Cucsat.G12077.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G12077.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	apoptotic chromatin condensation inducer in the nucleus
Location	ctg1821: 81900 .. 87985 (-)
RNA-Seq Expression	Cucsat.G12077.T2
Synteny	Cucsat.G12077.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGATTTTAATCGGACAGACTCTTCCCATCGTTTCACTACCAAACTCACATCGGCGAAGCAAAAAACCCTAGAAAGCCCCCCACAATCTCTTCGCTCTGTTTCTTCTTCCTTCTACGCCATTGATTTCCATTCATAAAATTTGTGTTAAACGAAAAAAACAAAGAAAGAAAAAGAAGAAAAAAAACACAACACATTTTCTTTTATCTCTTCCAAATTCCATTTTCTTCTTCTGTTTCTTCTCTCTTCTTCCTTTGTTTTCAGGTTACAGCGAACGAGTTGAGCCACTGATTTCGGGGGCCCATTTTTGTTCTTTTTTAATTAACTTTTTTCTTTGGAAGTTGTAATATTTAAGAGTTTTTCTGTTGTGGGTTTTCTTGAATGGTTGCTGTAATTTTTCCCTTTTAATCTCTAATGGTGGGTTTTGTTTTATGGAATTAGGGTTACAATTTTCCTTTCATTTCCTCATCTAAGGGTTTCTTCGCCTCTGTTTTTCTTTTCCTCTTCGCAAAGTCAAGCCAAATACTTTCGTGAGTCATTTTCACATTATCTTTTTTTTTTTTTTTCTTTCTTTCTTTCTAATTTTTATGATGTTTTCCGATGGCTCTTAATCATCCCTCTCTTTTTTTTCCTTGCAGGTTTGAAATTTGAGTTTTGAATTTAGCGGGATGTCTTCCAAATCGAAATATTCAATTCTCGACAATCGACCGATTGATCAGTGGAAGGTTACGGAGTTGAAAGAGGAACTTAAGAGAAGGAAATTGACCATCAAGGGGTTGAAGGAAGATTTGGTTAAACGGTTAGATGAAGCAGTTCGAATGGAAAGGGAAGAAAATGCTGAGGAAACCAATGGTGTTGATGGTGACCCTCCAGTTACAAATAGTGACAATAACCAAGAGCATGCATCTATTGTTTCTGGAACGGCGAAAGAAACTAATGAAGATACTAACATCACAGATAATGTAGATGATGTTGGAGTTCAGGTTGAAAAGGATGATAGTAATGCAGCTGTGAAGGAAGGTGGAATTCAAGATGGGGCTGGTCTTAATGGTTCCCCCAGGGTAGAAGAGGGATCGTCCGTCCGTGTTTCTACTGTGGAAACTAAAACTACTGTAACTGAAACCGTAGTATCTGAAGTAGCAATAGGTGTGGGTGTGGAAGGTTTGCAGAACACTGAAAGCAAGGATAACGAGGATAGGCTCGAGCTGGATAGTGAGGATTCAAAGCCCCAGCTGGATAGTGAGGAATCAAAGCCCCACATGGTTAGTGAGGAGTCAAAGCCTCAACTGGTTAGTGAGGGTTCAAAGCCACAGCTTGATAGTGAGGATTCAAAGCCCCTGCTTGATGATGTGAATATGGAGCTCCAGGTGGAGAATGAGTATTTGAAGTCTCAACAGGCAGATCTCGTGCACGACTCTTCTGCTCCAGACGACCAGGTATCTGAGGTCAGCCCTGTTTTAGGGTCTCAAGTAAGAACTGATTCTATTTCTACTGCTTCTGTGACAATTAATGAAATGATTGAACTAAAGGAAAATATGTCTGCTGATCATGTAAAATTAGAACTAGATGTTAAGCAGGAGATGGTGGAACCATCATCCAGCATTATTGTCCCAGATGCTGGCGAATCACATCCTATGGATGTTGAAGAGCCACATGTGAACAAGAATGTTCAAGAGTCACTTGCAAACAGAGATGTTCTGGAGTCACCTGAGAACAAAGATGTTATGGACTCTATTGTGAAAGAAGATGTTGAGAAGAAAGAAGATGTTAAGGACATAATTTCTGAGCTTCATGAGAAGCATGATGGTGTAGATGTGGGGTTCTCTGAAAAGCTTAATTTAGATAGAAGTTCTGGGGATGATTCAATAGAAGATACAACAGAGAATAAGACTGATTCAGTGAATAATCTTGAAGAAATGGGAGAGAAGAATGTAAAAAATGAGGGCCTTATGTCCCAAGAGGAAAAGGTTGTTGACATAGCAATGCGAGGCTCAACTGGAGACAGAAAGAGTATTGGTATAGAGAATGACGTTACATCTTTGCCTGCTGAAAAAAGAAGGCTTCATGGTAATGCTTACTTCTAGACCCTCTCTTCTTCCCCAAGCCTGATCCGAGCTACCAAAATGAAAGGAAATAAATGAAAACTGTGTTATTTTCTCAGCCTAATTAAATATTTCTGCATATAACATAAAAAATTTTAACTGAAAGAAAATAAATGCCAAACTGTTTACAAAAATATCAAAAGAAAAAAAATCATTGATAGACACGGATAGGTTTCTATTACATATATATCAATAATAAACTTTTATCAATTTCTATCAATAATAATATTGATGTTAGACTTCTATTAGTGTCTATTAGCGATAGACATGTATCAGTTTGTATAATTGATAGACATTGATGGGCCACCATCCAACTTCTATCTGGGCTGTAAGGAATGGAAATTTTTTTGCCATAACTTCTAATTAGTTTGGCCCATTTTTCTATATTTTAAAAGCCTTCTATAACATAAATGATTTTCTGTTTTGAAATTTTCAATATGGTTTTTCTGTCAGTACTGAAATTTTGACCTGATAATTTTATGGTTGGGAATTTTGATTTAAAGTTTTTCTTGTTATGTAATATTTTCAACTTATGTATATGCAATGTAATGGATGTCACTTTAGTTAGGGATAATGAATTTTTGTCATACATACCTTTTCTTGTTTTCCTACGAATAATATTATATCAATTGTTGGAATTGGTTTCTTCTTCCTTTTGTTAGTTGTATGTTGGATAAGGGTTGTCATTATTTTGATTCACCGGAATATATATGTGGAGTTTTAGAGTACACCCCACTACCATAAAAAGAGTTGTAAGAAGAGTATCTGTTGCTTGAGTCTCTTGAATTGCAGCTCAGAATATTGCTAGCTTTCTTTCAATGGATGATTTTGTTTTTTAGTATTTGGTAGTAAAGTTGATATTTAGTTTCTGCAGTATCTGCATTGGCTTTTCTGGAAGAAATAGGTAGCTAAATGATGCTTGACGACTGGATTTTGTTGTTGCCTCCCAGTGCTTAGTAATTGGCTAAGTGCTTTGGTGCAGTGTCAGTACTGTGTTGTGTTGTTGCGCTTTCTGTGAGTAGTGATGAGTCAAGTGTACAAAACATTGTTCTAGTTTTAAACAAAAGTTGCTGTTTGGATAAATTGTGTTGCTATGCTTTTTCATATTTTTGCTCGATGTTTTTCATTTTCTTTTTTCTTGTTCTTTTTTGAATTAGTTGTACCTCTTACATTCATGATGGGTGTCTTCTGGTAAGGTTTCTTTAGATGTAAGATGACCTTCAAATATAATGGATGGTTCATGGTTCTGTGAAATCTTGTTTTCAGTTGAACTAATATTCTCTCTGGCCATCTGGGGTTTACTTTCATTTCCAGCTAAATGGACAGGTTCTATCTCCATATCTGTCCATCTACATGTATCTCTTTCTTAGTGCCTTTTTCTGGCCATACCATGAAGTATCAGTCCAGACAGTTTCTGGGATGGATTGTCCCCATTTCTGCAAAACCCCATGCTCTATTCTCTCCTTGTTAAATGCTACCTTAACATTTTATTATACTCTCTCTTCTTCAAACTCCAAGTTCTGTGCTGAATTATTGTGGACGATTCAGTCACTAGCACTTCTAATTAGTATCGAGTGCATTCTTTTGTTTTGATGGACTTTATTGGGAGATTGTTCTTGTCATAAGTAAAATCATAGGAAAGTGGAACGTTGAGATCATATAGCCAATTTGTAGGTGTTTTCTCTTTTGTTTTCCCCCATGTTTTCTTGTCTTGGGCTTTCATTTTTGTATATTTCGCTTGATAGAAGTCTTCTTTTCTTGAAAAGAAATGTAATTTACGAAGGAGCTAAAGTAAAGGGTTGACATTCATTTGCACCTTTAGGAAGTAAGTGTTAATAGAAGGATAAAAGGTAATCCCTAGGCAAGTATAGAGAGGGAGCAAGGAAATGATTGAAGTTCACGGATTCATATATCAGATTCATCAAGTTACTTCTTTTTTGAATTTGTATTTCATGTGAGGCGACTGGTTGAGATGAGTTAAACCTTTAGACGTACGTTTTCTGGTATTTAAGTCTGGCTGTATTACGTTGAGTACCTCCCATATTTTCCATGTTAACAGTAAAATTGGGTCCTGTCCTGCTTCCTTCTGCTATGAATGTAAGAGAATTCACCTTAATCTGGCCGTCTTATTGCAAATAGTTACCTCTCTCTCTATAGTAATTTCGTCTTTTCTTTAAGTGGAGTTTAAAAGGGAATGTGGTTTTATAATTTGGATGGCGTGCTGTGATGGGGGTATGTGACAGGTCTTATTGATTATTGATTCAATTGAAGAACAGTTTACTGCATTGGATTTCCTTCAAATTTAAAATCAATTGTCTTTGTTTTGTTTTGTCTGATGAGGTTATTTTTGCAGATCAAGCAGTGGTTGGAAATGAGTCCGTGAAGAGACAGCGTAGGTGGAATTCTGAGAACCTCAAAATTCCAGAGCCCCAAAATGCTGCTCATACATCGACTAGTAATTCAAAGGACATTCATCAATCCACTGCTCCAAAACGCAACTTCTCCAGATCTGACTCCACAGCTAGTGAAGATCCATCAAAGGAACGTGTTGGTGAGTTAAATTTGAGGAGCTGACTATACTATAAGCTCTTGGCCATATCTGATTAAATTTGATGAGCTGACTATATTTTAAGCTCTTGGCCACATCTGATTCACTCGTCTCTCTTTTGCCTTTTGCAGTTCCACCATCACCAAAACCTCCCACAAACTCACTAAGAATTGATCGTTTTCTGCGTCCATTTACCCTCAAAGCTGTGCAAGAACTTCTGGGTAAGACTGGCAATGTTACCAGTTTCTGGATGGATCACATCAAGACGCATTGCTATGTAACTGTAAGACTCTTGGACATAACATTGAGTTTTCTAATTATTTTCTGCTTCAAGTGGTGCACAATGTGGAATTTGATTCTTGGACATAACATTGAGTTTTCTAATTATTGCTTGGAAACTAATGTCACCAATGCAGTACTCGTCGGTGGAAGAAGCCCTGAAGACTAGAGATGCTGTTTACAACCTTCAATGGCCACCAAATGGTGGGCGTCTTCTTATAGCTGAGTTTGTTGATCCTCAAGAAGTAAAAACTCGAGTAGAAGCTCCACAGACTCCTACACCTGCGGTGGTTGCTCCACCAGTCTCTAACGTGCCCCCACCCGTGCAACCCGAGCCTTCGCCTCGTCAACCAAGGCAGCAACATGCTCCGCCGCCTTCTCTTCCACCACCCCCGCCCACACCCACACCCACACCCACACCCACAAACAACGTTGCTCAAGCAAGGGAGCAGCTACCACTCCCACCTCCACCTGCACTTCCCGATAAAGTCGACACTCCTATTGTCACCTTAGACGACCTTTTCAGGAAAACCAAGGCTACTCCTCGCATTTACTATTTACCTTTATCAGACGAACAGGTGCAGATAAAACATACAGCATCAGCAAGGGGAAAAGACATTAAGCAGTAAGTTGAGACAATGCCCGTGATGATTAAGTGTTGTGTCGTGCCTGCTGCTTGATGTGCCCCTTGTGGATTCCTTAGCGAGTTTAGATTTTGGAAAATTAAAAAGGCATGGAGTGGCATGTTCGAATGTCTTGAGTGCTTGCAGGGAGGAATTTATCTCTGCTGAGCTGAAAATGATGGACGGGTTTTGGAATAGAATCCAATGGGTAGGTTTTTTCTTGCATATTAATTAGGATATTGAGATTGACTTCTAAAAGAAGAGGATTACTTTGTATTTTGGTTATGTAATCATGTTTTCCTGTGGGTACAAAAAAACCTATAATGAGTTAGCTTTGTAGTATGATTCATATGATGCCTTCTTCAAATTTCATGACACTAACTACTTCGGATCTGATTAACCACCGTGCTTTTGACTTTGTTATAGATGGACACATTTCTTCTTGCTTAATATTCTTTACCTCTAAAAGCTATGTATGTATATATGTATTATATAATATAATATAAGTCTCTTAATATGGTACAGTTCATTTTCG

