Cucsat.G12022.T20 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACTGTCACGCGCCTTTTCCAGCGGTGACGGATATGTTTAATGTTTAAACTAGTTTAGTATAGTTTATAGTTTATACCCACTAGTCTGTGATTAAAACTTCACCGAAACAACAAGAAGGAAGAAGAAGAAGAAGAAGGGATGACGCTGGGGCTTATCAATGCGAATCCAGTGGTTCACGCCAAGAAGGAGCGGATCGCTCGCTCGGAAGACTTCCACGGTGACGACGCTGTTGATCCTCTTGAAATCTATGATATCCTTTTCTTAACTGTTTGTGTTTTTACTAAATTTTGAGTTCTCCTTTCATTTTATTTGAACTTCAATTTTCGCTGTGGTTTCTTGCTTAATTCTGATTATCAAGTTAATTAGATTCCGTTTTGTCTGTATGCTTTTGGAGGATTCTCTTGTTTTCTTTTAGAATTTTCTAGCGCTTTCTTCGTGACCGAACGTGTAAATTTTTTGGATGATTTTGTGGAAATTGAGCTTTCGGAATCTGGTATTTGATTGTCAATTTGTAAATTTCTTGTCCTTGACTTCAATTTTGACACATTTCGTGAGGGATATTAGAGATCCGGAGCATCCGTATTCGTTAGAGCAGCTTAGTGTTCTCTCGGAGGAATCGATCACTGTCGATGAGAAGTTAGGGCGTATCCTGTAAGCTAAACTGCAACTCCTTTATTTTCTCTACCTCTTTGATTTTGAAAGACAATCTGAGATTATTGATTAATAATCGTATGGCTTGCACAAACACGTTCCTCGAGGATTTCTAGTGTAGCTTAAGTTTGATCGAAATGCCGTCAGCTTTGGATTCCTAAATTGTTTGCTGAATTAGTGTTTTTCTCACAGGATAACTTTTACTCCGACTATTCAGCATTGTAGTATGGCGACTGTGATTGGACTCTGTCTGAGAGTGAAACTTAAACATTTCTTTCCTCCACATTACAAGGTCAATTCACATTCCTTTCTTTAGCTACAAACTTGAAACATTGACGTACTGCTTCTTCAATTTCATTTCTCCACTCTACTTGATGCAATGCAATCACCAGATACTAATGGAATCGTGGCTTCTAAATTAATGTTCTCTGTATTCTCAATTTTAGGTGCCTGAACTTTGAAATTAATGTCTGATTCTCCGAATTTTCGGCCTTAATCTTTTAAGAACTCCTTAAATTTAGGTCCTTAACCAACCTGTTTTAAAATTTACTAACTAACTTATGAACATAAAATTGAAAGTTTAATAACTTAAGAGATAATAAATTGTACATCTTATGTACTTGTACATTTTTTAAAAAATTATTGAATAGGCTAAAGATTTGTTAGACATATAATTGAACGTTGAGTGACTTTTGGAGACCTATTAAACAAAACCTTACATTTAATGCAAATTCAAAGTTTAGGGGTTAAATTGGATGTTCTTAGTTTTTGAGGGAAACGATCATGAGAATAGTGCCTTTGGGGTCCATTTCACTTGCAAGGACTGCATGGGGGTAAATTTTAGGTGATTTCTTTTGGGGCTTAGTTTATAAACTTGGATTATATCAGGTTACCATTTAACAAAACTAAGGAGAAGCTTATTGTTCAAGAAAATTAGTTGTTAATGAAAATTGAAAACTAAAAACTTGTTTTCTGTTTTTGAAAATTGGCCAATAATGCAATTTTTTTACTTAAGATTGATAAACCATGGTAAGAAAATGAAAGAAAATAGACATCTATTTCAAAAATCAAGAATGGTTACCAATTGAGACTTTATATTATATATAAAGACAGATACATTCCCCATCTCAATCTTCCCGTCTTCAATTTGCCTTTTAGGTGATTTGATGATATTCGTACAACCATGAAGTCAATTTGAATGTTTACCTTACTTGTACAGGATCTACTCTATAGGTTGTATAATTGTATCATTGAGTTTTCTGACATATTTATTTATATATATAACTCAAGTTTCGATTGTCCACTACAATTTTTTTATCATGGATTTTGCAGGTTGACATCAAAGTGTCTCCAGGATCACACGCAAATGAAGACTCAGGTGAGATTAAAACATTCTAAAGTGTTATTGGATCAAAATACCCCTTGGAGAAAAGATCATGATATCGGCGATTGAGTT ATGACGCTGGGGCTTATCAATGCGAATCCAGTGGTTCACGCCAAGAAGGAGCGGATCGCTCGCTCGGAAGACTTCCACGGTGACGACGCTGTTGATCCTCTTGAAATCTATGATTTCGTGAGGGATATTAGAGATCCGGAGCATCCGTATTCGTTAGAGCAGCTTAGTGTTCTCTCGGAGGAATCGATCACTGTCGATGAGAAGTTAGGGCGTATCCTGATAACTTTTACTCCGACTATTCAGCATTGTAGTATGGCGACTGTGATTGGACTCTGTCTGAGAGTGAAACTTAAACATTTCTTTCCTCCACATTACAAGGTTGACATCAAAGTGTCTCCAGGATCACACGCAAATGAAGACTCAGGTGAGATTAAAACATTCTAA MTLGLINANPVVHAKKERIARSEDFHGDDAVDPLEIYDFVRDIRDPEHPYSLEQLSVLSEESITVDEKLGRILITFTPTIQHCSMATVIGLCLRVKLKHFFPPHYKVDIKVSPGSHANEDSGEIKTF Homology
BLAST of Cucsat.G12022.T20 vs. ExPASy Swiss-Prot
Match: A8MR89 (Protein AE7-like 1 OS=Arabidopsis thaliana OX=3702 GN=AEL1 PE=3 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 2.1e-48 Identity = 94/121 (77.69%), Postives = 104/121 (85.95%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. ExPASy Swiss-Prot
Match: Q9C9G6 (Protein AE7 OS=Arabidopsis thaliana OX=3702 GN=AE7 PE=1 SV=2) HSP 1 Score: 144.8 bits (364), Expect = 6.6e-34 Identity = 67/125 (53.60%), Postives = 93/125 (74.40%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. ExPASy Swiss-Prot
