Cucsat.G11393.T19 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACACATCAGTCATTGAGAAGAAAACCAAAAACCCAAAAAGAAAGAAAAATAATTGTATTTTCCCAATGCCAATCTCATAGATTCATACTAAAGAATTGAAGAAAAGAAACATATAGTGAGAAAAAAAAAACATTTTTTTGATTCTAAACAGACTCTGTCTTTGATTTTTGAAGGAAAAAGAAAAACTCAGAACCATGTCCTTTCTTCTCTTTGACTGAGGAGAGAAATTGAAAGTGAAATTGAAAAAGAAGAGAAAGATAAACAATGGCATTTTGATTCTCACCTTTCGGTTCTTTCTTCCTTCTTTCATTCCTGATTTAGCCGACACGTACAATTTTTTCCTCTTTTTCTCACTAAAATTTTCCCCATTTCATTCTGTTCTTAATTATACTCTTTTTTTCGTACACTTCTATCTCTTCCCACAAACTCCTCCTTTCGTTTTTTTTTTTTATTCCTTCAATCAATTTTTAATCTTTGATTAAACCCCACTTCACTCCTAGAACACGACGAGTTTCTCTTAGCTGCTCTACCAATCCGCCAAATCTAGACCCTCCGATTCCGCCACCCTTTACGACGGTACTCTTTTTTCACACTACCCCTTTTCAACCTTCTTCTAGATCTTTACTTTGAACTGGGATTTCTGTGTTTTTGTCTCGTGGGGTTTCTTCAATTTGATCCAACAGTTTTTTTTTTTTTTTTCTTTCTCTTCCTTCTCCCTTTTAGGTATTCTATACGGAATTCCTTGCTTTTCTTTTATCTGGGTTTTTATTGGATTGCATTTTTTCTTACTGTATTTTGTGCTTTTTGAACTGTTTCTTTGAATTGGAAGTGAAAATGTAGGAAGGTTGAATCAAGTTTGAAGTTAATTGGAAATGGGGTTTTGATTTTTTTTTTCTTTTTTTTTTTTGCATGCTTGAAATCGGGTTTTTGATTTGTAGGCTGGCTTTGAGGATTGTAATATGAGCAAGCATTTTTTGAGGGAATTGGCAACTCATTTCATTGCGATGAATCTTTGCGGGTATAACTAGTGTTCTGCCGTCTTCTATGCTGTCTCATTTGAGTAGAAATATGGGCTTACTCTGCAGCAGAAATCGTCATTACAACGAACAAGATGCTGAAGAGAAGACGCAGGTGAATCATGCTTCATCAGAAGTATATTATTCGTTGTTTCTGCAAATAGTGCTAGTTGAAAAAACAAAGTGTTGTTGTTATCTTGGGTTTTTTTTTTGTCGAATCTTTAGTTCTATATGATCGTAGTGTGTGCTTTTCCAGGCTGCAGAAATAGAGAGGCGGATTGAACAAGAAACAGAGGCTGAAAAACATATACAAAAACTTCTTCTGCTTGGTAAGTGTATTTTGGCCTTTTACTACCTTTTTTTTTCACTTATAATGGAGGAGGAATCAACTTGTCTGTACTTGAATGTTGAAAACAGTATTTCAAACTTTAGAGGGCAAGTACGTCACTTTTATGTCCTAGGACCTTCTTTCTCCGAGTTAAATTTGTTAATTTAGTGTTTGGTTTATGAGTTTATAATTTGCAGTAGTTAGTATGTTGTATAATATATGACTTTCATAATTGTAGTTATCATTCCAAACCCACATTCCAAGTTTTCTTGTATGCTTGATTTCCCTTCATTAGTTAACACTCAATCATTTCCTTTCCACGGCTGATGTGGGAAGGATTAGAGATTCTGTATGTGTGCTACACTGCTACTTAGTGATGATGACCTTTGGTTTTTGTCTTCTATTTTTTCTTTGACTATGCGAATAAGCTGAGATTTTGCCAATTGTTTAGGTGCTGGAGAGTCTGGGAAATCTACAATTTTTAAGCAGGCAAGCTCTTTAATTCTTTACTGTTATAATCTGCTAGGCCAAAGTGAAGTTGGTCTACTGACATTTCTTACATTTCTACTTTATTTTTTTTTACAGATAAAATTGTTGTTCCAAACTGGGTTTGATGAGGCAGAGCTTAAGAGCTATATTCCAGTCATTCATGCAAATGTGTATCAGACTATAAAAGTATGCAATGTTTGAAAGGGTGTGTTGGTTATTTCCCTTTCTGCATGATTTAGAGAGCAAATGAATTTGTCCAAAAATTTTAAACCATAATATCCTAATCTTCTGATTAGATGCATGTCGATCCTGTATTTTGGTTTTTGGGAACTTCAAATCACATTGTACTGATCTTTTGATGTGAAGTGTGTTGATATTGTACTGTTTGTTAATTCAAGAGCCGTAACCTCTTATTGCACTTGACGTTTCAGGTATTACATGATGGTTCGAAGGAGCTTGCTCAAAATGATAAAGAGTTCACGAAGTATGTTTTATCCAGTGAAAATAAGGTATCAATCTCTTCAATGCCAAACTGGAACCTACATACCTTGAACATTTATCTTATATGATCTTTACCGGTGGTTACAAAAAGAAATTGTGTAGTTCATGATTTAGAAACAGTAATGGGGAGACACACACATATATATATTTGGGTACTAGAACTCACTACCTGTTTTTCCGAAATATTAAATAATAAATATGAGGGTGATGATCATTTTTACCCTTGATACTGTAAAGCTTTTTACTTAATAAACCGTAAATTTTAATTGGGCAGTGTAATTAATACCTTCCTTGGTCTAAAATGGGAAAGTTCCTATGAACTAACTAATTAATCACGTACAAAATACGCAAATTCAGGTAAAGAACACCTAAATCCAACAATGAAACAACCCAAGCTGAAAAATATCCAACACAACTAAAAGAAAGAATACACACGAGCCTTATCCAGCCAAAAGAACACATATAGCTATACAGAATTCACCAAAAAGAAAATGAAAATTAGTTAAGTAGGGGGGTTTAATTTGATGAAATTGAAAGTTTAAGATTAATAGCTTATATGTGTACACTTGGAGGGACTCGTGGTGAACATTTTCCTGCTTAATATTATTTCTCCATGTGATTGCAAACCAGGATATTGGTGAGAAATTATCGGATATCGGAGGTAGATTGGATTACCCGCGTTTGACTAGGGAGCGTGCACAGGATATAGAGACTCTTTGGAAAGATGCTGCGATTCAGGTAGCTGTTGCTCCATGTGAATTTACTACCTTTAAAATGAAGGGATAGTTGCAAATTTAGCAATTAAATTCAAATTAATTAAGTATATAGCACAATTTTAAAAAATTTGCAAATATAGCAAAATTTGTCAAATTCTATCATTGATATAAGTCTATCACTGATAGACCATGTTGCAAATATTGGTCTATCACTGATATACCATATGAAGTCTATCGGCGATACAAGTCTATCAGTGATAATTTTGCTATATTTGTAATTTTTTTAAAATGTTGCTATATCCTTAATTATTATTGCTAAAATAGTCATCCATTGCAATTTCCCTAAAATGAAAGCAACTATGATGATTCTTATTTCGAAACAGTTTTTAAGTTAGCTCAGGGTTCTTGTTCTCTTTGTAGGAAACGTATTCTCGTGGAAATGAACTACAGGTTCCAGATTGCACACAATATTTCATGGAAAATTTGCAAAGATTATCTGATGCAAATTATATTCCAACTAAGGTATTAGATTCATTATTATAGCTAGCTCAAAGGGTTTGAAAATTCTCTTAAGCAAGCTCTTATCAGTTAAGTTCATTGTACGAGCTGAAATTTTGGAAAATATCAACTCTAAAGATTCTAAAGATTTCGTTGTCTTAAAAATTTATCTGCAATTACTATTTTATGGACAAAATAGTTTTGTTTTCAAAAAATATAATTAATCTCTTTTGGTTGCTTTGGGTGGAATTATTTTCTCTCACTTTCTTACAACACTAAACAAAGAACTAGTGTAATCTGTATTTCTTCCTTTTGCCATTATATATCCTGCCTATGTTTGAGAATAATGAGAATTGAGTCATTTGTGTATATATCAGCTGGTTCCTTATGTGCTTTTTGACCACAGGAGGATGTACTTTATGCAAGAGTCCGCACAACTGGTGTTGTTGAAATCCAGTTTAGGTAAATTTTTTACATGGCTCTTCATGATGCATTTCTATTTCTAGGAAGAAATAAATCATTTTCATTGGGATATATATATATGTGTATAATAATAATTCATTAGTATAAGATAAGTAATAAAAATTCAAAGAACTCTCGTATGTTGCACTTAGTTCTTTATCATGAAATTTTGGGATTGTAATTAATTATGGTGTTGGTTTGATTTTGGCAGCCCCGTTGGTGAAAATAAAAAGAGTGGCGAAGTATATAGACTGTTTGATGTTGGTGGACAGAGAAATGAGAGGAGAAAATGGATTCATCTTTTTGAAGGTGTTACAGCAGTAATCTTTTGTGCTGCTATTAGTGAGTAAGACCATCACTCTTTTAACCCACTTATGATTCTGTGGCAGTCTTGATAAATGTAGATGATAAAAGATAAGCCTAGACACTGGAATCTGCAAATCTATTTCATTCTCATTGATGTTTTCGGAGTAACGACTGGGTTGTCATGGATGCTCCTGGAAGCTGATGAGATGGGATGCCATTTGGGACTATGTAATTGTGCAACAAAGTTTTGTGAATAGAGGCTTTTTATTACCTTCTTTTCTATTGTTTCTTTTCATTTGTTTTCTGCTGGAGTGGGTGGGACTAGGTTGGAAAATAGCTTTTGGAAGTTAGTGAACCAAGTTGGTCCAAATGAAATGAAAGGATAATAATTTTAAAAGTATGAACTGATAGAGGAAAAGAAGATCTTAACTAGCTGGTGATCTAACAACCCATGTGGAGATAGTTATAACGTGACGAGACTCGTTGTCCTATTACAATATCTCTTTTTATTTGGACGGTCTCAGGCTATTAAGCGGTTTCAGTTGTTGGAATGGAACAAAAAGGATTGAAATTATAAAGTTAGTAGTTGTGGTCCCATGTCTATTTTGGTTGGAAGAATAAGTATTATATTAAAGTTTACTGCAATGGATTAAACTGTGATAACTGTTTCAGGTATGATCAAACACTTTTTGAGGATGAACAGAAGAACCGAATGATGGAGACGAAGGAACTTTTTGAGTGGGTTCTGAAACAAGAGTGTTTTGAGGTTTTCTTTTCTGTTTGTTACTGTTTACATGATCAAGTCTATTAGTTTCGATAAATTTCTTTTCACAAGTTGATAATAACTTTTTATTTTTTTATTTTTTATGGGTCTATCCTGTGTGCAGAAAACGTCATTTATGCTTTTTCTCAACAAATTCGATATCTTCGAGAAAAAGGTTCTAAAAGTAAGTGTTGATGGAGAGTATTACAAAGCACTTGGATAGGTCATTGATGAGTTCATGAGATATTAACATGAATTAGCTTCTTGTGATAGGTCCCTCTCAGTGTGTGTGAATGGTTCAATGATTATCAGCCGGTTTCGACTGGAAAACAGGAGATCGAGCATGCCTATGAGTATGTGTCTAAAACTCTCTTGTTATTGTTGCCTGTGATGACATCGTCCTTGGCTCCTAATCTGCTTAAACAGAGCCTTTTCTGTAGCTGGTTGCTAGGGACAATGCTGCTTTTTTTTTTTCCCCTCTGTTTGTAGTTTTTCTAAAATAACTTTAGAGTGATGCATTTGAATCGATGAATTCAGGTTCGTGAAGAAAAAATTCGAGGAGTTATATTTTAAGAGCACGGCACCGGATCGAGTAGATCGGGTGTTTAAGGTATACAGAACTACTGCTCTTGATCAGAAACTTGTAAAGAAAACGTTCAAGCTCGTAGATGAAACTTTGAGGCGGCGAAATCTCTTTGAGGCTGGGTTATTGTGACCTTGTTAACAAAACCTTCCTCACACAGAAAAATGGGAAAAAAAAAGGGTTGCGCTCTTGTTTGATGAACAAACTTATATTGGATTGTCATTTTAAGTAATTAAAGTTGAAGCTGAAGAAGTTGGCAGTCTGATTCATTGATTTAAAAACATTTTGTGTCAAATTAAATTTTGCCAAAGTTGAAATCTTTTTAACTATATGTAATTTGATGTTCCAAATTGTTGTGAAATTTCATGAGCTTCAAC ATGCTGTCTCATTTGAGTAGAAATATGGGCTTACTCTGCAGCAGAAATCGTCATTACAACGAACAAGATGCTGAAGAGAAGACGCAGGCTGCAGAAATAGAGAGGCGGATTGAACAAGAAACAGAGGCTGAAAAACATATACAAAAACTTCTTCTGCTTGGTGCTGGAGAGTCTGGGAAATCTACAATTTTTAAGCAGATAAAATTGTTGTTCCAAACTGGGTTTGATGAGGCAGAGCTTAAGAGCTATATTCCAGTCATTCATGCAAATGTGTATCAGACTATAAAAGTATTACATGATGGTTCGAAGGAGCTTGCTCAAAATGATAAAGAGTTCACGAAGTATGTTTTATCCAGTGAAAATAAGGATATTGGTGAGAAATTATCGGATATCGGAGGTAGATTGGATTACCCGCGTTTGACTAGGGAGCGTGCACAGGATATAGAGACTCTTTGGAAAGATGCTGCGATTCAGGAAACGTATTCTCGTGGAAATGAACTACAGGTTCCAGATTGCACACAATATTTCATGGAAAATTTGCAAAGATTATCTGATGCAAATTATATTCCAACTAAGGAGGATGTACTTTATGCAAGAGTCCGCACAACTGGTGTTGTTGAAATCCAGTTTAGCCCCGTTGGTGAAAATAAAAAGAGTGGCGAAGTATATAGACTGTTTGATGTTGGTGGACAGAGAAATGAGAGGAGAAAATGGATTCATCTTTTTGAAGGTGTTACAGCAGTAATCTTTTGTGCTGCTATTAGTGAGTATGATCAAACACTTTTTGAGGATGAACAGAAGAACCGAATGATGGAGACGAAGGAACTTTTTGAGTGGGTTCTGAAACAAGAGTGTTTTGAGGTTTTCTTTTCTGTTTGTTACTGTTTACATGATCAAGTCTATTAG MLSHLSRNMGLLCSRNRHYNEQDAEEKTQAAEIERRIEQETEAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYIPVIHANVYQTIKVLHDGSKELAQNDKEFTKYVLSSENKDIGEKLSDIGGRLDYPRLTRERAQDIETLWKDAAIQETYSRGNELQVPDCTQYFMENLQRLSDANYIPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQTLFEDEQKNRMMETKELFEWVLKQECFEVFFSVCYCLHDQVY Homology
BLAST of Cucsat.G11393.T19 vs. ExPASy Swiss-Prot
Match: P49082 (Guanine nucleotide-binding protein alpha-1 subunit OS=Lotus japonicus OX=34305 GN=GPA1 PE=2 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 1.2e-139 Identity = 246/279 (88.17%), Postives = 262/279 (93.91%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. ExPASy Swiss-Prot
Match: O04278 (Guanine nucleotide-binding protein alpha-1 subunit OS=Pisum sativum OX=3888 GN=GPA1 PE=2 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 1.6e-139 Identity = 243/279 (87.10%), Postives = 264/279 (94.62%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. ExPASy Swiss-Prot
Match: Q40224 (Guanine nucleotide-binding protein alpha-1 subunit OS=Lupinus luteus OX=3873 GN=GPA1 PE=2 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 6.8e-138 Identity = 243/279 (87.10%), Postives = 261/279 (93.55%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. ExPASy Swiss-Prot
Match: P93564 (Guanine nucleotide-binding protein alpha-1 subunit OS=Solanum tuberosum OX=4113 GN=GPA1 PE=2 SV=1) HSP 1 Score: 489.2 bits (1258), Expect = 3.4e-137 Identity = 240/279 (86.02%), Postives = 261/279 (93.55%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. ExPASy Swiss-Prot
Match: O04279 (Guanine nucleotide-binding protein alpha-2 subunit OS=Pisum sativum OX=3888 GN=GPA2 PE=2 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 1.7e-136 Identity = 240/279 (86.02%), Postives = 259/279 (92.83%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. NCBI nr
Match: XP_004141348.1 (guanine nucleotide-binding protein alpha-1 subunit [Cucumis sativus] >XP_031739701.1 guanine nucleotide-binding protein alpha-1 subunit [Cucumis sativus] >KGN55384.1 hypothetical protein Csa_012357 [Cucumis sativus]) HSP 1 Score: 569 bits (1466), Expect = 1.47e-202 Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. NCBI nr
Match: XP_008452792.1 (PREDICTED: guanine nucleotide-binding protein alpha-1 subunit [Cucumis melo] >XP_008452793.1 PREDICTED: guanine nucleotide-binding protein alpha-1 subunit [Cucumis melo]) HSP 1 Score: 564 bits (1453), Expect = 1.40e-200 Identity = 284/287 (98.95%), Postives = 285/287 (99.30%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. NCBI nr
Match: XP_038900042.1 (guanine nucleotide-binding protein alpha-1 subunit isoform X2 [Benincasa hispida]) HSP 1 Score: 560 bits (1444), Expect = 3.29e-199 Identity = 282/287 (98.26%), Postives = 285/287 (99.30%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. NCBI nr
Match: XP_023534919.1 (guanine nucleotide-binding protein alpha-1 subunit [Cucurbita pepo subsp. pepo] >XP_023534920.1 guanine nucleotide-binding protein alpha-1 subunit [Cucurbita pepo subsp. pepo] >XP_023534921.1 guanine nucleotide-binding protein alpha-1 subunit [Cucurbita pepo subsp. pepo] >XP_023534922.1 guanine nucleotide-binding protein alpha-1 subunit [Cucurbita pepo subsp. pepo]) HSP 1 Score: 551 bits (1421), Expect = 1.05e-195 Identity = 276/287 (96.17%), Postives = 283/287 (98.61%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. NCBI nr
Match: XP_022977040.1 (guanine nucleotide-binding protein alpha-1 subunit [Cucurbita maxima] >XP_022977041.1 guanine nucleotide-binding protein alpha-1 subunit [Cucurbita maxima] >XP_022977042.1 guanine nucleotide-binding protein alpha-1 subunit [Cucurbita maxima] >XP_022977043.1 guanine nucleotide-binding protein alpha-1 subunit [Cucurbita maxima]) HSP 1 Score: 550 bits (1418), Expect = 2.99e-195 Identity = 276/287 (96.17%), Postives = 282/287 (98.26%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. ExPASy TrEMBL
Match: A0A0A0L2X2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G648550 PE=3 SV=1) HSP 1 Score: 569 bits (1466), Expect = 7.11e-203 Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. ExPASy TrEMBL
Match: A0A1S3BVH4 (guanine nucleotide-binding protein alpha-1 subunit OS=Cucumis melo OX=3656 GN=LOC103493708 PE=3 SV=1) HSP 1 Score: 564 bits (1453), Expect = 6.79e-201 Identity = 284/287 (98.95%), Postives = 285/287 (99.30%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. ExPASy TrEMBL
Match: A0A6J1INV6 (guanine nucleotide-binding protein alpha-1 subunit OS=Cucurbita maxima OX=3661 GN=LOC111477231 PE=3 SV=1) HSP 1 Score: 550 bits (1418), Expect = 1.45e-195 Identity = 276/287 (96.17%), Postives = 282/287 (98.26%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. ExPASy TrEMBL
Match: A0A6J1F951 (guanine nucleotide-binding protein alpha-1 subunit OS=Cucurbita moschata OX=3662 GN=LOC111443446 PE=3 SV=1) HSP 1 Score: 550 bits (1418), Expect = 1.45e-195 Identity = 276/287 (96.17%), Postives = 282/287 (98.26%), Query Frame = 0
BLAST of Cucsat.G11393.T19 vs. ExPASy TrEMBL
Match: A0A5D3D908 (Guanine nucleotide-binding protein alpha-1 subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001670 PE=3 SV=1) HSP 1 Score: 550 bits (1416), Expect = 2.19e-195 Identity = 276/279 (98.92%), Postives = 277/279 (99.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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