Coding sequence (CDS)

ATGGATCACATCAAGACGCATTGCTATGTAACTTACTCGTCGGTGGAAGAAGCCCTGAAGACTAGAGATGCTGTTTACAACCTTCAATGGCCACCAAATGGTGGGCGTCTTCTTATAGCTGAGTTTGTTGATCCTCAAGAAGTAAAAACTCGAGTAGAAGCTCCACAGACTCCTACACCTGCGGTGGTTGCTCCACCAGTCTCTAACGTGCCCCCACCCGTGCAACCCGAGCCTTCGCCTCGTCAACCAAGGCAGCAACATGCTCCGCCGCCTTCTCTTCCACCACCCCCGCCCACACCCACACCCACACCCACACCCACAAACAACGTTGCTCAAGCAAGGGAGCAGCTACCACTCCCACCTCCACCTGCACTTCCCGATAAAGTCGACACTCCTATTGTCACCTTAGACGACCTTTTCAGGAAAACCAAGGCTACTCCTCGCATTTACTATTTACCTTTATCAGACGAACAGGTGCAGATAAAACATACAGCATCAGCAAGGGGAAAAGACATTAAGCAGTAA

Protein sequence

MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTPAVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTNNVAQAREQLPLPPPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIKQ

Homology

[Close]

BLAST of Cucsat.G12077.T2 vs. ExPASy Swiss-Prot
Match: Q9JIX8 (Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=3)

HSP 1 Score: 55.8 bits (133), Expect = 5.5e-07
Identity = 61/204 (29.90%), Postives = 91/204 (44.61%), Query Frame = 0


Query: 1    MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEV----------KT 60
            +D IK+HC+VTYS+VEEA+ TR A++ ++WP +  + L A++ +  E+           +
Sbjct: 1044 IDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAEQDELDYHRGLLVDRPS 1103

Query: 61   RVEAPQTPTPAVVAPPVSNVPPPVQPEPSPR--QPRQQHAPPPSLPP------------- 120
              +A +   P  + PP    PPPVQP P PR  Q  Q+ A                    
Sbjct: 1104 ETKAEEQGAPRPLHPP---PPPPVQPPPHPRAEQREQERAVREQWAEREREMERRERTRS 1163

Query: 121  ------------PPPTPTPTPTPTNNVAQAREQLPLPPPPALPDKVDTPIVTLDDLFRKT 168
                        P              A+++E+       A   + + P   LDDLFRKT
Sbjct: 1164 EREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKA---QEEPPAKLLDDLFRKT 1223

[Close]

BLAST of Cucsat.G12077.T2 vs. ExPASy Swiss-Prot
Match: Q9UKV3 (Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens OX=9606 GN=ACIN1 PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 2.7e-06
Identity = 63/206 (30.58%), Postives = 91/206 (44.17%), Query Frame = 0


Query: 1    MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEV------------ 60
            +D IK+HC+VTYS+VEEA+ TR A++ ++WP +  + L A++ +  E+            
Sbjct: 1045 IDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAEQDELDYHRGLLVDRPS 1104

Query: 61   KTRVEAPQTPTPAVVAPPVSNVPPPVQPEPSPR--QPRQQHAPPPSLPP----------- 120
            +T+ E    P P  + PP    PPPVQP   PR  Q  Q+ A                  
Sbjct: 1105 ETKTEEQGIPRP--LHPP---PPPPVQPPQHPRAEQREQERAVREQWAEREREMERRERT 1164

Query: 121  --------------PPPTPTPTPTPTNNVAQAREQLPLPPPPALPDKVDTPIVTLDDLFR 168
                          P              A+++E+       A   + + P   LDDLFR
Sbjct: 1165 RSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKA---QEEPPAKLLDDLFR 1224

[Close]

BLAST of Cucsat.G12077.T2 vs. NCBI nr
Match: XP_031745820.1 (uncharacterized protein LOC116406242 [Cucumis sativus])

