Cucsat.G11580.T8 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G11580.T8
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	MADS-box transcription factor 1
Location	ctg1820: 625056 .. 633354 (+)
RNA-Seq Expression	Cucsat.G11580.T8
Synteny	Cucsat.G11580.T8

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGTAGAAACAAGAAGAAGAGCCCTAACCCTGACTTCTTCACATTATTTCTGGGTGAAGATTGGAAATTTTCAACTTCTTAAAACCCAAACAAACAACAACAGCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGAAACAAAACCAACCAACACCCCCCCCAAAAAAAAACTTCAATTCTATTTTTTATTTTCAAAGACCTCATCTTATTAGGGTTTTTTTTTTTTTTCTTTTTCTTTTCTGAAATCCCAAAAACAGAGTATCACAAAGTTAGCTACACTTGGAGGGTACCAGCAGAGGAAAGAAAAGAGGGATAATCAAGAAGGAAGAAAGGATTTTTGGGGTAAGAAAAAAAAAACAAATAAGAAAGGGAGTTTGGAGATTTAGGGTAAATAATTGAAAGAGGGAAGAGGTGAGTTGGAGGGGTGGGGATTTTTTTATTGACAAAAAAGAACAAAAAGAAGGAAAGAAAAAAGGAAAAAGGAAAGAAAAGAAAAAAAAAAAGAATGGGAAGAGGAAGAGTAGAGTTGAAGAGGATAGAGAACAAAATAAACAGACAAGTAACATTTGCAAAGAGAAGAAATGGGCTTTTGAAGAAAGCTTATGAACTTTCTGTTCTTTGTGATGCTGAAGTTGCTCTTATCATCTTCTCAAATCGTGGCAAGCTCTATGAATTCTGTAGTACTTCCAAGTATATTCTCTATCTCCTTCTATTTTATTTTATCTTTCTTCTAGGGTTTGGGTTTTTTCTTTTCTAATCTTAGATGAGAAGAATTTGGAGATTTTAATGATGTATATAGTTGTAATATGGGTTGTTATGTGCGTTTGGATCCATATCAGTATGCTTAAAACGCTGGAGAGGTACCAAAAATGCAGTTATGGAGCGGTGGAGGTTACAAAACCGGCTAAAGAACTCGAGGTTAATTTTACATTTTTTCTTTGTTCAAGTTTTTATAAAAATCTTTTGAAATTTAGATCTTGATTTGATTTTTGGTTTATGGTTTTTTTGGGGTTTATTTTTGCAGAGTAGTTATAGAGAGTACTTGAAGCTGAAGTCTAGGTTTGAGTCTCTACAAAGAACTCAGAGGTAAATATTTTAACCATTTTTTTCTTGCCATAATATTTCTTTTTCTTCAATTATATATCTAAATAATCAGATAATTTACCTAATTATTGGAAACCATTTTAGTTTTGGTAGTTTTTTTAAAAGTTTTTTATAAATAAAACCATCAACACTTGTTTCACTTTTGATTTCTTTCTTTCTTTCTTTCTTTTTTTAAAAAAATCAAGCCAAAATTTAAAAATTAAAATGATAGTTTCTATAAATTTGTTTTTGTTTTTTTGAATTTGGCCAATAATTTGACTCTTTGGCCTAAGAAATTTGCAACTTATTGTAAGAAATTAAAAGAAAAGAAAAGAAAATTTAATTTTTGAAATATAAAAGTAAAAAAAGAAAAAAATATATTTATCGAATAGAGTCTTAGTAACATTTTAAAATAGAAATTACCTTTAATAGTGAAAGTTTTATCTAAAAAACAAATAATATTTACATACAAATTATTGTAGATAGTTAATTCAAATTACAAAACTTGAACTATGTAAGAAACCTAAACCAGCTAACTGCAGATCTATTTGGAATCTAATTTGCTTCTTTATTTATTTAATTAGTAATGTTTAAACTTGTTTATTTCTGAAGCTCGTTTTATAAATGTGAATTACTCATTTTCAAGGTTTTTGTTCTTGAAATCTAGAACAGATTTTAAAAAATGTCTATATATAATAAAGAAGAAAATTGATGGTAAGATTTTCTTTGAGAATATTTTCATTTAAAATGGTTTCTTTACAAGTCTATTTTTGTTTCCAAAACTATTTTCAAAAGAATTTTTGAAATAGTGATCAAATGTAGCTCTAAACATTAATACTGTCCTATATATATATATATAAAAGTAAAATTTAAAAGGAAACCACCATATAAAGGAAAGATACATCTCAACATATCCAATGGTCATGAGAGTGTGGTTACCATATTTGTGTTTTGGTCATTCATAATGTTCTTGGTTTTGTAAACTTGTATATTTTCTTATTGAGAGTGGTCTCATGTAAAAGGATGGGTGGATTTGAATTATTAAGCCCTTCCTTGGAAATCATTTTGTTTTTTAGGTTTGATTTTTGAAAATTAAGCTTTATTTTTTTAAAATTTTCTCACCGCAATAAGCTTGCCAAGTAATTCTATATATAAACAAGTTCTAAAGAAATATGTATATATATTTCAAATTTTGGTTTTTTTTACGATGGACAGAAAGTAGATAGCAAAACAAGAAATTTAGAGTTTGAATGAGTGTTTATAGGTTTAATTTTCAAAGACTAAAAATAAAAGTTCTAATAGTAACCAAAGGCGGGTGCATAAACGTTTCCAAAGTTGTTTAAAAGAGTTTATTTGTAATTCATGTTTGATATAGTTCTTGACAACGGAATGTTGGGCGAAGTAGTTGACGAATATAAAAAGGGCAAAAATCTTTGTTAGAGATGATGAAATCTAGGGTTCTCATTATAAAGCCTCATTTTAAAGTTGTTCAACTAATTATATAAAAGTTGATTAATCAAATGTATTAAATTTCCTGAAAGACTTTTGAGGTTAATTCTAAATAATATGCATACTCTCATAGTAAAAAACGAAGATTTACCTCTAAGTTACAATTAAGATAAACATGAACATGCTGATCTCTCACATTTGTCTATAGAGAAATAGGTATGCTCAAGAATGCTTATAGAATAAACCTCTTAGGCAAAAGCACATTGATTATAACCACTTTTAATAACAAAGAAAATGTTTAGATTAAGGCCTTTCTTGGGCAAAATTCAGTTTTTATATATTAAAAGTACTTTCTAAACAAACATATCTGCACCCAAAACCACTCTCCAAGTTCTTCTTTACAAGATAATTGCAATTACATTAGACTTTTTTGGATAGTACTTTTATGGTTACATGGAAAGCAAGAAATTTTTTAAGAGAAAAGTAGTTTGAAACCATACAAAAATGATTTTGACCAAACCAAAACCATATAATTGCTAAGGTTAAAAAAATTTATTTGTGTTTATGGCAGAAACCTTCTTGGGGAGGACTTGGGTCCATTGAACTCAAAAGAGCTTGAGCAGCTGGAGCGTCAGCTTGAGTCTTCTTTGAAGCAAGTTAGGTCTACCAAGGTAGGTTTAATCCTTTCCGATAATGACTGTTTTGATCTATTGTTTGATAGTTATTTGGTTTTTGAAAAATTAACTTTATAAATATACATTCTTCTTTTGAAAGAGTTATTTTAAACTTGTGTAAAGTTTTTAACGAAAAAAATAGTTCTTGAAAACCTTTTTTTTAAAAAAATTGTTTAAGACTTCTAAAGTCTAAAATGATAAAAAAAAAAAAAACTCTTGAATGACAATTGAAAAAACCAAAAACCAAAATTAAAGGCCTATTTGATATAAACTTTTCGTTTTTAATTTTCTGCATTATTCAAATTTGAAAACTAAAATCAAGTTTTTAAAAACTAAATAAGTTTATAGTTTTAAAAACTTTTCCCAGTTTTGAAACAAAAGTAGATAATAAAACTAAGAAACTTATAGGTATGGTTTATAAACGTGAGTTCAAATTGTGCTGGAAATAAATTTAGTTTATTTATTTCACCAATAACTACTTTTTAAAAAGTATGATTTTGGGTGATGAGCCAAGTAGATATACAAAATCTCATAGTATTTTGATGAAATATTATGGTTGAAGTATCAATTAATATGCAATAGTTTTTGTTATTTGTTGCCAACTTTTTAGAATTGGGTTTGTTTGATTTTAGTTTATTAAATTTGTATAAATTCTTGAAAGTTAATTTTTTTCTCCAATTCGATTTTAGTTTCTTATTTTTCAAAACATCAACATATTTGCTTCTTCATTCTGCTTTTACTCATAAAATGGATATATAATATGCCAACAATAAGTACACAACTATTTCGATATTCTGAAGGATTAATTTTCCAATAACTTCTTTTTGTCTACAATGTTTTAAAACTAACGCATAGTTTTAATTACATAGAGAAACCTAAATTTATATGAATGTTCATTTAGATTATAGATTTAAAAGTTTCATATTCAAACTTTACAGATTAAATACTTTTTTGGACATCTTAATACAAATCATTTATTCATTTAAAACTTTTGATTTTTTTGTTTTTCTAATTTGGTTTTGTATACTTTTAATGATATTTTGGAGTGACTACGACTTTAATCTCTTAACACTCCAATATATTGAAGAAAATAGGTTTGGGAATTTTTGGAGTACAAGTTCTCATAATATTTTTAATGGTTTTAATATACTGTTCATGAAATTGTTGTTTGAATTTAAGTGATAGATGTTAAATGGACAACATTTTCACTATCTATAATAGATAAAAGATTATCTAAGAAATGACTTTTCATATCTACTTGATTGTTTGTTTTATTGTTTACCTTTTCTCAATATTTTCAAAATATAAGTCAAATTTTGAAAATTAGGTTTCATTTGATTACCATTACTTCTCTGCATGTTGATTTCCTTGGGTTGTTTATTATTATTTTGTTTTGCATTCCTAAATACCAAAGTAAGCAAACTAGGCAAAAGGCAAAGTTGTTTTTAGAATTTGGAATTTTACTATGAATTCATTTGTTTATTTAGGAAAGATGATAAAACTATTATAAAAAATGTTGCAATAAAATAAGCATAATTTTCAGGAAAAAAAAATCAAAAAGACAAATGTGCCTAAAAAATAGTTTTTAGAAATTTGTTGTTTTTACTTTCTATATTTAGAATGTGGCCATGAATTCTACTGTTTAACTTTGTGGAAGGATGAAACTCATGATTAAGAAATTGTGAGAAATCAAATATAATTTTGCAATCTAAATGCCAACAAACGTAAAAACATGTTTTATAAGCTTATTTCTTTATTTTGTTTTTCGTCTAGTTTTCTCTATCATCTTTCTTAAGTTAAAGAGTTGAGTTCTTGAGGATATATGAACACAGTTGAGATGTGCATCCTCCCTTCCATTTATTTAGTTTTTTTTTTTTTTTTTTTTTTTTAAAAAGGATAAAAGTTAATTTTTTAGTCAAATTTGAAAAACAAGAACAAACATTTAAAACAACTTCGTTTAATTTTTAAATTTTGGTTTGGTTTTAAAAACAGCCTTTAATCTAATCAACCAAATTTAAAAATCAGTAGAAGAATGGTTAGTAGGTGAATGTTTAGATTTTTAGTTTTGAAAATTACTTATTTTCTGCCAATTTCTTATATATGCTTGCACCTTCTTCCTTAAATGAAGAAGTAACTACTGAGAATAAAAAAATAAACTAATTAGTTTTTAGTTTTCAAAACTTTTGCTTGGTTTTTTGAAATACTAGTAAGAAGATAACGATGGGAGGAAGGAGTGTTTATAGTCAATTTTTAAAAACTAAAATATAAAAACTCAAATGTTAACCAAAAAGGTTTCAAGTAGTTATCTAATGAACCAAAGTAATTACCTTGATTTGAATTAGTAATTCTTAGTAGCTATTTTGTATTTTTGCTTTTGAAAATTAAACTCATTGACACCTCTTTTATCTTTTTTTTTTTCCTGATTTAAAAAATCAAGGTAAAGTGTGAAAACTAAGAAATGTTATTGAACTTTTATTTTAATTCTTGAACTTAAGTCTGAACGTCTTGTCTCTAACAGTATCTATGTGGCTGTGGTGTGTCTCTGTCCATTTAAAAGACAATTATTGAAGCTTTTCACTTTTGTACTTTGAATATGCTTAACCAGAATCTGGCAGTTTAGTACACTATCCAGTTGCTCTGTTTCTTAATTAATACCCTTATTAAACTTCCACTTCTTTTTGTTTTTAACCACAAGTTTTATAGCTACAAAGTTCAACGCACTCTTTTAACTTATGGCTTTTATGGGAAATCTGTTTTACTCAGCTGTAGAATTGATCTTGATAAGATTATTCAAACGTTGTAGTTTGTGTAAATTGGTGTTTAGTTTTGAGCTTATTATTTTAATCTGACACTACCAGTATTAAAAAGATTCAATTGCAATTTTACTCCCTGTAGTGTTGGCCAAATAGTTTGTCTTAAAAGTTAAGAATCTAGCATTTTGATTCAATAAAGCCTTCAAATGATCCTTATGATTTGATAAAATCATATCACAAATAGTCTTTTACTATAAGAGTTACTTATGAGGCTTCATCAAACCAAACCGTAGGGACTGTCTGTTTAAATGATTAGAAACTATTTTATAATTTAACCTATTGAAAACTACTTATACAACTTCTTTCCAAACAAATGCTTTTGTTTGTGCGTGGTGATATTTTTATATGTATTTGAGCTCTTAGATATGTATGGCTAGTTAGTTCCATTTTTCTGTGGCTTCATTGTTGAGCTTCTTTTTAGGTAAAACTATTTATTGAATGTCTCATCATAACGGTTGAATGTAGATTCTTAAACATGCATGCAAGTTTCTAATAACTATTACAGTTTTTCACTCCAAGTTTCTCCATAAAAGCAAATGTTTGACTGAAAAAAGAAGTACACAAGGCTAGTATATGACCCAAACTCCTCTTTATTAGCTGATATACAATTAAATTTATGTTCACCTATTAGCTTATGCTTTTTAGTCAAGAGGTGATTAAAGACTCTTTGGACCTATATCTTATGTGATCTTAAGAAAACCTAGGTTTATGTACTTTGTAAATCAATGTATGAACAAAACACTAATTGTTCTTTTTTTTAAAAAAAATATTTTGTGATTGACTAGTCGTTATCTTAGCTAAGGACATGTATAATTTGTCAATTATGACCAAATTGTTGAAAATTTGGAACTTTGCAGACTCAGTACATGCTGGACCAACTATCTGATCTTCAGAACAAGGTAGGTTGAGTTCATATCAAGTTTTAATGGTGAATTCAAAATCATTTTGTTGAGCTATAATATATATATATATATATTTATCCTAAGTTTTAAAATCTTTTGTCAAGTACAGGAACAAATGCTGATTGAAACTAACAGAGCTCTGCAAATAAAGGTAATTAATCAACATTTCTTTTCCTAAGACAGCCTAAACTTGAAATTTACTGATTCTCAAACTTTAAGAAGAAGAAGAAAAAAAAGAAAACATCTGTCTGCCTTATGGGACATTAGTGAAGTTTCCATTGTGTAACAGTTTTAAGGTATGTTTGAGAATATTTGAAAGTCTATACTTGAATTGTCTCGCAGTCCTAATGTTGATGTATTTATCTCTTGCTCTGGAAAACATTTGTTAAATCCCATCTACTTAATGGTGAAATTAATGATGGAAACTTAAAAAAATCATATCATATATGTTAAATGATGAAAATATCTTTCTCCAATTTAAAATAAGCATAAATTTCTTAAAAGTAGTGATATCTTTGTTATATATTGTGAGGAGTATTTAATATTAGAATGGAAATGTTGATGTATACTTCACATCGTTGTCAAATCTATAGAAACATGTAGACAATATGGTGGGCATTATGTTGATTGAAAAAACTAAGATGATTATGAATTAGAGTATTAACGGAGATGTTTGCGTTGGTCTTGTGTAATAATGTATGGTTGATCAGCTGGAAGAAATAAGTTCAAGAAATAATATAAGGCTTACATGGGATGGTGGAGATCAAAGCATGTCATATGGTCCACAAAATGCCCAAACTCAAGGCTTCTTTCAGCCACTGGAATGCAACCCCACTTTGCAAATTGGGTAACATTTTTTTTAATGAATTTAAATTATGGTTCTTTGTTGTTTTTGGGTAAGTAATTTGATGTTGGGTTTTAAATAGGTACACTTCTGCAGTATCAGACCAAATTACAAGCACTACTACTCCAACTCATGCCCAACAAGTCAATGGCTTCCTCCCTGGTTGGATGCTTTGATTGAACAAACAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAAAACCTCTCTTTCTTCTACTTTTTGTTGCTTACTTTTCTTTTTTTCATTTGCGCTATGGTACTAACACTATGCATAATTGTTAATAAGCATTATATTATTTTACTTTTATTTTAGAACTTGAAAGAAAATCCCAAAAATTTGAAGGAGGACTTGTATTGAAAACCTATCATATTTACCTGTATCCTTTTCAAATATTAAGACGCTTTGAATTTTGAATTGTTTTTTCTTTTTCCCTATTGTTTTTGTGTTCTCTATGCTTTGTATATTGAGATTACACAGGTGAACTTTTTTGTC

