Cucsat.G11076.T29 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGTTCCACCTTTAGTCTCCTTGCTTGTCCTCACGGCCACGGCGGTTCTGAAAGACGAAAATTTCAGCAAAGCAAATGATGGGTATCGAAATTTGTGGAAAAATAGACAAAGTAAATGGGAAAGGACTGAGTTATAAGGAATTTGTAGAACGATACATGGAGAAGAACAAACCTGTGGTGTTGACAGGTCTCATGGATGATTGGAAGGCTTGCAGTGATTGGGTCGACGAGAATGGGCAGCCAAATCTAAGTTTCTTTTCCACCCATTTCGGGAAATCCAGGGTACAGGTACTAAAATTTCTGCTTGAATATGATCTTTTTGGTTCTGATTGTCCCAGCTTAATTTTCATATGTATTCTTTTTTGTCTAATCTCACTTCAGCATGATGTATTGTAATTCAAATTCTCAGTGCATCCGGGGATTTTATTCAGTGGAATTAGTGGGTTGGTTTTATTCATGCATTTCAACTTGTAAGGAAGAGTCTTGTTCTTGCATCTCTTATTACTTGTGTGGGGAGTAGTTCTTCAATGAATTGTTCCATTTTATTGTTATTGGTAAACCTGAAATGATGCAAAAAGGATCAGTCTTGTTTGTCTCACTAACCATACATTTTTTCTCCCTTGGTGCATTATGACTACTGCGTTCCAGTCTCCCTCATTTGCAATCTCCGACTCTTACCATAAAAAACAAAGTAAGAGGAAATGGAACAATGATTTCAATGTGATTGAGCTATCACAGTTAGTTGATGTGTCCATGCTTATGTACCACTAATGGGAATACGTTTCCTATAGTGAAACTTGTCTATTCATGTTCAACTACTCTAAAGAAAGAGTTTTAAGTTTGTGTTCCACTTTTTAGGAGGTCAGATAATCATTTGGCACTTTTAGGTTGCAGATTGCAGTACTAAAGAATTTACAGATCAGAAGAGAGTAGAAATGTCTGTTTCAGAGTTCATTGATCAATGGTGTAAGGAGCCCATACAGGAGCATGGCCTTAGCTCAAACAATGGACTTACTGACAAGTCTGTACTATACTTGAAAGACTGGCATTTTGTGAAGGTGTAAGCGTCTACTTCTTTTTTCCCTTCATTTTTTTGTTTGTGTTTGAACTCATGGATATATATGTCTATAAGGAACATCAAATTGTAGACCTAAGGAAGTCCATCATGTAATGCTTCTAGTGTTGAATTATCAGGTTAAATGGTTGTTTGGAACACATGTAGAAGACGAACACGGCTCTTTTAACCCCACGTGATGTTGCTTTGTACACCTTAATTGAAGCATGTTTTATTAAGAGGTGCATTTTTTAGGATAGAGTTACTATTTGTGTGGACAAGTGGGTTGGAACACAGTTCATCTCATAGCTTAACTTTGAATCCGAACTATGAAAAAGCTTAGGAACATCCTTCTTTTTGAACCGGTGGAAATGTCTTCGCATGGTTTCTCCAGATATCCTACAAATAGAATTTTGTATTCAACGTTCATTGTCCAGTAATTAAGAGTCTATGAGTATCCTGCTTAACTTCTCCTTGAATAAGCCCGCATATAGTGGACACACACCCATACTCATGTTTTCCTAAATTGCCTGCTATTGACTAGTTGCGTCATTTTCTTAAATTTCCATGCTGGATTGATCTTTACATTATCATCTTGCATTATCATTGTTTGAAACATGATGCAATAACGTTTTTACTGAATGACTGTCCAGTGTCAAATCATGGGCTTTATTTGTTAGAGAATAGCTAGATGTGTGGTCTCACATGTTTTCCTATCCTTCTTGATGTGATTCTCAGGAATATCTAAATTATACAGCATATTCAACTCCACACTTTGTTTGTGATGACTGGCTGAACCTATACCTTGACAGCTACCGTATGCACAGGGATCCTGACTCTTACCAAGAGAAAGATGAAATAAGTTGCTCCGACTATCGTTTCGTTTACATGGGAGCAAAAGGTGCCATCATATATAACTCATGCACTTTTTAAAAATTTTTGCCCTCATCAAAACTTATGCGTGGTTCTTGGTTAGGTTCTTGGACTCCACTTCATGCTGACGTTTTCAGGTCATACAGCTGGTCAGCAAATGTTTGTGGAAAGAAACAGTGGTTTCTTTTGCCTCCTTCTCAGTCTCATCTTGTATTCGACAGGCATGAACATAGTTTTGTTATTTTGCACTTTCTTGTTAACTGATGGTTCAATGTGTTGGATTTTAAACTTGTTGTAATTTTGTAAGTAACCTCCAATTTATATTCTGAAGGGACTTGGTGGGCTTGAATAACTACCTATTTCCATTACATTAGTACTTGAGATTGAGAAGAGAAAAGTGACGGAAAATATGCTAAAACTCTAAGCTGAAAAGAACCTATGAGTTGTCTTTTAGTTTTTCAAGAGAATTTCTTCAATATGTAAATGTGGGAATGATACGATCTTTATCACATCCTACATTTAGAGCCATTCGATATCTTGTAGCCTGCCTGTCTATTCCAATACAATAATCCCCCCCACCAAATGCAATGCTTATCTTTGGGCTTTTTGTCGCTGTTTCCTCTTTTTCTAACTTCTTGTTTATATTTTCAGGAATATGAAGGCCTGTATTTATAATATCTTTGATGATATAAGTGAATATTTGTTTCCGGGTTTTAAGAAGGTATATATGATTGCATATGCTAAACCTCTTCTCCTTCTATTTCTTGAATATATCAGCTTTTTCCATGTTCATTTGTTTATCATTGTGCAGGCTACCTGGTTGGAATGTATTCAAGAACAGAACGAAATTATATTTGTGCCAAGTGGCTGGTATCATCAAGTTCATAATCTGGTATTATACTTCATTTATTTTTATGTCCTTGTGGTGCAAATTAATTTGTATTGTTCATGGTTTTAGGTCTCGTTATTTTATGATTAGCAATTGTACTTGTTCCACTATGGTAGATTGCTTGAATTATCTTTTACGCTCTCAACCTCTCTCCGATTATTATTTCTCAACGGATGCTTGATTCAGTTTGCTTTTTCTTTTTCTAAAGATTTTTTAACTTTGAGGTTCTTCTATATTTTCCATCATAGTTTTGTCTCAACAACCATTCTATCTTTTGATATGTGAATGCTTTCAGGATGACACCGTATCAATAAACCACAATTGGTTTAACTCCTACAATCTCTGTTGGGTGGTAAGGATTGCTATCATAGGCTTTACAGAATCTTTGTTCGTCACTTGATAAACAATATTTTGATCCTACCGGCCTGTTCTCTGCTCTGAATTTTCATTCTTTTAGTTGGACTTGATGTTGCGGGACTATAATGAAGCCAAGGAGTACATAGAAGACATTAGAGATATATGTGATGATTTTGAAGGTCTCTGTCAGCGCAACCTTGCAGCTAACACAGGTAGCATAAAGTTTTAGATCACTGTGTATAGTAACTTAGTCGATGATTGAATCAACATTCTAACATTCTGACCAGGTATACAAAGTTGCATTGAGTAAACTGCCAAAACAACTAGATCGTGTATCAATAATTCAATTCATATACAATATCTTATTATCTAGTTTAAGTTAGAGCTGGACATATACTTTCAAATCTTTAACCAGCTTATTGAGATCAGAGCATCATTAGGGAGCAAGCTCTTAAGAACTCCCGTTTTCTCATTATTAGAAGTTTTCAGTGGAAAGCCTTCTACGATGCATACGCTGATAGTATTAAGGAAGGAATGTGCATCCACACTTTACCATTGATGTAATTTATACTGTTTTTTGCTCTTCTTTCAGGCATGAACTTCTATGACTTTTTCATCTTCTTAGCACGCTTTTCGCTCGCGAATTCGGTGGTACTTGACACTCTAGCTAGAGATGCTGAAAATATTGCTGGAATTGGGAGCATATCTCCAATAATTCAGCAGTTGGTTCAGAATCTTTCTTCAATACAGAAGATTGCCTTGAAAATGAAATTCCTGGAATGTTTTTCAGGAGACCAAGGATTCATGTTGGATCTAGTAGAAACACACAAAAATCCCAAGTTTTCTAAACTTTGTTATTCATTAATTCGAACTTGTGAGTCCATACACAATCGACAAGTTTTGAGCTTTTGCTCAAAGACAGTCGCAACACAAGATTCTAGGACTTCGATAGTCATTCAAAACTTTTGTGATGCTGTTTCGTCTCCCCAAGATCTTGTCAAATATATCGACACAGTCTTAACTGAACACACAAGCATAGAATCATCGGAATGATTGTTCTCATTTCCTCATACACAAACTGATTCTCAAGCTGGTTTTTAGACAACAGTGTGGTTCATCTTCATCTAGAAGGCATTTGAGAAATGAGAAATCAAAATGAAATGAACTCCACCATTAGTGCTGGTCCTCCTGGCATTAAAGTGACAAATCTTGGGTACAGATTCTCTTTCTCTCTCATGATTGGATCATTGCATTGATTCAAAAAAAAGAAAGAGAAACAAGAGGTTAGTAGTCTGTGGTTCGATTTGAAAGTGACCCCAGTGGTGGATCAGATTGTGGGAGCACCCACCAAAGATCACCATCTTTTATGGGCCTTCGCTTTCTATTTTTTTTTTTTTTTTCCTTTTTCCTGATCTGTCCTCATAAAGTGTTGTTTTCTTTTTATTTTGTTGGTAAAGCAAACTGTATTATTGTATGCCTTTTCAGTTCAGGCCAGTACACTAAGATGAGTGTCTGTGGTTAAAGTTTGTGGCACCAAGCAGTGGCATCCATTTCACTCTTCTCTTCACTTATTTCAACCTTCCTGTTTTCCGTTTCCACTGTTCTTCGTTCCCTCTCATCTCTTGTTTTCATTCCAATAATCTGTTTTGAACAAATCTTTGCAACTGTTTGATTTGTTTGGGGATGTGAGATTTCTGT ATGCGTGGTTCTTGGTTAGGTTCTTGGACTCCACTTCATGCTGACGTTTTCAGGTCATACAGCTGGTCAGCAAATGTTTGTGGAAAGAAACAGTGGTTTCTTTTGCCTCCTTCTCAGTCTCATCTTGTATTCGACAGGAATATGAAGGCCTGTATTTATAATATCTTTGATGATATAAGTGAATATTTGTTTCCGGGTTTTAAGAAGGCTACCTGGTTGGAATGTATTCAAGAACAGAACGAAATTATATTTGTGCCAAGTGGCTGGTATCATCAAGTTCATAATCTGGATGACACCGTATCAATAAACCACAATTGGTTTAACTCCTACAATCTCTGTTGGGTGTTGGACTTGATGTTGCGGGACTATAATGAAGCCAAGGAGTACATAGAAGACATTAGAGATATATGTGATGATTTTGAAGGTCTCTGTCAGCGCAACCTTGCAGCTAACACAGGCATGAACTTCTATGACTTTTTCATCTTCTTAGCACGCTTTTCGCTCGCGAATTCGGTGGTACTTGACACTCTAGCTAGAGATGCTGAAAATATTGCTGGAATTGGGAGCATATCTCCAATAATTCAGCAGTTGGTTCAGAATCTTTCTTCAATACAGAAGATTGCCTTGAAAATGAAATTCCTGGAATGTTTTTCAGGAGACCAAGGATTCATGTTGGATCTAGTAGAAACACACAAAAATCCCAAGTTTTCTAAACTTTGTTATTCATTAATTCGAACTTGTGAGTCCATACACAATCGACAAGTTTTGAGCTTTTGCTCAAAGACAGTCGCAACACAAGATTCTAGGACTTCGATAGTCATTCAAAACTTTTGTGATGCTGTTTCGTCTCCCCAAGATCTTGTCAAATATATCGACACAGTCTTAACTGAACACACAAGCATAGAATCATCGGAATGA MRGSWLGSWTPLHADVFRSYSWSANVCGKKQWFLLPPSQSHLVFDRNMKACIYNIFDDISEYLFPGFKKATWLECIQEQNEIIFVPSGWYHQVHNLDDTVSINHNWFNSYNLCWVLDLMLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNFYDFFIFLARFSLANSVVLDTLARDAENIAGIGSISPIIQQLVQNLSSIQKIALKMKFLECFSGDQGFMLDLVETHKNPKFSKLCYSLIRTCESIHNRQVLSFCSKTVATQDSRTSIVIQNFCDAVSSPQDLVKYIDTVLTEHTSIESSE Homology
BLAST of Cucsat.G11076.T29 vs. ExPASy Swiss-Prot
Match: Q08BY5 (2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Danio rerio OX=7955 GN=jmjd4 PE=2 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.9e-35 Identity = 78/184 (42.39%), Postives = 112/184 (60.87%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. ExPASy Swiss-Prot
Match: Q9H9V9 (2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Homo sapiens OX=9606 GN=JMJD4 PE=1 SV=2) HSP 1 Score: 148.7 bits (374), Expect = 1.1e-34 Identity = 79/189 (41.80%), Postives = 114/189 (60.32%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. ExPASy Swiss-Prot
Match: Q8BFT6 (2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Mus musculus OX=10090 GN=Jmjd4 PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.0e-32 Identity = 68/176 (38.64%), Postives = 106/176 (60.23%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. ExPASy Swiss-Prot
Match: Q5ZHV5 (2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Gallus gallus OX=9031 GN=JMJD4 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.3e-32 Identity = 67/164 (40.85%), Postives = 103/164 (62.80%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. ExPASy Swiss-Prot
Match: Q9VJ97 (2-oxoglutarate and iron-dependent oxygenase JMJD4 homolog OS=Drosophila melanogaster OX=7227 GN=CG7200 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.9e-27 Identity = 67/171 (39.18%), Postives = 93/171 (54.39%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. NCBI nr
Match: XP_011655739.1 (2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X3 [Cucumis sativus]) HSP 1 Score: 618 bits (1594), Expect = 5.92e-222 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. NCBI nr
Match: XP_004138273.2 (2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X2 [Cucumis sativus] >KGN63564.2 hypothetical protein Csa_013850 [Cucumis sativus]) HSP 1 Score: 618 bits (1594), Expect = 1.40e-220 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. NCBI nr
Match: XP_031740132.1 (2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X1 [Cucumis sativus]) HSP 1 Score: 618 bits (1594), Expect = 2.15e-220 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. NCBI nr
Match: XP_008464541.1 (PREDICTED: jmjC domain-containing protein 4 isoform X2 [Cucumis melo]) HSP 1 Score: 579 bits (1492), Expect = 2.04e-206 Identity = 279/299 (93.31%), Postives = 285/299 (95.32%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. NCBI nr
Match: XP_008464540.1 (PREDICTED: jmjC domain-containing protein 4 isoform X1 [Cucumis melo]) HSP 1 Score: 579 bits (1492), Expect = 4.65e-205 Identity = 279/299 (93.31%), Postives = 285/299 (95.32%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. ExPASy TrEMBL
Match: A0A0A0LNV5 (JmjC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G004270 PE=4 SV=1) HSP 1 Score: 618 bits (1594), Expect = 2.56e-221 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. ExPASy TrEMBL
Match: A0A1S3CLQ0 (jmjC domain-containing protein 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502391 PE=4 SV=1) HSP 1 Score: 579 bits (1492), Expect = 9.87e-207 Identity = 279/299 (93.31%), Postives = 285/299 (95.32%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. ExPASy TrEMBL
Match: A0A1S3CLV6 (jmjC domain-containing protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502391 PE=4 SV=1) HSP 1 Score: 579 bits (1492), Expect = 2.25e-205 Identity = 279/299 (93.31%), Postives = 285/299 (95.32%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. ExPASy TrEMBL
Match: A0A6J1E0R3 (jmjC domain-containing protein 4 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111429764 PE=4 SV=1) HSP 1 Score: 523 bits (1346), Expect = 3.34e-183 Identity = 250/300 (83.33%), Postives = 269/300 (89.67%), Query Frame = 0
BLAST of Cucsat.G11076.T29 vs. ExPASy TrEMBL
Match: A0A6J1E455 (jmjC domain-containing protein 4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429764 PE=4 SV=1) HSP 1 Score: 523 bits (1346), Expect = 3.58e-183 Identity = 250/300 (83.33%), Postives = 269/300 (89.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|