Cucsat.G12022.T4 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTCTCTTACTGGACTGTCACGCGCCTTTTCCAGCGGTGACGGATATGTTTAATGTTTAAACTAGTTTAGTATAGTTTATAGTTTATACCCACTAGTCTGTGATTAAAACTTCACCGAAACAACAAGAAGGAAGAAGAAGAAGAAGAAGGGATGACGCTGGGGCTTATCAATGCGAATCCAGTGGTTCACGCCAAGAAGGAGCGGATCGCTCGCTCGGAAGACTTCCACGGTGACGACGCTGTTGATCCTCTTGAAATCTATGATATCCTTTTCTTAACTGTTTGTGTTTTTACTAAATTTTGAGTTCTCCTTTCATTTTATTTGAACTTCAATTTTCGCTGTGGTTTCTTGCTTAATTCTGATTATCAAGTTAATTAGATTCCGTTTTGTCTGTATGCTTTTGGAGGATTCTCTTGTTTTCTTTTAGAATTTTCTAGCGCTTTCTTCGTGACCGAACGTGTAAATTTTTTGGATGATTTTGTGGAAATTGAGCTTTCGGAATCTGGTATTTGATTGTCAATTTGTAAATTTCTTGTCCTTGACTTCAATTTTGACACATTTCGTGAGGGATATTAGAGATCCGGAGCATCCGTATTCGTTAGAGCAGCTTAGTGTTCTCTCGGAGGAATCGATCACTGTCGATGAGAAGTTAGGGCGTATCCTGTAAGCTAAACTGCAACTCCTTTATTTTCTCTACCTCTTTGATTTTGAAAGACAATCTGAGATTATTGATTAATAATCGTATGGCTTGCACAAACACGTTCCTCGAGGATTTCTAGTGTAGCTTAAGTTTGATCGAAATGCCGTCAGCTTTGGATTCCTAAATTGTTTGCTGAATTAGTGTTTTTCTCACAGGATAACTTTTACTCCGACTATTCAGCATTGTAGTATGGCGACTGTGATTGGACTCTGTCTGAGAGTGAAACTTAAACATTTCTTTCCTCCACATTACAAGGTCAATTCACATTCCTTTCTTTAGCTACAAACTTGAAACATTGACGTACTGCTTCTTCAATTTCATTTCTCCACTCTACTTGATGCAATGCAATCACCAGATACTAATGGAATCGTGGCTTCTAAATTAATGTTCTCTGTATTCTCAATTTTAGGTGCCTGAACTTTGAAATTAATGTCTGATTCTCCGAATTTTCGGCCTTAATCTTTTAAGAACTCCTTAAATTTAGGTCCTTAACCAACCTGTTTTAAAATTTACTAACTAACTTATGAACATAAAATTGAAAGTTTAATAACTTAAGAGATAATAAATTGTACATCTTATGTACTTGTACATTTTTTAAAAAATTATTGAATAGGCTAAAGATTTGTTAGACATATAATTGAACGTTGAGTGACTTTTGGAGACCTATTAAACAAAACCTTACATTTAATGCAAATTCAAAGTTTAGGGGTTAAATTGGATGTTCTTAGTTTTTGAGGGAAACGATCATGAGAATAGTGCCTTTGGGGTCCATTTCACTTGCAAGGACTGCATGGGGGTAAATTTTAGGTGATTTCTTTTGGGGCTTAGTTTATAAACTTGGATTATATCAGGTTACCATTTAACAAAACTAAGGAGAAGCTTATTGTTCAAGAAAATTAGTTGTTAATGAAAATTGAAAACTAAAAACTTGTTTTCTGTTTTTGAAAATTGGCCAATAATGCAATTTTTTTACTTAAGATTGATAAACCATGGTAAGAAAATGAAAGAAAATAGACATCTATTTCAAAAATCAAGAATGGTTACCAATTGAGACTTTATATTATATATAAAGACAGATACATTCCCCATCTCAATCTTCCCGTCTTCAATTTGCCTTTTAGGTGATTTGATGATATTCGTACAACCATGAAGTCAATTTGAATGTTTACCTTACTTGTACAGGATCTACTCTATAGGTTGTATAATTGTATCATTGAGTTTTCTGACATATTTATTTATATATATAACTCAAGTTTCGATTGTCCACTACAATTTTTTTATCATGGATTTTGCAGGTTGACATCAAAGTGTCTCCAGGATCACACGCAAATGAAGACTCAGGTGAGATTAAAACATTCTAAAGTGTTATTGGATCAAAATACCCCTTGGAGAAAAGATCATGATATCGGCGATTGAGTTTTTTAGAAGCCTTAAATATTTGATAACTATTACTTCTTACTAACAGCATTAATCTGTCGTTTTTTACCCAACTGCTTGGATTGAACCAATAGTTAAATAGAGTTACATTTTAGTTATTATTTTCCTTTTTTGGAAGGAAATAGCTATTTGATTTAAATTATTATTGTCGGGTAAGTCTGTTAACCATTTGGTGTTTTTAGAAATTAAGCTTATAAACACATCGTTCCTAGAAAAAAACTAAGCATAAACTTAAAGAAGATTAAACTGAAAATGAAAGTGTCACCTAATGTAGCTTTAATAAACTTATATGAATAATATAATTAGAACGAACATGAATAACTGTTTGTTCTTTTTTTACGATGAAAGAACAGTTAACAAGCAGCTAAATGACAAAGAAAGAGTTGCAGCTGCAATGGAAAATCCAAATCTGCGTCAGCTTGTAGATGAATGCCTTTATTCCAGTGAGCTCTGAATCAAATCAATTATCAACGTCCAACGGGCCAAAAATGAAGGTAGTCTTCCAATTTAATGAAATATAAATTACATTTCAACTTTGTCTTCTGGCTTATAATTTTTTCAAATAGAATACACATTAGTCCTGAAAAAGTTCTCAAAGTGCATCTCTTTAACAATAATTTTATTCTTAAAGTTCAAGAACATAATTAAAATCTATTCCAAAGTAGAGATATTCATATAAATTAACATACAATACATATGATTATTTACTTTTTTTTTTTTGTTCTTTTGTTCTTTTGTTTTTGATTCTCACTCTCTGGAAATGAAACTCTTCGTTGTGCAAAAAATCAAGTTCAACGCACTATTGGGTACTTCAATTTTGATCCAAACAAATCATCTTTTCATCAAATGGGGAGGTACATGAGTTTATTATATAATACCTGTTCATTTATTTGCTATTTCTGCCTGTATATGTGAATGAACTTTTATCTGAGTTACTAATATATTATAGTTTAACGTTTCTTCAAATTTCTGTGTTTGTATTAAAAAAAAGTTTTTAATTTAAAAAAATACGGGGAAGATTCTTTTACTAATTCATCTCTCCGTAAGAATTTTAGATTTATTGGTTGAGCCTTTACAACTTGAAGTGGGTTTGTGTTTATCAACAAATCCATTTGCCATGGGTTTGTTATTTGTTTTTAGCTGTGTGTTTTTTGGGTTGAAGAAATTTGAATGATGAGTTGAGAATTTTATTAAACTAAGGAGATGGTATTTTCAAATTGAAATAGAAAAATAAAGTGTTGTTTCTTTCATATGTAGGAAAAACTGAGCATTAGCAAATGAGTGTTTTGCTTTTCTTGCATTTAGTATTTAAGTCGTATTCCAAAAAAACAAGAACAAGTTTTTTTTTTTTTTTTTAAAAAAAGATATGTATTCTAATTTTCAAGATTTGAATGTAAAGCATTCATTCATTAGTACAAGAAGAATTGTAAAATAAATGGGATAAATTGATCGGACCTAGTCTAAAATCGATTCTTGTTAAATTTAAAATAAAGGTAGCAGTATAATTGATCATAAATTCACACATAAATTTAAGTTAGTCTAGTATAGATTAGTTTTTTTTTTCCACTTCAAAAAGATTAAAAAAGACAATCAAATAGTTGTCAAAACTTTAATCTATAAAATTCACTCAATTTCTTCTTTCCTTTTCTATCTTTATTATTATCATTATTATTATTTAAATATCTCAAAAACTCATATATAGGCCGTTTTGGTTGGCCTATAGACATGGTTTCAAGAGCTATATTGGTCTATGGCATCACAGTTAGTTACATCCTGTAGCTGCCGACGTTTGACATATGAGCTTTTGATGCATGGAGTTGAGTTGAGTAATAATTATGATAATAACATACTCTGACATTTTAATAGATCAAGTTAGGCCAGAAAAGGAATATATGATATATGAAATTGGCTGTAATTCGAAGCCTAAACTTAAAGGCATGTGTCTCTCTAAGTTTATTATAAATGATACATGGAAAAAAATATGCAACAAAGTAAAGAAATTATAGTAATTTTCTTCTATTCTAAAGAGAGACAGCTACAAGAGAGAAATCAACAAAAGGTATCCCTCCATGTATTTATTCTTTTTTTTTAGAAAACATTATTGGGCTCTCTTGATAATTCTACTGTGTAAGTTAACACAATATATATAACAATAGTCTCTCATGGTTGGTTGGCAGAGACTAATTACTTATGGATATGAGCAAACATCATCTCCTTTGCATTAAAGAGAAGTTGATTATTATTTAACTTTCAAAATGGGCTGTAAAAAGGGGAGAGGCATGAGAGACATACCAGTTAGTTAGTTAGTCAGTTAGTTGGCGTAACGGGCTCAGGTCCAACTTCTGGGCCAGAGGAAGGCCCATTAACACTGTGTTGGGCCTTCTCATCAAAGCCCCAGAATTGGGCAGCTTTAAGCTCGTCTTGGCCCATCATCTGGGAGAACTGCTGATGATCATATTCGAGTGTGGCTTTACCTCCAAACACACTGGGAAGATTTTCCATGTCGAAGTGTGATTTCATCAGCTCCACACTTCCTTTGTCTTTCGGATTTACAAACTTTACCTTTTGAAATGTCTTTGGATCCAAGAAGTACTTTATAGCCTATAAAAATTGGAACAATCAATCTACTGGTTATTTCATTCGTGACAAAATAGGAAGGAAGTTTGGAGTTGATTGTTCGATCGTGTCCACATTTTCTATAAAGATATTAATATTGATGATACTTGAAAAGAAAATCATGGGAATTAACTTTTACTATTTGAATTAATAAAGGCACACTTAAACTTTATCCTTAGTGTACATACTGATTACTTTTTGTTGGTATTCAGATCCATAGATTGTCTTGAAATATTACGAACTATTGAGAGAAAGCTAAAAGCAGTAGGAATATTCAATTGTATGGATGCATGTATATGAATGATGGCATTAAAGAGCACATACCTTCCAGAAGGCTTGAAAAAACTTGGGGGGATTGTAGAGGAAAGCAAAGGCAAGTCTCTCGGGGTAATGGTTCTGAAGGACATTGATAATATCTGCGGCTATTTTGACAGAGACATTGGTTTTCATTGTAAATCCGGTGAAATCTATTAACCAACACATTTGTTCCTGACCCTCACCAAGGTTCATAATCGCATTCTCTAAAAGATAGACCAAATGCCGCACACTGGCTTCTGATGGAGTTGTGTTCTGAGAGATTTCAAAAATAGGAACTGTCACTAAAATCAGAAAGTGAATGCAAAACACAAAAAAGATCAAAACTTAAATTTGCAAATGAATGGACCACTTCTATACTGTGTACTTTTTATTTTTCTAAAAATTTGTCTACTTATTATTTCTTTCTGATGAGTGGTGGGAGGATTTGATATAATGCCTTAGTTTAGTCATGTAGAATTTGATAAATATCTTATCTAAACCTAGATGATCATTCAGATGCTTCTCTCT ATGACGCTGGGGCTTATCAATGCGAATCCAGTGGTTCACGCCAAGAAGGAGCGGATCGCTCGCTCGGAAGACTTCCACGGTGACGACGCTGTTGATCCTCTTGAAATCTATGATTTCGTGAGGGATATTAGAGATCCGGAGCATCCGTATTCGTTAGAGCAGCTTAGTGTTCTCTCGGAGGAATCGATCACTGTCGATGAGAAGTTAGGGCGTATCCTGATAACTTTTACTCCGACTATTCAGCATTGTAGTATGGCGACTGTGATTGGACTCTGTCTGAGAGTGAAACTTAAACATTTCTTTCCTCCACATTACAAGGTTGACATCAAAGTGTCTCCAGGATCACACGCAAATGAAGACTCAGTTAACAAGCAGCTAAATGACAAAGAAAGAGTTGCAGCTGCAATGGAAAATCCAAATCTGCGTCAGCTTGTAGATGAATGCCTTTATTCCAGTGAGCTCTGA MTLGLINANPVVHAKKERIARSEDFHGDDAVDPLEIYDFVRDIRDPEHPYSLEQLSVLSEESITVDEKLGRILITFTPTIQHCSMATVIGLCLRVKLKHFFPPHYKVDIKVSPGSHANEDSVNKQLNDKERVAAAMENPNLRQLVDECLYSSEL Homology
BLAST of Cucsat.G12022.T4 vs. ExPASy Swiss-Prot
Match: A8MR89 (Protein AE7-like 1 OS=Arabidopsis thaliana OX=3702 GN=AEL1 PE=3 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 2.3e-65 Identity = 122/154 (79.22%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. ExPASy Swiss-Prot
Match: Q9C9G6 (Protein AE7 OS=Arabidopsis thaliana OX=3702 GN=AE7 PE=1 SV=2) HSP 1 Score: 193.0 bits (489), Expect = 2.6e-48 Identity = 92/157 (58.60%), Postives = 122/157 (77.71%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. ExPASy Swiss-Prot
Match: O62252 (MIP18 family protein F45G2.10 OS=Caenorhabditis elegans OX=6239 GN=F45G2.10 PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 3.2e-35 Identity = 79/151 (52.32%), Postives = 100/151 (66.23%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. ExPASy Swiss-Prot
Match: Q9VTC4 (MIP18 family protein galla-2 OS=Drosophila melanogaster OX=7227 GN=galla-2 PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 9.4e-35 Identity = 73/146 (50.00%), Postives = 107/146 (73.29%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. ExPASy Swiss-Prot
Match: Q9D187 (Cytosolic iron-sulfur assembly component 2B OS=Mus musculus OX=10090 GN=Ciao2b PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 4.7e-34 Identity = 72/148 (48.65%), Postives = 105/148 (70.95%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. NCBI nr
