Cucsat.G11095.T1 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G11095.T1
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionTransducin/WD40 repeat-like superfamily protein
Locationctg1740: 297409 .. 298470 (-)
RNA-Seq ExpressionCucsat.G11095.T1
SyntenyCucsat.G11095.T1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GACGCCGCTTAGAATAGCCACACTCACAACTCCAAACACCGCGACCTGCTTGGCCGCCCATAACGGCCTCCTCTACTCCGGCGCCACCAACCAAATCACCGTCTTCGATATAACCAACCATTTCACTCAAATCGACACTCTTTGCGTAAACGACGCTGCTTCGGGGTCCGTTAAATCCATCGCATTTGGGCCTTGGAAAGTCTTCACGGCTCATCAGGACTGCAAGATCAGAGTATGGAAGGTCACACGCTCGGGACCGCCATGTCACCGGCTTCTGGCTACTCTCCCCACCGTTAAAGACCGGCTGTACCGGTTTATTTCGCCGCGGAATTATGTTCATGTACGGCGACACCGTAAGCGGCTGTGGATTGAGCATTGGGATGCGGTTTCTGGGGTGGTGGTTAATGGAGGATTTGTGTACTCTGTTTCATGGGATCGGAGTTTAAAGGTTTGGAGTGCTTCTGACCATAAGTGTTTGTTGTCTGTCAAAGCTCACGAGGATGCAGTCAACGCTGTTGCTGTAGGGCAGAACGGCGTCGTGTATACTGGCTCTGCTGATGGGGTTATTGGAGTTTGGGAGGTCAGGGAGGGGAAGAAGAAGAAGAAGTATACGTTGGTTAGGACTTTGAACAACCACAAATCCACGGTAATACGACAATCAACTAAATACTAAATACTAAAAGGAACTAAATACTAATACAATTCATTTATAGGTAAACGCGATCGTACTAAACGAGGGAGGTCGGGCAATGTTTTCGGGGAGCAGTGATCGTTCGATAATGGTGTGGAAGAAAGAAGATGGTGGGAAGAAGATTTCGTTTGTGGAGGATTTATGGGGTCATCAAGGCGCTGTATTGTGCTTGTATACTTTTCGAGACTTATTAGTTAGTGGGTCGGAAGATAGGACACTCAGGATTTGGAGAGGTGATGTTACAAATGGTTACCGATGTACGACTGTGGTCGATGGACACAGGTCGCCGGTGAAGTCGTTGGTTTTGGTTTCCGTCGAAGATGGTGAACGGAGTTTGATGATCTGTAGTGCTAGCTTGGATGGAGAAATAC

Coding sequence (CDS)

ACGCCGCTTAGAATAGCCACACTCACAACTCCAAACACCGCGACCTGCTTGGCCGCCCATAACGGCCTCCTCTACTCCGGCGCCACCAACCAAATCACCGTCTTCGATATAACCAACCATTTCACTCAAATCGACACTCTTTGCGTAAACGACGCTGCTTCGGGGTCCGTTAAATCCATCGCATTTGGGCCTTGGAAAGTCTTCACGGCTCATCAGGACTGCAAGATCAGAGTATGGAAGGTCACACGCTCGGGACCGCCATGTCACCGGCTTCTGGCTACTCTCCCCACCGTTAAAGACCGGCTGTACCGGTTTATTTCGCCGCGGAATTATGTTCATGTACGGCGACACCGTAAGCGGCTGTGGATTGAGCATTGGGATGCGGTTTCTGGGGTGGTGGTTAATGGAGGATTTGTGTACTCTGTTTCATGGGATCGGAGTTTAAAGGTTTGGAGTGCTTCTGACCATAAGTGTTTGTTGTCTGTCAAAGCTCACGAGGATGCAGTCAACGCTGTTGCTGTAGGGCAGAACGGCGTCGTGTATACTGGCTCTGCTGATGGGGTTATTGGAGTTTGGGAGGTCAGGGAGGGGAAGAAGAAGAAGAAGTATACGTTGGTTAGGACTTTGAACAACCACAAATCCACGGTAAACGCGATCGTACTAAACGAGGGAGGTCGGGCAATGTTTTCGGGGAGCAGTGATCGTTCGATAATGGTGTGGAAGAAAGAAGATGGTGGGAAGAAGATTTCGTTTGTGGAGGATTTATGGGGTCATCAAGGCGCTGTATTGTGCTTGTATACTTTTCGAGACTTATTAGTTAGTGGGTCGGAAGATAGGACACTCAGGATTTGGAGAGGTGATGTTACAAATGGTTACCGATGTACGACTGTGGTCGATGGACACAGGTCGCCGGTGAAGTCGTTGGTTTTGGTTTCCGTCGAAGATGGTGAACGGAGTTTGATGATCTGTAGTGCTAGCTTGGATGGAGAAATA

Protein sequence

TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSIAFGPWKVFTAHQDCKIRVWKVTRSGPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRKRLWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGVVYTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVWKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVDGHRSPVKSLVLVSVEDGERSLMICSASLDGEI
Homology
BLAST of Cucsat.G11095.T1 vs. ExPASy Swiss-Prot
Match: O48716 (Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.2e-60
Identity = 129/322 (40.06%), Postives = 191/322 (59.32%), Query Frame = 0

Query: 17  LAAHNGLLYSGA-TNQITVFDITNHFTQIDTLCVNDAASGSVKSIAFGPWKVFTAHQDCK 76
           LAA   LLY+G+ +  I V+     F+           SG VK+I     K+FT HQD K
Sbjct: 102 LAATKDLLYTGSDSKNIRVWKNLKEFSAF------KCNSGLVKAIVISGEKIFTGHQDGK 161

Query: 77  IRVWKVTRSGPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRKRLWIEHWDAVSGVVVN 136
           IRVWKV+      H+   TLPT+KD     + PRNYV V++HR  LWI+H DAVS + +N
Sbjct: 162 IRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADAVSCLSLN 221

Query: 137 G--GFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGVVYTGSADGVIGVWE 196
              G +YS SWDR++KVW  +D KCL S+ AH+DAVN+V      +V++GSADG +  W+
Sbjct: 222 DEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIVFSGSADGTVKAWK 281

Query: 197 VREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVWKKEDGGKKISFVE 256
             +  K  K+TL++TL   +S V A+ +++ G A++ GSSD  +  W++E   K++++  
Sbjct: 282 RDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWERE---KQLNYGG 341

Query: 257 DLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVDGHRSPVKSLVL--- 316
            L GH+ AVLCL     L+ SGS D+T+ +W+ D  N + C +V+ GH  PVK L +   
Sbjct: 342 ILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRD-GNIHTCLSVLTGHTGPVKCLAVEAD 401

Query: 317 -VSVEDGERSLMICSASLDGEI 332
             + E  ++  ++ S SLD  +
Sbjct: 402 REASERRDKKWIVYSGSLDKSV 413

BLAST of Cucsat.G11095.T1 vs. ExPASy Swiss-Prot
Match: Q00808 (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina OX=2587412 GN=HET-E1 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.4e-19
Identity = 93/319 (29.15%), Postives = 141/319 (44.20%), Query Frame = 0

Query: 46   TLCVNDAASG-----------SVKSIAFGP--WKVFTAHQDCKIRVWKVTRSGPPCHRLL 105
            T+ + DAASG           SV S+AF P   +V +   D  I++W  T SG       
Sbjct: 948  TIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWD-TASG----TCT 1007

Query: 106  ATLPTVKDRLYRFISPRNYVHVRRHRKRLWIEHWDAVSGVVV-----NGGFVYSV----- 165
             TL      ++      +   V        I+ WD  SG        +GG+V SV     
Sbjct: 1008 QTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPD 1067

Query: 166  -------SWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGV-VYTGSADGVIGVWEV 225
                   S D ++K+W A    C  +++ H D+V +VA   +G  V +GS DG I +W+ 
Sbjct: 1068 GQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDA 1127

Query: 226  REGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVWKKEDGGKKISFVED 285
              G      T  +TL  H   V+++  +  G+ + SGS D +I +W    G    +  + 
Sbjct: 1128 ASG------TCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASG----TCTQT 1187

Query: 286  LWGHQGAVLCLYTFRD--LLVSGSEDRTLRIWRGDVTNGYRCTTVVDGHRSPVKSLVLVS 332
            L GH G V  +    D   + SGS D+T++IW  D  +G  CT  ++GH   V+S+    
Sbjct: 1188 LEGHGGWVQSVAFSPDGQRVASGSSDKTIKIW--DTASG-TCTQTLEGHGGWVQSVAF-- 1243

BLAST of Cucsat.G11095.T1 vs. ExPASy Swiss-Prot
Match: Q8YTC2 (Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr2800 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.4e-19
Identity = 78/285 (27.37%), Postives = 127/285 (44.56%), Query Frame = 0

Query: 48  CVNDAASGSVKSIAFGP--WKVFTAHQDCKIRVWKVTRSGPPCHRLLATLPTVKDRLYRF 107
           CV     G++ S AF P    + T   DC +RVW+V +SG      L  +        RF
Sbjct: 636 CVFTETLGNILSAAFSPEGQLLATCDTDCHVRVWEV-KSGK-----LLLICRGHSNWVRF 695

Query: 108 I--SPRNYVHVRRHRKRLWIEHWDAVSGVVV-----------------NGGFVYSVSWDR 167
           +  SP   +          ++ W    GV +                 +G  + S S D+
Sbjct: 696 VVFSPDGEILASCGADEN-VKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDK 755

Query: 168 SLKVWSASDHKCLLSVKAHEDAVNAVAVGQNG-VVYTGSADGVIGVWEVREGKKKKKYTL 227
           ++K+W   D  CL ++  H D V  VA   +G  + + +AD  I +W+V +GK       
Sbjct: 756 TIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGK------C 815

Query: 228 VRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVWKKEDGGKKISFVEDLWGHQGAVLCL 287
           +RTL +H   V ++  +  G+ + SGS DR+I +W    G    +++    GH  +V  +
Sbjct: 816 LRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYI----GHTNSVYSI 875

Query: 288 YTFRD--LLVSGSEDRTLRIWRGDVTNGYRCTTVVDGHRSPVKSL 309
               D  +LVSGS DRT+++W       + C   + GH + V S+
Sbjct: 876 AYSPDSKILVSGSGDRTIKLWD---CQTHICIKTLHGHTNEVCSV 900

BLAST of Cucsat.G11095.T1 vs. ExPASy Swiss-Prot
Match: Q86TI4 (WD repeat-containing protein 86 OS=Homo sapiens OX=9606 GN=WDR86 PE=2 SV=3)

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-17
Identity = 72/280 (25.71%), Postives = 115/280 (41.07%), Query Frame = 0

Query: 55  GSVKSIAFGP--WKVFTAHQDCKIRVWKVTRSGPPC-----HRLLATLPTVKDRLYRFIS 114
           G +  ++  P   ++ T  +D   R+W  T  G  C     H    T   ++D      S
Sbjct: 16  GGINWLSLSPDGQRLLTGSEDGTARLWS-TADGQCCALLQGHESYVTFCQLEDEAAFTCS 75

Query: 115 P----RNYVHVRRHRKRLWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVK 174
                R +  +     +++  H   V+ ++V    ++S S+DR+ +VWS    +     +
Sbjct: 76  ADCTIRRWDVLTGQCLQVYRGHTSIVNRILVANNQLFSSSYDRTARVWSVDKGQMSREFR 135

Query: 175 AHEDAVNAVA---------------VGQNGVVYTGSADGVIGVWEVREGKKKKKYTLVRT 234
            H + V  +A                   G++ TGS DG   VW+V  G         +T
Sbjct: 136 GHRNCVLTLAYSAPWDLPSTPCAEEAAAGGLLVTGSTDGTAKVWQVASG------CCHQT 195

Query: 235 LNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVWKKEDGGKKISFVEDLWGHQGAVLCLYTF 294
           L  H   V  +VL+  G   F+GS+D +I  W    G +   F E    H+G+V+CL   
Sbjct: 196 LRGHTGAVLCLVLDTPGHTAFTGSTDATIRAWDILSGEQLRVFRE----HRGSVICLELV 255

Query: 295 RDLLVSGSEDRTLRIWRGDVTNGYRCTTVVDGHRSPVKSL 309
             L+ SGS DRT++ W  D      C      HR  V +L
Sbjct: 256 NRLVYSGSADRTVKCWLADTG---ECVRTFTAHRRNVSAL 281

BLAST of Cucsat.G11095.T1 vs. ExPASy Swiss-Prot
Match: Q61FW2 (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis briggsae OX=6238 GN=sel-10 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-16
Identity = 64/199 (32.16%), Postives = 98/199 (49.25%), Query Frame = 0

Query: 134 VNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNG-VVYTGSADGVIGVW 193
           ++   + + S D +LKVWS  D +   ++  H   V    + Q G  + +GS D  + VW
Sbjct: 266 IHNDLLVTGSDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQCGRYIVSGSTDRTVKVW 325

Query: 194 EVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVWKKEDGGKKISFV 253
              +G       L+ TL  H STV  + +      + +GS D ++ VW  E G      V
Sbjct: 326 RAEDG------FLLHTLQGHTSTVRCMAM--ANTTLVTGSRDCTLRVWDIETG----LHV 385

Query: 254 EDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVDGHRSPVKSLVLVS 313
             L GHQ AV C+    +++VSG  D T++IW  D  +G +C   + GH + V SL+   
Sbjct: 386 RTLQGHQAAVRCVQFDGNIVVSGGYDFTVKIW--DAFSG-KCLRTLIGHSNRVYSLLY-- 444

Query: 314 VEDGERSLMICSASLDGEI 332
             + ERS+ +CS SLD  I
Sbjct: 446 --ESERSI-VCSGSLDTSI 444

BLAST of Cucsat.G11095.T1 vs. NCBI nr
Match: XP_004138262.2 (protein JINGUBANG [Cucumis sativus] >KAE8652387.1 hypothetical protein Csa_013987 [Cucumis sativus])

HSP 1 Score: 679 bits (1751), Expect = 5.10e-246
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0

Query: 1   TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 60
           TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI
Sbjct: 20  TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 79

Query: 61  AFGPWKVFTAHQDCKIRVWKVTRSGPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRKR 120
           AFGPWKVFTAHQDCKIRVWKVTRSGPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRKR
Sbjct: 80  AFGPWKVFTAHQDCKIRVWKVTRSGPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRKR 139

Query: 121 LWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGVV 180
           LWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGVV
Sbjct: 140 LWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGVV 199

Query: 181 YTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVW 240
           YTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVW
Sbjct: 200 YTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVW 259

Query: 241 KKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVDG 300
           KKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVDG
Sbjct: 260 KKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVDG 319

Query: 301 HRSPVKSLVLVSVEDGERSLMICSASLDGEI 331
           HRSPVKSLVLVSVEDGERSLMICSASLDGEI
Sbjct: 320 HRSPVKSLVLVSVEDGERSLMICSASLDGEI 350

BLAST of Cucsat.G11095.T1 vs. NCBI nr
Match: XP_008464566.1 (PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis melo])

HSP 1 Score: 631 bits (1628), Expect = 1.96e-227
Identity = 313/335 (93.43%), Postives = 319/335 (95.22%), Query Frame = 0

Query: 1   TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 60
           TPL IATLTTPN ATCLAAHNGLLYSGATNQI VFDITN FTQIDTLCVNDAASGSVKSI
Sbjct: 6   TPLTIATLTTPNIATCLAAHNGLLYSGATNQIAVFDITNDFTQIDTLCVNDAASGSVKSI 65

Query: 61  AFGPWKVFTAHQDCKIRVWKVTRS-GPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRK 120
           AFGPWK+FTAHQDCKIRVWK+TRS GPP HRLLATLPTVKDRLYRFISP NYVHVRRHRK
Sbjct: 66  AFGPWKIFTAHQDCKIRVWKITRSAGPPRHRLLATLPTVKDRLYRFISPGNYVHVRRHRK 125

Query: 121 RLWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGV 180
           RLWIEHWDAVSGVVVNGGFVYSVSWDRS KVWSASDHKCLLSVKAHEDAVNAVAVG NGV
Sbjct: 126 RLWIEHWDAVSGVVVNGGFVYSVSWDRSFKVWSASDHKCLLSVKAHEDAVNAVAVGPNGV 185

Query: 181 VYTGSADGVIGVWEVREGKKKKK---YTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRS 240
           VYTGSADGVIGVWEVREGKKKKK   YTLVRTL+NHKSTVNAI LNEGG AMFSGSSDRS
Sbjct: 186 VYTGSADGVIGVWEVREGKKKKKKKKYTLVRTLHNHKSTVNAIALNEGGWAMFSGSSDRS 245

Query: 241 IMVWKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTT 300
           IMVWKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRG+VTNGY CT+
Sbjct: 246 IMVWKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGEVTNGYVCTS 305

Query: 301 VVDGHRSPVKSLVLVSVEDGERSLMICSASLDGEI 331
           V+DGHRSPVKSLVLVSVEDGERS MICSASLDGEI
Sbjct: 306 VMDGHRSPVKSLVLVSVEDGERSFMICSASLDGEI 340

BLAST of Cucsat.G11095.T1 vs. NCBI nr
Match: TYJ98486.1 (vegetative incompatibility protein HET-E-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 583 bits (1502), Expect = 1.23e-208
Identity = 292/332 (87.95%), Postives = 297/332 (89.46%), Query Frame = 0

Query: 1   TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 60
           TPL IATLTTPN ATCLAAHNGLLYSGATNQI VFDITN FTQIDTLCVNDAASGSVKSI
Sbjct: 6   TPLTIATLTTPNIATCLAAHNGLLYSGATNQIAVFDITNDFTQIDTLCVNDAASGSVKSI 65

Query: 61  AFGPWKVFTAHQDCKIRVWKVTRS-GPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRK 120
           AFGPWK+FTAHQDCKIRVWK+TRS GPP HRLLATLPTVKDRLYRFISP NYVHVRRHRK
Sbjct: 66  AFGPWKIFTAHQDCKIRVWKITRSAGPPRHRLLATLPTVKDRLYRFISPGNYVHVRRHRK 125

Query: 121 RLWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGV 180
           RLWIEHWDAVSGVVVNGGFVYSVSWDRS KVWSASDHKCLLSVKAHEDAVNAVAVG NGV
Sbjct: 126 RLWIEHWDAVSGVVVNGGFVYSVSWDRSFKVWSASDHKCLLSVKAHEDAVNAVAVGPNGV 185

Query: 181 VYTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMV 240
           VYTGSADGVIGVWEV                      NAI LNEGG AMFSGSSDRSIMV
Sbjct: 186 VYTGSADGVIGVWEV----------------------NAIALNEGGWAMFSGSSDRSIMV 245

Query: 241 WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVD 300
           WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRG+VTNGY CT+V+D
Sbjct: 246 WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGEVTNGYVCTSVMD 305

Query: 301 GHRSPVKSLVLVSVEDGERSLMICSASLDGEI 331
           GHRSPVKSLVLVSVEDGERS MICSASLDGEI
Sbjct: 306 GHRSPVKSLVLVSVEDGERSFMICSASLDGEI 315

BLAST of Cucsat.G11095.T1 vs. NCBI nr
Match: KAA0057802.1 (vegetative incompatibility protein HET-E-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 581 bits (1498), Expect = 5.02e-208
Identity = 291/332 (87.65%), Postives = 297/332 (89.46%), Query Frame = 0

Query: 1   TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 60
           TPL IATLTTPN ATCLAAHNGLLYSGATNQI VFDITN FTQIDTLCVNDAASGSVKSI
Sbjct: 6   TPLTIATLTTPNIATCLAAHNGLLYSGATNQIAVFDITNDFTQIDTLCVNDAASGSVKSI 65

Query: 61  AFGPWKVFTAHQDCKIRVWKVTRSG-PPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRK 120
           AFGPWK+FTAHQDCKIRVWK+TRSG PP HRLLATLPTVKDRLYRFISP NYVHVRRHRK
Sbjct: 66  AFGPWKIFTAHQDCKIRVWKITRSGGPPRHRLLATLPTVKDRLYRFISPGNYVHVRRHRK 125

Query: 121 RLWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGV 180
           RLWIEHWDAVSGVVVNGGFVYSVSWDRS KVWSASDHKCLLSVKAHEDAVNAVAVG NGV
Sbjct: 126 RLWIEHWDAVSGVVVNGGFVYSVSWDRSFKVWSASDHKCLLSVKAHEDAVNAVAVGPNGV 185

Query: 181 VYTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMV 240
           VYTGSADGVIGVWEV                      NAI LNEGG AMFSGSSDRSIMV
Sbjct: 186 VYTGSADGVIGVWEV----------------------NAIALNEGGWAMFSGSSDRSIMV 245

Query: 241 WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVD 300
           WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRG+VTNG+ CT+V+D
Sbjct: 246 WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGEVTNGFVCTSVMD 305

Query: 301 GHRSPVKSLVLVSVEDGERSLMICSASLDGEI 331
           GHRSPVKSLVLVSVEDGERS MICSASLDGEI
Sbjct: 306 GHRSPVKSLVLVSVEDGERSFMICSASLDGEI 315

BLAST of Cucsat.G11095.T1 vs. NCBI nr
Match: XP_038880325.1 (protein JINGUBANG-like [Benincasa hispida])

HSP 1 Score: 573 bits (1476), Expect = 3.16e-204
Identity = 281/331 (84.89%), Postives = 302/331 (91.24%), Query Frame = 0

Query: 1   TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 60
           TP R+ATLTT NT TCLAAHNGLLYSG+TNQITVFD+TN FTQIDTL +NDAASGSVKSI
Sbjct: 17  TPHRVATLTTQNT-TCLAAHNGLLYSGSTNQITVFDLTNGFTQIDTLRINDAASGSVKSI 76

Query: 61  AFGPWKVFTAHQDCKIRVWKVTRSGPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRKR 120
           AFGPWK+FTAHQDCKIRVWK+TRSGPP HRLL TLPTVKDRLYRFISP NYV VRRH KR
Sbjct: 77  AFGPWKIFTAHQDCKIRVWKITRSGPPRHRLLTTLPTVKDRLYRFISPGNYVRVRRHHKR 136

Query: 121 LWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGVV 180
           LWIEHWDAVSGVVVNGGFVYSVSWDRS KVWSASDHKCLLSVKAH+DAVNAVAV  NGVV
Sbjct: 137 LWIEHWDAVSGVVVNGGFVYSVSWDRSFKVWSASDHKCLLSVKAHDDAVNAVAVSHNGVV 196

Query: 181 YTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVW 240
           YTGSADGVIGVW++REGKKKK YTLVR+L+NHKSTVNAIVLNEGG  MFSGSSDRSIMVW
Sbjct: 197 YTGSADGVIGVWQIREGKKKK-YTLVRSLDNHKSTVNAIVLNEGGWTMFSGSSDRSIMVW 256

Query: 241 KKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVDG 300
           K+E+ GK I+FVE LWGHQGAVLCLY+ RD LVSGSEDRTLRIWRGD+ NGY+C T++DG
Sbjct: 257 KREEVGKHIAFVETLWGHQGAVLCLYSLRDFLVSGSEDRTLRIWRGDLANGYQCMTLIDG 316

Query: 301 HRSPVKSLVLVSVEDGERSLMICSASLDGEI 331
           HRSPVKSLV V  +   RSLMICSASLDG+I
Sbjct: 317 HRSPVKSLVAVGTD--HRSLMICSASLDGQI 343

BLAST of Cucsat.G11095.T1 vs. ExPASy TrEMBL
Match: A0A0A0LNS4 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G002840 PE=4 SV=1)

HSP 1 Score: 679 bits (1751), Expect = 1.46e-246
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0

Query: 1   TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 60
           TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI
Sbjct: 6   TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 65

Query: 61  AFGPWKVFTAHQDCKIRVWKVTRSGPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRKR 120
           AFGPWKVFTAHQDCKIRVWKVTRSGPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRKR
Sbjct: 66  AFGPWKVFTAHQDCKIRVWKVTRSGPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRKR 125

Query: 121 LWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGVV 180
           LWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGVV
Sbjct: 126 LWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGVV 185

Query: 181 YTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVW 240
           YTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVW
Sbjct: 186 YTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMVW 245

Query: 241 KKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVDG 300
           KKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVDG
Sbjct: 246 KKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVDG 305

Query: 301 HRSPVKSLVLVSVEDGERSLMICSASLDGEI 331
           HRSPVKSLVLVSVEDGERSLMICSASLDGEI
Sbjct: 306 HRSPVKSLVLVSVEDGERSLMICSASLDGEI 336

BLAST of Cucsat.G11095.T1 vs. ExPASy TrEMBL
Match: A0A1S3CNB8 (vegetative incompatibility protein HET-E-1-like OS=Cucumis melo OX=3656 GN=LOC103502407 PE=4 SV=1)

HSP 1 Score: 631 bits (1628), Expect = 9.51e-228
Identity = 313/335 (93.43%), Postives = 319/335 (95.22%), Query Frame = 0

Query: 1   TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 60
           TPL IATLTTPN ATCLAAHNGLLYSGATNQI VFDITN FTQIDTLCVNDAASGSVKSI
Sbjct: 6   TPLTIATLTTPNIATCLAAHNGLLYSGATNQIAVFDITNDFTQIDTLCVNDAASGSVKSI 65

Query: 61  AFGPWKVFTAHQDCKIRVWKVTRS-GPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRK 120
           AFGPWK+FTAHQDCKIRVWK+TRS GPP HRLLATLPTVKDRLYRFISP NYVHVRRHRK
Sbjct: 66  AFGPWKIFTAHQDCKIRVWKITRSAGPPRHRLLATLPTVKDRLYRFISPGNYVHVRRHRK 125

Query: 121 RLWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGV 180
           RLWIEHWDAVSGVVVNGGFVYSVSWDRS KVWSASDHKCLLSVKAHEDAVNAVAVG NGV
Sbjct: 126 RLWIEHWDAVSGVVVNGGFVYSVSWDRSFKVWSASDHKCLLSVKAHEDAVNAVAVGPNGV 185

Query: 181 VYTGSADGVIGVWEVREGKKKKK---YTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRS 240
           VYTGSADGVIGVWEVREGKKKKK   YTLVRTL+NHKSTVNAI LNEGG AMFSGSSDRS
Sbjct: 186 VYTGSADGVIGVWEVREGKKKKKKKKYTLVRTLHNHKSTVNAIALNEGGWAMFSGSSDRS 245

Query: 241 IMVWKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTT 300
           IMVWKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRG+VTNGY CT+
Sbjct: 246 IMVWKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGEVTNGYVCTS 305

Query: 301 VVDGHRSPVKSLVLVSVEDGERSLMICSASLDGEI 331
           V+DGHRSPVKSLVLVSVEDGERS MICSASLDGEI
Sbjct: 306 VMDGHRSPVKSLVLVSVEDGERSFMICSASLDGEI 340

BLAST of Cucsat.G11095.T1 vs. ExPASy TrEMBL
Match: A0A5D3BHF9 (Vegetative incompatibility protein HET-E-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00880 PE=4 SV=1)

HSP 1 Score: 583 bits (1502), Expect = 5.97e-209
Identity = 292/332 (87.95%), Postives = 297/332 (89.46%), Query Frame = 0

Query: 1   TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 60
           TPL IATLTTPN ATCLAAHNGLLYSGATNQI VFDITN FTQIDTLCVNDAASGSVKSI
Sbjct: 6   TPLTIATLTTPNIATCLAAHNGLLYSGATNQIAVFDITNDFTQIDTLCVNDAASGSVKSI 65

Query: 61  AFGPWKVFTAHQDCKIRVWKVTRS-GPPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRK 120
           AFGPWK+FTAHQDCKIRVWK+TRS GPP HRLLATLPTVKDRLYRFISP NYVHVRRHRK
Sbjct: 66  AFGPWKIFTAHQDCKIRVWKITRSAGPPRHRLLATLPTVKDRLYRFISPGNYVHVRRHRK 125

Query: 121 RLWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGV 180
           RLWIEHWDAVSGVVVNGGFVYSVSWDRS KVWSASDHKCLLSVKAHEDAVNAVAVG NGV
Sbjct: 126 RLWIEHWDAVSGVVVNGGFVYSVSWDRSFKVWSASDHKCLLSVKAHEDAVNAVAVGPNGV 185

Query: 181 VYTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMV 240
           VYTGSADGVIGVWEV                      NAI LNEGG AMFSGSSDRSIMV
Sbjct: 186 VYTGSADGVIGVWEV----------------------NAIALNEGGWAMFSGSSDRSIMV 245

Query: 241 WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVD 300
           WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRG+VTNGY CT+V+D
Sbjct: 246 WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGEVTNGYVCTSVMD 305

Query: 301 GHRSPVKSLVLVSVEDGERSLMICSASLDGEI 331
           GHRSPVKSLVLVSVEDGERS MICSASLDGEI
Sbjct: 306 GHRSPVKSLVLVSVEDGERSFMICSASLDGEI 315

BLAST of Cucsat.G11095.T1 vs. ExPASy TrEMBL
Match: A0A5A7UPL5 (Vegetative incompatibility protein HET-E-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00850 PE=4 SV=1)

HSP 1 Score: 581 bits (1498), Expect = 2.43e-208
Identity = 291/332 (87.65%), Postives = 297/332 (89.46%), Query Frame = 0

Query: 1   TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 60
           TPL IATLTTPN ATCLAAHNGLLYSGATNQI VFDITN FTQIDTLCVNDAASGSVKSI
Sbjct: 6   TPLTIATLTTPNIATCLAAHNGLLYSGATNQIAVFDITNDFTQIDTLCVNDAASGSVKSI 65

Query: 61  AFGPWKVFTAHQDCKIRVWKVTRSG-PPCHRLLATLPTVKDRLYRFISPRNYVHVRRHRK 120
           AFGPWK+FTAHQDCKIRVWK+TRSG PP HRLLATLPTVKDRLYRFISP NYVHVRRHRK
Sbjct: 66  AFGPWKIFTAHQDCKIRVWKITRSGGPPRHRLLATLPTVKDRLYRFISPGNYVHVRRHRK 125

Query: 121 RLWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQNGV 180
           RLWIEHWDAVSGVVVNGGFVYSVSWDRS KVWSASDHKCLLSVKAHEDAVNAVAVG NGV
Sbjct: 126 RLWIEHWDAVSGVVVNGGFVYSVSWDRSFKVWSASDHKCLLSVKAHEDAVNAVAVGPNGV 185

Query: 181 VYTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRSIMV 240
           VYTGSADGVIGVWEV                      NAI LNEGG AMFSGSSDRSIMV
Sbjct: 186 VYTGSADGVIGVWEV----------------------NAIALNEGGWAMFSGSSDRSIMV 245

Query: 241 WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTTVVD 300
           WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRG+VTNG+ CT+V+D
Sbjct: 246 WKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGEVTNGFVCTSVMD 305

Query: 301 GHRSPVKSLVLVSVEDGERSLMICSASLDGEI 331
           GHRSPVKSLVLVSVEDGERS MICSASLDGEI
Sbjct: 306 GHRSPVKSLVLVSVEDGERSFMICSASLDGEI 315

BLAST of Cucsat.G11095.T1 vs. ExPASy TrEMBL
Match: A0A6J1E1M7 (protein JINGUBANG-like OS=Cucurbita moschata OX=3662 GN=LOC111429962 PE=4 SV=1)

HSP 1 Score: 546 bits (1406), Expect = 4.69e-194
Identity = 273/335 (81.49%), Postives = 298/335 (88.96%), Query Frame = 0

Query: 1   TPLRIATLTTPNTATCLAAHNGLLYSGATNQITVFDITNHFTQIDTLCVNDAASGSVKSI 60
           TP ++ATLTTPNT+ CLAAHNGLLYSG+TNQI VFD+TN FTQIDTL  NDAASGSVKSI
Sbjct: 6   TPFKLATLTTPNTS-CLAAHNGLLYSGSTNQIAVFDLTN-FTQIDTLRTNDAASGSVKSI 65

Query: 61  AFGPWKVFTAHQDCKIRVWKVT----RSGPPCHRLLATLPTVKDRLYRFISPRNYVHVRR 120
           AFG WK+FTAHQDCKIRVWK+T    R G   HRLLATLPTVKD+LYRFISP NYVHVRR
Sbjct: 66  AFGRWKIFTAHQDCKIRVWKITCSKRRHG---HRLLATLPTVKDKLYRFISPSNYVHVRR 125

Query: 121 HRKRLWIEHWDAVSGVVVNGGFVYSVSWDRSLKVWSASDHKCLLSVKAHEDAVNAVAVGQ 180
           H KRLWIEHWDAVSG+VVN GFVYSVSWDRS KVWSASDHKCL SVKAH+DAVNAV VGQ
Sbjct: 126 HHKRLWIEHWDAVSGLVVNEGFVYSVSWDRSFKVWSASDHKCLSSVKAHDDAVNAVGVGQ 185

Query: 181 NGVVYTGSADGVIGVWEVREGKKKKKYTLVRTLNNHKSTVNAIVLNEGGRAMFSGSSDRS 240
           NGVVYTGSADGVIGVWE+REGK+KK + LVRTL+ HKST+NAI LNEGG  MFSGSSDRS
Sbjct: 186 NGVVYTGSADGVIGVWEIREGKQKK-HRLVRTLDKHKSTINAIALNEGGTVMFSGSSDRS 245

Query: 241 IMVWKKEDGGKKISFVEDLWGHQGAVLCLYTFRDLLVSGSEDRTLRIWRGDVTNGYRCTT 300
           IMVWKK++ GK+I FVE LWGH+GAVLCLY+ RDLLVSGSEDRT+RIWRGDVTNGY+CT 
Sbjct: 246 IMVWKKDEAGKQIGFVEALWGHEGAVLCLYSVRDLLVSGSEDRTVRIWRGDVTNGYQCTA 305

Query: 301 VVDGHRSPVKSLVLVSVEDGERSLMICSASLDGEI 331
           V++GHRSPVKSLV+V    GER LMICSASLDGEI
Sbjct: 306 VMEGHRSPVKSLVVVGA--GERCLMICSASLDGEI 332

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O487166.2e-6040.06Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1[more]
Q008082.4e-1929.15Vegetative incompatibility protein HET-E-1 OS=Podospora anserina OX=2587412 GN=H... [more]
Q8YTC22.4e-1927.37Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7... [more]
Q86TI41.7e-1725.71WD repeat-containing protein 86 OS=Homo sapiens OX=9606 GN=WDR86 PE=2 SV=3[more]
Q61FW21.1e-1632.16F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis briggsae OX=6238 GN=... [more]
Match NameE-valueIdentityDescription
XP_004138262.25.10e-246100.00protein JINGUBANG [Cucumis sativus] >KAE8652387.1 hypothetical protein Csa_01398... [more]
XP_008464566.11.96e-22793.43PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis melo][more]
TYJ98486.11.23e-20887.95vegetative incompatibility protein HET-E-1-like [Cucumis melo var. makuwa][more]
KAA0057802.15.02e-20887.65vegetative incompatibility protein HET-E-1-like [Cucumis melo var. makuwa][more]
XP_038880325.13.16e-20484.89protein JINGUBANG-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A0A0LNS41.46e-246100.00WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G... [more]
A0A1S3CNB89.51e-22893.43vegetative incompatibility protein HET-E-1-like OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3BHF95.97e-20987.95Vegetative incompatibility protein HET-E-1-like OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7UPL52.43e-20887.65Vegetative incompatibility protein HET-E-1-like OS=Cucumis melo var. makuwa OX=1... [more]
A0A6J1E1M74.69e-19481.49protein JINGUBANG-like OS=Cucurbita moschata OX=3662 GN=LOC111429962 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 272..286
score: 37.72
coord: 180..194
score: 31.85
coord: 228..242
score: 30.3
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 108..152
e-value: 19.0
score: 8.9
coord: 1..36
e-value: 89.0
score: 4.7
coord: 155..193
e-value: 9.9E-6
score: 35.0
coord: 248..285
e-value: 5.8E-4
score: 29.2
coord: 43..80
e-value: 1.7
score: 15.6
coord: 202..241
e-value: 1.3E-5
score: 34.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 257..284
e-value: 0.0016
score: 19.2
coord: 205..241
e-value: 0.0075
score: 17.1
coord: 157..192
e-value: 0.05
score: 14.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 255..284
score: 10.374778
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 162..202
score: 11.64467
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 209..241
score: 12.580379
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 91..201
e-value: 1.4E-15
score: 58.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..90
e-value: 1.1E-6
score: 29.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 202..331
e-value: 5.9E-21
score: 77.2
NoneNo IPR availablePANTHERPTHR22844:SF324TRANSDUCIN/WD40 REPEAT PROTEINcoord: 8..331
NoneNo IPR availablePANTHERPTHR22844F-BOX AND WD40 DOMAIN PROTEINcoord: 8..331
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 162..198
score: 9.09833
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 255..284
score: 8.729241
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 209..241
score: 10.469233
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 180..194
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 13..330

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G11095Cucsat.G11095gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G11095.T1.E1Cucsat.G11095.T1.E1exon
Cucsat.G11095.T1.E2Cucsat.G11095.T1.E2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G11095.T1.C2Cucsat.G11095.T1.C2CDS
Cucsat.G11095.T1.C1Cucsat.G11095.T1.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G11095.T1Cucsat.G11095.T1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0016491 oxidoreductase activity