Cucsat.G11758.T7 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G11758.T7
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionRpr2 domain-containing protein
Locationctg1820: 4631619 .. 4636055 (+)
RNA-Seq ExpressionCucsat.G11758.T7
SyntenyCucsat.G11758.T7
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGTTCTCGCCCTCTTACCTCTACAACACTCACTCACACATGACACAACCCACACACTCCAATTGCTCTCTGGCAACCCCCACATACTCCAATTACAAAGAAAAAGTAAATGGAGTCCAACTTTTACATAAAATAATAGTCAATTATGTCATTTACGTGAAAAAAAAAAATATCATATAATCAAAACCTATTTATCGAAGCTATATGGATAGAAATCTCTAAATTTAGTACTAAAAAAACATCCCTAAATTGAACTACCAACACCAACCCATTTATTGAACTTCACAAAAGAAACTAAAATCTAACCACCAATGAATTACTAAGAGAAGCGCTTTGTTGGAGCAATGGCCTGATCCCAATGGGAACTCAAAAGAATCCCAATTTTGGAATTCATTTTCAAAACTCATCGAGAAATGGAGCAATCTCCGGCGGATTCTTCGACGACGAGTATCGAAACTGAATGTCAGATTCCAGCGACATCCCCAAATTCGACCACTTCTTCTGTCATTGAAGATTGCACCAAAACCCAATCTTCTTTGAGCCAAGCCCAGATTCTCAAAGCCATTGAAGTCGTTGAGAAGGACTCTCTCGCCATGGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTGCGCTCTGTTCTCTCCGAGGTTTTATAGTTTTCACATCCCTTTTCTTGTTTTCCTGTTTGATTTAACCAACTGAATTAGTACGTAGTTCAATTGCACATTTTTTTATTATCCAACTTCTAGTTCTTGCAGAGCATGTCCTATAATTGTGATATTTTCCATCTTTAATTGGGTTGCTTTTAATATGTTGAAGATGGAATAAAAACACTATTTTAGAATTTTTGAGTTCCACAACTTTACCAAATTTGATTATTAATGGTGAATCCTGACTTTGCCCGTCTTGTCATGCTGTTTATCTGACTGGGATTAGGATAATCTTGTAGGTCACCAGCAACTCGATTGATCATATGCATTGCTTCAACGATGCAGCAGGCCGCCTTCAAGAATCTGGTAAGTGAAACTGTGAAATAAAAAAGGGATGATTTTGACTGACAGGAATGGTCGAGTATATGGTAGTTAGATGTGTCATTGTCTACCACTGATGCTGCTAAACTTATTATATACATCTGGTCATTTTTGTGTATTAATCAAAATTCAATCTGTTCATTCATATGTTCCTTGTTCTGTTTGAGATGTGGTTGTTGAACTTAGTGATTGCCTTGAGATTGTATGTTATGTTACTGGGTTTTGTGCCGGTTTTTCATTATAAATTTGGAGAAGAGGTTGGTTGCAATCAGACTCGTGAAGACATAGAACTTCTTCAATGCAAAAGATATATGCAAGATGCACAAACTCTTAGCATTACATAGCTTTAGTCAGATTGTGTTCTATTGTGAATTTTAGTATAACAAAGGTCAAAGGTTATTCTACATTCCTCATAACTTTCATTCGTCATATCCACAGTTATCGTAGGTTGCTTCTATAATATTAACAAATACCCTTTTTATTTGATGATACTCCACATGAGTTTTTTGTACTTTCAACCCTGTAGTGCTTGATGCGGCAACAAAGGGCAATCGATACATTAATTCTTCCTTGAGGTATGCTTCAATATCTTCTGGTATCTCTTTTGTTCTGACTTAGTGTCCTTTGTTTTCTGTTTCTAGTTAAAGACTAATTCACTGTTGAATGAACCATATCATGATAGGACGAGCATAATTGTATTTTTGGTTCTTGAGATATAAGTTCCAATTTATTTGACGTCTGTGTTTCCTATGAATAATGCACAACTAGCAAAAATTAAAATTTTAACTCCATTTGTCAAAATGTGTTAACTCTGTGGATGCTGTAGCTTTTTACAACCTGCTGCATGAAATGATCAATGGAATTTCTTGAACCAAGTACAAGTCAGAGATCAGATTGAAACATACACATTAAAAAAGGTTTCTTCGTCCATAATTATAGTTTAATCTTTTGAGTTTTTTAGCAAAACCTATTATGCATTTTACCCAATTGTTACTTTAGAAACTGACGTTAGGTAAGTAATCATTAATGATAGCATTTTTATTCAACAATTAACTCCAGAAATTAAACAGTTCATTATGTTTGTTGATTTCTGTTTTATTCAATTGTAACAGAAATGATGCTTGAATATACGATGCCAGGTAGCTAAGTAACTATAAATATGTTACTTGGTACTTAAACTCATTGAAATTTTTTTTCTGAAAAAATTATTAAGAAATATTATTGTTATAGTAATCAAAATTGCAATTTGGACACTTTGAGAAGCTATTTGGTGTTTCTCTTTGTTATATGGGGAGTTAAGTCCCTTCATGAGTTCTCTGTTAGTTTGATTGTGTTCAAGTGTGGAAATTTTTTAAGGTTGCTTCAATAGATATTATTTATATATATATATAAAGAAAAAATAGGTGTTGGATGTCAGCCTCATACTACAAATCTGCTTAGCCATCGCATTGAACTCTCTTTTTTGCGTCTCTCATCTGATGGGAGCATAAGTTTTTGAGAATTTTTTATTTCCTTAACCACTAGGGTTTCACTTAATTAAGGCACTATTTTATGTGAAACATTTTTCTGGCTCCAATTTATATTTTGATGATTCTACTTGCCAAGTTCAGTATATTGGCGGAGTTGTGTTTGTCCTACTCCTATCAAAGATTAATCTGCGAAAACATTAGTAGATTACACGTAGGTATCTTTTTATTTGTACATAGGCTAAGTTATAAAAATACCCCTAAACTATGGTGCATGTTTCAATTATACCTTGAAATTTGGAAAGTTTCATTTTATCCCTTGAAGTTCCGGTTTCAAAACAAATCTTGAGATTTTTTCGTTAACTTCATGTACAAAAATGTTAGTTTTTACTTTTTTGTTGTTTATGTGAAGAAATTTAAACACACAAGAAGTAAATTTGGGATTAGTGTTAGCATAAGAAATCATAAATGAAAACACAAAAAAATTGGGGGGCGTGGGGATGTGGACAACTAAAGTGTTCATGCTTTCCACTTCTAACTTCACATACCATGAGTTGCCATCATATAACATATGACTAACTTATCTCTAAGATTATAGTTACAATGATGTTGTTATATTGATGACTGATAATGTTTTTTCCCCATCATGTGATAAGAATAATGCATGAAATAGAAAGATAGTAACAAAAGGGAAGGTGAAGCATCCCCATTGGCCAAAAGAGTTGTAATTACTCTTGGAAATACGGAGTGATAAATTATTCAACTAACATAGGATGATTTCTTGACACTTGCCCCTTGGAGACAAATGGACTTAAAAGTAGAAGCAAAAGAAGAGGAAAAAACTCAAAGATGATCCAATATTCTCTCACATTTGGCAAAGAATCCCCCAAGTGGGGGAGAAGAGAAAGTAAATTCAGATTCTTCTCTTCTATTCTATCCACAATACAGATCTTGTGTTAGGAACTGTTCAAAAGAAGAATCTAATCTATTAAGTATCTTCCACACCCAGAAAAACTTTGAAGTAACTGTTGGGAGACATTGGATTCTGCCATATAAATGCTTGGACAAGGAAGAGCGAGAGCAACTGTATAGGCCAGAGTTTTCAGGGCACAAGTTCCAAAGTTACTTGATCGAACATCTCTGTCAATGGGATTAACCTAGTTCATCTCTCTAATTCAAAACTTTTAAGATCTCGTTTAAACTGAAAATTCGTACTCCCTTCATTTCCATCACACACTTCTATACTATCTGTTGAGGATTAGTAAAACACAATTTTACATTCTAAAGATTTTCATCAATGTTTTTCTGTTCTAATTGAAGCTTACACCTTTTAAACAATCTTGAGGATCATGATTAGGACGGGTTGCAAACACCGTAACTTTGGATTATATTTTCTTGTTTTGCAGATTGAATCAGGAAATGAAAGGCATGGATAATCTAGCTGCTCAGCTGTATCCTTTCTATTTCATTCCTTCTTTTTTTACTTTTTTGTCATGCTCCCAGATTAGTTACATGCCTAGTAGATCATTCTAATGTTTCTTTATCTGGCTGTCATTTCCTCATGTTTCAATCCTCTGCATTACACAACTTCCTTGATTCTTGCTTAGAAAGGTTTTGAGGAAGAACGTGGATGAACTTGACTTGGCTGTGAACAAGCTCCTTAATTTTCCATGAGCTCCACTCGGTCGTATCGTGGCTCTTGCAAGCTCAAGGATTTTTATTTCCACCAAAGAGAGAATACAGTTCATGAAGAAAAAAATATTCATTCCATAGCTTCCTTCACATTTTACTCTAGGAAGCATCTCATTGCATGTTAGGTTCTTTGATGTATTTATCCAGAAATAGATTTTCTTGATCGCTTAATAATATATACTGGGTTTGTGGTTTCAATAGTTATAATGGTCTCTTTTCCTTGGAGGCTATTCAGCTTTTGAGAGTT

Coding sequence (CDS)

ATGGAGCAATCTCCGGCGGATTCTTCGACGACGAGTATCGAAACTGAATGTCAGATTCCAGCGACATCCCCAAATTCGACCACTTCTTCTGTCATTGAAGATTGCACCAAAACCCAATCTTCTTTGAGCCAAGCCCAGATTCTCAAAGCCATTGAAGTCGTTGAGAAGGACTCTCTCGCCATGGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTGCGCTCTGTTCTCTCCGAGGTCACCAGCAACTCGATTGATCATATGCATTGCTTCAACGATGCAGCAGGCCGCCTTCAAGAATCTGGTAAGTGA

Protein sequence

MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESGK
Homology
[Close]
BLAST of Cucsat.G11758.T7 vs. NCBI nr
Match: XP_004146523.1 (uncharacterized protein LOC101210623 [Cucumis sativus] >KGN53339.1 hypothetical protein Csa_015069 [Cucumis sativus])

HSP 1 Score: 183 bits (464), Expect = 4.38e-57
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100
           MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Sbjct: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100

[Close]
BLAST of Cucsat.G11758.T7 vs. NCBI nr
Match: TYK16633.1 (uncharacterized protein E5676_scaffold21G004610 [Cucumis melo var. makuwa])

HSP 1 Score: 175 bits (444), Expect = 1.55e-54
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100
           +AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Sbjct: 61  IAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100

[Close]
BLAST of Cucsat.G11758.T7 vs. NCBI nr
Match: KAA0044831.1 (uncharacterized protein E6C27_scaffold74G001230 [Cucumis melo var. makuwa])

HSP 1 Score: 175 bits (444), Expect = 2.66e-54
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100
           +AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Sbjct: 61  IAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100

[Close]
BLAST of Cucsat.G11758.T7 vs. NCBI nr
Match: XP_008452025.1 (PREDICTED: uncharacterized protein LOC103493156 [Cucumis melo])

HSP 1 Score: 175 bits (444), Expect = 4.87e-54
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100
           +AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Sbjct: 61  IAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100

[Close]
BLAST of Cucsat.G11758.T7 vs. NCBI nr
Match: XP_023553161.1 (uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140 bits (352), Expect = 5.45e-40
Identity = 82/105 (78.10%), Postives = 89/105 (84.76%), Query Frame = 0 

Query: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60
           MEQSP+DSST SIE   QIPATSPNS      T SV+EDCT+ +SSLS  +I KAI+VVE
Sbjct: 1   MEQSPSDSST-SIEPGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60

Query: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100
           KDSLA+AESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQES
Sbjct: 61  KDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQES 104

[Close]
BLAST of Cucsat.G11758.T7 vs. ExPASy TrEMBL
Match: A0A0A0KWT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048000 PE=4 SV=1)

