAAATCATTTCAAGATCTTCATTCTTTTTGTTGGCTGTTTGTCTGTTTTTTTTATTTCATAATAATAATAATAACAACAACAATAACGATTATTTTGGTATTCCGTCTTTCTTTCATTTTTTGTTAAAGAAAACTTGATTTCTTACAAAATATTCTTTTTTCCATCATTTATATATAGCTCTATTTTGAGTTCTGTTTAGCTATAACAAACAAGAAGCCTGGTTGTATTTCCTTGTTTGTTCTTGCATATGCCCTGAATTTTCTTATGAGTTATCCTTGTAGTTGATAATCACTGCCAGTGAAGATTGTACATGCCGTGCATGGGGAATAGACGGCCAACAACTGGAGATGATAAAGGAGCATATGTAAGTTGTGAAAACTTTTCCGTTTTGCAAGAGTTTTTTATAATTTGTTTAAGTGTACTCTATGTGTGCCCATTACTTTATATTGTTGATCAAATACTTGTAAATATTTTTGTTTGATTCTCCTCTAATAATGGATTTCCATTTTAGTTGCTTGCCCTCTCCCTCTCTCTCTGTGGTTGGGAATGGTGAAGTACTTCGATGCTGTTGGAAAGGGAGTTTATAATTTGAAGGACTATAAGAAATATAGCTTCTGGATTTGGGTTAATGTATTTATTCATTTATTTCATACTAGTTTTTGTTATAGTTTTTGTCTCTTTAGTAGTTTTGTGTATTATAGTTATTGTGTTTTTAGTAGTTCCATGTGAAACCAATTCATAGTTGCTCAATTTATTTTCATCAAGGATATATAGATCATGAAGTTGATTTATTTATGGGGAAAAAGTCAAGTGGTAACCTTAAACTTTATAGGTTGAGTCTGTTAAAATTCTAAACTAGCAACAGTATCAATTTAGATCCTTTGTTAGGATTTCATTTTAAAACCATTAATGTATAATTTTCACGTGTAAACAATTAAGTTGGTCCTTTTCTAGGTTTCTGTTTTGCACAACTTATATAAATACATGAGCCAAGTGGGCAGTAGTGAGTAGTAATGACTTGCATTAATATGATCGTTTTTTTTATTTTGTCTTTTTCCTCTAACGTTCTCTACTTATTTTGGAAGAACTACATGGTATCTTTCTTTTGCTACTTTCGTAGGATTTTGAGATAATAATAATTTTGTTTAAGCAATTATGATTCAATTTTACTTGTAACCAAGTAAAAACTAACAATAGCACTGAATTACTGGCAGAGAATCTAGGGTTTGAATTGATACAATTCATTAGTTTTGAGGTTTACACTGATTCAACATGTAAAGAAGGATATAAGTTGATTTTTCCATATTTAAGTGTTAGTTTAGGTATGGAGGATCATTGACATATTTACCACTCACTTTGTTGATTAGTTATACATATAGTCATATATTGTATAATGATCCAGATATCTTTGCCATGACAAACTTTATGTTTTCTATTTAAATTAATTTCAGAGGGAGAGGCGTATGGAGATGTTTGTATGATCCAATTTCCAATCTTCTTATTACTGCTGGATTTGATTCCTCTATTAAAGTGCATCGGCTCAACACTTCTTTATCTGGGACCTCCAATGAACCTGCTGAAAACGCCGACCGTAGTATGAAAAGAGAGGTTTTCACTACTTGTATTCCAGATTCATTGGATCATAACAGACATATGGACAGGTGAAGTTCGTTTTCAACATTTCTGGTAGATTCTTAAATCACTAATTGACCCCAGAAGCTTAGTTGATGGGTGAAGATGAATTTTATTATATTTCATCCAACACTCCCTGTCACTTGTGGACTCGAAATATGAAGAAAACCCATCAATTGGAAATCAATTTTAATTGGGGAGGAAATAACTCCATAGAACCTCCCTAGACCATCTTTTCTGATACCATCTTAAATCACTGATTGACCTGAAAGGTTAAACCGATGGGTGAAGGGGAATTTAATTATATGTAATCTAACATGGATATATACTCGTCTTTGAATTTTACTTTATTTCCCTGCTTTTATTTTCTGAAGGTGGGAGTGGCATCACCATTCAATATAATTTTACTCTCATTTTGCAGTAAAAGTGAGTATGTGCGCTGCTTACGGTTTTCGTCAGAACGTACAATTTATGTTGCCACAAACCATGGTTATCTTTACCATGCTACATTGTCTGATTCCATGGGTGTCATGTGGACCAAACTCATTCATGTTGGTGAAGAGGTTCAAATTATTTGCATGGATTTGCTAGCCTGTAGTCCGTTTGAAGTTTCAGGAGGAGCTGAGGATTGGATTGCTCTTGGAGACAGTCAGGGAAGAATGACAGTTTTAAAAGTTCTTCACGATTCAAATGCACATACACCTGACATCTCCTTTACCTGGTCAGCTGAAAAGGAGAGACAGCTTTTAGGAACCTTTTGGTGCAAGTCACTTGGATTCAGGTTAACACCATTTCTTATTTTCAACTCTGATAATGATGGAACCACCAGCTGAAATCTTTATATAAGCCTGTGGTTGGACATGGATTCATGTTTGATAGAACCTTCTTACCAAAAGAAGATAGGCCCCAAGTCACTAGAGTGTTTGTCGTAAGCATGGTAAGATAGGAGGGGCAAATTCAGGTAAGGGAAATAAGTAGTTGGTGTGTGACCCAAAGGTTAGTTGAGGTTCTTGGGGAAGGGGTATGTGTACCATTTGGGGTGTGTGGTGAGGGATATCTTTTTGCTGAATCATTGTAGTTGTTCTCTTTATGAGATCTTGGAGAGGAAGGGGAGCTCTCAAACCCTCCCTCTTTTTGTTGATAAATAAATTGAGGCCAAGGCTATCAGAAAACAGTGTGATGTAATAGGATTGGGATAATTTGGAAATTCAAATTAATCTTGGTTAATCCTTGATTAGTTACATTTTAGTTTCCTAATGAGTTTTTAGTTATCTTTTTAGCATCCAATTTTACATTTGCTTCTTTATAAACAGAGGATTCTTCTCTTGTAAACTTCTTTTAATTGATAATAAAGACTTTGATTTGGAGCATTTGGAAAGAAAGGAATAGCAGAATTTTTGAAGATAGATTTAATTCTTTTGATTCTTTTTGGACTGTGGTTCAACACACAGCCTCTTGGTGGAGTACGAATTACACCAAACACTTTTGTAATTATAGCCTTTCTATGATATTCAACAATTGGAAGGCCATTATGTCTTAGTTTCCTAGCTTCTTCCGGGGAGGGCCCTCTTGTCCCTCGCCCTTAGGATGTTCTGTTTTGTTATATGAATATACTTGTCTCCTATCAAAAAAAAGATAATAAAGACTTTGATTTGATTCTTAGAGAAAGTCATCCTTTAATCTTCTAGACTACATCACAATGTTTTATAGAACCTTGAATCCATTATTTCATTTAAAGCTCTGCCAGACATGAGATCCTCATGAGACTGATTGATGGTCTGAAAGAAGCATTCTAAGGAAATTAAATTGTGCAAGGTTTTCTTTTTGAAGTCCGAAGATCATTCCTTAATTTCTTTAAAAATTGGGGCAATATTCACCACTTAGGACCTTTGACATGAACGGGAGAGAGTGTTTAAATTTAATTATCATTTGCTAGATATAAATTATTTCTATTTATTTTTTAGGTACATCTTTACAGCTGATCCTAGAGGTGCATTGAAACTCTGGAGATTAGCTGATCACGTATCAGCTTCTCAGAATGGCAAAAACTATAATCCATCTCTTGTGGCAGAATATATATCATGCTTTGGCTTAAGGATTATGTGTTTGGATGTGTCATGTGAGGAAGAGGTACTTCCCTTGTTCTAAACTTTATGTAATTGCAGAATTACTTCCATTAATGTTTTCATCTTCTAGAATTGATCTCAAGATCAATGCATAAACTTTGTTAAAACAGCCCCAATTGTGGTATTTTGACCCCATTGGCTTGGTGTAACATGTCCAAATGTAATCGACTAGGTTTGAACCATCCATCTTTGGTGGCTCTGCTTTCCCTCTTGTTGTTTTTTGTATGGACTTTCTGTGGTTCTCAAATTCTAGTTTATGTGCAGTGACGGTGGAAGTTGTTTTGATTTTTTTTTAAAGGAAAAAAAAAGTCTTCTAGAGACAGGCTGTGTATTTAGGAAAGCTGTTTTTGTTGCTATTTTATAGAATATTTGGTTAGGAAGGAGTTGGAGAATCTTTTTGGGTATTTGAAGGTCTGGGAGGAATCTGGGGGGTTGACACATTTTAATGCCTGGGTACACTTGCACAACTCTTTTACAATTTATTTAATCTTTTTTTTCTTGTCTAATCACCAACAAGTAGGGATGTAATTAGGACCTTTTCAGTTTCTTAATTTTTTTTTGTTGAGAATTCCACGTTGAAAAAAATCGAGGCACCTCACTCTTTATAGGGCAGATGAGTTGTCCTCTCATTGTCGATTGGTGTTGAGATGAAACCCCACGTTATCTAATGTGGTATCCGAGCACGTGCTCCAAGAGGTCCAATCTTCAAACTGCTGCAGTATCGTTTACTCCTCAATTAATGTTAATTTCCACTTGTTGGGTCTTTTACTACGATGTTCAAGCCCACAAGCAAGGGGGAGCTCTGGATGACATACTACTAAATATACCTTCACGTACGAGCAAATTTATTTTCATCTTTTGGGATCTTTTTTTAGTTTTATTATCTTTAATGGCTGTAC

Coding sequence (CDS)

ATGGCGGGGAAGGAGGAGCAGAGCGACTGGCACTTGCACAGCGGACAGTACCTCGGAGAAATCTCAGCTTTATGCTTCCTCCATTTACCTCCTCAAATTTCCTCTTTCCCAATTCTTCTCGCAGGGTCCGGTTCCGAGGTAATGGTGTATAACTTGGAATCTGGAAAGATGTTAGAATCGTTTCGGGTATTTGAAGGCATTCGCGTTCATGGGATTTCATCTATCTCCTTGAATTTCAATGAGGCCTCGTCTTTTACTAAGCTTGATTTTATCCTCGTTGTTTTTGGTGAAAAACGAGTCAAGCTATATCGTATAAGCGTTGAAGTGATTGCTGAAGTATGTGTGAATATGGTTCTGTTATGTTCTTTGCCGAGGTTCAATCATTGGGTCTTGGATGCTTGCTTCTTGAAGAGCCGTGACTCTTCTTCCTTGGCAGGTAGTGACAACTGTGGTTATATTGCTATTGGATGCGGCGATAACTCTGTTCATGTGTGGGATACTTGTGAATCTAGAATGATTCTTAAAGTTGAATCGCCAGAGAGATGCCTCTTGTACTCGATGAGGTTGTGGGGTGATGATATTGATACTATTCGAGTAGCATCTGGTACTATTTTTAACGAGATTTTGAATCTTGAGCCTTTTTCACCACTTGTAGCTTCAGTACATCAAAACTATAATTGTTTGGGAAGTGGTTCCTTCAAAAGGTAA

Protein sequence

MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMVYNLESGKMLESFRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLLCSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPERCLLYSMRLWGDDIDTIRVASGTIFNEILNLEPFSPLVASVHQNYNCLGSGSFKR
Homology
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BLAST of Cucsat.G12106.T10 vs. NCBI nr
Match: XP_011651754.1 (uncharacterized protein LOC101207681 isoform X1 [Cucumis sativus] >KAE8650914.1 hypothetical protein Csa_002230 [Cucumis sativus])

HSP 1 Score: 421 bits (1081), Expect = 1.81e-134
Identity = 207/209 (99.04%), Postives = 208/209 (99.52%), Query Frame = 0 