HSP 1 Score: 330 bits (845), Expect = 1.03e-105
Identity = 174/176 (98.86%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 60
           MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP
Sbjct: 606 MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 665

Query: 61  AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPT--NNVAQAREQLP 120
           AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPT  NNVAQAREQLP
Sbjct: 666 AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTPTNNVAQAREQLP 725

Query: 121 LPPPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIKQ 174
           LPPPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIKQ
Sbjct: 726 LPPPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIKQ 781

[Close]

BLAST of Cucsat.G12077.T2 vs. NCBI nr
Match: KAE8637566.1 (hypothetical protein CSA_017843 [Cucumis sativus])

HSP 1 Score: 328 bits (841), Expect = 4.47e-104
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 60
           MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP
Sbjct: 141 MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 200

Query: 61  AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPT--NNVAQAREQLP 120
           AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPT  NNVAQAREQLP
Sbjct: 201 AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTPTNNVAQAREQLP 260

Query: 121 LPPPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIK 173
           LPPPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIK
Sbjct: 261 LPPPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIK 315

[Close]

BLAST of Cucsat.G12077.T2 vs. NCBI nr
Match: XP_008453771.1 (PREDICTED: apoptotic chromatin condensation inducer in the nucleus [Cucumis melo])

HSP 1 Score: 315 bits (806), Expect = 2.68e-100
Identity = 164/174 (94.25%), Postives = 168/174 (96.55%), Query Frame = 0


Query: 1   MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 60
           MDHIKTHCYVTYSSVEEA+KTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP
Sbjct: 573 MDHIKTHCYVTYSSVEEAMKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 632

Query: 61  AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTNNVAQAREQLPLP 120
           AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPP PTPT    NN+AQAREQLPLP
Sbjct: 633 AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPAPTPT----NNLAQAREQLPLP 692

Query: 121 PPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIKQ 174
           PPPALPDKVD PIVTLDDLFRKTKATPRIYYLPLSDEQVQ+KHTA+ARGKDIKQ
Sbjct: 693 PPPALPDKVDAPIVTLDDLFRKTKATPRIYYLPLSDEQVQVKHTAAARGKDIKQ 742

[Close]

BLAST of Cucsat.G12077.T2 vs. NCBI nr
Match: KAA0044733.1 (regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis melo var. makuwa])

HSP 1 Score: 315 bits (806), Expect = 4.94e-99
Identity = 164/174 (94.25%), Postives = 168/174 (96.55%), Query Frame = 0


Query: 1   MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 60
           MDHIKTHCYVTYSSVEEA+KTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP
Sbjct: 137 MDHIKTHCYVTYSSVEEAMKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 196

Query: 61  AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTNNVAQAREQLPLP 120
           AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPP PTPT    NN+AQAREQLPLP
Sbjct: 197 AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPAPTPT----NNLAQAREQLPLP 256

Query: 121 PPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIKQ 174
           PPPALPDKVD PIVTLDDLFRKTKATPRIYYLPLSDEQVQ+KHTA+ARGKDIKQ
Sbjct: 257 PPPALPDKVDAPIVTLDDLFRKTKATPRIYYLPLSDEQVQVKHTAAARGKDIKQ 306

[Close]

BLAST of Cucsat.G12077.T2 vs. NCBI nr
Match: XP_038891971.1 (apoptotic chromatin condensation inducer in the nucleus [Benincasa hispida])

HSP 1 Score: 296 bits (759), Expect = 3.28e-93
Identity = 156/174 (89.66%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 60
           MDHIKTHCYVTYSSVEEA+KTRDAVYNLQWPPNGGRLL+AEFVDPQEVK RVEAPQTPTP
Sbjct: 589 MDHIKTHCYVTYSSVEEAMKTRDAVYNLQWPPNGGRLLMAEFVDPQEVKNRVEAPQTPTP 648

Query: 61  AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTNNVAQAREQLPLP 120
           A VAPPVSNV PPVQPEPSPRQPRQQHAPPPSLPPPPPT        NN+AQAREQLPLP
Sbjct: 649 AAVAPPVSNVLPPVQPEPSPRQPRQQHAPPPSLPPPPPT--------NNLAQAREQLPLP 708

Query: 121 PPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIKQ 174
           PPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQ+K TA+ARGKD KQ
Sbjct: 709 PPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQVKQTAAARGKDTKQ 754

[Close]

BLAST of Cucsat.G12077.T2 vs. ExPASy TrEMBL
Match: A0A1S3BX60 (apoptotic chromatin condensation inducer in the nucleus OS=Cucumis melo OX=3656 GN=LOC103494402 PE=4 SV=1)

HSP 1 Score: 315 bits (806), Expect = 1.30e-100
Identity = 164/174 (94.25%), Postives = 168/174 (96.55%), Query Frame = 0


Query: 1   MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 60
           MDHIKTHCYVTYSSVEEA+KTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP
Sbjct: 573 MDHIKTHCYVTYSSVEEAMKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 632

Query: 61  AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTNNVAQAREQLPLP 120
           AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPP PTPT    NN+AQAREQLPLP
Sbjct: 633 AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPAPTPT----NNLAQAREQLPLP 692

Query: 121 PPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIKQ 174
           PPPALPDKVD PIVTLDDLFRKTKATPRIYYLPLSDEQVQ+KHTA+ARGKDIKQ
Sbjct: 693 PPPALPDKVDAPIVTLDDLFRKTKATPRIYYLPLSDEQVQVKHTAAARGKDIKQ 742

[Close]

BLAST of Cucsat.G12077.T2 vs. ExPASy TrEMBL
Match: A0A5A7TML3 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00170 PE=4 SV=1)

HSP 1 Score: 315 bits (806), Expect = 2.39e-99
Identity = 164/174 (94.25%), Postives = 168/174 (96.55%), Query Frame = 0


Query: 1   MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 60
           MDHIKTHCYVTYSSVEEA+KTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP
Sbjct: 137 MDHIKTHCYVTYSSVEEAMKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 196

Query: 61  AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTNNVAQAREQLPLP 120
           AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPP PTPT    NN+AQAREQLPLP
Sbjct: 197 AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPAPTPT----NNLAQAREQLPLP 256

Query: 121 PPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIKQ 174
           PPPALPDKVD PIVTLDDLFRKTKATPRIYYLPLSDEQVQ+KHTA+ARGKDIKQ
Sbjct: 257 PPPALPDKVDAPIVTLDDLFRKTKATPRIYYLPLSDEQVQVKHTAAARGKDIKQ 306

[Close]

BLAST of Cucsat.G12077.T2 vs. ExPASy TrEMBL
Match: A0A0A0KUK7 (SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G031040 PE=4 SV=1)

HSP 1 Score: 312 bits (799), Expect = 4.43e-99
Identity = 174/222 (78.38%), Postives = 174/222 (78.38%), Query Frame = 0


Query: 1   MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 60
           MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP
Sbjct: 573 MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 632

Query: 61  AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPT------------- 120
           AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPT             
Sbjct: 633 AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTPTPTPTPTPTPTP 692

Query: 121 -----------------------------------NNVAQAREQLPLPPPPALPDKVDTP 174
                                              NNVAQAREQLPLPPPPALPDKVDTP
Sbjct: 693 TPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTNNVAQAREQLPLPPPPALPDKVDTP 752

[Close]

BLAST of Cucsat.G12077.T2 vs. ExPASy TrEMBL
Match: A0A6J1ERI2 (histone acetyltransferase KAT6A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435887 PE=4 SV=1)

HSP 1 Score: 284 bits (726), Expect = 3.63e-89
Identity = 149/174 (85.63%), Postives = 157/174 (90.23%), Query Frame = 0


Query: 1   MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 60
           MDHIKTHCYVTYSSVEEA+KTRDAVYNLQWPPNGGRLLIAEFVDPQEVK RVE+PQTPTP
Sbjct: 532 MDHIKTHCYVTYSSVEEAMKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKIRVESPQTPTP 591

Query: 61  AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTNNVAQAREQLPLP 120
           A VAPPVS +PPP+QPEPSPRQPRQ  AP PSLPPPPPT        NN+AQAREQLPLP
Sbjct: 592 AAVAPPVSTMPPPMQPEPSPRQPRQHFAPSPSLPPPPPT--------NNLAQAREQLPLP 651

Query: 121 PPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIKQ 174
           PPPALPDKVDTPIVTLDDLF+KTKATPRIYYLPLSDEQVQ+K  A+ARGKD KQ
Sbjct: 652 PPPALPDKVDTPIVTLDDLFKKTKATPRIYYLPLSDEQVQVKRAAAARGKDTKQ 697

[Close]

BLAST of Cucsat.G12077.T2 vs. ExPASy TrEMBL
Match: A0A6J1EM87 (histone acetyltransferase KAT6A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435887 PE=4 SV=1)

HSP 1 Score: 284 bits (726), Expect = 3.88e-89
Identity = 149/174 (85.63%), Postives = 157/174 (90.23%), Query Frame = 0


Query: 1   MDHIKTHCYVTYSSVEEALKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKTRVEAPQTPTP 60
           MDHIKTHCYVTYSSVEEA+KTRDAVYNLQWPPNGGRLLIAEFVDPQEVK RVE+PQTPTP
Sbjct: 535 MDHIKTHCYVTYSSVEEAMKTRDAVYNLQWPPNGGRLLIAEFVDPQEVKIRVESPQTPTP 594

Query: 61  AVVAPPVSNVPPPVQPEPSPRQPRQQHAPPPSLPPPPPTPTPTPTPTNNVAQAREQLPLP 120
           A VAPPVS +PPP+QPEPSPRQPRQ  AP PSLPPPPPT        NN+AQAREQLPLP
Sbjct: 595 AAVAPPVSTMPPPMQPEPSPRQPRQHFAPSPSLPPPPPT--------NNLAQAREQLPLP 654

Query: 121 PPPALPDKVDTPIVTLDDLFRKTKATPRIYYLPLSDEQVQIKHTASARGKDIKQ 174
           PPPALPDKVDTPIVTLDDLF+KTKATPRIYYLPLSDEQVQ+K  A+ARGKD KQ
Sbjct: 655 PPPALPDKVDTPIVTLDDLFKKTKATPRIYYLPLSDEQVQVKRAAAARGKDTKQ 700

The following BLAST results are available for this feature:

BLAST of Cucsat.G12077.T2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9JIX8	5.5e-07	29.90	Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090...	[more]
Q9UKV3	2.7e-06	30.58	Apoptotic chromatin condensation inducer in the nucleus OS=Homo sapiens OX=9606 ...	[more]

BLAST of Cucsat.G12077.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745820.1	1.03e-105	98.86	uncharacterized protein LOC116406242 [Cucumis sativus]	[more]
KAE8637566.1	4.47e-104	98.86	hypothetical protein CSA_017843 [Cucumis sativus]	[more]
XP_008453771.1	2.68e-100	94.25	PREDICTED: apoptotic chromatin condensation inducer in the nucleus [Cucumis melo...	[more]
KAA0044733.1	4.94e-99	94.25	regulation of nuclear pre-mRNA domain-containing protein 1B [Cucumis melo var. m...	[more]
XP_038891971.1	3.28e-93	89.66	apoptotic chromatin condensation inducer in the nucleus [Benincasa hispida]	[more]

BLAST of Cucsat.G12077.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BX60	1.30e-100	94.25	apoptotic chromatin condensation inducer in the nucleus OS=Cucumis melo OX=3656 ...	[more]
A0A5A7TML3	2.39e-99	94.25	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Cucumis melo var....	[more]
A0A0A0KUK7	4.43e-99	78.38	SAP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G031040 PE=4 SV...	[more]
A0A6J1ERI2	3.63e-89	85.63	histone acetyltransferase KAT6A-like isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EM87	3.88e-89	85.63	histone acetyltransferase KAT6A-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032552	Acin1, RNSP1-SAP18 binding (RSB) motif	PFAM	PF16294	RSB_motif	coord: 129..165 e-value: 1.0E-13 score: 51.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..105
None	No IPR available	PANTHER	PTHR47031	SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN	coord: 1..169
IPR034257	Acinus, RNA recognition motif	CDD	cd12432	RRM_ACINU	coord: 1..56 e-value: 2.44277E-24 score: 88.8141

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G12077	Cucsat.G12077	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12077.T2.E1	Cucsat.G12077.T2.E1	exon
Cucsat.G12077.T2.E2	Cucsat.G12077.T2.E2	exon
Cucsat.G12077.T2.E3	Cucsat.G12077.T2.E3	exon
Cucsat.G12077.T2.E4	Cucsat.G12077.T2.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12077.T2.C2	Cucsat.G12077.T2.C2	CDS
Cucsat.G12077.T2.C1	Cucsat.G12077.T2.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12077.T2	Cucsat.G12077.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0006397	mRNA processing
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity