Cucsat.G11049.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GAGCTGAATCACACACCGCGCTCGCTTTCTGCTCTAGCAATGGCAGCTCTAGCTCGTTTCTCCCGCAAGGCTATTGCCTCAGCGGTTGCCACCAATCAACTCCGCCGTGCTTTCTCGACCCAAGTGTCCAAAACGATCACGCCCTCACCGGATCGAGTCAAGTGGGACTATAGAGGTCAAAGACAGATAATCCCGCTCGGTCAGTGGCTCCCCACAATCGCCGTCGACGCCTATGTTGCACCTAATGTGGTTCTTGCCGGACAGGTTAAAGTCTGCGACGGGGCCTCTGTTTGGGCGGGTTCCGTTCTCCGCGGCGATCTCAACAAGATTACAATCGGGTTTTGCTCTAATGTGCAGGAACGGTGCGTCCTTCATGCTGCTTGGTCTTCCCCAACAGGTTCAATTCAACTTACTTGTTTTTACGTGTTTTCTTTCGTCATTTTCTGTTTTTGGGTTTTATCGAATTTCGTTGTTTGGTGCTTGTTTTCCTCGGTAATGTGAAAACGTGGCCGAGAAATGCTGCACTCTTAAATTTCAATCTCTGTTTGTTTAACTAGGATCTCCAGAGGATAGTGGTTAATCTTCAAAGTTTTTCTGGATTCTTGAAACCATGGATCTGTTGAGTAGCTGACGCCATATTTGTTTCCCGTTCATTTAAAAAAAACGAATGTAAGTATCTAGATTGTGGTTTTCTGGGGACTTGGTAGGTTCAAGTAATTGGAGCTAGTTTCCGTGAGAAATATGGGCATAAAATTATAAATAGAAGTACTAAGCTGCAGACCTAGAATTCTCACTATTTGGAATCTTGACATCCTTCAGAACCAGTTCTAACCATTGAGAAGGATGTGGTAATAGGGGGTATGGATGTGATCATTTTGCTTCTCAAATTATCTCTAGGAATCCAAGCATTGTTATGCACTTTTCATATACGATGAACGTGAAGCATAACAAAGTCAGTATAGTTCTTATAGGAATAGTAAGTTTTAACCAGAACTTAGAAGTTAAGCGATCTTGTTCTTATATTTCTATCATGCAACCATCCATCTGCTACGATTATGGCCTTGGTCCACTTGTTTATTAGACTCTTTGTGTTCAACCACAATAATCCCATTTCATGATAATTTGATCTCACTCTAGACTGGTTCTTCTCATTTGGTTCAGTAACCTTAGTTCAACATATTACATTGTTTTCATCAACCTGTGTATTGCCGTTAGTTCTCTAGAAAACAACACCCCCAATTTATGATAAGATGATTTTGTTCCAATATCATCTATTCAAACTGCTTCCTTTGTAGAAGCAAAGTTCTCGCTCCTTTTTGTTTTTTTTTTCTTCCTTTTTATCCCCTCTTTTCTTTTCTTTTTTCTTTAAGTGAGCATAATTTAACGTTGTTTCCTTTCTTTTCCATTCTGGTAACCTCTTCTGGATTAGGATTTTGGAGTAAAGGGTTTCTCCATTGAATTCCTTTTTTCTCAATCTCTAGCCTGAATAATTAACATTTCTACCGCAAAATTACACTATCAACGTATTGTGTTGTACACTATTTCTTTGATTTTTCACTTCCCTTTTTTATCCTTCTTATTTGTTATATGTATGATCAAAAGTCGGAGAAGGAGGCTAGTTTTACATCAGGGATTTGCCAAATTTTCTTATTTTCTTGTCAGTTCCTTTCTAGGATCTTCATTTATATCTATGCATATGCATGATACTGTAAGGAGTTATATCATCATTTAGCAATTAGTTGATAGTGGTTGGAGATGGGGTAGATAGGGAAGGACAGAGAAGGAGTAAGAGATAAAGAGAGAGACAGAACAAGGTGGAGAGAGAGGGAATGGGAGAAGGAACAGGAGAGTTGGGTAATAGTGAGAAAGAGTGATGGATAGAGAGAGTAACAGAGAGAAGTACAATGGCGGCAGAACAGGAGAGTTGGGTAATGGAGAGGAAGAGTGATGGATGGAGATAATTAAAGAGGGAAGTACAATGGAGCAGAGAAGGCTATGGATAGAGAGATGTAAAACGGTAGATATAGAGCTGACCAATAGGATGGGCAATTGCACGAGCTGTAAAGTTACTTCTCCCGTACTCTTGCAGGTTAAGGGGGGTTTGGCCTACAATTTTTGGGGGTTTAAATTTGCTTAGGATTTGACATTGCCTTTTTCAGGACGGGGTGAATTGCACAAGTCTTCAAATATTTGCCTCTCTGTCTTGTTTTTAAGTCATTTTCTTGGTTTCAGTACGTCTGGATGTAAAAGCTGAAGTTCCAGTCTTGACTTATGACAACTGCTTAATAATCAGACCTAAATTTACTATGTTGGTGTCCATTATTCGTGTGATCAGTCCAAAATATGAAACTTCTGTTTAAAATGTATATTTTTTAATCTCTGTTTCTTTTTTTAAAAAATTAGTACATAATCTGAAGGAAATAGTTGAGAATTTGAGAATGTTCTAAATGAGAAAAATGAGAGGCTCAAGGCATCTAAATTGACCAAGTTTGATGGTCTACTCTTAGTTCATAATCGATAACCCCTCAGTTGTCAGTTTAGAGAAAATGTTGTCATCTATCTTACTGGAGATGAAAGGCCATTGGATATAAATGAACTTCAATTTGTAAGGCCTCCTAATCCTCCTTTTGTCTTCTTTATTTTCCTCATTCCTCATTGTATAATTCTCTTGTACTTTGAATTCTATTTAATAAAGAAGCTTGTCTCCTTTTCAAAAAAAGTATCTAAAATCTGCAATGCAGCTTAATTCCTCTTTTCAGTTTGTGACACATGTTTTCTAGTCCATGCTATATCTAAATTTTCCCTTATATGTCCATCCAGGACTGCCGGCAGAGACATCTGTAGAGAGATTCGT GAGCTGAATCACACACCGCGCTCGCTTTCTGCTCTAGCAATGGCAGCTCTAGCTCGTTTCTCCCGCAAGGCTATTGCCTCAGCGGTTGCCACCAATCAACTCCGCCGTGCTTTCTCGACCCAAGTGTCCAAAACGATCACGCCCTCACCGGATCGAGTCAAGTGGGACTATAGAGGTCAAAGACAGATAATCCCGCTCGGTCAGTGGCTCCCCACAATCGCCGTCGACGCCTATGTTGCACCTAATGTGGTTCTTGCCGGACAGGTTAAAGTCTGCGACGGGGCCTCTGTTTGGGCGGGTTCCGTTCTCCGCGGCGATCTCAACAAGATTACAATCGGGTTTTGCTCTAATGTGCAGGAACGGTGCGTCCTTCATGCTGCTTGGTCTTCCCCAACAGGATCTCCAGAGGATAGTGGTTAA ELNHTPRSLSALAMAALARFSRKAIASAVATNQLRRAFSTQVSKTITPSPDRVKWDYRGQRQIIPLGQWLPTIAVDAYVAPNVVLAGQVKVCDGASVWAGSVLRGDLNKITIGFCSNVQERCVLHAAWSSPTGSPEDSG Homology
BLAST of Cucsat.G11049.T2 vs. ExPASy Swiss-Prot
Match: Q9SMN1 (Gamma carbonic anhydrase-like 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACAL2 PE=1 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 9.7e-47 Identity = 91/131 (69.47%), Postives = 106/131 (80.92%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. ExPASy Swiss-Prot
Match: Q9FMV1 (Gamma carbonic anhydrase-like 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACAL1 PE=1 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 1.7e-43 Identity = 89/131 (67.94%), Postives = 104/131 (79.39%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. ExPASy Swiss-Prot
Match: Q94AU7 (Gamma carbonic anhydrase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA3 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08 Identity = 27/63 (42.86%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. ExPASy Swiss-Prot
Match: Q9C6B3 (Gamma carbonic anhydrase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA2 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.0e-08 Identity = 24/63 (38.10%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. ExPASy Swiss-Prot
Match: Q9FWR5 (Gamma carbonic anhydrase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA1 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 6.8e-08 Identity = 24/63 (38.10%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. NCBI nr
Match: XP_011651037.1 (gamma carbonic anhydrase-like 2, mitochondrial [Cucumis sativus] >KGN63474.1 hypothetical protein Csa_013834 [Cucumis sativus]) HSP 1 Score: 243 bits (621), Expect = 4.89e-79 Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. NCBI nr
Match: XP_008464419.1 (PREDICTED: gamma carbonic anhydrase-like 2, mitochondrial [Cucumis melo] >KAA0057763.1 gamma carbonic anhydrase-like 2 [Cucumis melo var. makuwa] >TYJ98444.1 gamma carbonic anhydrase-like 2 [Cucumis melo var. makuwa]) HSP 1 Score: 240 bits (612), Expect = 1.14e-77 Identity = 119/125 (95.20%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. NCBI nr
Match: XP_023531879.1 (gamma carbonic anhydrase-like 2, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 233 bits (594), Expect = 6.21e-75 Identity = 114/125 (91.20%), Postives = 120/125 (96.00%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. NCBI nr
Match: KAG7021390.1 (Gamma carbonic anhydrase-like 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 232 bits (592), Expect = 1.25e-74 Identity = 114/125 (91.20%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. NCBI nr
Match: KAG6587404.1 (Gamma carbonic anhydrase-like 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 232 bits (591), Expect = 1.77e-74 Identity = 113/125 (90.40%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. ExPASy TrEMBL
Match: A0A0A0LR76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001460 PE=4 SV=1) HSP 1 Score: 243 bits (621), Expect = 2.37e-79 Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. ExPASy TrEMBL
Match: A0A5D3BH64 (Gamma carbonic anhydrase-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00450 PE=4 SV=1) HSP 1 Score: 240 bits (612), Expect = 5.52e-78 Identity = 119/125 (95.20%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. ExPASy TrEMBL
Match: A0A1S3CLK0 (gamma carbonic anhydrase-like 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502311 PE=4 SV=1) HSP 1 Score: 240 bits (612), Expect = 5.52e-78 Identity = 119/125 (95.20%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. ExPASy TrEMBL
Match: A0A6J1EZA5 (gamma carbonic anhydrase-like 2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111440330 PE=4 SV=1) HSP 1 Score: 232 bits (591), Expect = 8.58e-75 Identity = 114/125 (91.20%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of Cucsat.G11049.T2 vs. ExPASy TrEMBL
Match: A0A6J1JI10 (gamma carbonic anhydrase-like 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484776 PE=4 SV=1) HSP 1 Score: 231 bits (590), Expect = 1.22e-74 Identity = 113/125 (90.40%), Postives = 119/125 (95.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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