Cucsat.G10863.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G10863.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	RING-type domain-containing protein
Location	ctg1681: 1095005 .. 1096824 (-)
RNA-Seq Expression	Cucsat.G10863.T2
Synteny	Cucsat.G10863.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGAGTTGAGTGCGACGAGGTTCCTCCGATCGCCTATATAAGTGGCCAAAAGGACAGTGAATTGGTCGAATTAAGATGAACTACTGATCATCAATCTTCTTCAATCTTTACCATCTCTACAATTCCACTCTTTTTCTCCAATTTTTTTCCCTTTTCGATCCTACTCTCTCTTCTATTTTCTCTCTTTCTACAGTACTAAAAGCAATTGAAGTAAGTTTTCGTTAATCCCTTTTCCTGTTCATTTCCTTTCTCAAAGAAGTGTTCGCTTTCCTCTAATGGGTTTTGTTTAGTTTCTGAATTTGGTAAAGGAAACGACTCTTTGAGCATTTCAGTTTCATAAATTTCTCTTCTTTTTCACTGGTAGACTCAACTTACTTTGACCACCGGGGGATTATTGTTCTTTATCATGTTTGAGGATGGAGGAGGGTTTTCCATTTTCACTGAAAATTGTGTGGTTTTAATCCCTCAAGAGTGTTTTGTGGAATGTTATGAGGATTTTTTGTTCTTGGGTTTTTAGTCTCTTGAAATTTCTCTTTGTGCCTGGTGGAAGATTTTGTAATTGGATCTTTAACCATAGGGTTTGCTTTTACATAAATCTATTCTTGAATGGTAGGTGGATCATGATTCATGTGATAAATTGTCATTTCATATACTTTAATGGAACTAAATGAACTACCTTCTGTTTTTCCTCAGTTTCTGCTCCTGATCTCTATTGGTTATGGAAATTTCATTAATTAGTTGCTTAGTTCATTTTCTTTCCTGACGATGTGTTCATGAACTTCAGTTATTTATTACATGGTTCATCCAAAAAAAAAAAAAGAGAGAAAAAGCAAGAGGTTCTTAGTTGTTTGTTTACTTTTGTTTCAGCTCTGTCGTGAAGAAAGGCTTGCTTGCAAATTACAAGCTCTGAATCATTGTGTATTTCTGATCAATCTGCTAGTTTTATTCCTGCTGTACCGACTGAGTTTGTGAAGTTTTCTTTAATCACGATGGGTCTCTCCAGTCTCCCAGCTCCGTCGGAAGGAGTTCTGAACGTGATTCTTGTAAACACTGCTCTATCCATTTCCATGTTCAAATGCATTGTTCGTTTAATCCTTCACATGGTAGGAATCCGTCTCTCATGGCCATCAACTATAGTCCCATCACCAGATTCCTTTGAAAGCTCCTCAGAGTTGGGAGATCCCAATTGTGGCTCCTCTTGGAATTACCTTGAGATGTTTCGACACCGATGTCCAAGGATTAGATTCGATAAAGTACCGAGTTCAGAACGTCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCGGCGATAAATCACTTATCTTGTGGCCATCTTTTTCACACAGATTGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGGGAAATCTTGCTTTTGGTGAGTGTTCGGTGCTACAAATCTAGTTAGGGGAAAACTCATGTACAGCACTAGAGACCAAAGTTTGATGTATGTCCTAGAGACCAAAGTTTTGTCCCTGTAAATACATGTTTATGAAGTTCTACGCTTCTAGTTTCTGGCTTGTGCCTTTAGCTTTTAGGTTTTGAGTTAATGCACTATTATTTCACTTTCTTTGTATATGGAATTCTCTGAGTATGCTAAAAGTTTTTCAGCTTCTGTTTGTTTGATATTAAGGTTGACACTTGACAGCATGGGAATTAATTTTCTGAAATTATTGTTTTAATTGATGAGTTGGGGATTGCACAAATCTTGGTGACAACTTATATGCTATATCTTGTAAGTTTTTTT

Coding sequence (CDS)

ATGGGTCTCTCCAGTCTCCCAGCTCCGTCGGAAGGAGTTCTGAACGTGATTCTTGTAAACACTGCTCTATCCATTTCCATGTTCAAATGCATTGTTCGTTTAATCCTTCACATGGTAGGAATCCGTCTCTCATGGCCATCAACTATAGTCCCATCACCAGATTCCTTTGAAAGCTCCTCAGAGTTGGGAGATCCCAATTGTGGCTCCTCTTGGAATTACCTTGAGATGTTTCGACACCGATGTCCAAGGATTAGATTCGATAAAGTACCGAGTTCAGAACGTCGTGAACATGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCGGCGATAAATCACTTATCTTGTGGCCATCTTTTTCACACAGATTGCTTGGAGAAGTGGCTGGACTACTGGAACATCACATGCCCTCTTTGCAGAACTCCTCTAATGTCTGAAGAAGGGAAATCTTGCTTTTGGTGA

Protein sequence

MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSSELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHLFHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW

Homology

[Close]

BLAST of Cucsat.G10863.T2 vs. ExPASy Swiss-Prot
Match: Q9SI09 (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 84/150 (56.00%), Postives = 109/150 (72.67%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRL----SWPSTIVPSPDSF 60
           MGLSSLP PSEG+L VILVNTALSIS+ K IVR  L +VGI L    S PS++  S ++ 
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSEN- 60

Query: 61  ESSSELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERR-EHDCSVCLTQFEPESAINHL 120
            S+SE  D       +YLE FR+R P +RF+ +   +++ +++CSVCL++F+ +S IN L
Sbjct: 61  SSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKL 120

Query: 121 SCGHLFHTDCLEKWLDYWNITCPLCRTPLM 146
            CGHLFH  CLEKW+DYWNITCPLCRTPL+
Sbjct: 121 KCGHLFHKTCLEKWIDYWNITCPLCRTPLV 149

[Close]

BLAST of Cucsat.G10863.T2 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.0e-12
Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 76  MFRHRCPRIRFDKVPSS-ERREHDCSVCLTQFEPESAINHL-SCGHLFHTDCLEKWLDYW 135
           + R   P I+F+++ +S E    +C+VCL +FE E  I  L +C H+FH  CL++W+D+ 
Sbjct: 70  LIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHD 129

Query: 136 NITCPLCRTPLMSEE 149
             TCPLCRTP + +E
Sbjct: 130 QKTCPLCRTPFVPDE 144

[Close]

BLAST of Cucsat.G10863.T2 vs. ExPASy Swiss-Prot
Match: Q9LY41 (E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana OX=3702 GN=ATL4 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10
Identity = 51/149 (34.23%), Postives = 69/149 (46.31%), Query Frame = 0


Query: 4   SSLPAPSEGVLNVILV-NTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSSEL 63
           SSL +    VL +IL+    L IS+  C +   L+    R   P +   S  +  S S  
Sbjct: 19  SSLDSLKPSVLVIILILLMTLLISVSICFLLRCLNRCSHRSVLPLSSSSSVATVTSDSRR 78

Query: 64  GDPNCGSSWNYLEMFRHRCPRIRFDKVP--SSERREHDCSVCLTQFEPESAINHLS-CGH 123
              +  S            P  +F  V   SS     DC+VCL++FEPE  +  L  C H
Sbjct: 79  FSGHRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCH 138

Query: 124 LFHTDCLEKWLDYWNITCPLCRTPLMSEE 149
            FH DC++ WL   N TCPLCR+PL + E
Sbjct: 139 AFHADCIDIWL-VSNQTCPLCRSPLFASE 166

[Close]

BLAST of Cucsat.G10863.T2 vs. ExPASy Swiss-Prot
Match: Q9ZT50 (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-09
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 98  DCSVCLTQFEPESAINHLSCGHLFHTDCLEKWLDYWNITCPLCRTPLMSEE 149
           DC VCL++ +    +  L C H+FH  CLE WL  +N TCPLCR+ L+S++
Sbjct: 85  DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135

[Close]

BLAST of Cucsat.G10863.T2 vs. ExPASy Swiss-Prot
Match: Q9ZU51 (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 92  SERREHDCSVCLTQFEPESAINHLSCGHLFHTDCLEKWLDYWNITCPLCRTPLM 146
           S+    DC VCL++ +    +  L C H+FH  CLE WL + N  CPLCR+PL+
Sbjct: 67  SDNAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLL 120

[Close]

BLAST of Cucsat.G10863.T2 vs. NCBI nr
Match: XP_004144555.3 (probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus] >KAE8645707.1 hypothetical protein Csa_020158 [Cucumis sativus])

HSP 1 Score: 332 bits (850), Expect = 5.42e-115
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPST+VPSPDSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTVVPSPDSFESSS 60

Query: 61  ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 154
           FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW
Sbjct: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 154

[Close]

BLAST of Cucsat.G10863.T2 vs. NCBI nr
Match: XP_008462033.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis melo])

HSP 1 Score: 296 bits (759), Expect = 4.72e-101
Identity = 140/153 (91.50%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+FKCIVRLILHMVGIRLSWPS++VPS DSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60

Query: 61  ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDP  GSSWNYL+MFR+R PRIRFDKV SSERREHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCF 153
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]

BLAST of Cucsat.G10863.T2 vs. NCBI nr
Match: XP_016902815.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X3 [Cucumis melo])

HSP 1 Score: 294 bits (753), Expect = 3.38e-100
Identity = 139/154 (90.26%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISM KCIVRLILHMVGIRLSWPS++V S DSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGD N GSSWNYLEMFR+R PRIRFDKV SS+ REHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 154
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCFW
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 154

[Close]

BLAST of Cucsat.G10863.T2 vs. NCBI nr
Match: XP_008462031.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1 [Cucumis melo])

HSP 1 Score: 294 bits (753), Expect = 4.16e-100
Identity = 139/154 (90.26%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISM KCIVRLILHMVGIRLSWPS++V S DSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGD N GSSWNYLEMFR+R PRIRFDKV SS+ REHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 154
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCFW
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 154

[Close]

BLAST of Cucsat.G10863.T2 vs. NCBI nr
Match: TYK19302.1 (putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa])

HSP 1 Score: 296 bits (759), Expect = 2.59e-99
Identity = 140/153 (91.50%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+FKCIVRLILHMVGIRLSWPS++VPS DSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60

Query: 61  ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDP  GSSWNYL+MFR+R PRIRFDKV SSERREHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCF 153
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]

BLAST of Cucsat.G10863.T2 vs. ExPASy TrEMBL
Match: A0A0A0K534 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031580 PE=4 SV=1)

HSP 1 Score: 308 bits (788), Expect = 7.53e-106
Identity = 145/154 (94.16%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISM KC VRLILHMVGIRLSWPST+VPSPDSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCFVRLILHMVGIRLSWPSTVVPSPDSFESSS 60

Query: 61  ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDPN GSSWNYLEMFR+R PRIRFDKV SS  REHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDPNFGSSWNYLEMFRNRYPRIRFDKVQSSGCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 154
           FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW
Sbjct: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 154

[Close]

BLAST of Cucsat.G10863.T2 vs. ExPASy TrEMBL
Match: A0A1S3CFW8 (probable E3 ubiquitin-protein ligase XERICO OS=Cucumis melo OX=3656 GN=LOC103500499 PE=4 SV=1)

HSP 1 Score: 296 bits (759), Expect = 2.29e-101
Identity = 140/153 (91.50%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+FKCIVRLILHMVGIRLSWPS++VPS DSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60

Query: 61  ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDP  GSSWNYL+MFR+R PRIRFDKV SSERREHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCF 153
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

[Close]

BLAST of Cucsat.G10863.T2 vs. ExPASy TrEMBL
Match: A0A1S4E4A9 (probable E3 ubiquitin-protein ligase XERICO isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500498 PE=4 SV=1)

HSP 1 Score: 294 bits (753), Expect = 1.64e-100
Identity = 139/154 (90.26%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISM KCIVRLILHMVGIRLSWPS++V S DSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGD N GSSWNYLEMFR+R PRIRFDKV SS+ REHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 154
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCFW
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 154

[Close]

BLAST of Cucsat.G10863.T2 vs. ExPASy TrEMBL
Match: A0A1S3CGH9 (probable E3 ubiquitin-protein ligase XERICO isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500498 PE=4 SV=1)

HSP 1 Score: 294 bits (753), Expect = 2.01e-100
Identity = 139/154 (90.26%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSISM KCIVRLILHMVGIRLSWPS++V S DSFE+SS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISMLKCIVRLILHMVGIRLSWPSSVVSSTDSFENSS 60

Query: 61  ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGD N GSSWNYLEMFR+R PRIRFDKV SS+ REHDCSVCLTQFEPESAINHLSCGHL
Sbjct: 61  ELGDSNFGSSWNYLEMFRNRYPRIRFDKVKSSDCREHDCSVCLTQFEPESAINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCFW 154
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCFW
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW 154

[Close]

BLAST of Cucsat.G10863.T2 vs. ExPASy TrEMBL
Match: A0A5D3D707 (Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00210 PE=4 SV=1)

HSP 1 Score: 296 bits (759), Expect = 1.25e-99
Identity = 140/153 (91.50%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLNVILVNTALSISMFKCIVRLILHMVGIRLSWPSTIVPSPDSFESSS 60
           MGLSSLPAPSEGVLNVILVNTALSIS+FKCIVRLILHMVGIRLSWPS++VPS DSFESSS
Sbjct: 1   MGLSSLPAPSEGVLNVILVNTALSISLFKCIVRLILHMVGIRLSWPSSVVPSTDSFESSS 60

Query: 61  ELGDPNCGSSWNYLEMFRHRCPRIRFDKVPSSERREHDCSVCLTQFEPESAINHLSCGHL 120
           ELGDP  GSSWNYL+MFR+R PRIRFDKV SSERREHDCSVCLTQFEPES INHLSCGHL
Sbjct: 61  ELGDPIFGSSWNYLDMFRNRYPRIRFDKVQSSERREHDCSVCLTQFEPESVINHLSCGHL 120

Query: 121 FHTDCLEKWLDYWNITCPLCRTPLMSEEGKSCF 153
           FHT+CLEKWLDYWNITCPLCRTPLMSEE KSCF
Sbjct: 121 FHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF 153

The following BLAST results are available for this feature:

BLAST of Cucsat.G10863.T2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SI09	1.6e-37	56.00	Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=X...	[more]
Q9XF92	5.0e-12	42.67	Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH...	[more]
Q9LY41	2.8e-10	34.23	E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana OX=3702 GN=ATL4 PE=1 SV...	[more]
Q9ZT50	1.0e-09	47.06	E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 ...	[more]
Q9ZU51	1.8e-09	44.44	E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 ...	[more]

BLAST of Cucsat.G10863.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144555.3	5.42e-115	99.35	probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus] >KAE8645707.1 hypo...	[more]
XP_008462033.1	4.72e-101	91.50	PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis melo]	[more]
XP_016902815.1	3.38e-100	90.26	PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X3 [Cucumis melo]	[more]
XP_008462031.1	4.16e-100	90.26	PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1 [Cucumis melo]	[more]
TYK19302.1	2.59e-99	91.50	putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G10863.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K534	7.53e-106	94.16	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031580 P...	[more]
A0A1S3CFW8	2.29e-101	91.50	probable E3 ubiquitin-protein ligase XERICO OS=Cucumis melo OX=3656 GN=LOC103500...	[more]
A0A1S4E4A9	1.64e-100	90.26	probable E3 ubiquitin-protein ligase XERICO isoform X3 OS=Cucumis melo OX=3656 G...	[more]
A0A1S3CGH9	2.01e-100	90.26	probable E3 ubiquitin-protein ligase XERICO isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A5D3D707	1.25e-99	91.50	Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=11946...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 99..140 e-value: 1.0E-5 score: 35.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 98..141 e-value: 5.4E-11 score: 42.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 99..141 score: 12.961374
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 66..146 e-value: 6.2E-17 score: 63.1
None	No IPR available	PANTHER	PTHR47258:SF1	E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED	coord: 1..154
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 93..146
IPR044249	Probable E3 ubiquitin-protein ligase XERICO-like	PANTHER	PTHR47258	FAMILY NOT NAMED	coord: 1..154

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G10863	Cucsat.G10863	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G10863.T2.E1	Cucsat.G10863.T2.E1	exon
Cucsat.G10863.T2.E2	Cucsat.G10863.T2.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G10863.T2.C1	Cucsat.G10863.T2.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G10863.T2	Cucsat.G10863.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane