Cucsat.G11673.T36 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTCATATCTGTTTTTTTGTTTAAATGCAGTTGGACTCTGTTCGTGTTGCTGTTTGATTCTTTTCGCGTTTGGCGGCTCTCACTAATTAAACCACGCTCTGTTGTTATCCTGCTTTCCGTGAGGCAGGAAGCAATTTCTTCGAGCTCTACCTCCGGTCAGGGCTGGCGGTGACTTGTGGCGGTTGAGGTAAGTTCAGTTGTTGTTTTGTTGTACTTGGATGAGAATTGAGTTAGAATTTACATAATTTTAAATGTTCTTCCTTGTATTATCGTTCACCGTTAAGTCTGAATTCTCAAGGTTCTGCTCTTTAGTTTTCTGTAGTTTTTTTTTTGGGGCTGTGTTGCATAATCTGCGTTGAATTTAGCTCAATTTCGTTAGAACTTATTAGAAGCTTGTTAAATCCTTGGTTACTGAGAAAGATCGGCGCCTGAATGGATTTCTCTAAGCTCAAGAGAGCTGTTGGTTTTTTCAGTCAATCCTGATGAAATCATGTGAAACACAAAAGCGCTCTTGGTTTCTAATTCTAATTACTTTGTTTGGATCGGGATAATTTCAAGGAATCTCCAAATGAATGTTATCATGTCTTTCTAAATTGCCTATATGGGTCAGTGTTGAAATATGAGCGCCTTAATGTCGCTTCTTTCTTACGGTTATATTTGATAAGCGGTGCCAATTTACACGGGAAGGTTCGTTATCTCGGAAATGGAAACTTATTGGGGATCAATCAAGATTCTCGAAGTGGCCAGAATAGAATGGACAGTGTTGTTTTTAACTGTTTATTTATCTTATTTTTTCGTCTAACTTGTTCTGAATTCTGATATGCTTAAACACATCAGATTTTAACGAGTGGGTCCCATCATGATCGTACTCACAGTATATTCGTTTGTTTCTACTTTTACGTGGTTGGATTTTGACCATTAGTAGGCCAGCTTCTCTTACATCTCAGGATGCAACTTTTTCTTCTAATAAAACGCATAATATCTTGTTAAAGAATCAGACACTAGTTCCAGTAATATTTTTCATTTTCTGATGTCAAACGACTATCAGATTCCTATATTGTTCCTCTTGTTTTGCTTATGAGATAATTCCACAAGTAACTTGAGTACTAGACAAACTCATACGACTGGGTGTGTCCAAAATTGACTACTTCTACTTCTTCTTCTTCTTCCTTTTTAATGACAGAGATTTTACTTGTTGGATCAGAAGTTGAACATAATATAAGTCGTGATGACTTGTTTCTGTTTTGGTTCAAAAAGAAATAGTGATTCGTCGGTTGCACAAACAATTGCAGTAGTTGAAGGTATGCTAGTTTAGATTGATATAGCACAACTGATTCTGCAATAATTTATGATGGCTGTTGTATGAGATACTTGGCAAGAACTTTGGCTGCATTACCCTTCTATCACAGCACCAAGAACACAAGTTTTTGCTTAAATGAATAGGTCTACACTGATGAAAGAGGATCTAACACACCAGTAATCAATGGCTTCCTTATATGTAATTTTTGTCAAATTTCTCGAAATTTTTTGGTGTAACCTTGCTTTAAGTGCAGCATAGATGACCATCGTTATTGGATGCTTGAAATCATAGTTACAACCTTCTGTTGTTAAGAAAAAGGAAAGGTCTGTTGATAAAAAATGGGCACTGTTGTCTGAGTCCAAAATTTTAATAAGAGAAGAAAAACGAATTTCATTCTTTTTATCTCTCTTTCTCACTGCTCTTATGTGGCAGTGTTTCTCTACGAGTATATGAGGACTCAATTTCAAATTGTTTACTAGAAAGATTTATTTTTCGTAGGAAAAACTCTTCGAACAAAGTTCTGCCATGAACATCTTGTCTCTACATTAATTTTTCTCATGTTCTCTTTTATCCTCTTTTTGTGGAAAAATTGCAATTTGTAACTGCATCCTCCCACAATTATACTAAACGGCTCAAATTTTCTATATCCTTATTTGTCTAATGTGCCTGCACTCTGTCTTCAATTTTGATGTTAAAATTAGATTAAATTTCTCTTTTTTCCTCTTCTTCTTTATGAAGTCAAGCTGTTTCATGGTCTGTCGTTTGAAGAAAATTTGAAAACAAGATCTGGTTTCATGATGATGAAGAGATAACAAATCATCAAAATTAGTCATATTCTCTGGGCACTGAAATTTTTTCATGGCCATATGATTTGAACTTTTTAAATGACGTTGTTTAAGCTCTATAATTGATACAGAGATTTCAAATATTCCGAACGTTCGGTTGTACTCATACAAAGAACTTAGAAAAGCAACTGAAAATTTCAGGTCTGAAAACAAACTTGGACAGGGAGGTTTTGGATCTGTCTACAAGGTACAGCTGAAGCAGCTTCTTGTGGTTTCTTGCTGATAACTAATGTCCAAAAGTTATTTCTTCAGCTCCGTTGGTACTGAGTTCTGTTTTGAACTATTTCACTTGAGCAGGGAAGGCTTGGAAATGGAACTTTGGCTGCCATAAAGGTACTATCCATGGATTCAAGCCAAGGGACACGTGAATTTTTGGCAGAAATCAATGTGATCTCAGTTATAAATCATGATAACCTGGTTAAGTTGCATGGTTGTTGTGTGGAAGGGCAGCACCGGATCCTGGTCTATCCTTACCTAGAAAATAGCAGTCTTGACAAGATGCTTTTTGGTGGTTAAATATCCTGTTTTGTTTTATTCTCTCAGTTCTGTACTTTTTTCACAAACAACTTATTCTAATGGACCTTCATACAATAGGTAGAGGACATAGGAATATTCAATTCAATTGGCAAACAAGGTGTAAAATATGCATTGGCGTTGCACAGGGGCTAGCGTTCCTTCATGAGGAAGTTCAGCCGCATGTTATACACAGAGACATCAAGGCAAGCAATATCCTGCTTGATAAGGATTTAAACCCAAAAATTTCTGATTTTGGTCTTGCTAGACTACTCCCTGCTAACTTGACTCATGTTAGTACACGTGTTGCCGGGACAGTGTAAGTTGTCCATGCTAGTGATGTTAAATTTTTAATCTCAGAACATTGCAGAGCTAAATCCTCTGAAAATGATATTTAGTCTCCCTATGTTATTTAGTATCTTTTTTCTGAAAAGCTTTGTGATGATGACTGTTTCTGTTTGGAGTCTTCATGTACTATATTTCTGTTACTGCTCTTGTGTTGCATTAAGTTCTGTTCAAGTCTGGAGGAAGGTTTATCTTGTTTGTATATTAAACATTCATACAAGACGGTATGCAATTAGCAATGTGTATCAAAGAATCTAAACAGATATACTGACTACATATGTTTGTAGAAGTTCATACTTTTGGTCATAAAAAAATTTATGATCTAATTGAAATTTGCAATGATAGTAAAAGGTGATGCTGACAAATTGTATGTTCTATGCTAGTTCCTGGTATGTGTTCTCTTAGGAGTCAGAACATTTCCTCCATTTTCCTTTTTAACACCCAAATAATTTTAACCCTTATTTGTGCATTGAGTTTGAATTAGAAGCAATTGTCTAACCTTGGGATATTCAGACTATAGTAACTAAACAAGGTATGAAACGATCTGACAGACCTCTTGCTTATCAAGAGAACTTCTGCTTCCACTAACCTTAGTTCTCCCTGTTTTTAACCACAAATTCTGACAAGCTGACACTTATTATCGAGTCTTGCAACCTCCCCTTGCAAACTTACCAGTTTTACTTTCTTTTGGGAAAAAAAATGTTAAAACTAACTCTTTTGCTGTATTGTTTATGAAGAGGTTATCTTGCACCTGAATTTGCCATACGGGGACAAGCGACAAGAAGAACAGATATTTATAGTTTTGGTGTCTTACTTTTGGAAATTGTTTGTGGGAGGTACAACATAAATAGACGGTTACCTGCTGAAGAACCGTATCTTCTTGAAATGGTATGCTTCAGTTGCTGTTTTAAATGAAAATAAAAAGTGGGAAGGGATGTAGTTGGAGTTGACTGTACAACTCAAATGAAAAACCTTCCATAACTGAGCATTTCTTGTAATTGATACCAAATTACTTTATAAACATGTGCACTAACTTGATCATGATGGGCATCAAAATCTAGCCAACGAGACTGTATTAGTGTTACTCTATGGTTTGTTGAACTTCTAGATTCCTTCCATGTTTTTGCCCCCAAAGATGGACATAGTAGTGCTTTTAAAACCTACCCATCCTCAGCCGTAAGAATCCAAAATTTTATTGTATTTTGCTATGTATATTGCCCTTGAGTGCAGTATTATAGTTTCTAAAATGCGTTCCAATATTTGTTCAAAACTTAAGGTAAACAGTCCCTTCTTCTGGCATTGGATGTAATATTAAATTCAGACTTCAACTAAAACAAAAATGAAATCATAGTCTAAATATCCAGCAAAATATTTACATTACATTTTTTAGTTGAATTTTCTAGAAAGTTGGGTGTTATCATTGACCATGCTATTATCCCTTAAGTTCCAGGATCATTCTCTTCGGGTAATACATGATTGAATATTTTTATCAAGATTGATAGGTTCACATATATATATTTCAGTACTTCGGCTTTTGCTTCTAGTTCTCTTTCCCTAGGCCTCAAGGTCTGTGCTTTCGTTTGTTTATTTTTAACGCTCCATGCATCTGCATCTGCTTGTTGATTTATATATAACAACGGAATTTGGAGAGCAGAGGAAAATCTATTTATTTTAAGAAGAATTATACTTATCCCTATAAATTTTGATGAGCAAGGATGGAAATATTGAAGCATATGGGTAGAACCTGCATCCTTTTGCAATAAAATGTGAAGAAAATATTTTATCATGCAATGGCTATTTTTGGAATATTTTGTTCTTCTATGCTAAATGTGCTGGTAATTCTAACAATAGATGTAAATGCTACAGGTGTGGGAGCATCATGAGAAAGGGCAATTGTTGGAATTGGTAGACATATCATTACGTCAAGACTTTGTGACGGAGCAGGCCTGTAGATACTTAAAAATCGGTCTTCTCTGCACCCAAGATATGCCAAAACTCCGGCCATCTATGGCTACTGTTGTCAAGATGCTAACGGGTGAAATCGATATATCTGATCAAACAATATCTAGACCAGGAATGCTTTCAGAGTTCATGCTTCGAAAAGATGTACTATGCAAGAAAGGTGAGTCAACAGCTGAAGACTCAGGAAAGCCAATTGATTCAACTTCATCATCAAGACACATGGACACCTCATATGCTACGATAACCTTCGATTCAATATTTGATCGTAGTAACTGAGTTATAAATTATTTGTTGGTTAGCAAGCCTTCTAATTAACGGGAGGTATATATTTATTTTTTTGTTCTATCATGAATACATGAATTCTATTCTACTATTGGCACTTTTTCCACTTTCATGTGTCAGTATCTAACCTTGTCATTGTAGGAGTTTTTAGTGATGAATTTTCATTGAAAATCACATGACGTGTTGTGTTCTCGAGGTGTATATCGAACTATTCTTTGTATTTTTGGTCCTGTTAGTATGAACAAATGTATCAATATTTGCATGTAAAGGATATGAAGCTGCTTGGTGTGTTGTGCATTTTGATTGTTTGATCTCTCTCTCCCTTTCCCTCTTTTTAGACAAAGAACAAGAGAAACTCAAATACAAATCCCAAAGATGAAACCACAACCAAATGTTTACCAAAAAAACAGAAGCTTATTTCTTTCTCAAATCAAATGAATCTCTTAAAAGATGAACCAAGTACTTCCTCACTATTAAGATATATAGGATCTGCATGGAATGTGCTTTGTGTATCTTATTACTTTTTT ATGAGGAAGTTCAGCCGCATGTTATACACAGAGACATCAAGAGGTTATCTTGCACCTGAATTTGCCATACGGGGACAAGCGACAAGAAGAACAGATATTTATAGTTTTGGTGTCTTACTTTTGGAAATTGTTTGTGGGAGGTACAACATAAATAGACGGTTACCTGCTGAAGAACCGTATCTTCTTGAAATGGTGTGGGAGCATCATGAGAAAGGGCAATTGTTGGAATTGGTAGACATATCATTACGTCAAGACTTTGTGACGGAGCAGGCCTGTAGATACTTAAAAATCGGTCTTCTCTGCACCCAAGATATGCCAAAACTCCGGCCATCTATGGCTACTGTTGTCAAGATGCTAACGGGTGAAATCGATATATCTGATCAAACAATATCTAGACCAGGAATGCTTTCAGAGTTCATGCTTCGAAAAGATGTACTATGCAAGAAAGGTGAGTCAACAGCTGAAGACTCAGGAAAGCCAATTGATTCAACTTCATCATCAAGACACATGGACACCTCATATGCTACGATAACCTTCGATTCAATATTTGATCGTAGTAACTGA MRKFSRMLYTETSRGYLAPEFAIRGQATRRTDIYSFGVLLLEIVCGRYNINRRLPAEEPYLLEMVWEHHEKGQLLELVDISLRQDFVTEQACRYLKIGLLCTQDMPKLRPSMATVVKMLTGEIDISDQTISRPGMLSEFMLRKDVLCKKGESTAEDSGKPIDSTSSSRHMDTSYATITFDSIFDRSN Homology
BLAST of Cucsat.G11673.T36 vs. ExPASy Swiss-Prot
Match: Q93YN1 (Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.3e-43 Identity = 93/166 (56.02%), Postives = 119/166 (71.69%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. ExPASy Swiss-Prot
Match: C0LGH2 (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana OX=3702 GN=At1g56130 PE=2 SV=2) HSP 1 Score: 123.6 bits (309), Expect = 2.3e-27 Identity = 63/125 (50.40%), Postives = 86/125 (68.80%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. ExPASy Swiss-Prot
Match: C0LGH3 (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2) HSP 1 Score: 122.5 bits (306), Expect = 5.1e-27 Identity = 69/154 (44.81%), Postives = 100/154 (64.94%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. ExPASy Swiss-Prot
Match: C0LGG8 (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana OX=3702 GN=At1g53430 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.0e-24 Identity = 65/163 (39.88%), Postives = 92/163 (56.44%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. ExPASy Swiss-Prot
Match: C0LGG9 (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 9.1e-24 Identity = 57/118 (48.31%), Postives = 74/118 (62.71%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. NCBI nr
