Cucsat.G11393.T7 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCCAAATCTAGACCCTCCGATTCCGCCACCCTTTACGACGGTACTCTTTTTTCACACTACCCCTTTTCAACCTTCTTCTAGATCTTTACTTTGAACTGGGATTTCTGTGTTTTTGTCTCGTGGGGTTTCTTCAATTTGATCCAACAGTTTTTTTTTTTTTTTTCTTTCTCTTCCTTCTCCCTTTTAGGTATTCTATACGGAATTCCTTGCTTTTCTTTTATCTGGGTTTTTATTGGATTGCATTTTTTCTTACTGTATTTTGTGCTTTTTGAACTGTTTCTTTGAATTGGAAGTGAAAATGTAGGAAGGTTGAATCAAGTTTGAAGTTAATTGGAAATGGGGTTTTGATTTTTTTTTTCTTTTTTTTTTTTGCATGCTTGAAATCGGGTTTTTGATTTGTAGGCTGGCTTTGAGGATTGTAATATGAGCAAGCATTTTTTGAGGGAATTGGCAACTCATTTCATTGCGATGAATCTTTGCGGGTATAACTAGTGTTCTGCCGTCTTCTATGCTGTCTCATTTGAGTAGAAATATGGGCTTACTCTGCAGCAGAAATCGTCATTACAACGAACAAGATGCTGAAGAGAAGACGCAGGTGAATCATGCTTCATCAGAAGTATATTATTCGTTGTTTCTGCAAATAGTGCTAGTTGAAAAAACAAAGTGTTGTTGTTATCTTGGGTTTTTTTTTTGTCGAATCTTTAGTTCTATATGATCGTAGTGTGTGCTTTTCCAGGCTGCAGAAATAGAGAGGCGGATTGAACAAGAAACAGAGGCTGAAAAACATATACAAAAACTTCTTCTGCTTGGTAAGTGTATTTTGGCCTTTTACTACCTTTTTTTTTCACTTATAATGGAGGAGGAATCAACTTGTCTGTACTTGAATGTTGAAAACAGTATTTCAAACTTTAGAGGGCAAGTACGTCACTTTTATGTCCTAGGACCTTCTTTCTCCGAGTTAAATTTGTTAATTTAGTGTTTGGTTTATGAGTTTATAATTTGCAGTAGTTAGTATGTTGTATAATATATGACTTTCATAATTGTAGTTATCATTCCAAACCCACATTCCAAGTTTTCTTGTATGCTTGATTTCCCTTCATTAGTTAACACTCAATCATTTCCTTTCCACGGCTGATGTGGGAAGGATTAGAGATTCTGTATGTGTGCTACACTGCTACTTAGTGATGATGACCTTTGGTTTTTGTCTTCTATTTTTTCTTTGACTATGCGAATAAGCTGAGATTTTGCCAATTGTTTAGGTGCTGGAGAGTCTGGGAAATCTACAATTTTTAAGCAGGCAAGCTCTTTAATTCTTTACTGTTATAATCTGCTAGGCCAAAGTGAAGTTGGTCTACTGACATTTCTTACATTTCTACTTTATTTTTTTTTACAGATAAAATTGTTGTTCCAAACTGGGTTTGATGAGGCAGAGCTTAAGAGCTATATTCCAGTCATTCATGCAAATGTGTATCAGACTATAAAAGTATGCAATGTTTGAAAGGGTGTGTTGGTTATTTCCCTTTCTGCATGATTTAGAGAGCAAATGAATTTGTCCAAAAATTTTAAACCATAATATCCTAATCTTCTGATTAGATGCATGTCGATCCTGTATTTTGGTTTTTGGGAACTTCAAATCACATTGTACTGATCTTTTGATGTGAAGTGTGTTGATATTGTACTGTTTGTTAATTCAAGAGCCGTAACCTCTTATTGCACTTGACGTTTCAGGTATTACATGATGGTTCGAAGGAGCTTGCTCAAAATGATAAAGAGTTCACGAAGTATGTTTTATCCAGTGAAAATAAGGTATCAATCTCTTCAATGCCAAACTGGAACCTACATACCTTGAACATTTATCTTATATGATCTTTACCGGTGGTTACAAAAAGAAATTGTGTAGTTCATGATTTAGAAACAGTAATGGGGAGACACACACATATATATATTTGGGTACTAGAACTCACTACCTGTTTTTCCGAAATATTAAATAATAAATATGAGGGTGATGATCATTTTTACCCTTGATACTGTAAAGCTTTTTACTTAATAAACCGTAAATTTTAATTGGGCAGTGTAATTAATACCTTCCTTGGTCTAAAATGGGAAAGTTCCTATGAACTAACTAATTAATCACGTACAAAATACGCAAATTCAGGTAAAGAACACCTAAATCCAACAATGAAACAACCCAAGCTGAAAAATATCCAACACAACTAAAAGAAAGAATACACACGAGCCTTATCCAGCCAAAAGAACACATATAGCTATACAGAATTCACCAAAAAGAAAATGAAAATTAGTTAAGTAGGGGGGTTTAATTTGATGAAATTGAAAGTTTAAGATTAATAGCTTATATGTGTACACTTGGAGGGACTCGTGGTGAACATTTTCCTGCTTAATATTATTTCTCCATGTGATTGCAAACCAGGATATTGGTGAGAAATTATCGGATATCGGAGGTAGATTGGATTACCCGCGTTTGACTAGGGAGCGTGCACAGGATATAGAGACTCTTTGGAAAGATGCTGCGATTCAGGTAGCTGTTGCTCCATGTGAATTTACTACCTTTAAAATGAAGGGATAGTTGCAAATTTAGCAATTAAATTCAAATTAATTAAGTATATAGCACAATTTTAAAAAATTTGCAAATATAGCAAAATTTGTCAAATTCTATCATTGATATAAGTCTATCACTGATAGACCATGTTGCAAATATTGGTCTATCACTGATATACCATATGAAGTCTATCGGCGATACAAGTCTATCAGTGATAATTTTGCTATATTTGTAATTTTTTTAAAATGTTGCTATATCCTTAATTATTATTGCTAAAATAGTCATCCATTGCAATTTCCCTAAAATGAAAGCAACTATGATGATTCTTATTTCGAAACAGTTTTTAAGTTAGCTCAGGGTTCTTGTTCTCTTTGTAGGAAACGTATTCTCGTGGAAATGAACTACAGGTTCCAGATTGCACACAATATTTCATGGAAAATTTGCAAAGATTATCTGATGCAAATTATATTCCAACTAAGGTATTAGATTCATTATTATAGCTAGCTCAAAGGGTTTGAAAATTCTCTTAAGCAAGCTCTTATCAGTTAAGTTCATTGTACGAGCTGAAATTTTGGAAAATATCAACTCTAAAGATTCTAAAGATTTCGTTGTCTTAAAAATTTATCTGCAATTACTATTTTATGGACAAAATAGTTTTGTTTTCAAAAAATATAATTAATCTCTTTTGGTTGCTTTGGGTGGAATTATTTTCTCTCACTTTCTTACAACACTAAACAAAGAACTAGTGTAATCTGTATTTCTTCCTTTTGCCATTATATATCCTGCCTATGTTTGAGAATAATGAGAATTGAGTCATTTGTGTATATATCAGCTGGTTCCTTATGTGCTTTTTGACCACAGGAGGATGTACTTTATGCAAGAGTCCGCACAACTGGTGTTGTTGAAATCCAGTTTAGGTAAATTTTTTACATGGCTCTTCATGATGCATTTCTATTTCTAGGAAGAAATAAATCATTTTCATTGGGATATATATATATGTGTATAATAATAATTCATTAGTATAAGATAAGTAATAAAAATTCAAAGAACTCTCGTATGTTGCACTTAGTTCTTTATCATGAAATTTTGGGATTGTAATTAATTATGGTGTTGGTTTGATTTTGGCAGCCCCGTTGGTGAAAATAAAAAGAGTGGCGAAGTATATAGACTGTTTGATGTTGGTGGACAGAGAAATGAGAGGAGAAAATGGATTCATCTTTTTGAAGGTGTTACAGCAGTAATCTTTTGTGCTGCTATTAGTGAGTAAGACCATCACTCTTTTAACCCACTTATGATTCTGTGGCAGTCTTGATAAATGTAGATGATAAAAGATAAGCCTAGACACTGGAATCTGCAAATCTATTTCATTCTCATTGATGTTTTCGGAGTAACGACTGGGTTGTCATGGATGCTCCTGGAAGCTGATGAGATGGGATGCCATTTGGGACTATGTAATTGTGCAACAAAGTTTTGTGAATAGAGGCTTTTTATTACCTTCTTTTCTATTGTTTCTTTTCATTTGTTTTCTGCTGGAGTGGGTGGGACTAGGTTGGAAAATAGCTTTTGGAAGTTAGTGAACCAAGTTGGTCCAAATGAAATGAAAGGATAATAATTTTAAAAGTATGAACTGATAGAGGAAAAGAAGATCTTAACTAGCTGGTGATCTAACAACCCATGTGGAGATAGTTATAACGTGACGAGACTCGTTGTCCTATTACAATATCTCTTTTTATTTGGACGGTCTCAGGCTATTAAGCGGTTTCAGTTGTTGGAATGGAACAAAAAGGATTGAAATTATAAAGTTAGTAGTTGTGGTCCCATGTCTATTTTGGTTGGAAGAATAAGTATTATATTAAAGTTTACTGCAATGGATTAAACTGTGATAACTGTTTCAGGTATGATCAAACACTTTTTGAGGATGAACAGAAGAACCGAATGATGGAGACGAAGGAACTTTTTGAGTGGGTTCTGAAACAAGAGTGTTTTGAGGTTTTCTTTTCTGTTTGTTACTGTTTACATGATCAAGTCTATTAGTTTCGATAAATTTCTTTTCACAAGTTGATAATAACTTTTTATTTTTTTATTTTTTATGGGTCTATCCTGTGTGCAGAAAACGTCATTTATGCTTTTTCTCAACAAATTCGATATCTTCGAGAAAAAGGTTCTAAAAGTAAGTGTTGATGGAGAGTATTACAAAGCACTTGGATAGGTCATTGATGAGTTCATGAGATATTAACATGAATTAGCTTCTTGTGATAGGTCCCTCTCAGTGTGTGTGAATGGTTCAATGATTATCAGCCGGTTTCGACTGGAAAACAGGAGATCGAGCATGCCTATGAGTATGTGTCTAAAACTCTCTTGTTATTGTTGCCTGTGATGACATCGTCCTTGGCTCCTAATCTGCTTAAACAGAGCCTTTTCTGTAGCTGGTTGCTAGGGACAATGCTGCTTTTTTTTTTTCCCCTCTGTTTGTAGTTTTTCTAAAATAACTTTAGAGTGATGCATTTGAATCGATGAATTCAGGTTCGTGAAGAAAAAATTCGAGGAGTTATATTTTAAGAGCACGGCACCGGATCGAGTAGATCGGGTGTTTAAGGTATACAGAACTACTGCTCTTGATCAGAAACTTGTAAAGAAAACGTTCAAGCTCGTAGATGAAACTTTGAGGCGGCGAAATCTCTTTGAGGCTGGGTTATTGTGACCTTGTTAACAAAACCTTCCTCACACAGAAAAATGGGAAAAAAAAAGGGTTGCGCTCTTGTTTGATGAACAAACTTATATTGGATTGTCATTTTAAGTAATTAAAGTTGAAGCTGAAGAAGTTGGCAGTCTGATTCATTGATTTAAAAACATTTTGTGTCAAATTAAATTTTGCCAAAGTTGAAATCTTTTTAACTATATGTAATTTGATGTTCCAAATTGTTGTGAAATTTCATGAGCTTCAACAACCTTTCTTCCCTTTCTATGACTTGGTTTTGGATTCTGAAGGGCCACTTCCATTTCTCTGCATTACTCAAATTAATGGAACTTTTTTTTGAGAGTT