Cucsat.G11076.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCTTTAATAAAATAGTATCTCCTCTAAAGAACTGCAACTTTTCCATGGTGGCAGGATGCAATGAAACGACAGAGTTATCATCATTTATAGCCTCATCAACAACTAAGCGATTTGGAGATTTCTTCCGTTCCAAAATTGCAGTGGAAAAATCCCGTTTAGTATTGTTCCTATTTCCAAACAAAAGGTTCGGAAATCAACACAATTCAGAGGTAAATTAATGTACCTGAACGTGCTTAAGCTCCATCTTCTCTCTTATCTAAATCCAATACATATTATGCTAATATCTTCCCCCATCCTAACCATCTCATAAAAAGAATTGCAGAAAAACTAAAATTTCCAGAACAGTTTTTGGAACATATGTAGCACCAACTTTTCACTTGTATGGAAGTAAGATAAAGCTAAAATCTCTATCAACCTATCTAGCCGTTTGAGAACCAGAAAAATTCAGAGGTAATTACTGGGCCTGAACAAGAACAATCAAGATTCTAAACGAAAACTTACTGGTCCGATGAAGAAGAGAGTTCCTGGCCCTTGTCTGAAGCCGAAGAACCTGTTGGGTCTGTCATCGTTTCGGTCTTTTGTGTTTTGAGCACCACAAGGGTTTCTGCAAGTTTTCAGACCACCGGTGCAATGCAGAAGGAAGATGCGAAGAAATAAAAAATAGATGACACTGTTGTATGGAAGACGGACAACCGACATAGCCCGTTTCCATAAAGACGTTGATACCAATCAGTTCTCTCCACCTACACATGAAACTAATGGCGGGTCGCCATGGAAGTAAAGCTATCGGTGAAGTAGGCGCCATTTTTCAGTAGCAGGTGAAACCAAAAAGAAAGCGTTTGACAAATTGCGGCTTTTATTCTGTTAGGATCCGCCATTGAATCTGGGCCTGGCCCAACTTAACCCAGCCCAATTTCATTGCTCGAGAAAAACAGAAGTACGGCTGCTACCGGCGATGTTCCACCTTTAGTCTCCTTGCTTGTCCTCACGGCCACGGCGGTTCTGAAAGACGAAAATTTCAGCAAAGCAAATGATGGGTATCGAAATTTGTGGAAAAATAGACAAAGTAAATGGGAAAGGACTGAGTTATAAGGAATTTGTAGAACGATACATGGAGAAGAACAAACCTGTGGTGTTGACAGGTCTCATGGATGATTGGAAGGCTTGCAGTGATTGGGTCGACGAGAATGGGCAGCCAAATCTAAGTTTCTTTTCCACCCATTTCGGGAAATCCAGGGTACAGGTACTAAAATTTCTGCTTGAATATGATCTTTTTGGTTCTGATTGTCCCAGCTTAATTTTCATATGTATTCTTTTTTGTCTAATCTCACTTCAGCATGATGTATTGTAATTCAAATTCTCAGTGCATCCGGGGATTTTATTCAGTGGAATTAGTGGGTTGGTTTTATTCATGCATTTCAACTTGTAAGGAAGAGTCTTGTTCTTGCATCTCTTATTACTTGTGTGGGGAGTAGTTCTTCAATGAATTGTTCCATTTTATTGTTATTGGTAAACCTGAAATGATGCAAAAAGGATCAGTCTTGTTTGTCTCACTAACCATACATTTTTTCTCCCTTGGTGCATTATGACTACTGCGTTCCAGTCTCCCTCATTTGCAATCTCCGACTCTTACCATAAAAAACAAAGTAAGAGGAAATGGAACAATGATTTCAATGTGATTGAGCTATCACAGTTAGTTGATGTGTCCATGCTTATGTACCACTAATGGGAATACGTTTCCTATAGTGAAACTTGTCTATTCATGTTCAACTACTCTAAAGAAAGAGTTTTAAGTTTGTGTTCCACTTTTTAGGAGGTCAGATAATCATTTGGCACTTTTAGGTTGCAGATTGCAGTACTAAAGAATTTACAGATCAGAAGAGAGTAGAAATGTCTGTTTCAGAGTTCATTGATCAATGGTGTAAGGAGCCCATACAGGAGCATGGCCTTAGCTCAAACAATGGACTTACTGACAAGTCTGTACTATACTTGAAAGACTGGCATTTTGTGAAGGTGTAAGCGTCTACTTCTTTTTTCCCTTCATTTTTTTGTTTGTGTTTGAACTCATGGATATATATGTCTATAAGGAACATCAAATTGTAGACCTAAGGAAGTCCATCATGTAATGCTTCTAGTGTTGAATTATCAGGTTAAATGGTTGTTTGGAACACATGTAGAAGACGAACACGGCTCTTTTAACCCCACGTGATGTTGCTTTGTACACCTTAATTGAAGCATGTTTTATTAAGAGGTGCATTTTTTAGGATAGAGTTACTATTTGTGTGGACAAGTGGGTTGGAACACAGTTCATCTCATAGCTTAACTTTGAATCCGAACTATGAAAAAGCTTAGGAACATCCTTCTTTTTGAACCGGTGGAAATGTCTTCGCATGGTTTCTCCAGATATCCTACAAATAGAATTTTGTATTCAACGTTCATTGTCCAGTAATTAAGAGTCTATGAGTATCCTGCTTAACTTCTCCTTGAATAAGCCCGCATATAGTGGACACACACCCATACTCATGTTTTCCTAAATTGCCTGCTATTGACTAGTTGCGTCATTTTCTTAAATTTCCATGCTGGATTGATCTTTACATTATCATCTTGCATTATCATTGTTTGAAACATGATGCAATAACGTTTTTACTGAATGACTGTCCAGTGTCAAATCATGGGCTTTATTTGTTAGAGAATAGCTAGATGTGTGGTCTCACATGTTTTCCTATCCTTCTTGATGTGATTCTCAGGAATATCTAAATTATACAGCATATTCAACTCCACACTTTGTTTGTGATGACTGGCTGAACCTATACCTTGACAGCTACCGTATGCACAGGGATCCTGACTCTTACCAAGAGAAAGATGAAATAAGTTGCTCCGACTATCGTTTCGTTTACATGGGAGCAAAAGGTGCCATCATATATAACTCATGCACTTTTTAAAAATTTTTGCCCTCATCAAAACTTATGCGTGGTTCTTGGTTAGGTTCTTGGACTCCACTTCATGCTGACGTTTTCAGGTCATACAGCTGGTCAGCAAATGTTTGTGGAAAGAAACAGTGGTTTCTTTTGCCTCCTTCTCAGTCTCATCTTGTATTCGACAGGCATGAACATAGTTTTGTTATTTTGCACTTTCTTGTTAACTGATGGTTCAATGTGTTGGATTTTAAACTTGTTGTAATTTTGTAAGTAACCTCCAATTTATATTCTGAAGGGACTTGGTGGGCTTGAATAACTACCTATTTCCATTACATTAGTACTTGAGATTGAGAAGAGAAAAGTGACGGAAAATATGCTAAAACTCTAAGCTGAAAAGAACCTATGAGTTGTCTTTTAGTTTTTCAAGAGAATTTCTTCAATATGTAAATGTGGGAATGATACGATCTTTATCACATCCTACATTTAGAGCCATTCGATATCTTGTAGCCTGCCTGTCTATTCCAATACAATAATCCCCCCCACCAAATGCAATGCTTATCTTTGGGCTTTTTGTCGCTGTTTCCTCTTTTTCTAACTTCTTGTTTATATTTTCAGGAATATGAAGGCCTGTATTTATAATATCTTTGATGATATAAGTGAATATTTGTTTCCGGGTTTTAAGAAGGTATATATGATTGCATATGCTAAACCTCTTCTCCTTCTATTTCTTGAATATATCAGCTTTTTCCATGTTCATTTGTTTATCATTGTGCAGGCTACCTGGTTGGAATGTATTCAAGAACAGAACGAAATTATATTTGTGCCAAGTGGCTGGTATCATCAAGTTCATAATCTGGTATTATACTTCATTTATTTTTATGTCCTTGTGGTGCAAATTAATTTGTATTGTTCATGGTTTTAGGTCTCGTTATTTTATGATTAGCAATTGTACTTGTTCCACTATGGTAGATTGCTTGAATTATCTTTTACGCTCTCAACCTCTCTCCGATTATTATTTCTCAACGGATGCTTGATTCAGTTTGCTTTTTCTTTTTCTAAAGATTTTTTAACTTTGAGGTTCTTCTATATTTTCCATCATAGTTTTGTCTCAACAACCATTCTATCTTTTGATATGTGAATGCTTTCAGGATGACACCGTATCAATAAACCACAATTGGTTTAACTCCTACAATCTCTGTTGGGTGGTAAGGATTGCTATCATAGGCTTTACAGAATCTTTGTTCGTCACTTGATAAACAATATTTTGATCCTACCGGCCTGTTCTCTGCTCTGAATTTTCATTCTTTTAGTTGGACTTGATGTTGCGGGACTATAATGAAGCCAAGGAGTACATAGAAGACATTAGAGATATATGTGATGATTTTGAAGGTCTCTGTCAGCGCAACCTTGCAGCTAACACAGGTAGCATAAAGTTTTAGATCACTGTGTATAGTAACTTAGTCGATGATTGAATCAACATTCTAACATTCTGACCAGGTATACAAAGTTGCATTGAGTAAACTGCCAAAACAACTAGATCGTGTATCAATAATTCAATTCATATACAATATCTTATTATCTAGTTTAAGTTAGAGCTGGACATATACTTTCAAATCTTTAACCAGCTTATTGAGATCAGAGCATCATTAGGGAGCAAGCTCTTAAGAACTCCCGTTTTCTCATTATTAGAAGTTTTCAGTGGAAAGCCTTCTACGATGCATACGCTGATAGTATTAAGGAAGGAATGTGCATCCACACTTTACCATTGATGTAATTTATACTGTTTTTTGCTCTTCTTTCAGGCATGAACTTCTATGACTTTTTCATCTTCTTAGCACGCTTTTCGCTCGCGAATTCGGTGGTACTTGACACTCTAGCTAGAGATGCTGAAAATATTGCTGGAATTGGGAGCATATCTCCAATAATTCAGCAGTTGGTTCAGAATCTTTCTTCAATACAGAAGATTGCCTTGAAAATGAAATTCCTGGAATGTTTTTCAGGAGACCAAGGATTCATGTTGGATCTAGTAGAAACACACAAAAATCCCAAGTTTTCTAAACTTTGTTATTCATTAATTCGAACTTGTGAGTCCATACACAATCGACAAGTTTTGAGCTTTTGCTCAAAGACAGTCGCAACACAAGATTCTAGGACTTCGATAGTCATTCAAAACTTTTGTGATGCTGTTTCGTCTCCCCAAGATCTTGTCAAATATATCGACACAGTCTTAACTGAACACACAAGCATAGAATCATCGGAATGATTGTTCTCATTTCCTCATACACAAACTGATTCTCAAGCTGGTTTTTAGACAACAGTGTGGTTCATCTTCATCTAGAAGGCATTTGAGAAATGAGAAATCAAAATGAAATGAACTCCACCATTAGTGCTGGTCCTCCTGGCATTAAAGTGACAAATCTTGGGTACAGATTCTCTTTCTCTCTCATGATTGGATCATTGCATTGATTCAAAAAAAAGAAAGAGAAACAAGAGGTTAGTAGTCTGTGGTTCGATTTGAAAGTGACCCCAGTGGTGGATCAGATTGTGGGAGCACCCACCAAAGATCACCATCTTTTATGGGCCTTCGCTTTCTATTTTTTTTTTTTTTTTCCTTTTTCCTGATCTGTCCTCATAAAGTGTTGTTTTCTTTTTATTTTGTTGGTAAAGCAAACTGTATTATTGTATGCCTTTTCAGTTCAGGCCAGTACACTAAGATGAGTGTCTGTGGTTAAAGTTTGTGGCACCAAGCAGTGGCATCCATTTCACTCTTCTCTTCACTTATTTCAACCTTCCTGTTTTCCGTTTCCACTGTTCTTCGTTCCCTCTCATCTCTTGTTTTCATTCCAATAATCTGTTTTGAACAAATCTTTGCAACTGTTTGATTTGTTTGGGGATGTGAGATTTCTGTTAT ATGTCTGTTTCAGAGTTCATTGATCAATGGTGTAAGGAGCCCATACAGGAGCATGGCCTTAGCTCAAACAATGGACTTACTGACAAGTCTGTACTATACTTGAAAGACTGGCATTTTGTGAAGGAATATCTAAATTATACAGCATATTCAACTCCACACTTTGTTTGTGATGACTGGCTGAACCTATACCTTGACAGCTACCGTATGCACAGGGATCCTGACTCTTACCAAGAGAAAGATGAAATAAGTTGCTCCGACTATCGTTTCGTTTACATGGGAGCAAAAGGTTCTTGGACTCCACTTCATGCTGACGTTTTCAGGTCATACAGCTGGTCAGCAAATGTTTGTGGAAAGAAACAGTGGTTTCTTTTGCCTCCTTCTCAGTCTCATCTTGTATTCGACAGGAATATGAAGGCCTGTATTTATAATATCTTTGATGATATAAGTGAATATTTGTTTCCGGGTTTTAAGAAGGCTACCTGGTTGGAATGTATTCAAGAACAGAACGAAATTATATTTGTGCCAAGTGGCTGGTATCATCAAGTTCATAATCTGGATGACACCGTATCAATAAACCACAATTGGTTTAACTCCTACAATCTCTGTTGGGTGTTGGACTTGATGTTGCGGGACTATAATGAAGCCAAGGAGTACATAGAAGACATTAGAGATATATGTGATGATTTTGAAGGTCTCTGTCAGCGCAACCTTGCAGCTAACACAGGCATGAACTTCTATGACTTTTTCATCTTCTTAGCACGCTTTTCGCTCGCGAATTCGGTGGTACTTGACACTCTAGCTAGAGATGCTGAAAATATTGCTGGAATTGGGAGCATATCTCCAATAATTCAGCAGTTGGTTCAGAATCTTTCTTCAATACAGAAGATTGCCTTGAAAATGAAATTCCTGGAATGTTTTTCAGGAGACCAAGGATTCATGTTGGATCTAGTAGAAACACACAAAAATCCCAAGTTTTCTAAACTTTGTTATTCATTAATTCGAACTTGTGAGTCCATACACAATCGACAAGTTTTGAGCTTTTGCTCAAAGACAGTCGCAACACAAGATTCTAGGACTTCGATAGTCATTCAAAACTTTTGTGATGCTGTTTCGTCTCCCCAAGATCTTGTCAAATATATCGACACAGTCTTAACTGAACACACAAGCATAGAATCATCGGAATGA MSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLYLKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKQWFLLPPSQSHLVFDRNMKACIYNIFDDISEYLFPGFKKATWLECIQEQNEIIFVPSGWYHQVHNLDDTVSINHNWFNSYNLCWVLDLMLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNFYDFFIFLARFSLANSVVLDTLARDAENIAGIGSISPIIQQLVQNLSSIQKIALKMKFLECFSGDQGFMLDLVETHKNPKFSKLCYSLIRTCESIHNRQVLSFCSKTVATQDSRTSIVIQNFCDAVSSPQDLVKYIDTVLTEHTSIESSE Homology
BLAST of Cucsat.G11076.T2 vs. ExPASy Swiss-Prot
Match: Q08BY5 (2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Danio rerio OX=7955 GN=jmjd4 PE=2 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.0e-52 Identity = 114/279 (40.86%), Postives = 155/279 (55.56%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. ExPASy Swiss-Prot
Match: Q5ZHV5 (2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Gallus gallus OX=9031 GN=JMJD4 PE=2 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 2.9e-48 Identity = 102/255 (40.00%), Postives = 148/255 (58.04%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. ExPASy Swiss-Prot
Match: Q9H9V9 (2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Homo sapiens OX=9606 GN=JMJD4 PE=1 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 1.1e-47 Identity = 110/284 (38.73%), Postives = 158/284 (55.63%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. ExPASy Swiss-Prot
Match: Q8BFT6 (2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Mus musculus OX=10090 GN=Jmjd4 PE=2 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 7.5e-44 Identity = 98/274 (35.77%), Postives = 149/274 (54.38%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. ExPASy Swiss-Prot
Match: Q9VJ97 (2-oxoglutarate and iron-dependent oxygenase JMJD4 homolog OS=Drosophila melanogaster OX=7227 GN=CG7200 PE=2 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.9e-40 Identity = 96/248 (38.71%), Postives = 126/248 (50.81%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. NCBI nr
Match: XP_011655739.1 (2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X3 [Cucumis sativus]) HSP 1 Score: 824 bits (2128), Expect = 8.95e-302 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. NCBI nr
Match: XP_004138273.2 (2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X2 [Cucumis sativus] >KGN63564.2 hypothetical protein Csa_013850 [Cucumis sativus]) HSP 1 Score: 824 bits (2128), Expect = 2.41e-300 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. NCBI nr
Match: XP_031740132.1 (2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X1 [Cucumis sativus]) HSP 1 Score: 824 bits (2128), Expect = 3.79e-300 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. NCBI nr
Match: XP_008464541.1 (PREDICTED: jmjC domain-containing protein 4 isoform X2 [Cucumis melo]) HSP 1 Score: 775 bits (2000), Expect = 2.92e-282 Identity = 369/394 (93.65%), Postives = 377/394 (95.69%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. NCBI nr
Match: XP_008464540.1 (PREDICTED: jmjC domain-containing protein 4 isoform X1 [Cucumis melo]) HSP 1 Score: 775 bits (2000), Expect = 7.67e-281 Identity = 369/394 (93.65%), Postives = 377/394 (95.69%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. ExPASy TrEMBL
Match: A0A0A0LNV5 (JmjC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G004270 PE=4 SV=1) HSP 1 Score: 824 bits (2128), Expect = 4.22e-301 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. ExPASy TrEMBL
Match: A0A1S3CLQ0 (jmjC domain-containing protein 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502391 PE=4 SV=1) HSP 1 Score: 775 bits (2000), Expect = 1.41e-282 Identity = 369/394 (93.65%), Postives = 377/394 (95.69%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. ExPASy TrEMBL
Match: A0A1S3CLV6 (jmjC domain-containing protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502391 PE=4 SV=1) HSP 1 Score: 775 bits (2000), Expect = 3.71e-281 Identity = 369/394 (93.65%), Postives = 377/394 (95.69%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. ExPASy TrEMBL
Match: A0A6J1E0R3 (jmjC domain-containing protein 4 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111429764 PE=4 SV=1) HSP 1 Score: 700 bits (1807), Expect = 8.52e-252 Identity = 335/396 (84.60%), Postives = 357/396 (90.15%), Query Frame = 0
BLAST of Cucsat.G11076.T2 vs. ExPASy TrEMBL
Match: A0A6J1E455 (jmjC domain-containing protein 4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429764 PE=4 SV=1) HSP 1 Score: 700 bits (1807), Expect = 9.17e-252 Identity = 335/396 (84.60%), Postives = 357/396 (90.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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