Coding sequence (CDS)

ATGGGAAGAGGAAGAGTAGAGTTGAAGAGGATAGAGAACAAAATAAACAGACAAGTAACATTTGCAAAGAGAAGAAATGGGCTTTTGAAGAAAGCTTATGAACTTTCTGTTCTTTGTGATGCTGAAGTTGCTCTTATCATCTTCTCAAATCGTGGCAAGCTCTATGAATTCTGTAGTACTTCCAATATGCTTAAAACGCTGGAGAGGTACCAAAAATGCAGTTATGGAGCGGTGGAGGTTACAAAACCGGCTAAAGAACTCGAGAGTAGTTATAGAGAGTACTTGAAGCTGAAGTCTAGGTTTGAGTCTCTACAAAGAACTCAGAGAAACCTTCTTGGGGAGGACTTGGGTCCATTGAACTCAAAAGAGCTTGAGCAGCTGGAGCGTCAGCTTGAGTCTTCTTTGAAGCAAGTTAGGTCTACCAAGACTCAGTACATGCTGGACCAACTATCTGATCTTCAGAACAAGGAACAAATGCTGATTGAAACTAACAGAGCTCTGCAAATAAAGGTAATTAATCAACATTTCTTTTCCTAA

Protein sequence

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLNSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKVINQHFFS

Homology

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BLAST of Cucsat.G11580.T8 vs. ExPASy Swiss-Prot
Match: P29382 (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana OX=3702 GN=SEP1 PE=1 SV=2)

HSP 1 Score: 292.4 bits (747), Expect = 3.6e-78
Identity = 154/172 (89.53%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPL 120
           SNMLKTL+RYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGEDLGPL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 172
           NSKELEQLERQL+ SLKQVRS KTQYMLDQLSDLQNKEQML+ETNRAL +K+
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKL 172

[Close]

BLAST of Cucsat.G11580.T8 vs. ExPASy Swiss-Prot
Match: Q8LLR2 (Agamous-like MADS-box protein MADS2 OS=Vitis vinifera OX=29760 GN=MADS2 PE=2 SV=2)

HSP 1 Score: 290.8 bits (743), Expect = 1.0e-77
Identity = 154/172 (89.53%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELE-SSYREYLKLKSRFESLQRTQRNLLGEDLGPL 120
           S+MLKTLERYQKCSYGAVEV++P+KELE SSYREYLKLKS+FESLQRTQRNLLGEDLGPL
Sbjct: 61  SSMLKTLERYQKCSYGAVEVSRPSKELEQSSYREYLKLKSKFESLQRTQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 172
           N+KELEQLERQLE+SLKQVRSTKTQ+MLDQLSDLQNKEQ+L+E+N+AL  K+
Sbjct: 121 NTKELEQLERQLETSLKQVRSTKTQFMLDQLSDLQNKEQVLVESNKALTRKL 172

[Close]

BLAST of Cucsat.G11580.T8 vs. ExPASy Swiss-Prot
Match: P29384 (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana OX=3702 GN=SEP2 PE=1 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.2e-75
Identity = 148/172 (86.05%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPL 120
           SNMLKTLERYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGEDLGPL
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 172
           NSKELEQLERQL+ SLKQVR  KTQYMLDQLSDLQ KE +L++ NRAL +K+
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKL 172

[Close]

BLAST of Cucsat.G11580.T8 vs. ExPASy Swiss-Prot
Match: Q39685 (MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.2e-68
Identity = 134/171 (78.36%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120
           S M KTLERYQ+CSYG++E ++P+KE ESSY+EYLKLK++ + LQR+ RNLLGEDLG L+
Sbjct: 61  SCMNKTLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELS 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 172
           +KELEQLE QL+ SL+Q+RS KTQ+MLDQL+DLQ KE+ML E+NRAL+ K+
Sbjct: 121 TKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKL 171

[Close]

BLAST of Cucsat.G11580.T8 vs. ExPASy Swiss-Prot
Match: O65874 (MADS-box transcription factor 1 OS=Pisum sativum OX=3888 GN=MTF1 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.7e-67
Identity = 138/172 (80.23%), Postives = 156/172 (90.70%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKR+ENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVE---VTKPAKELE-SSYREYLKLKSRFESLQRTQRNLLGEDL 120
           S+MLKTLERYQKC+YGA E    +K A  LE SS +EYLKLK+R+ESLQR+QRNL+GEDL
Sbjct: 61  SSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDL 120

Query: 121 GPLNSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQ 169
           GPL+SK+LE LERQL+SSLKQ+RST+TQ+MLDQL DLQ KE +L E NRAL+
Sbjct: 121 GPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALR 172

[Close]

BLAST of Cucsat.G11580.T8 vs. NCBI nr
Match: NP_001267667.1 (developmental protein SEPALLATA 2-like [Cucumis sativus] >AAF23363.1 CAGL2 [Cucumis sativus] >KAE8649327.1 hypothetical protein Csa_015352 [Cucumis sativus])

HSP 1 Score: 315 bits (807), Expect = 1.27e-106
Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 171
           SKELEQLERQL SSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIK+
Sbjct: 121 SKELEQLERQLVSSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKL 171

[Close]

BLAST of Cucsat.G11580.T8 vs. NCBI nr
Match: AXR70631.1 (MADS-box 9 [Momordica dioica])

HSP 1 Score: 315 bits (807), Expect = 1.41e-106
Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 171
           SKELEQLERQL SSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIK+
Sbjct: 121 SKELEQLERQLVSSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKL 171

[Close]

BLAST of Cucsat.G11580.T8 vs. NCBI nr
Match: XP_022155022.1 (developmental protein SEPALLATA 1 [Momordica charantia])

HSP 1 Score: 315 bits (806), Expect = 1.81e-106
Identity = 168/171 (98.25%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 171
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRAL +K+
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALTLKL 171

[Close]

BLAST of Cucsat.G11580.T8 vs. NCBI nr
Match: XP_022955902.1 (developmental protein SEPALLATA 1 isoform X2 [Cucurbita moschata] >XP_022980708.1 developmental protein SEPALLATA 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 314 bits (805), Expect = 2.57e-106
Identity = 168/171 (98.25%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+RFESLQ TQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQTTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 171
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIK+
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKL 171

[Close]

BLAST of Cucsat.G11580.T8 vs. NCBI nr
Match: XP_038877181.1 (agamous-like MADS-box protein MADS2 isoform X2 [Benincasa hispida])

HSP 1 Score: 313 bits (802), Expect = 7.34e-106
Identity = 167/171 (97.66%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSI 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+RFE+LQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFETLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 171
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIK+
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKL 171

[Close]

BLAST of Cucsat.G11580.T8 vs. ExPASy TrEMBL
Match: Q9SEG4 (CAGL2 OS=Cucumis sativus OX=3659 GN=CAGL2 PE=2 SV=1)

HSP 1 Score: 315 bits (807), Expect = 6.16e-107
Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 171
           SKELEQLERQL SSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIK+
Sbjct: 121 SKELEQLERQLVSSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKL 171

[Close]

BLAST of Cucsat.G11580.T8 vs. ExPASy TrEMBL
Match: A0A346NTN8 (MADS-box 9 OS=Momordica dioica OX=654836 PE=2 SV=1)

HSP 1 Score: 315 bits (807), Expect = 6.83e-107
Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 171
           SKELEQLERQL SSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIK+
Sbjct: 121 SKELEQLERQLVSSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKL 171

[Close]

BLAST of Cucsat.G11580.T8 vs. ExPASy TrEMBL
Match: A0A6J1DN93 (developmental protein SEPALLATA 1 OS=Momordica charantia OX=3673 GN=LOC111022168 PE=4 SV=1)

HSP 1 Score: 315 bits (806), Expect = 8.75e-107
Identity = 168/171 (98.25%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 171
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRAL +K+
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALTLKL 171

[Close]

BLAST of Cucsat.G11580.T8 vs. ExPASy TrEMBL
Match: A0A6J1J038 (developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479996 PE=4 SV=1)

HSP 1 Score: 314 bits (805), Expect = 1.24e-106
Identity = 168/171 (98.25%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+RFESLQ TQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQTTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 171
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIK+
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKL 171

[Close]

BLAST of Cucsat.G11580.T8 vs. ExPASy TrEMBL
Match: A0A6J1GUW6 (developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457748 PE=4 SV=1)

HSP 1 Score: 314 bits (805), Expect = 1.24e-106
Identity = 168/171 (98.25%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+RFESLQ TQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQTTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKV 171
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIK+
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKL 171

The following BLAST results are available for this feature:

BLAST of Cucsat.G11580.T8 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29382	3.6e-78	89.53	Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana OX=3702 GN=SEP1 PE=1 S...	[more]
Q8LLR2	1.0e-77	89.53	Agamous-like MADS-box protein MADS2 OS=Vitis vinifera OX=29760 GN=MADS2 PE=2 SV=...	[more]
P29384	2.2e-75	86.05	Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana OX=3702 GN=SEP2 PE=1 S...	[more]
Q39685	1.2e-68	78.36	MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1	[more]
O65874	1.7e-67	80.23	MADS-box transcription factor 1 OS=Pisum sativum OX=3888 GN=MTF1 PE=2 SV=1	[more]

BLAST of Cucsat.G11580.T8 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267667.1	1.27e-106	98.83	developmental protein SEPALLATA 2-like [Cucumis sativus] >AAF23363.1 CAGL2 [Cucu...	[more]
AXR70631.1	1.41e-106	98.83	MADS-box 9 [Momordica dioica]	[more]
XP_022155022.1	1.81e-106	98.25	developmental protein SEPALLATA 1 [Momordica charantia]	[more]
XP_022955902.1	2.57e-106	98.25	developmental protein SEPALLATA 1 isoform X2 [Cucurbita moschata] >XP_022980708....	[more]
XP_038877181.1	7.34e-106	97.66	agamous-like MADS-box protein MADS2 isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G11580.T8 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q9SEG4	6.16e-107	98.83	CAGL2 OS=Cucumis sativus OX=3659 GN=CAGL2 PE=2 SV=1	[more]
A0A346NTN8	6.83e-107	98.83	MADS-box 9 OS=Momordica dioica OX=654836 PE=2 SV=1	[more]
A0A6J1DN93	8.75e-107	98.25	developmental protein SEPALLATA 1 OS=Momordica charantia OX=3673 GN=LOC111022168...	[more]
A0A6J1J038	1.24e-106	98.25	developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1GUW6	1.24e-106	98.25	developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 150..170
None	No IPR available	COILS	Coil	Coil	coord: 121..144
None	No IPR available	PANTHER	PTHR48019:SF87	DEVELOPMENTAL PROTEIN SEPALLATA 1	coord: 1..171
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..171
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 67.51 coord: 3..23 score: 68.71 coord: 23..38 score: 86.34
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.3E-41 score: 154.2
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.7E-26 score: 91.5
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 33.529243
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..84 e-value: 4.4E-28 score: 98.9
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..77
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 84..171 e-value: 8.8E-28 score: 96.4
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 87..177 score: 14.889179
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..76 e-value: 1.10797E-43 score: 138.069

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G11580	Cucsat.G11580	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11580.T8.E1	Cucsat.G11580.T8.E1	exon
Cucsat.G11580.T8.E2	Cucsat.G11580.T8.E2	exon
Cucsat.G11580.T8.E3	Cucsat.G11580.T8.E3	exon
Cucsat.G11580.T8.E4	Cucsat.G11580.T8.E4	exon
Cucsat.G11580.T8.E5	Cucsat.G11580.T8.E5	exon
Cucsat.G11580.T8.E6	Cucsat.G11580.T8.E6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11580.T8.C1	Cucsat.G11580.T8.C1	CDS
Cucsat.G11580.T8.C2	Cucsat.G11580.T8.C2	CDS
Cucsat.G11580.T8.C3	Cucsat.G11580.T8.C3	CDS
Cucsat.G11580.T8.C4	Cucsat.G11580.T8.C4	CDS
Cucsat.G11580.T8.C5	Cucsat.G11580.T8.C5	CDS
Cucsat.G11580.T8.C6	Cucsat.G11580.T8.C6	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G11580.T8	Cucsat.G11580.T8-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding