Cucsat.G11870.T1 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G11870.T1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	UNC93-like protein 1
Location	ctg1820: 2026666 .. 2027107 (-)
RNA-Seq Expression	Cucsat.G11870.T1
Synteny	Cucsat.G11870.T1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCAAGGAATCGGGCTCTGAATTTGTTGGGCCTTTCTTCTTGTACTTCTGTTTCGGGCTGTTGGATGCTATGTTTCAGAGCATGGTTTACTGGGTTATTGGAGCTTTGGCGGATGATTCAGAGACCTTGAGCAGGTATGAGATCAACGTGTTATTATTTCACATATAAAAATTATTGAGATTATATCATGTAATTATTGAAGATAAAACACACAGGTACAGTGGATTCTATAAAGGAGTGCAGAGTGCAGGAGCTGCAGTGGCTTGGCAAGTTGACAACCACCATGTTTCCTTCATGCGTCAGCTGGTTGTGAACTGGTCACTCACAACACTAAGTTATCCTTTGTTGTTGGTTCTCGTGTTTTTGGCTGTCAATGATGACGTCCATGACGAAAAGAAGTTTATCGACGAAACTCGCAAGGAGGTTAACTCTTCTATAAT

Coding sequence (CDS)

TTCAAGGAATCGGGCTCTGAATTTGTTGGGCCTTTCTTCTTGTACTTCTGTTTCGGGCTGTTGGATGCTATGTTTCAGAGCATGGTTTACTGGGTTATTGGAGCTTTGGCGGATGATTCAGAGACCTTGAGCAGGTACAGTGGATTCTATAAAGGAGTGCAGAGTGCAGGAGCTGCAGTGGCTTGGCAAGTTGACAACCACCATGTTTCCTTCATGCGTCAGCTGGTTGTGAACTGGTCACTCACAACACTAAGTTATCCTTTGTTGTTGGTTCTCGTGTTTTTGGCTGTCAATGATGACGTCCATGACGAAAAGAAGTTTATCGACGAAACTCGCAAGGAGGTTAACTCTTCTATA

Protein sequence

FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI

Homology

[Close]

BLAST of Cucsat.G11870.T1 vs. ExPASy Swiss-Prot
Match: Q56WD3 (UNC93-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g18000 PE=2 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 9.2e-38
Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           FK+SG EF GPF LY  +GLLDAM+QSMVYW+IGALADDS+TLSRYSGFYKGVQSAGAAV
Sbjct: 351 FKDSGIEFAGPFVLYMSYGLLDAMYQSMVYWLIGALADDSQTLSRYSGFYKGVQSAGAAV 410

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDE 105
           AWQVD   V  M QL+VNWSLTT+SYPLL++LV+  V +D  D+
Sbjct: 411 AWQVDTRKVPLMSQLIVNWSLTTVSYPLLVLLVYFYVKNDNDDD 454

[Close]

BLAST of Cucsat.G11870.T1 vs. ExPASy Swiss-Prot
Match: Q8LG53 (UNC93-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g18010 PE=2 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 9.2e-38
Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           FK+SG EF GPF LY  +GLLDAM+QSMVYW+IGALADDS+TLSRYSGFYKGVQSAGAAV
Sbjct: 351 FKDSGIEFAGPFVLYMSYGLLDAMYQSMVYWLIGALADDSQTLSRYSGFYKGVQSAGAAV 410

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDE 105
           AWQVD   V  M QL+VNWSLTT+SYPLL++LV+  V +D  D+
Sbjct: 411 AWQVDTRKVPLMSQLIVNWSLTTVSYPLLVLLVYFYVKNDNDDD 454

[Close]

BLAST of Cucsat.G11870.T1 vs. ExPASy Swiss-Prot
Match: Q9URX1 (UNC93-like protein C922.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC922.05c PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-13
Identity = 33/74 (44.59%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 8   FVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDNH 67
           + G  FLY  +G+LDA+FQS  YW+IG+L++D+  L+ Y GFYK +QSAGAA+ +++D  
Sbjct: 386 YTGYAFLYIFYGMLDAIFQSYAYWIIGSLSNDTNKLAVYMGFYKSLQSAGAAITYRMDTL 445

Query: 68  HVSFMRQLVVNWSL 82
           ++ +M      W+L
Sbjct: 446 NIPYMNYFASCWAL 459

[Close]

BLAST of Cucsat.G11870.T1 vs. NCBI nr
Match: XP_011653359.1 (UNC93-like protein 1 [Cucumis sativus] >XP_031739769.1 UNC93-like protein 1 [Cucumis sativus] >KGN53660.1 hypothetical protein Csa_014586 [Cucumis sativus])