Match: XP_004137242.1 (cold-responsive protein kinase 1 isoform X2 [Cucumis sativus] >KAE8649253.1 hypothetical protein Csa_014647 [Cucumis sativus]) HSP 1 Score: 346 bits (887), Expect = 1.39e-116 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. NCBI nr
Match: XP_011653284.1 (cold-responsive protein kinase 1 isoform X1 [Cucumis sativus] >XP_031739797.1 cold-responsive protein kinase 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 346 bits (887), Expect = 1.43e-116 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. NCBI nr
Match: XP_038883318.1 (cold-responsive protein kinase 1-like isoform X6 [Benincasa hispida]) HSP 1 Score: 321 bits (823), Expect = 7.36e-107 Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. NCBI nr
Match: XP_038883312.1 (cold-responsive protein kinase 1-like isoform X5 [Benincasa hispida]) HSP 1 Score: 321 bits (823), Expect = 8.63e-107 Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. NCBI nr
Match: XP_038883295.1 (cold-responsive protein kinase 1-like isoform X3 [Benincasa hispida]) HSP 1 Score: 321 bits (823), Expect = 1.26e-106 Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. ExPASy TrEMBL
Match: A0A0A0KVI8 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G082350 PE=3 SV=1) HSP 1 Score: 346 bits (887), Expect = 1.13e-116 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. ExPASy TrEMBL
Match: A0A5A7V719 (Putative serine/threonine-protein kinase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001520 PE=3 SV=1) HSP 1 Score: 315 bits (807), Expect = 7.60e-105 Identity = 162/173 (93.64%), Postives = 164/173 (94.80%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. ExPASy TrEMBL
Match: A0A1S3BSB4 (putative serine/threonine-protein kinase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492957 PE=3 SV=1) HSP 1 Score: 313 bits (803), Expect = 2.98e-104 Identity = 161/173 (93.06%), Postives = 164/173 (94.80%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. ExPASy TrEMBL
Match: A0A1S4DZ02 (putative serine/threonine-protein kinase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492957 PE=3 SV=1) HSP 1 Score: 313 bits (803), Expect = 3.07e-104 Identity = 161/173 (93.06%), Postives = 164/173 (94.80%), Query Frame = 0
BLAST of Cucsat.G11673.T36 vs. ExPASy TrEMBL
Match: A0A5D3D1I0 (Putative serine/threonine-protein kinase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00860 PE=3 SV=1) HSP 1 Score: 313 bits (803), Expect = 3.07e-104 Identity = 161/173 (93.06%), Postives = 164/173 (94.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|