Cucsat.G10602.T1 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAGCGGCTGACGTTGTGACAGAAGTGAACAAAGAAGAAAATGTGGGGGACACAAGATCAAGTGACTTGAAGGTCAGTTTAAAGTATACTTTAATAATTAAGGCACACTGCTCCACAACAATTCTATATAAGTGTTTAATCTTGTAAGAAGTTTGACATAACCCTGAAAACGTATTGACTAACTTTACGTGCACATATTTAACATATAATTCTACTTAGGTTGGAACTCCGTGTATGCTTGCGTTTGAAACTGAAGATACTATCATTGCACATGGGACAATATTTGATGCTGAAGGTGACGGTGAGAACATCAAGGTATCAGTGGATGTTGTCCTCGATGGCCAATGTGTGATTCCAAATCCGACAAAGGAAGGAGTCACGAAACTGACGCATGAAGTCGGATCACATTTAATGTGGCCACAACATCTTGTTCTTACTAGGAATGATAAGGTAATTGTCTGTCTTATTGTGTTGGAGTTTTTATGCATCAAATTATACTAACAGTAGTTGAAATTTTTGTGATAGAAGGAAACTGTGGGCTTCAATACGGATCCGTCCACATTCTCTAGTG AAAGCGGCTGACGTTGTGACAGAAGTGAACAAAGAAGAAAATGTGGGGGACACAAGATCAAGTGACTTGAAGGTTGGAACTCCGTGTATGCTTGCGTTTGAAACTGAAGATACTATCATTGCACATGGGACAATATTTGATGCTGAAGGTGACGGTGAGAACATCAAGGTATCAGTGGATGTTGTCCTCGATGGCCAATGTGTGATTCCAAATCCGACAAAGGAAGGAGTCACGAAACTGACGCATGAAGTCGGATCACATTTAATGTGGCCACAACATCTTGTTCTTACTAGGAATGATAAGAAGGAAACTGTGGGCTTCAATACGGATCCGTCCACATTCTCTAGT KAADVVTEVNKEENVGDTRSSDLKVGTPCMLAFETEDTIIAHGTIFDAEGDGENIKVSVDVVLDGQCVIPNPTKEGVTKLTHEVGSHLMWPQHLVLTRNDKKETVGFNTDPSTFSS Homology
BLAST of Cucsat.G10602.T1 vs. NCBI nr
Match: XP_031743710.1 (uncharacterized protein LOC116404646 isoform X1 [Cucumis sativus]) HSP 1 Score: 236 bits (602), Expect = 3.68e-75 Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Cucsat.G10602.T1 vs. NCBI nr
Match: XP_031737712.1 (uncharacterized protein LOC116402500 isoform X1 [Cucumis sativus]) HSP 1 Score: 234 bits (596), Expect = 3.34e-74 Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Cucsat.G10602.T1 vs. NCBI nr
Match: KAE8653081.1 (hypothetical protein Csa_019732, partial [Cucumis sativus]) HSP 1 Score: 227 bits (579), Expect = 2.35e-73 Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Cucsat.G10602.T1 vs. NCBI nr
Match: XP_031743711.1 (uncharacterized protein LOC116404646 isoform X2 [Cucumis sativus]) HSP 1 Score: 229 bits (585), Expect = 1.33e-72 Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Cucsat.G10602.T1 vs. NCBI nr
Match: XP_031737714.1 (uncharacterized protein LOC116402500 isoform X2 [Cucumis sativus]) HSP 1 Score: 227 bits (579), Expect = 1.20e-71 Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Cucsat.G10602.T1 vs. ExPASy TrEMBL
Match: A0A0A0KCE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G211850 PE=4 SV=1) HSP 1 Score: 195 bits (495), Expect = 1.88e-61 Identity = 96/105 (91.43%), Postives = 100/105 (95.24%), Query Frame = 0
BLAST of Cucsat.G10602.T1 vs. ExPASy TrEMBL
Match: A0A5A7V2W4 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold386G00370 PE=3 SV=1) HSP 1 Score: 117 bits (293), Expect = 4.49e-28 Identity = 53/113 (46.90%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of Cucsat.G10602.T1 vs. ExPASy TrEMBL
Match: A0A5D3D5Q6 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00960 PE=3 SV=1) HSP 1 Score: 117 bits (292), Expect = 6.07e-28 Identity = 52/113 (46.02%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of Cucsat.G10602.T1 vs. ExPASy TrEMBL
Match: A0A5D3CDJ5 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00340 PE=3 SV=1) HSP 1 Score: 117 bits (292), Expect = 6.07e-28 Identity = 52/113 (46.02%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of Cucsat.G10602.T1 vs. ExPASy TrEMBL
Match: A0A5D3CV25 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00140 PE=4 SV=1) HSP 1 Score: 115 bits (288), Expect = 1.58e-27 Identity = 53/108 (49.07%), Postives = 76/108 (70.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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