Cucsat.G11076.T11 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G11076.T11
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionjmjC domain-containing protein 4 isoform X1
Locationctg1740: 53219 .. 58113 (-)
RNA-Seq ExpressionCucsat.G11076.T11
SyntenyCucsat.G11076.T11
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTGTTAGGATCCGCCATTGAATCTGGGCCTGGCCCAACTTAACCCAGCCCAATTTCATTGCTCGAGAAAAACAGAAGTACGGCTGCTACCGGCGATGTTCCACCTTTAGTCTCCTTGCTTGTCCTCACGGCCACGGCGGTTCTGAAAGACGAAAATTTCAGCAAAGCAAATGATGGGTATCGAAATTTGTGGAAAAATAGACAAAGTAAATGGGAAAGGACTGAGTTATAAGGAATTTGTAGAACGATACATGGAGAAGAACAAACCTGTGGTGTTGACAGGTCTCATGGATGATTGGAAGGCTTGCAGTGATTGGGTCGACGAGAATGGGCAGCCAAATCTAAGTTTCTTTTCCACCCATTTCGGGAAATCCAGGGTACAGGTACTAAAATTTCTGCTTGAATATGATCTTTTTGGTTCTGATTGTCCCAGCTTAATTTTCATATGTATTCTTTTTTGTCTAATCTCACTTCAGCATGATGTATTGTAATTCAAATTCTCAGTGCATCCGGGGATTTTATTCAGTGGAATTAGTGGGTTGGTTTTATTCATGCATTTCAACTTGTAAGGAAGAGTCTTGTTCTTGCATCTCTTATTACTTGTGTGGGGAGTAGTTCTTCAATGAATTGTTCCATTTTATTGTTATTGGTAAACCTGAAATGATGCAAAAAGGATCAGTCTTGTTTGTCTCACTAACCATACATTTTTTCTCCCTTGGTGCATTATGACTACTGCGTTCCAGTCTCCCTCATTTGCAATCTCCGACTCTTACCATAAAAAACAAAGTAAGAGGAAATGGAACAATGATTTCAATGTGATTGAGCTATCACAGTTAGTTGATGTGTCCATGCTTATGTACCACTAATGGGAATACGTTTCCTATAGTGAAACTTGTCTATTCATGTTCAACTACTCTAAAGAAAGAGTTTTAAGTTTGTGTTCCACTTTTTAGGAGGTCAGATAATCATTTGGCACTTTTAGGTTGCAGATTGCAGTACTAAAGAATTTACAGATCAGAAGAGAGTAGAAATGTCTGTTTCAGAGTTCATTGATCAATGGTGTAAGGAGCCCATACAGGAGCATGGCCTTAGCTCAAACAATGGACTTACTGACAAGTCTGTACTATACTTGAAAGACTGGCATTTTGTGAAGGTGTAAGCGTCTACTTCTTTTTTCCCTTCATTTTTTTGTTTGTGTTTGAACTCATGGATATATATGTCTATAAGGAACATCAAATTGTAGACCTAAGGAAGTCCATCATGTAATGCTTCTAGTGTTGAATTATCAGGTTAAATGGTTGTTTGGAACACATGTAGAAGACGAACACGGCTCTTTTAACCCCACGTGATGTTGCTTTGTACACCTTAATTGAAGCATGTTTTATTAAGAGGTGCATTTTTTAGGATAGAGTTACTATTTGTGTGGACAAGTGGGTTGGAACACAGTTCATCTCATAGCTTAACTTTGAATCCGAACTATGAAAAAGCTTAGGAACATCCTTCTTTTTGAACCGGTGGAAATGTCTTCGCATGGTTTCTCCAGATATCCTACAAATAGAATTTTGTATTCAACGTTCATTGTCCAGTAATTAAGAGTCTATGAGTATCCTGCTTAACTTCTCCTTGAATAAGCCCGCATATAGTGGACACACACCCATACTCATGTTTTCCTAAATTGCCTGCTATTGACTAGTTGCGTCATTTTCTTAAATTTCCATGCTGGATTGATCTTTACATTATCATCTTGCATTATCATTGTTTGAAACATGATGCAATAACGTTTTTACTGAATGACTGTCCAGTGTCAAATCATGGGCTTTATTTGTTAGAGAATAGCTAGATGTGTGGTCTCACATGTTTTCCTATCCTTCTTGATGTGATTCTCAGGAATATCTAAATTATACAGCATATTCAACTCCACACTTTGTTTGTGATGACTGGCTGAACCTATACCTTGACAGCTACCGTATGCACAGGGATCCTGACTCTTACCAAGAGAAAGATGAAATAAGTTGCTCCGACTATCGTTTCGTTTACATGGGAGCAAAAGGTGCCATCATATATAACTCATGCACTTTTTAAAAATTTTTGCCCTCATCAAAACTTATGCGTGGTTCTTGGTTAGGTTCTTGGACTCCACTTCATGCTGACGTTTTCAGGTCATACAGCTGGTCAGCAAATGTTTGTGGAAAGAAACAGTGGTTTCTTTTGCCTCCTTCTCAGTCTCATCTTGTATTCGACAGGCATGAACATAGTTTTGTTATTTTGCACTTTCTTGTTAACTGATGGTTCAATGTGTTGGATTTTAAACTTGTTGTAATTTTGTAAGTAACCTCCAATTTATATTCTGAAGGGACTTGGTGGGCTTGAATAACTACCTATTTCCATTACATTAGTACTTGAGATTGAGAAGAGAAAAGTGACGGAAAATATGCTAAAACTCTAAGCTGAAAAGAACCTATGAGTTGTCTTTTAGTTTTTCAAGAGAATTTCTTCAATATGTAAATGTGGGAATGATACGATCTTTATCACATCCTACATTTAGAGCCATTCGATATCTTGTAGCCTGCCTGTCTATTCCAATACAATAATCCCCCCCACCAAATGCAATGCTTATCTTTGGGCTTTTTGTCGCTGTTTCCTCTTTTTCTAACTTCTTGTTTATATTTTCAGGAATATGAAGGCCTGTATTTATAATATCTTTGATGATATAAGTGAATATTTGTTTCCGGGTTTTAAGAAGGTATATATGATTGCATATGCTAAACCTCTTCTCCTTCTATTTCTTGAATATATCAGCTTTTTCCATGTTCATTTGTTTATCATTGTGCAGGCTACCTGGTTGGAATGTATTCAAGAACAGAACGAAATTATATTTGTGCCAAGTGGCTGGTATCATCAAGTTCATAATCTGGTATTATACTTCATTTATTTTTATGTCCTTGTGGTGCAAATTAATTTGTATTGTTCATGGTTTTAGGTCTCGTTATTTTATGATTAGCAATTGTACTTGTTCCACTATGGTAGATTGCTTGAATTATCTTTTACGCTCTCAACCTCTCTCCGATTATTATTTCTCAACGGATGCTTGATTCAGTTTGCTTTTTCTTTTTCTAAAGATTTTTTAACTTTGAGGTTCTTCTATATTTTCCATCATAGTTTTGTCTCAACAACCATTCTATCTTTTGATATGTGAATGCTTTCAGGATGACACCGTATCAATAAACCACAATTGGTTTAACTCCTACAATCTCTGTTGGGTGGTAAGGATTGCTATCATAGGCTTTACAGAATCTTTGTTCGTCACTTGATAAACAATATTTTGATCCTACCGGCCTGTTCTCTGCTCTGAATTTTCATTCTTTTAGTTGGACTTGATGTTGCGGGACTATAATGAAGCCAAGGAGTACATAGAAGACATTAGAGATATATGTGATGATTTTGAAGGTCTCTGTCAGCGCAACCTTGCAGCTAACACAGGTAGCATAAAGTTTTAGATCACTGTGTATAGTAACTTAGTCGATGATTGAATCAACATTCTAACATTCTGACCAGGTATACAAAGTTGCATTGAGTAAACTGCCAAAACAACTAGATCGTGTATCAATAATTCAATTCATATACAATATCTTATTATCTAGTTTAAGTTAGAGCTGGACATATACTTTCAAATCTTTAACCAGCTTATTGAGATCAGAGCATCATTAGGGAGCAAGCTCTTAAGAACTCCCGTTTTCTCATTATTAGAAGTTTTCAGTGGAAAGCCTTCTACGATGCATACGCTGATAGTATTAAGGAAGGAATGTGCATCCACACTTTACCATTGATGTAATTTATACTGTTTTTTGCTCTTCTTTCAGGCATGAACTTCTATGACTTTTTCATCTTCTTAGCACGCTTTTCGCTCGCGAATTCGGTGGTACTTGACACTCTAGCTAGAGATGCTGAAAATATTGCTGGAATTGGGAGCATATCTCCAATAATTCAGCAGTTGGTTCAGAATCTTTCTTCAATACAGAAGATTGCCTTGAAAATGAAATTCCTGGAATGTTTTTCAGGAGACCAAGGATTCATGTTGGATCTAGTAGAAACACACAAAAATCCCAAGTTTTCTAAACTTTGTTATTCATTAATTCGAACTTGTGAGTCCATACACAATCGACAAGTTTTGAGCTTTTGCTCAAAGACAGTCGCAACACAAGATTCTAGGACTTCGATAGTCATTCAAAACTTTTGTGATGCTGTTTCGTCTCCCCAAGATCTTGTCAAATATATCGACACAGTCTTAACTGAACACACAAGCATAGAATCATCGGAATGATTGTTCTCATTTCCTCATACACAAACTGATTCTCAAGCTGGTTTTTAGACAACAGTGTGGTTCATCTTCATCTAGAAGGCATTTGAGAAATGAGAAATCAAAATGAAATGAACTCCACCATTAGTGCTGGTCCTCCTGGCATTAAAGTGACAAATCTTGGGTACAGATTCTCTTTCTCTCTCATGATTGGATCATTGCATTGATTCAAAAAAAAGAAAGAGAAACAAGAGGTTAGTAGTCTGTGGTTCGATTTGAAAGTGACCCCAGTGGTGGATCAGATTGTGGGAGCACCCACCAAAGATCACCATCTTTTATGGGCCTTCGCTTTCTATTTTTTTTTTTTTTTTCCTTTTTCCTGATCTGTCCTCATAAAGTGTTGTTTTCTTTTTATTTTGTTGGTAAAGCAAACTGTATTATTGTATGCCTTTTCAGTTCAGGCCAGTACACTAAGATGAGTGTCTGTGGTTAAAGTTTGTGGCACCAAGCAGTGGCATCCATTTCACTCTTCTCTTCACTTATTTCAACCTTCCTGTTTTCCGTTTCCACTGTTCTTCGTTCCCTCTCATCTCTTGT

Coding sequence (CDS)

ATGATGGGTATCGAAATTTGTGGAAAAATAGACAAAGTAAATGGGAAAGGACTGAGTTATAAGGAATTTGTAGAACGATACATGGAGAAGAACAAACCTGTGGTGTTGACAGGTCTCATGGATGATTGGAAGGCTTGCAGTGATTGGGTCGACGAGAATGGGCAGCCAAATCTAAGTTTCTTTTCCACCCATTTCGGGAAATCCAGGGTACAGGTTGCAGATTGCAGTACTAAAGAATTTACAGATCAGAAGAGAGTAGAAATGTCTGTTTCAGAGTTCATTGATCAATGGTGTAAGGAGCCCATACAGGAGCATGGCCTTAGCTCAAACAATGGACTTACTGACAAGTCTGTACTATACTTGAAAGACTGGCATTTTGTGAAGGAATATCTAAATTATACAGCATATTCAACTCCACACTTTGTTTGTGATGACTGGCTGAACCTATACCTTGACAGCTACCGTATGCACAGGGATCCTGACTCTTACCAAGAGAAAGATGAAATAAGTTGCTCCGACTATCGTTTCGTTTACATGGGAGCAAAAGGTGCCATCATATATAACTCATGCACTTTTTAA

Protein sequence

MMGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSFFSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLYLKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMGAKGAIIYNSCTF
Homology
[Close]
BLAST of Cucsat.G11076.T11 vs. ExPASy Swiss-Prot
Match: Q08BY5 (2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Danio rerio OX=7955 GN=jmjd4 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-21
Identity = 57/168 (33.93%), Postives = 80/168 (47.62%), Query Frame = 0 

Query: 18  LSYKEFVERYMEKNKPVVLT-GLMDDWKACSDWVDENGQPNLSFFSTHFGKSRVQVADCS 77
           + Y +F + Y+  N+P + +    ++W     WV   G+PNL      F ++ V VA+CS
Sbjct: 36  IPYSKFFKNYLIPNQPCMFSKKFTEEWNCRKKWVTAEGKPNLQRLLHEFDETPVPVANCS 95

Query: 78  TKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLYLKDWHFVKEYLNYTAY 137
            KE+    +  M   EFI  W +E IQ      N   + K  LYLKDWH  + +  +  Y
Sbjct: 96  VKEYNANPKQIMPFKEFIQYW-RESIQ------NGHSSPKGCLYLKDWHMQRNFPEHNIY 155

Query: 138 STPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMGAKGA 185
            TP +   DWLN Y D+               I   DYRFVYMG KG+
Sbjct: 156 KTPIYFSSDWLNEYWDT---------------IEVDDYRFVYMGPKGS 181

[Close]
BLAST of Cucsat.G11076.T11 vs. ExPASy Swiss-Prot
Match: Q5ZHV5 (2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Gallus gallus OX=9031 GN=JMJD4 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.3e-21
Identity = 59/176 (33.52%), Postives = 88/176 (50.00%), Query Frame = 0 

Query: 10  IDKVNGKGLSYKEFVERYMEKNKPVVLT-GLMDDWKACSDWVDENGQPNLSFFSTHFGKS 69
           IDK+  +  +Y +F   Y+  N+P V +    D W +  +WV   G+P+       FG++
Sbjct: 32  IDKI--ESFTYSDFFRDYLIPNQPCVFSEKFTDGWGSRRNWVTWGGKPDFDHLLQEFGEA 91

Query: 70  RVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLYLKDWHFVK 129
            V VA+C  KE+    + ++   E+I  W KE I ++G  S+ G      LYLKDWH  +
Sbjct: 92  IVPVANCDVKEYNSNPKEQLPFKEYISYW-KEYI-KNGYRSSRG-----CLYLKDWHLSR 151

Query: 130 EYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMGAKGA 185
            +     Y+TP +   DWLN Y D+               I+  DYRFVYMG KG+
Sbjct: 152 AFPEQDVYTTPVYFSSDWLNEYWDA---------------IAVDDYRFVYMGPKGS 183

[Close]
BLAST of Cucsat.G11076.T11 vs. ExPASy Swiss-Prot
Match: Q9VJ97 (2-oxoglutarate and iron-dependent oxygenase JMJD4 homolog OS=Drosophila melanogaster OX=7227 GN=CG7200 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.6e-18
Identity = 57/190 (30.00%), Postives = 83/190 (43.68%), Query Frame = 0 

Query: 17  GLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWV---------DENGQP-----NLSFFS 76
           GL Y +F  RYM KN PV++  + +DW+ C +W          D N  P     N  +  
Sbjct: 35  GLDYNDFFWRYMHKNIPVIIANVSNDWE-CQNWTVGQSSPESRDLNSNPSASSINFDYLK 94

Query: 77  THFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHG--------LSSNNGLT 136
           T      V VA+C++  F    ++E++  +++ +W +  I+           ++SN    
Sbjct: 95  TKISDGPVPVANCNSSYFNSHTKLELNFHDYLAKW-RSSIESQSSAAWTSAEVNSNVAPA 154

Query: 137 DKSVLYLKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDY 185
               LYLKDWH   +   Y  Y  P +   DWLN  L            Q KD     DY
Sbjct: 155 SGDNLYLKDWHLAAQMPGYNFYKVPKYFASDWLNEQL----------IQQGKD-----DY 207

[Close]
BLAST of Cucsat.G11076.T11 vs. ExPASy Swiss-Prot
Match: Q54CS7 (JmjC domain-containing protein E OS=Dictyostelium discoideum OX=44689 GN=jcdE PE=4 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 6.3e-04
Identity = 15/31 (48.39%), Postives = 24/31 (77.42%), Query Frame = 0 

Query: 22 EFVERYMEKNKPVVLTGLMDDWKACSDWVDE 53
          EF   Y+ +NKPV++TGL+++WKA  +W D+
Sbjct: 40 EFYREYVSQNKPVIITGLLENWKAYKEWSDD 70

[Close]
BLAST of Cucsat.G11076.T11 vs. NCBI nr
Match: XP_004138273.2 (2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X2 [Cucumis sativus] >KGN63564.2 hypothetical protein Csa_013850 [Cucumis sativus])

HSP 1 Score: 393 bits (1009), Expect = 1.14e-133
Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MMGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60
           MMGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF
Sbjct: 1   MMGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60

Query: 61  FSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLY 120
           FSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLY
Sbjct: 61  FSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLY 120

Query: 121 LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMG 180
           LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMG
Sbjct: 121 LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMG 180

Query: 181 AKGA 184
           AKG+
Sbjct: 181 AKGS 184

[Close]
BLAST of Cucsat.G11076.T11 vs. NCBI nr
Match: KAA0057839.1 (jmjC domain-containing protein 4 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 379 bits (972), Expect = 1.84e-128
Identity = 175/184 (95.11%), Postives = 180/184 (97.83%), Query Frame = 0 

Query: 1   MMGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60
           MMGIEICG+IDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF
Sbjct: 1   MMGIEICGEIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60

Query: 61  FSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLY 120
           FSTHFGKSRVQVADC T+EFTDQKRVEMSVSEFIDQWCKEPI E+GL SNNGLTD+SVLY
Sbjct: 61  FSTHFGKSRVQVADCGTREFTDQKRVEMSVSEFIDQWCKEPIPENGLGSNNGLTDESVLY 120

Query: 121 LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMG 180
           LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQE DEISCSDYRFVYMG
Sbjct: 121 LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQENDEISCSDYRFVYMG 180

Query: 181 AKGA 184
           AKG+
Sbjct: 181 AKGS 184

[Close]
BLAST of Cucsat.G11076.T11 vs. NCBI nr
Match: XP_008464540.1 (PREDICTED: jmjC domain-containing protein 4 isoform X1 [Cucumis melo])

HSP 1 Score: 379 bits (972), Expect = 4.64e-128
Identity = 175/184 (95.11%), Postives = 180/184 (97.83%), Query Frame = 0 

Query: 1   MMGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60
           MMGIEICG+IDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF
Sbjct: 1   MMGIEICGEIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60

Query: 61  FSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLY 120
           FSTHFGKSRVQVADC T+EFTDQKRVEMSVSEFIDQWCKEPI E+GL SNNGLTD+SVLY
Sbjct: 61  FSTHFGKSRVQVADCGTREFTDQKRVEMSVSEFIDQWCKEPIPENGLGSNNGLTDESVLY 120

Query: 121 LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMG 180
           LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQE DEISCSDYRFVYMG
Sbjct: 121 LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQENDEISCSDYRFVYMG 180

Query: 181 AKGA 184
           AKG+
Sbjct: 181 AKGS 184

[Close]
BLAST of Cucsat.G11076.T11 vs. NCBI nr
Match: XP_031740132.1 (2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X1 [Cucumis sativus])

HSP 1 Score: 378 bits (971), Expect = 9.61e-128
Identity = 181/196 (92.35%), Postives = 184/196 (93.88%), Query Frame = 0 

Query: 1   MMGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60
           MMGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF
Sbjct: 1   MMGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60

Query: 61  FSTHFGKSRVQ-----VAD-------CSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLS 120
           FSTHFGKSRVQ     ++D       CSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLS
Sbjct: 61  FSTHFGKSRVQSPSFAISDSYHKKQNCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLS 120

Query: 121 SNNGLTDKSVLYLKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDE 180
           SNNGLTDKSVLYLKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDE
Sbjct: 121 SNNGLTDKSVLYLKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDE 180

Query: 181 ISCSDYRFVYMGAKGA 184
           ISCSDYRFVYMGAKG+
Sbjct: 181 ISCSDYRFVYMGAKGS 196

[Close]
BLAST of Cucsat.G11076.T11 vs. NCBI nr
Match: XP_038879491.1 (2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X2 [Benincasa hispida])

HSP 1 Score: 370 bits (949), Expect = 1.29e-124
Identity = 171/183 (93.44%), Postives = 179/183 (97.81%), Query Frame = 0 

Query: 2   MGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSFF 61
           MGIEICG+IDKVNGKGLSYKEFVERYMEKN+PVVLTGLMDDWKACSDWVDEN QPNL FF
Sbjct: 1   MGIEICGRIDKVNGKGLSYKEFVERYMEKNQPVVLTGLMDDWKACSDWVDENRQPNLGFF 60

Query: 62  STHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLYL 121
           STHFGKSRVQVADCST+EFTDQKRVEMSVSEFIDQWCKEPIQEHGL+S++GLT+KSVLYL
Sbjct: 61  STHFGKSRVQVADCSTREFTDQKRVEMSVSEFIDQWCKEPIQEHGLASDHGLTNKSVLYL 120

Query: 122 KDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMGA 181
           KDWHFVKEY NYTAYSTPHFVCDDWLNLYLDSYRMHRD DSYQEKDEISCSDYRFVYMGA
Sbjct: 121 KDWHFVKEYPNYTAYSTPHFVCDDWLNLYLDSYRMHRDSDSYQEKDEISCSDYRFVYMGA 180

Query: 182 KGA 184
           KG+
Sbjct: 181 KGS 183

[Close]
BLAST of Cucsat.G11076.T11 vs. ExPASy TrEMBL
Match: A0A5A7UW88 (JmjC domain-containing protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001260 PE=4 SV=1)

HSP 1 Score: 379 bits (972), Expect = 8.89e-129
Identity = 175/184 (95.11%), Postives = 180/184 (97.83%), Query Frame = 0 

Query: 1   MMGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60
           MMGIEICG+IDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF
Sbjct: 1   MMGIEICGEIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60

Query: 61  FSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLY 120
           FSTHFGKSRVQVADC T+EFTDQKRVEMSVSEFIDQWCKEPI E+GL SNNGLTD+SVLY
Sbjct: 61  FSTHFGKSRVQVADCGTREFTDQKRVEMSVSEFIDQWCKEPIPENGLGSNNGLTDESVLY 120

Query: 121 LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMG 180
           LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQE DEISCSDYRFVYMG
Sbjct: 121 LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQENDEISCSDYRFVYMG 180

Query: 181 AKGA 184
           AKG+
Sbjct: 181 AKGS 184

[Close]
BLAST of Cucsat.G11076.T11 vs. ExPASy TrEMBL
Match: A0A1S3CLV6 (jmjC domain-containing protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502391 PE=4 SV=1)

HSP 1 Score: 379 bits (972), Expect = 2.25e-128
Identity = 175/184 (95.11%), Postives = 180/184 (97.83%), Query Frame = 0 

Query: 1   MMGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60
           MMGIEICG+IDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF
Sbjct: 1   MMGIEICGEIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSF 60

Query: 61  FSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLY 120
           FSTHFGKSRVQVADC T+EFTDQKRVEMSVSEFIDQWCKEPI E+GL SNNGLTD+SVLY
Sbjct: 61  FSTHFGKSRVQVADCGTREFTDQKRVEMSVSEFIDQWCKEPIPENGLGSNNGLTDESVLY 120

Query: 121 LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMG 180
           LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQE DEISCSDYRFVYMG
Sbjct: 121 LKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQENDEISCSDYRFVYMG 180

Query: 181 AKGA 184
           AKG+
Sbjct: 181 AKGS 184

[Close]
BLAST of Cucsat.G11076.T11 vs. ExPASy TrEMBL
Match: A0A6J1C073 (jmjC domain-containing protein 4 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111007274 PE=4 SV=1)

HSP 1 Score: 358 bits (918), Expect = 3.29e-120
Identity = 165/183 (90.16%), Postives = 175/183 (95.63%), Query Frame = 0 

Query: 2   MGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSFF 61
           MGIEICG IDKVNGK LSYKEFVERYMEKN+PVVLTGLMDDWK+CSDWVDENGQPNL FF
Sbjct: 1   MGIEICGTIDKVNGKQLSYKEFVERYMEKNRPVVLTGLMDDWKSCSDWVDENGQPNLQFF 60

Query: 62  STHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLYL 121
           STHFGKSRVQVADCST+EFTDQKRVEMSVSEFIDQW KE +QEHG +SN+GLT+K+VLYL
Sbjct: 61  STHFGKSRVQVADCSTREFTDQKRVEMSVSEFIDQWYKESVQEHGFASNDGLTEKAVLYL 120

Query: 122 KDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMGA 181
           KDWHFVKEY NYTAYSTP FVCDDWLNLYLDSYRMHRDPDS+QEKDEISCSDYRFVYMGA
Sbjct: 121 KDWHFVKEYPNYTAYSTPQFVCDDWLNLYLDSYRMHRDPDSHQEKDEISCSDYRFVYMGA 180

Query: 182 KGA 184
           KG+
Sbjct: 181 KGS 183

[Close]
BLAST of Cucsat.G11076.T11 vs. ExPASy TrEMBL
Match: A0A6J1C0P7 (jmjC domain-containing protein 4 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007274 PE=4 SV=1)

HSP 1 Score: 358 bits (918), Expect = 4.49e-120
Identity = 165/183 (90.16%), Postives = 175/183 (95.63%), Query Frame = 0 

Query: 2   MGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSFF 61
           MGIEICG IDKVNGK LSYKEFVERYMEKN+PVVLTGLMDDWK+CSDWVDENGQPNL FF
Sbjct: 1   MGIEICGTIDKVNGKQLSYKEFVERYMEKNRPVVLTGLMDDWKSCSDWVDENGQPNLQFF 60

Query: 62  STHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLYL 121
           STHFGKSRVQVADCST+EFTDQKRVEMSVSEFIDQW KE +QEHG +SN+GLT+K+VLYL
Sbjct: 61  STHFGKSRVQVADCSTREFTDQKRVEMSVSEFIDQWYKESVQEHGFASNDGLTEKAVLYL 120

Query: 122 KDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMGA 181
           KDWHFVKEY NYTAYSTP FVCDDWLNLYLDSYRMHRDPDS+QEKDEISCSDYRFVYMGA
Sbjct: 121 KDWHFVKEYPNYTAYSTPQFVCDDWLNLYLDSYRMHRDPDSHQEKDEISCSDYRFVYMGA 180

Query: 182 KGA 184
           KG+
Sbjct: 181 KGS 183

[Close]
BLAST of Cucsat.G11076.T11 vs. ExPASy TrEMBL
Match: A0A6J1C0Y3 (jmjC domain-containing protein 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007274 PE=4 SV=1)

HSP 1 Score: 358 bits (918), Expect = 8.04e-120
Identity = 165/183 (90.16%), Postives = 175/183 (95.63%), Query Frame = 0 

Query: 2   MGIEICGKIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSFF 61
           MGIEICG IDKVNGK LSYKEFVERYMEKN+PVVLTGLMDDWK+CSDWVDENGQPNL FF
Sbjct: 1   MGIEICGTIDKVNGKQLSYKEFVERYMEKNRPVVLTGLMDDWKSCSDWVDENGQPNLQFF 60

Query: 62  STHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLYL 121
           STHFGKSRVQVADCST+EFTDQKRVEMSVSEFIDQW KE +QEHG +SN+GLT+K+VLYL
Sbjct: 61  STHFGKSRVQVADCSTREFTDQKRVEMSVSEFIDQWYKESVQEHGFASNDGLTEKAVLYL 120

Query: 122 KDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDSYQEKDEISCSDYRFVYMGA 181
           KDWHFVKEY NYTAYSTP FVCDDWLNLYLDSYRMHRDPDS+QEKDEISCSDYRFVYMGA
Sbjct: 121 KDWHFVKEYPNYTAYSTPQFVCDDWLNLYLDSYRMHRDPDSHQEKDEISCSDYRFVYMGA 180

Query: 182 KGA 184
           KG+
Sbjct: 181 KGS 183

The following BLAST results are available for this feature:
BLAST of Cucsat.G11076.T11 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q08BY51.9e-2133.932-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Danio rerio OX=7955 GN=jmjd... [more]
Q5ZHV54.3e-2133.522-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Gallus gallus OX=9031 GN=JM... [more]
Q9VJ972.6e-1830.002-oxoglutarate and iron-dependent oxygenase JMJD4 homolog OS=Drosophila melanoga... [more]
Q54CS76.3e-0448.39JmjC domain-containing protein E OS=Dictyostelium discoideum OX=44689 GN=jcdE PE... [more]
BLAST of Cucsat.G11076.T11 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138273.21.14e-13399.462-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X2 [Cucumis sativus] >... [more]
KAA0057839.11.84e-12895.11jmjC domain-containing protein 4 isoform X1 [Cucumis melo var. makuwa][more]
XP_008464540.14.64e-12895.11PREDICTED: jmjC domain-containing protein 4 isoform X1 [Cucumis melo][more]
XP_031740132.19.61e-12892.352-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X1 [Cucumis sativus][more]
XP_038879491.11.29e-12493.442-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X2 [Benincasa hispida][more]
BLAST of Cucsat.G11076.T11 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UW888.89e-12995.11JmjC domain-containing protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CLV62.25e-12895.11jmjC domain-containing protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502... [more]
A0A6J1C0733.29e-12090.16jmjC domain-containing protein 4 isoform X3 OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1C0P74.49e-12090.16jmjC domain-containing protein 4 isoform X2 OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1C0Y38.04e-12090.16jmjC domain-containing protein 4 isoform X1 OS=Momordica charantia OX=3673 GN=LO... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041667Cupin-like domain 8PFAMPF13621Cupin_8coord: 22..100
e-value: 8.2E-8
score: 32.4
NoneNo IPR availableGENE3D2.60.120.650Cupincoord: 3..187
e-value: 8.3E-34
score: 119.2
NoneNo IPR availablePANTHERPTHR12480:SF62-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4coord: 8..185
NoneNo IPR availablePANTHERPTHR12480ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJDcoord: 8..185
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 11..185

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G11076Cucsat.G11076gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G11076.T11.E1Cucsat.G11076.T11.E1exon
Cucsat.G11076.T11.E2Cucsat.G11076.T11.E2exon
Cucsat.G11076.T11.E3Cucsat.G11076.T11.E3exon
Cucsat.G11076.T11.E4Cucsat.G11076.T11.E4exon
Cucsat.G11076.T11.E5Cucsat.G11076.T11.E5exon
Cucsat.G11076.T11.E6Cucsat.G11076.T11.E6exon
Cucsat.G11076.T11.E7Cucsat.G11076.T11.E7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G11076.T11.C3Cucsat.G11076.T11.C3CDS
Cucsat.G11076.T11.C2Cucsat.G11076.T11.C2CDS
Cucsat.G11076.T11.C1Cucsat.G11076.T11.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G11076.T11Cucsat.G11076.T11-proteinpolypeptide