Match: XP_004149152.1 (protein AE7-like 1 [Cucumis sativus] >XP_008453741.1 PREDICTED: protein AE7-like 1 [Cucumis melo] >XP_031740257.1 protein AE7-like 1 [Cucumis sativus] >XP_038893023.1 protein AE7-like 1 [Benincasa hispida] >XP_038893030.1 protein AE7-like 1 [Benincasa hispida]) HSP 1 Score: 307 bits (787), Expect = 2.21e-105 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. NCBI nr
Match: XP_022136890.1 (protein AE7-like 1 [Momordica charantia]) HSP 1 Score: 300 bits (768), Expect = 1.75e-102 Identity = 150/154 (97.40%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. NCBI nr
Match: XP_022984190.1 (protein AE7-like 1 isoform X2 [Cucurbita maxima]) HSP 1 Score: 298 bits (762), Expect = 1.44e-101 Identity = 149/153 (97.39%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. NCBI nr
Match: XP_015889928.1 (protein AE7-like 1 [Ziziphus jujuba]) HSP 1 Score: 297 bits (761), Expect = 2.04e-101 Identity = 146/154 (94.81%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. NCBI nr
Match: XP_023551936.1 (protein AE7-like 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 297 bits (761), Expect = 2.04e-101 Identity = 149/153 (97.39%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. ExPASy TrEMBL
Match: A0A0A0KUM2 (FeS_assembly_P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G038660 PE=3 SV=1) HSP 1 Score: 307 bits (787), Expect = 1.07e-105 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. ExPASy TrEMBL
Match: A0A1S3BWZ8 (protein AE7-like 1 OS=Cucumis melo OX=3656 GN=LOC103494387 PE=3 SV=1) HSP 1 Score: 307 bits (787), Expect = 1.07e-105 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. ExPASy TrEMBL
Match: A0A6J1C573 (protein AE7-like 1 OS=Momordica charantia OX=3673 GN=LOC111008470 PE=3 SV=1) HSP 1 Score: 300 bits (768), Expect = 8.45e-103 Identity = 150/154 (97.40%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. ExPASy TrEMBL
Match: A0A6J1J802 (protein AE7-like 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482581 PE=3 SV=1) HSP 1 Score: 298 bits (762), Expect = 6.95e-102 Identity = 149/153 (97.39%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of Cucsat.G12022.T4 vs. ExPASy TrEMBL
Match: A0A6P4A8B7 (protein AE7-like 1 OS=Ziziphus jujuba OX=326968 GN=LOC107424594 PE=3 SV=1) HSP 1 Score: 297 bits (761), Expect = 9.87e-102 Identity = 146/154 (94.81%), Postives = 153/154 (99.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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