HSP 1 Score: 183 bits (464), Expect = 2.12e-57
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100
           MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Sbjct: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100

[Close]
BLAST of Cucsat.G11758.T7 vs. ExPASy TrEMBL
Match: A0A5D3CXL4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004610 PE=4 SV=1)

HSP 1 Score: 175 bits (444), Expect = 7.49e-55
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100
           +AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Sbjct: 61  IAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100

[Close]
BLAST of Cucsat.G11758.T7 vs. ExPASy TrEMBL
Match: A0A5A7TTI6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001230 PE=4 SV=1)

HSP 1 Score: 175 bits (444), Expect = 1.29e-54
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100
           +AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Sbjct: 61  IAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100

[Close]
BLAST of Cucsat.G11758.T7 vs. ExPASy TrEMBL
Match: A0A1S3BTP0 (uncharacterized protein LOC103493156 OS=Cucumis melo OX=3656 GN=LOC103493156 PE=4 SV=1)

HSP 1 Score: 175 bits (444), Expect = 2.36e-54
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSVIEDCTKTQSSLSQAQILKAIEVVEKDSLA 60
           MEQSPADSSTTSIETECQIPATSPNSTTSS +EDCTKTQSSLSQ QIL+AIEVVEKDSLA
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNSTTSSDVEDCTKTQSSLSQTQILEAIEVVEKDSLA 60

Query: 61  MAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100
           +AESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES
Sbjct: 61  IAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100

[Close]
BLAST of Cucsat.G11758.T7 vs. ExPASy TrEMBL
Match: A0A6J1EUG1 (uncharacterized protein LOC111437668 OS=Cucurbita moschata OX=3662 GN=LOC111437668 PE=4 SV=1)

HSP 1 Score: 139 bits (349), Expect = 7.54e-40
Identity = 81/105 (77.14%), Postives = 89/105 (84.76%), Query Frame = 0 

Query: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60
           MEQSP+DSS+ SIE   QIPATSPNS      T SV+EDCT+ +SSLS  +I KAI+VVE
Sbjct: 1   MEQSPSDSSS-SIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60

Query: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQES 100
           KDSLA+AESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQES
Sbjct: 61  KDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQES 104

The following BLAST results are available for this feature:
BLAST of Cucsat.G11758.T7 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G11758.T7 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146523.14.38e-57100.00uncharacterized protein LOC101210623 [Cucumis sativus] >KGN53339.1 hypothetical ... [more]
TYK16633.11.55e-5495.00uncharacterized protein E5676_scaffold21G004610 [Cucumis melo var. makuwa][more]
KAA0044831.12.66e-5495.00uncharacterized protein E6C27_scaffold74G001230 [Cucumis melo var. makuwa][more]
XP_008452025.14.87e-5495.00PREDICTED: uncharacterized protein LOC103493156 [Cucumis melo][more]
XP_023553161.15.45e-4078.10uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo][more]
BLAST of Cucsat.G11758.T7 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWT22.12e-57100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048000 PE=4 SV=1[more]
A0A5D3CXL47.49e-5595.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TTI61.29e-5495.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3BTP02.36e-5495.00uncharacterized protein LOC103493156 OS=Cucumis melo OX=3656 GN=LOC103493156 PE=... [more]
A0A6J1EUG17.54e-4077.14uncharacterized protein LOC111437668 OS=Cucurbita moschata OX=3662 GN=LOC1114376... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR39708OS07G0483400 PROTEINcoord: 9..100

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G11758Cucsat.G11758gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G11758.T7.E1Cucsat.G11758.T7.E1exon
Cucsat.G11758.T7.E2Cucsat.G11758.T7.E2exon
Cucsat.G11758.T7.E3Cucsat.G11758.T7.E3exon
Cucsat.G11758.T7.E4Cucsat.G11758.T7.E4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G11758.T7.C1Cucsat.G11758.T7.C1CDS
Cucsat.G11758.T7.C2Cucsat.G11758.T7.C2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G11758.T7Cucsat.G11758.T7-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034470 ncRNA processing
cellular_component GO:1902494 catalytic complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:1990904 ribonucleoprotein complex