Match: Q9VTC4 (MIP18 family protein galla-2 OS=Drosophila melanogaster OX=7227 GN=galla-2 PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 7.3e-25 Identity = 56/116 (48.28%), Postives = 81/116 (69.83%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. ExPASy Swiss-Prot
Match: O62252 (MIP18 family protein F45G2.10 OS=Caenorhabditis elegans OX=6239 GN=F45G2.10 PE=1 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 9.5e-25 Identity = 60/123 (48.78%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. ExPASy Swiss-Prot
Match: Q9D187 (Cytosolic iron-sulfur assembly component 2B OS=Mus musculus OX=10090 GN=Ciao2b PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.8e-23 Identity = 53/118 (44.92%), Postives = 79/118 (66.95%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. NCBI nr
Match: XP_004149152.1 (protein AE7-like 1 [Cucumis sativus] >XP_008453741.1 PREDICTED: protein AE7-like 1 [Cucumis melo] >XP_031740257.1 protein AE7-like 1 [Cucumis sativus] >XP_038893023.1 protein AE7-like 1 [Benincasa hispida] >XP_038893030.1 protein AE7-like 1 [Benincasa hispida]) HSP 1 Score: 246 bits (627), Expect = 1.83e-81 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. NCBI nr
Match: XP_023551936.1 (protein AE7-like 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 244 bits (623), Expect = 7.44e-81 Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. NCBI nr
Match: XP_022984190.1 (protein AE7-like 1 isoform X2 [Cucurbita maxima]) HSP 1 Score: 243 bits (619), Expect = 3.03e-80 Identity = 119/121 (98.35%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. NCBI nr
Match: XP_022929193.1 (protein AE7-like 1 isoform X2 [Cucurbita moschata]) HSP 1 Score: 241 bits (615), Expect = 1.23e-79 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. NCBI nr
Match: XP_022136890.1 (protein AE7-like 1 [Momordica charantia]) HSP 1 Score: 239 bits (611), Expect = 5.02e-79 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. ExPASy TrEMBL
Match: A0A0A0KUM2 (FeS_assembly_P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G038660 PE=3 SV=1) HSP 1 Score: 246 bits (627), Expect = 8.84e-82 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. ExPASy TrEMBL
Match: A0A1S3BWZ8 (protein AE7-like 1 OS=Cucumis melo OX=3656 GN=LOC103494387 PE=3 SV=1) HSP 1 Score: 246 bits (627), Expect = 8.84e-82 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. ExPASy TrEMBL
Match: A0A6J1J802 (protein AE7-like 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482581 PE=3 SV=1) HSP 1 Score: 243 bits (619), Expect = 1.47e-80 Identity = 119/121 (98.35%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. ExPASy TrEMBL
Match: A0A6J1ERE3 (protein AE7-like 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435861 PE=3 SV=1) HSP 1 Score: 241 bits (615), Expect = 5.97e-80 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Cucsat.G12022.T20 vs. ExPASy TrEMBL
Match: A0A6J1C573 (protein AE7-like 1 OS=Momordica charantia OX=3673 GN=LOC111008470 PE=3 SV=1) HSP 1 Score: 239 bits (611), Expect = 2.43e-79 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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