ATGGAAAATTTGCAAAGATTATCTGATGCAAATTATATTCCAACTAAGGAGGATGTACTTTATGCAAGAGTCCGCACAACTGGTGTTGTTGAAATCCAGTTTAGCCCCGTTGGTGAAAATAAAAAGAGTGGCGAAGTATATAGACTGTTTGATGTTGGTGGACAGAGAAATGAGAGGAGAAAATGGATTCATCTTTTTGAAGGTGTTACAGCAGTAATCTTTTGTGCTGCTATTAGTGAGTATGATCAAACACTTTTTGAGGATGAACAGAAGAACCGAATGATGGAGACGAAGGAACTTTTTGAGTGGGTTCTGAAACAAGAGTGTTTTGAGAAAACGTCATTTATGCTTTTTCTCAACAAATTCGATATCTTCGAGAAAAAGGTTCTAAAAGTCCCTCTCAGTGTGTGTGAATGGTTCAATGATTATCAGCCGGTTTCGACTGGAAAACAGGAGATCGAGCATGCCTATGAGTTCGTGAAGAAAAAATTCGAGGAGTTATATTTTAAGAGCACGGCACCGGATCGAGTAGATCGGGTGTTTAAGGTATACAGAACTACTGCTCTTGATCAGAAACTTGTAAAGAAAACGTTCAAGCTCGTAGATGAAACTTTGAGGCGGCGAAATCTCTTTGAGGCTGGGTTATTGTGA MENLQRLSDANYIPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQTLFEDEQKNRMMETKELFEWVLKQECFEKTSFMLFLNKFDIFEKKVLKVPLSVCEWFNDYQPVSTGKQEIEHAYEFVKKKFEELYFKSTAPDRVDRVFKVYRTTALDQKLVKKTFKLVDETLRRRNLFEAGLL Homology
BLAST of Cucsat.G11393.T7 vs. ExPASy Swiss-Prot
Match: Q40224 (Guanine nucleotide-binding protein alpha-1 subunit OS=Lupinus luteus OX=3873 GN=GPA1 PE=2 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 2.6e-115 Identity = 202/216 (93.52%), Postives = 212/216 (98.15%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. ExPASy Swiss-Prot
Match: P49082 (Guanine nucleotide-binding protein alpha-1 subunit OS=Lotus japonicus OX=34305 GN=GPA1 PE=2 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 4.4e-115 Identity = 202/216 (93.52%), Postives = 211/216 (97.69%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. ExPASy Swiss-Prot
Match: P18064 (Guanine nucleotide-binding protein alpha-1 subunit OS=Arabidopsis thaliana OX=3702 GN=GPA1 PE=1 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 9.9e-115 Identity = 203/216 (93.98%), Postives = 211/216 (97.69%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. ExPASy Swiss-Prot
Match: O04279 (Guanine nucleotide-binding protein alpha-2 subunit OS=Pisum sativum OX=3888 GN=GPA2 PE=2 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 2.2e-114 Identity = 200/216 (92.59%), Postives = 211/216 (97.69%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. ExPASy Swiss-Prot
Match: P93163 (Guanine nucleotide-binding protein alpha-2 subunit OS=Glycine max OX=3847 GN=GPA2 PE=2 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 2.2e-114 Identity = 201/216 (93.06%), Postives = 210/216 (97.22%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. NCBI nr