HSP 1 Score: 238 bits (608), Expect = 1.25e-74
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV
Sbjct: 343 FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 402

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI 119
           AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI
Sbjct: 403 AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI 461

[Close]

BLAST of Cucsat.G11870.T1 vs. NCBI nr
Match: XP_008455612.1 (PREDICTED: UNC93-like protein 1 [Cucumis melo])

HSP 1 Score: 225 bits (574), Expect = 1.57e-69
Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           F+ESGS+FVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV
Sbjct: 343 FRESGSDFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 402

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI 119
           AWQVDNHHVSFM QLVVNWSLTTLSYPLL  LVFLAVNDDVHDEKK IDET KEVNSSI
Sbjct: 403 AWQVDNHHVSFMHQLVVNWSLTTLSYPLLWALVFLAVNDDVHDEKKLIDETPKEVNSSI 461

[Close]

BLAST of Cucsat.G11870.T1 vs. NCBI nr
Match: XP_038905867.1 (UNC93-like protein 1 [Benincasa hispida] >XP_038905868.1 UNC93-like protein 1 [Benincasa hispida] >XP_038905869.1 UNC93-like protein 1 [Benincasa hispida])

HSP 1 Score: 204 bits (519), Expect = 2.33e-61
Identity = 104/119 (87.39%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           FK+SGS+FVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV
Sbjct: 343 FKDSGSDFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 402

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI 119
           AWQ+D HH+SFM QL+VNWSLTTLSYPLL  LVFLAVNDD    KK IDET KEVNSSI
Sbjct: 403 AWQIDTHHISFMSQLLVNWSLTTLSYPLLGALVFLAVNDD----KKPIDETSKEVNSSI 457

[Close]

BLAST of Cucsat.G11870.T1 vs. NCBI nr
Match: XP_008455613.1 (PREDICTED: UNC93-like protein 1 [Cucumis melo] >KAA0045371.1 UNC93-like protein 1 [Cucumis melo var. makuwa] >TYJ96943.1 UNC93-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (512), Expect = 2.58e-60
Identity = 104/119 (87.39%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           FK+SGS+FVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKG+QSAGAAV
Sbjct: 343 FKDSGSDFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGLQSAGAAV 402

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI 119
           AWQ+D HHVSFM QLVVNWSLTTLSYPLL VLVFLAV +D    KK IDET KEVNSSI
Sbjct: 403 AWQIDTHHVSFMSQLVVNWSLTTLSYPLLGVLVFLAVEED----KKPIDETCKEVNSSI 457

[Close]

BLAST of Cucsat.G11870.T1 vs. NCBI nr
Match: XP_022985055.1 (UNC93-like protein 1 [Cucurbita maxima])

HSP 1 Score: 195 bits (495), Expect = 9.43e-58
Identity = 100/115 (86.96%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           FK+SGS+FVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV
Sbjct: 342 FKDSGSDFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 401

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEV 115
           AWQVD HHVSFM QLVVNWSLTTLSYPLL +LVFLAV DD     K  DET KEV
Sbjct: 402 AWQVDTHHVSFMSQLVVNWSLTTLSYPLLAILVFLAVKDDT----KPADETPKEV 452

[Close]

BLAST of Cucsat.G11870.T1 vs. ExPASy TrEMBL
Match: A0A0A0KVM5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097670 PE=3 SV=1)

HSP 1 Score: 238 bits (608), Expect = 6.06e-75
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV
Sbjct: 343 FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 402

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI 119
           AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI
Sbjct: 403 AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI 461

[Close]

BLAST of Cucsat.G11870.T1 vs. ExPASy TrEMBL
Match: A0A1S3C213 (UNC93-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495743 PE=3 SV=1)

HSP 1 Score: 225 bits (574), Expect = 7.61e-70
Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           F+ESGS+FVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV
Sbjct: 343 FRESGSDFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 402

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI 119
           AWQVDNHHVSFM QLVVNWSLTTLSYPLL  LVFLAVNDDVHDEKK IDET KEVNSSI
Sbjct: 403 AWQVDNHHVSFMHQLVVNWSLTTLSYPLLWALVFLAVNDDVHDEKKLIDETPKEVNSSI 461

[Close]

BLAST of Cucsat.G11870.T1 vs. ExPASy TrEMBL
Match: A0A5D3BCA6 (UNC93-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00530 PE=3 SV=1)

HSP 1 Score: 201 bits (512), Expect = 1.25e-60
Identity = 104/119 (87.39%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           FK+SGS+FVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKG+QSAGAAV
Sbjct: 343 FKDSGSDFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGLQSAGAAV 402

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI 119
           AWQ+D HHVSFM QLVVNWSLTTLSYPLL VLVFLAV +D    KK IDET KEVNSSI
Sbjct: 403 AWQIDTHHVSFMSQLVVNWSLTTLSYPLLGVLVFLAVEED----KKPIDETCKEVNSSI 457

[Close]

BLAST of Cucsat.G11870.T1 vs. ExPASy TrEMBL
Match: A0A1S3C2K5 (UNC93-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495744 PE=3 SV=1)

HSP 1 Score: 201 bits (512), Expect = 1.25e-60
Identity = 104/119 (87.39%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           FK+SGS+FVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKG+QSAGAAV
Sbjct: 343 FKDSGSDFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGLQSAGAAV 402

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEVNSSI 119
           AWQ+D HHVSFM QLVVNWSLTTLSYPLL VLVFLAV +D    KK IDET KEVNSSI
Sbjct: 403 AWQIDTHHVSFMSQLVVNWSLTTLSYPLLGVLVFLAVEED----KKPIDETCKEVNSSI 457

[Close]

BLAST of Cucsat.G11870.T1 vs. ExPASy TrEMBL
Match: A0A6J1JAA1 (UNC93-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483141 PE=3 SV=1)

HSP 1 Score: 195 bits (495), Expect = 4.57e-58
Identity = 100/115 (86.96%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 1   FKESGSEFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 60
           FK+SGS+FVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV
Sbjct: 342 FKDSGSDFVGPFFLYFCFGLLDAMFQSMVYWVIGALADDSETLSRYSGFYKGVQSAGAAV 401

Query: 61  AWQVDNHHVSFMRQLVVNWSLTTLSYPLLLVLVFLAVNDDVHDEKKFIDETRKEV 115
           AWQVD HHVSFM QLVVNWSLTTLSYPLL +LVFLAV DD     K  DET KEV
Sbjct: 402 AWQVDTHHVSFMSQLVVNWSLTTLSYPLLAILVFLAVKDDT----KPADETPKEV 452

The following BLAST results are available for this feature:

BLAST of Cucsat.G11870.T1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56WD3	9.2e-38	73.08	UNC93-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g18000 PE=2 SV=2	[more]
Q8LG53	9.2e-38	73.08	UNC93-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g18010 PE=2 SV=2	[more]
Q9URX1	2.7e-13	44.59	UNC93-like protein C922.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484...	[more]

BLAST of Cucsat.G11870.T1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653359.1	1.25e-74	100.00	UNC93-like protein 1 [Cucumis sativus] >XP_031739769.1 UNC93-like protein 1 [Cuc...	[more]
XP_008455612.1	1.57e-69	94.12	PREDICTED: UNC93-like protein 1 [Cucumis melo]	[more]
XP_038905867.1	2.33e-61	87.39	UNC93-like protein 1 [Benincasa hispida] >XP_038905868.1 UNC93-like protein 1 [B...	[more]
XP_008455613.1	2.58e-60	87.39	PREDICTED: UNC93-like protein 1 [Cucumis melo] >KAA0045371.1 UNC93-like protein ...	[more]
XP_022985055.1	9.43e-58	86.96	UNC93-like protein 1 [Cucurbita maxima]	[more]

BLAST of Cucsat.G11870.T1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVM5	6.06e-75	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097670 PE=3 SV=1	[more]
A0A1S3C213	7.61e-70	94.12	UNC93-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495743 PE=3 SV=1	[more]
A0A5D3BCA6	1.25e-60	87.39	UNC93-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220...	[more]
A0A1S3C2K5	1.25e-60	87.39	UNC93-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495744 PE=3 SV=1	[more]
A0A6J1JAA1	4.57e-58	86.96	UNC93-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483141 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23294	ET TRANSLATION PRODUCT-RELATED	coord: 1..103
None	No IPR available	PANTHER	PTHR23294:SF53	UNC93-LIKE PROTEIN 1	coord: 1..103
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 8..95

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G11870	Cucsat.G11870	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11870.T1.E1	Cucsat.G11870.T1.E1	exon
Cucsat.G11870.T1.E2	Cucsat.G11870.T1.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11870.T1.C2	Cucsat.G11870.T1.C2	CDS
Cucsat.G11870.T1.C1	Cucsat.G11870.T1.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11870.T1	Cucsat.G11870.T1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity