Cucsat.G11412.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGAAAATTCATAAATACCACCAAATAATTGAGCGCCAATTCTCCATTATCAACCACTGACGAAGTTATTGAAGTTCTTAATCAAACATGGAGAAATCTCGTGAATTTGCTGAACTAATCCTACACGCCATTAATATTCCTCTCTTCAATTCGTAATACCTTTCACTTTCTTCTCTGTCCACTTCCTAATTTGAATTTAATTTCCTCTCTGCCCCGTTACTCTTTCGAATTAATCACGTTCTCTTATGAAACCACTCTTTAAATCCCATGAAGTTTCTGATTCCTGCAACTCCACCGGCCGTCGTTTCCGTTTGGTTGATATTTTCCGGGAAGAAGACGAGGGCGGTGACGGGTTTTCTGGGGATTTGGGTATGTCCCGAGTGCGTGGCTTGTCGGATGAGTCTGTGAGCATTGACTGTTTGTCGCCTCGGCGGATTGTTGCTCGGTGGGTGGCTTCGTTCCGGCGACCGAAGCGGAGGAGAGCGGTTGAGGAGGTTAGGAGAGTGAAAGAGGGTGGAGATTCTGATGGTCCGTTGACGTGTTGTAGGTGCTCGAGGGATGGAGTGGACGGTGGTGCTTCCTCAGCTTCACCGGGAGTGATTGTAGGGCCAGGTGAGTGAGTATACTGATCGAATTGATTTGTGCTTGCGATTTTAATTGGTAGGATGGCTTTCGAATTGATAATGCTAGTGTATTTATCAATGTTAATCAAAACGATTAGGAAACGGAAGAGATGGTAATTTTCTAATGCCGAATGGATTATGCATGCCTACATCTGAATCTGGAAATTCGTATGCCGACTTTTCATATGATAACAAAAATTTGATCGAAGTTATATTGGCAACGTACTAAACTTCCTTTGATCTTTCTTTTTATGGGTTGATGATGGCTAAACATGTTTTTAATAACTCAAAATCAAATCAAATGGTATGAAAATTCCATCTCAAAGGGTATAATTAGACTTGAAATTGTTTTTGAAGAACTTTGTAAATAACAAAAGTAATTATAACCATTTCAAGATTGGGAGAGTCTAATGGATTGAGTTTTCTATATCTCTATGCTGTCCTTGTTTTCTCTTATTGTTTCAATTTGCTTGTGTGCTTAAAACTCACAGGACTGAGTAGGAAAGAAGACACATCATTCAACTTGGGAGTTGGGTGTAGTTTGTTGTCTCTTGTACTTGCAAGTAAAAATGAACTTTCGAAGATGGTAGATTTGAGGAGAGAAATGGAACATTTTCTTCAAGAGATCAAAGAGGATCTTGGAAGAAAAGACAATCACTTTGAGCCATTCCATTCAAATGCAGATGTGGCTTGTTCGTCTACGGATTGTCAAGACGGTCCTTGTTCTACCAGCCAGCTTTCATATCAGCAAGATTTTTCATCTCAAATTGTGTCTGATGCACAATCAACTATACCAAATCATTCCCGGATGTCTTGTTTGTATGAACAAGCTGGGGAATGTCAGGAACGAATCGACGAATTGGAATCTGAATTTGAGGCCGAGTTAGAACGTTTACAGCTTCACTTGGAAGTTGAAAGTTCTTCTGGACGCATAGAACATCTAAGAATTAAGGTATTGAACGAGATAGCTTTTTCTATCCAAATTGATTTGATGGGACCGGTTGGTTCATAATTGCTCTCTTAAAGTTTTTGCAGTCTACATAAAATTGATTTTCACATCCTTTGGTTTGATCTCATTGTTTAGGACTATTTTGGAGATCTTGACCAACATATATCATTATTAGATAATGAAAGGGGTAATCCATCGGCCTTACAAGTAGTTTGAGGTCCTTTGATTTTCAGATGTGGGATTCTCCATACGACCTTCAAGATGGTGTCGTTCATTAATCTTGGATCGGATCATTGTTTTTACCCAATATCATTAATTATTTTCTTATGCCTTGGTTTTATCTCATCCTTATAACCATTTTGATGATTTTGGCCAACACTGGTTATCTGGGATGCCGTAATACTTGGTTTTGGACTTTTTGCCATATAACTTCAGTGGTACTGCTCAAGTTCTTAGAAGGATGTAGGTAATATGATTTGAGGAGCAAAGAAGAAATATCTATGTGATAAGATGTGTCTTCAATCTATGGTAGTTCATGAGCACTCATCCTACTTAAAATTTTTAACATCATGTAGTAATATAATTCAAAATGATTTATCATATTTGAGGGGATGAAGATGTATATTTCTGACATATTATCTGTAATTTTAATGATGTATGCTGCATATTCAATTCTTGATTGCAAGTTCTGAAACTGTGTTGTGTGAAATGACA ATGAAACCACTCTTTAAATCCCATGAAGTTTCTGATTCCTGCAACTCCACCGGCCGTCGTTTCCGTTTGGTTGATATTTTCCGGGAAGAAGACGAGGGCGGTGACGGGTTTTCTGGGGATTTGGGTATGTCCCGAGTGCGTGGCTTGTCGGATGAGTCTGTGAGCATTGACTGTTTGTCGCCTCGGCGGATTGTTGCTCGGTGGGTGGCTTCGTTCCGGCGACCGAAGCGGAGGAGAGCGGTTGAGGAGGTTAGGAGAGTGAAAGAGGGTGGAGATTCTGATGGTCCGTTGACGTGTTGTAGGTGCTCGAGGGATGGAGTGGACGGTGGTGCTTCCTCAGCTTCACCGGGAGTGATTGTAGGGCCAGGACTGAGTAGGAAAGAAGACACATCATTCAACTTGGGAGTTGGGTGTAGTTTGTTGTCTCTTGTACTTGCAAGTAAAAATGAACTTTCGAAGATGGTAGATTTGAGGAGAGAAATGGAACATTTTCTTCAAGAGATCAAAGAGGATCTTGGAAGAAAAGACAATCACTTTGAGCCATTCCATTCAAATGCAGATGTGGCTTGTTCGTCTACGGATTGTCAAGACGGTCCTTGTTCTACCAGCCAGCTTTCATATCAGCAAGATTTTTCATCTCAAATTGTGTCTGATGCACAATCAACTATACCAAATCATTCCCGGATGTCTTGTTTGTATGAACAAGCTGGGGAATGTCAGGAACGAATCGACGAATTGGAATCTGAATTTGAGGCCGAGTTAGAACGTTTACAGCTTCACTTGGAAGTTGAAAGTTCTTCTGGACGCATAGAACATCTAAGAATTAAGGACTATTTTGGAGATCTTGACCAACATATATCATTATTAGATAATGAAAGGGGTAATCCATCGGCCTTACAAGTAGTTTGA MKPLFKSHEVSDSCNSTGRRFRLVDIFREEDEGGDGFSGDLGMSRVRGLSDESVSIDCLSPRRIVARWVASFRRPKRRRAVEEVRRVKEGGDSDGPLTCCRCSRDGVDGGASSASPGVIVGPGLSRKEDTSFNLGVGCSLLSLVLASKNELSKMVDLRREMEHFLQEIKEDLGRKDNHFEPFHSNADVACSSTDCQDGPCSTSQLSYQQDFSSQIVSDAQSTIPNHSRMSCLYEQAGECQERIDELESEFEAELERLQLHLEVESSSGRIEHLRIKDYFGDLDQHISLLDNERGNPSALQVV Homology
BLAST of Cucsat.G11412.T3 vs. ExPASy Swiss-Prot
Match: A0A1P8B9P9 (Protein POLAR-like 1 OS=Arabidopsis thaliana OX=3702 GN=PL1 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 8.3e-11 Identity = 66/233 (28.33%), Postives = 107/233 (45.92%), Query Frame = 0
BLAST of Cucsat.G11412.T3 vs. ExPASy Swiss-Prot
Match: Q6NQ99 (Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION OS=Arabidopsis thaliana OX=3702 GN=POLAR PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.6e-08 Identity = 68/235 (28.94%), Postives = 98/235 (41.70%), Query Frame = 0
BLAST of Cucsat.G11412.T3 vs. NCBI nr
Match: KAE8649940.1 (hypothetical protein Csa_012985 [Cucumis sativus]) HSP 1 Score: 591 bits (1524), Expect = 8.12e-213 Identity = 300/302 (99.34%), Postives = 302/302 (100.00%), Query Frame = 0
BLAST of Cucsat.G11412.T3 vs. NCBI nr
Match: XP_004145585.3 (protein POLAR-like 1 [Cucumis sativus]) HSP 1 Score: 538 bits (1387), Expect = 1.18e-190 Identity = 274/276 (99.28%), Postives = 276/276 (100.00%), Query Frame = 0
BLAST of Cucsat.G11412.T3 vs. NCBI nr
Match: XP_008452855.1 (PREDICTED: protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION [Cucumis melo] >KAA0064585.1 protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION [Cucumis melo var. makuwa] >TYK20005.1 protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION [Cucumis melo var. makuwa]) HSP 1 Score: 506 bits (1303), Expect = 7.74e-178 Identity = 264/278 (94.96%), Postives = 267/278 (96.04%), Query Frame = 0
BLAST of Cucsat.G11412.T3 vs. NCBI nr
Match: XP_038896747.1 (protein POLAR-like 1 [Benincasa hispida]) HSP 1 Score: 447 bits (1150), Expect = 1.66e-154 Identity = 235/278 (84.53%), Postives = 246/278 (88.49%), Query Frame = 0
BLAST of Cucsat.G11412.T3 vs. NCBI nr
Match: XP_023524241.1 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407 bits (1047), Expect = 6.43e-139 Identity = 217/278 (78.06%), Postives = 238/278 (85.61%), Query Frame = 0
BLAST of Cucsat.G11412.T3 vs. ExPASy TrEMBL
Match: A0A0A0L4A3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651980 PE=4 SV=1) HSP 1 Score: 534 bits (1376), Expect = 2.70e-189 Identity = 273/276 (98.91%), Postives = 275/276 (99.64%), Query Frame = 0
BLAST of Cucsat.G11412.T3 vs. ExPASy TrEMBL
Match: A0A5A7VFD4 (Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001210 PE=4 SV=1) HSP 1 Score: 506 bits (1303), Expect = 3.75e-178 Identity = 264/278 (94.96%), Postives = 267/278 (96.04%), Query Frame = 0
BLAST of Cucsat.G11412.T3 vs. ExPASy TrEMBL
Match: A0A1S3BVN0 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION OS=Cucumis melo OX=3656 GN=LOC103493752 PE=4 SV=1) HSP 1 Score: 506 bits (1303), Expect = 3.75e-178 Identity = 264/278 (94.96%), Postives = 267/278 (96.04%), Query Frame = 0
BLAST of Cucsat.G11412.T3 vs. ExPASy TrEMBL
Match: A0A6J1J4L3 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like OS=Cucurbita maxima OX=3661 GN=LOC111481273 PE=4 SV=1) HSP 1 Score: 403 bits (1036), Expect = 1.46e-137 Identity = 215/277 (77.62%), Postives = 235/277 (84.84%), Query Frame = 0
BLAST of Cucsat.G11412.T3 vs. ExPASy TrEMBL
Match: A0A6J1FJK7 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like OS=Cucurbita moschata OX=3662 GN=LOC111445943 PE=4 SV=1) HSP 1 Score: 402 bits (1034), Expect = 2.93e-137 Identity = 214/277 (77.26%), Postives = 235/277 (84.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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