Match: TYK20047.1 (guanine nucleotide-binding protein alpha-1 subunit [Cucumis melo var. makuwa]) HSP 1 Score: 434 bits (1116), Expect = 6.64e-151 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. NCBI nr
Match: KAA0064543.1 (guanine nucleotide-binding protein alpha-1 subunit [Cucumis melo var. makuwa]) HSP 1 Score: 434 bits (1116), Expect = 7.63e-151 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. NCBI nr
Match: XP_038900042.1 (guanine nucleotide-binding protein alpha-1 subunit isoform X2 [Benincasa hispida]) HSP 1 Score: 434 bits (1116), Expect = 8.76e-151 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. NCBI nr
Match: XP_004141348.1 (guanine nucleotide-binding protein alpha-1 subunit [Cucumis sativus] >XP_031739701.1 guanine nucleotide-binding protein alpha-1 subunit [Cucumis sativus] >KGN55384.1 hypothetical protein Csa_012357 [Cucumis sativus]) HSP 1 Score: 434 bits (1116), Expect = 8.76e-151 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. NCBI nr
Match: XP_008452792.1 (PREDICTED: guanine nucleotide-binding protein alpha-1 subunit [Cucumis melo] >XP_008452793.1 PREDICTED: guanine nucleotide-binding protein alpha-1 subunit [Cucumis melo]) HSP 1 Score: 434 bits (1116), Expect = 8.76e-151 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. ExPASy TrEMBL
Match: A0A5D3D908 (Guanine nucleotide-binding protein alpha-1 subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001670 PE=3 SV=1) HSP 1 Score: 434 bits (1116), Expect = 3.22e-151 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. ExPASy TrEMBL
Match: A0A5A7V8U8 (Guanine nucleotide-binding protein alpha-1 subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G002630 PE=3 SV=1) HSP 1 Score: 434 bits (1116), Expect = 3.69e-151 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. ExPASy TrEMBL
Match: A0A1S3BVH4 (guanine nucleotide-binding protein alpha-1 subunit OS=Cucumis melo OX=3656 GN=LOC103493708 PE=3 SV=1) HSP 1 Score: 434 bits (1116), Expect = 4.24e-151 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. ExPASy TrEMBL
Match: A0A0A0L2X2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G648550 PE=3 SV=1) HSP 1 Score: 434 bits (1116), Expect = 4.24e-151 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Cucsat.G11393.T7 vs. ExPASy TrEMBL
Match: A0A6J1F951 (guanine nucleotide-binding protein alpha-1 subunit OS=Cucurbita moschata OX=3662 GN=LOC111443446 PE=3 SV=1) HSP 1 Score: 432 bits (1111), Expect = 2.44e-150 Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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