Query: 1   MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMVYNLESGKMLES 60
           MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVM YNLESGKMLES
Sbjct: 1   MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMAYNLESGKMLES 60

Query: 61  FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL 120
           FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL
Sbjct: 61  FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL 120

Query: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180
           CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE
Sbjct: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180

Query: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEIL 209
           RCLLYSMRLWGDDIDTIRVASGTIFNEI+
Sbjct: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEII 209

[Close]
BLAST of Cucsat.G12106.T10 vs. NCBI nr
Match: XP_008447447.1 (PREDICTED: uncharacterized protein LOC103489892 isoform X1 [Cucumis melo] >KAA0038104.1 putative Transducin family protein / WD-40 repeat family protein [Cucumis melo var. makuwa])

HSP 1 Score: 412 bits (1060), Expect = 1.98e-131
Identity = 202/209 (96.65%), Postives = 205/209 (98.09%), Query Frame = 0 

Query: 1   MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMVYNLESGKMLES 60
           MAGKEEQS+WHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVM YNLESGKM+ES
Sbjct: 1   MAGKEEQSEWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMAYNLESGKMMES 60

Query: 61  FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL 120
           FRVFEGIRVHGISSISLNFNEASSF KLDFIL VFGEKRVKLYRISVEVIAEVCVNMVLL
Sbjct: 61  FRVFEGIRVHGISSISLNFNEASSFAKLDFILAVFGEKRVKLYRISVEVIAEVCVNMVLL 120

Query: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180
           CSLPRFNHWVLDACFLKSRDSSSLAGSD CGYIAIGCGDNSVHVWDTCESRMILKVESPE
Sbjct: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDRCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180

Query: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEIL 209
           RCLLYSMRLWGDDIDTIRVASGTIFNEI+
Sbjct: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEII 209

[Close]
BLAST of Cucsat.G12106.T10 vs. NCBI nr
Match: TYK20504.1 (putative Transducin family protein / WD-40 repeat family protein [Cucumis melo var. makuwa])

HSP 1 Score: 412 bits (1060), Expect = 2.19e-131
Identity = 202/209 (96.65%), Postives = 205/209 (98.09%), Query Frame = 0 

Query: 1   MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMVYNLESGKMLES 60
           MAGKEEQS+WHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVM YNLESGKM+ES
Sbjct: 1   MAGKEEQSEWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMAYNLESGKMMES 60

Query: 61  FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL 120
           FRVFEGIRVHGISSISLNFNEASSF KLDFIL VFGEKRVKLYRISVEVIAEVCVNMVLL
Sbjct: 61  FRVFEGIRVHGISSISLNFNEASSFAKLDFILAVFGEKRVKLYRISVEVIAEVCVNMVLL 120

Query: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180
           CSLPRFNHWVLDACFLKSRDSSSLAGSD CGYIAIGCGDNSVHVWDTCESRMILKVESPE
Sbjct: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDRCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180

Query: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEIL 209
           RCLLYSMRLWGDDIDTIRVASGTIFNEI+
Sbjct: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEII 209

[Close]
BLAST of Cucsat.G12106.T10 vs. NCBI nr
Match: XP_038903664.1 (WD repeat-containing protein 6 isoform X1 [Benincasa hispida])

HSP 1 Score: 385 bits (989), Expect = 3.60e-121
Identity = 187/209 (89.47%), Postives = 199/209 (95.22%), Query Frame = 0 

Query: 1   MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMVYNLESGKMLES 60
           MA KE Q++WHLHSGQYLGEISALCFLHLPPQISS PILLAGSGSEV+ YNLESGKM+ES
Sbjct: 1   MAAKEGQTEWHLHSGQYLGEISALCFLHLPPQISSLPILLAGSGSEVLTYNLESGKMIES 60

Query: 61  FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL 120
           FRVFEGIRVHGISSISLNF+EAS  TKLDF+LVVFGEKRVKLYRISVE+IAEVCVN+VLL
Sbjct: 61  FRVFEGIRVHGISSISLNFSEASFSTKLDFLLVVFGEKRVKLYRISVEMIAEVCVNLVLL 120

Query: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180
           CSLPRFNHWVLDACFLKSRDSSSLAGSD+CGYIAIGC DNS HVWDTCESRM LKVESP 
Sbjct: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDSCGYIAIGCSDNSFHVWDTCESRMTLKVESPV 180

Query: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEIL 209
           RCLLYSMRLWGDDI+T+RVASGTIFNEI+
Sbjct: 181 RCLLYSMRLWGDDIETLRVASGTIFNEII 209

[Close]
BLAST of Cucsat.G12106.T10 vs. NCBI nr
Match: XP_022998382.1 (WD repeat-containing protein 6 isoform X2 [Cucurbita maxima])

HSP 1 Score: 378 bits (970), Expect = 1.64e-118
Identity = 182/209 (87.08%), Postives = 199/209 (95.22%), Query Frame = 0 

Query: 1   MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMVYNLESGKMLES 60
           MA +EEQ++WHLHSGQYLGEISALCFLHLPPQISS PILLAGSGSEV+ YNLESG M+ES
Sbjct: 1   MAVEEEQTEWHLHSGQYLGEISALCFLHLPPQISSLPILLAGSGSEVLAYNLESGNMIES 60

Query: 61  FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL 120
           FRVFEGIRVHGISSISLNF+EASS TKLDF+LVVFGEKRVKLYR+SVE++AEVCV++V L
Sbjct: 61  FRVFEGIRVHGISSISLNFSEASSCTKLDFVLVVFGEKRVKLYRVSVEMVAEVCVHLVPL 120

Query: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180
           CSLPRFNHWVLDACFLKSRDSSS AGSD+CGYIAIGC DNSVHVWDTCESRMIL+VESPE
Sbjct: 121 CSLPRFNHWVLDACFLKSRDSSSSAGSDSCGYIAIGCSDNSVHVWDTCESRMILEVESPE 180

Query: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEIL 209
            CLLYSMRLWGD I+T+RVASGTIFNEI+
Sbjct: 181 SCLLYSMRLWGDAIETLRVASGTIFNEII 209

[Close]
BLAST of Cucsat.G12106.T10 vs. ExPASy TrEMBL
Match: A0A5A7T3R2 (Putative Transducin family protein / WD-40 repeat family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G003240 PE=4 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 9.59e-132
Identity = 202/209 (96.65%), Postives = 205/209 (98.09%), Query Frame = 0 

Query: 1   MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMVYNLESGKMLES 60
           MAGKEEQS+WHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVM YNLESGKM+ES
Sbjct: 1   MAGKEEQSEWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMAYNLESGKMMES 60

Query: 61  FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL 120
           FRVFEGIRVHGISSISLNFNEASSF KLDFIL VFGEKRVKLYRISVEVIAEVCVNMVLL
Sbjct: 61  FRVFEGIRVHGISSISLNFNEASSFAKLDFILAVFGEKRVKLYRISVEVIAEVCVNMVLL 120

Query: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180
           CSLPRFNHWVLDACFLKSRDSSSLAGSD CGYIAIGCGDNSVHVWDTCESRMILKVESPE
Sbjct: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDRCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180

Query: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEIL 209
           RCLLYSMRLWGDDIDTIRVASGTIFNEI+
Sbjct: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEII 209

[Close]
BLAST of Cucsat.G12106.T10 vs. ExPASy TrEMBL
Match: A0A1S3BID2 (uncharacterized protein LOC103489892 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489892 PE=4 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 9.59e-132
Identity = 202/209 (96.65%), Postives = 205/209 (98.09%), Query Frame = 0 

Query: 1   MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMVYNLESGKMLES 60
           MAGKEEQS+WHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVM YNLESGKM+ES
Sbjct: 1   MAGKEEQSEWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMAYNLESGKMMES 60

Query: 61  FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL 120
           FRVFEGIRVHGISSISLNFNEASSF KLDFIL VFGEKRVKLYRISVEVIAEVCVNMVLL
Sbjct: 61  FRVFEGIRVHGISSISLNFNEASSFAKLDFILAVFGEKRVKLYRISVEVIAEVCVNMVLL 120

Query: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180
           CSLPRFNHWVLDACFLKSRDSSSLAGSD CGYIAIGCGDNSVHVWDTCESRMILKVESPE
Sbjct: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDRCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180

Query: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEIL 209
           RCLLYSMRLWGDDIDTIRVASGTIFNEI+
Sbjct: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEII 209

[Close]
BLAST of Cucsat.G12106.T10 vs. ExPASy TrEMBL
Match: A0A5D3DAG9 (Putative Transducin family protein / WD-40 repeat family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00780 PE=4 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 1.06e-131
Identity = 202/209 (96.65%), Postives = 205/209 (98.09%), Query Frame = 0 

Query: 1   MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMVYNLESGKMLES 60
           MAGKEEQS+WHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVM YNLESGKM+ES
Sbjct: 1   MAGKEEQSEWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMAYNLESGKMMES 60

Query: 61  FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL 120
           FRVFEGIRVHGISSISLNFNEASSF KLDFIL VFGEKRVKLYRISVEVIAEVCVNMVLL
Sbjct: 61  FRVFEGIRVHGISSISLNFNEASSFAKLDFILAVFGEKRVKLYRISVEVIAEVCVNMVLL 120

Query: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180
           CSLPRFNHWVLDACFLKSRDSSSLAGSD CGYIAIGCGDNSVHVWDTCESRMILKVESPE
Sbjct: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDRCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180

Query: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEIL 209
           RCLLYSMRLWGDDIDTIRVASGTIFNEI+
Sbjct: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEII 209

[Close]
BLAST of Cucsat.G12106.T10 vs. ExPASy TrEMBL
Match: A0A6J1K7V5 (WD repeat-containing protein 6 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493034 PE=4 SV=1)

HSP 1 Score: 378 bits (970), Expect = 7.93e-119
Identity = 182/209 (87.08%), Postives = 199/209 (95.22%), Query Frame = 0 

Query: 1   MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMVYNLESGKMLES 60
           MA +EEQ++WHLHSGQYLGEISALCFLHLPPQISS PILLAGSGSEV+ YNLESG M+ES
Sbjct: 1   MAVEEEQTEWHLHSGQYLGEISALCFLHLPPQISSLPILLAGSGSEVLAYNLESGNMIES 60

Query: 61  FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL 120
           FRVFEGIRVHGISSISLNF+EASS TKLDF+LVVFGEKRVKLYR+SVE++AEVCV++V L
Sbjct: 61  FRVFEGIRVHGISSISLNFSEASSCTKLDFVLVVFGEKRVKLYRVSVEMVAEVCVHLVPL 120

Query: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180
           CSLPRFNHWVLDACFLKSRDSSS AGSD+CGYIAIGC DNSVHVWDTCESRMIL+VESPE
Sbjct: 121 CSLPRFNHWVLDACFLKSRDSSSSAGSDSCGYIAIGCSDNSVHVWDTCESRMILEVESPE 180

Query: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEIL 209
            CLLYSMRLWGD I+T+RVASGTIFNEI+
Sbjct: 181 SCLLYSMRLWGDAIETLRVASGTIFNEII 209

[Close]
BLAST of Cucsat.G12106.T10 vs. ExPASy TrEMBL
Match: A0A6J1KCC1 (WD repeat-containing protein 6 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493034 PE=4 SV=1)

HSP 1 Score: 378 bits (970), Expect = 9.04e-119
Identity = 182/209 (87.08%), Postives = 199/209 (95.22%), Query Frame = 0 

Query: 1   MAGKEEQSDWHLHSGQYLGEISALCFLHLPPQISSFPILLAGSGSEVMVYNLESGKMLES 60
           MA +EEQ++WHLHSGQYLGEISALCFLHLPPQISS PILLAGSGSEV+ YNLESG M+ES
Sbjct: 1   MAVEEEQTEWHLHSGQYLGEISALCFLHLPPQISSLPILLAGSGSEVLAYNLESGNMIES 60

Query: 61  FRVFEGIRVHGISSISLNFNEASSFTKLDFILVVFGEKRVKLYRISVEVIAEVCVNMVLL 120
           FRVFEGIRVHGISSISLNF+EASS TKLDF+LVVFGEKRVKLYR+SVE++AEVCV++V L
Sbjct: 61  FRVFEGIRVHGISSISLNFSEASSCTKLDFVLVVFGEKRVKLYRVSVEMVAEVCVHLVPL 120

Query: 121 CSLPRFNHWVLDACFLKSRDSSSLAGSDNCGYIAIGCGDNSVHVWDTCESRMILKVESPE 180
           CSLPRFNHWVLDACFLKSRDSSS AGSD+CGYIAIGC DNSVHVWDTCESRMIL+VESPE
Sbjct: 121 CSLPRFNHWVLDACFLKSRDSSSSAGSDSCGYIAIGCSDNSVHVWDTCESRMILEVESPE 180

Query: 181 RCLLYSMRLWGDDIDTIRVASGTIFNEIL 209
            CLLYSMRLWGD I+T+RVASGTIFNEI+
Sbjct: 181 SCLLYSMRLWGDAIETLRVASGTIFNEII 209

The following BLAST results are available for this feature:
BLAST of Cucsat.G12106.T10 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G12106.T10 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011651754.11.81e-13499.04uncharacterized protein LOC101207681 isoform X1 [Cucumis sativus] >KAE8650914.1 ... [more]
XP_008447447.11.98e-13196.65PREDICTED: uncharacterized protein LOC103489892 isoform X1 [Cucumis melo] >KAA00... [more]
TYK20504.12.19e-13196.65putative Transducin family protein / WD-40 repeat family protein [Cucumis melo v... [more]
XP_038903664.13.60e-12189.47WD repeat-containing protein 6 isoform X1 [Benincasa hispida][more]
XP_022998382.11.64e-11887.08WD repeat-containing protein 6 isoform X2 [Cucurbita maxima][more]
BLAST of Cucsat.G12106.T10 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T3R29.59e-13296.65Putative Transducin family protein / WD-40 repeat family protein OS=Cucumis melo... [more]
A0A1S3BID29.59e-13296.65uncharacterized protein LOC103489892 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3DAG91.06e-13196.65Putative Transducin family protein / WD-40 repeat family protein OS=Cucumis melo... [more]
A0A6J1K7V57.93e-11987.08WD repeat-containing protein 6 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1KCC19.04e-11987.08WD repeat-containing protein 6 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 116..166
e-value: 0.0046
score: 26.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..230
e-value: 1.5E-8
score: 35.6
NoneNo IPR availablePANTHERPTHR14344WD REPEAT PROTEINcoord: 14..209
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 10..176

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G12106Cucsat.G12106gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G12106.T10.E1Cucsat.G12106.T10.E1exon
Cucsat.G12106.T10.E2Cucsat.G12106.T10.E2exon
Cucsat.G12106.T10.E3Cucsat.G12106.T10.E3exon
Cucsat.G12106.T10.E4Cucsat.G12106.T10.E4exon
Cucsat.G12106.T10.E5Cucsat.G12106.T10.E5exon
Cucsat.G12106.T10.E6Cucsat.G12106.T10.E6exon
Cucsat.G12106.T10.E7Cucsat.G12106.T10.E7exon
Cucsat.G12106.T10.E8Cucsat.G12106.T10.E8exon
Cucsat.G12106.T10.E9Cucsat.G12106.T10.E9exon
Cucsat.G12106.T10.E10Cucsat.G12106.T10.E10exon
Cucsat.G12106.T10.E11Cucsat.G12106.T10.E11exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G12106.T10.C6Cucsat.G12106.T10.C6CDS
Cucsat.G12106.T10.C5Cucsat.G12106.T10.C5CDS
Cucsat.G12106.T10.C4Cucsat.G12106.T10.C4CDS
Cucsat.G12106.T10.C3Cucsat.G12106.T10.C3CDS
Cucsat.G12106.T10.C2Cucsat.G12106.T10.C2CDS
Cucsat.G12106.T10.C1Cucsat.G12106.T10.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G12106.T10Cucsat.G12106.T10-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding