Cucsat.G10550.T1 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G10550.T1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein LATERAL ROOT PRIMORDIUM 1
Location	ctg1678: 855597 .. 859012 (+)
RNA-Seq Expression	Cucsat.G10550.T1
Synteny	Cucsat.G10550.T1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTAAACTATGGAATTCCTTATCTAATAAAAAAAATTAATTGATGTATTATTATTAGAAAATCTAAATTATGAATCTCCAAACAATCAAATTAGTTAATATCACTCCTAAGGTAGAAATAAAATAATATTATAATAGGGGTTATTTTTAAAAAGATAAAGAGAGAGAGAGAAAAAAAGGTTAATGCAGAATTGAAATAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAATACATTATATTTTTATTATATTTATAGTTATTCCCTTTCTTCCTCACAAACCTAAATTAAACTTTGTCACAGCAACAGTTTGAAGAATCATTCATTCCAGTTTCCATTTTTCATTTGCCAATTTTCAATTTCCATTTTCCATTTCCATTTCCATTCCACTCATCATCATCATCATCATCGTCGTCGTCGTCGTAATCTTCTTCTTCTTCTTCCTCCTCCTTCATCTCATCTCATCTCATCTCATCAGTCATCTGTTACTGTGAAATGAAACAGAATTCCACTTCATTACACACAATTGCTTTTGCTCTAATAAAATTTTCTTCTTTTTCCCAACACTGCATAATCCCCACATCCCATAACAACTAACTCTCTCTCTCTCTCTCAATTTTCATCATAAACACACCCTCTTCTTGGCTCTTTCTATCTCAACCTCTCTTCTTCTAATTTCCTCTCATCACCTTTTTTTTTCTTTTTCTATTTTTTTTTCTTTTTGAGCTTTTTCCAATCAACAAAATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACACCTTCTTCTCTTCACCAACAGACTCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTTCCCTCCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTTCCTCCCTCCCAGCCCCCACCAAATAATCACACACCTGACGATGTTACCGATCGTACTCGCACTTTCGACAATCTTAAGAGAACCCAAGATTTTGGCTTTGGGAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGCGATGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCTGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCCGCTGCTTCCACTTCCAATGCCACAACTCCCCGGAGCTTTGAAACAACCTCTAGCCATCAAGGTAAATCTCTCTCTAACTCTCTCTTTCCATTCTTCCATTTTTGTTTTCTTGTGCTTCTCAACGAATTCCGAATCATGAGCAGAAATTAATGGGATATCTGTTTACTCTGTTTCTTTCTGTTTAATGATTTGGTTACTTGTTTCTACGTGTATAAATTTGTAAAATTTTTATGAGTAGTTTTTATTTTAGTTCTCTTTGAAGATCTTGCAGCAAATTTAACGAAACATGTTCATTAGGTATGTTGTTCGAAAACTTACCATCCTTTCATGTTATAACTCTGTTTTTCTCCTCTTTCTCTCTCTCCTTTCTCCAACAAGGAGGGAGTGACTTATATATAAAAGTAGAATTTAGGACCGTTTGTAAATGGCATTTCGAGTGCTTAAAAGATAAGTTTTTGTTTTTTTAAGTGTTTGTGTTTAGTAAGGAGCTTAAGTATTTAAAAAGGGGTTCAAGTGTTTAGAAAGCCATTCCAAACAGGCTTTGTGCTGTTAAAACATGCACATCTATATGTATTCTAACTGTGTTTTTTTAGCAACAAGATCATTTTCTAAACCCACCTCTTGGAATTCTCCTCACTTTGAAACCAGATGCAAGCTTCAAGAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTCCTCTATGATCAAGGAGCTGATGACAAAAATGCATTCCCATCTATTTCACATCTCCATTTGGACAGTGGTAACCACCACAGGGAATAGACATTCCTTCTCTTCATTCTTCTCCAATTCTCCCTCTGATCACTCTTCTCCTCCTGAAAACTCGGTCTTGACCACTTGAAAAAATATGATATCTTTGCTAGATTTCAGAGGTCTGTTATGTTATCTGTAAGTTTCATATAGTTGTTATCATGGTGGTAATGCAATGAATCTTGCACTAAATAGAACACAAAAGTGCATAGTTGTAATAGGAATTTTCTGTTCTAGCCTTAAGCTGGGTTTAGTGTAAGATTTATCAAGTTCAAAGATAGTTGGATATTGATCTTCTGTATATTGCTTAGAAGATGTGTAACTTTCATCTATCCAAATATCTGCTGAAACAAGAGTTAGCTTGTCTTATTTCATAGCAGCTGTATTATATGTTGGGATACAAGAGTTCAGTCTCTTCTTTTACTGTCTATCTCAAAGAGTTTTACGAAACAAATGAAATCGTTCATCTGAGTAAGTTCTTGCGAAATTCCACGATGGTGAAACAGGCAAAATGTATGTAATGCTTCCTCTTTCTACATTACTGTCATTTGTCTTCATCTTTGAACATTTTCAGTGATTTGGATCGTCTCCAATTATGAGATGGGTTTCATTGAATGGAAGTCATTTATTTGATTGAGACGAATTTGATGGTGAATATGTAGGGAGAACCAGATATAAGTAAAGTCGGGACCCCACATGACACGAACAATATAAGCAGAAGATGAAAGTTAGTGAAGCGTAGTTCCATTCTCATCACATTTTTAGCAAAAAAGAAAGCCAGAGAGCAATGGAGATGAACACTAAAAACTGAAAAGTGGGAAGGAAAGAGCAAAGCAGTGTAAGAATTACCAAAACTTGAGAAGAGTTAAAAGAGAAAAAGAAGCATTGATGATTGATGGAGAAGAGAAAAGGATGAATATGAAAACAGTACCAATTGAGACTCAGTTGTTAAAGGAGAGGGATTTTCTTCTTCCCAGATGACATTAAGAAAAAGGTATGCATTAAAAGGGATGAACAAAATGAATAGGTGAGACCAATAACCCCCACCCCCTTTTTGTCTTTTCATATAGGAATTGTTAGGCCTAAGTGAATGTGTAGGAGATTGAGTCCAATTACATATCATTGCAAATGCCAAAAACAGATGTGACAAAGTAGTGGTAAGGCAAAAACATGCACTTTTATTATA

Coding sequence (CDS)

ATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACACCTTCTTCTCTTCACCAACAGACTCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTTCCCTCCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTTCCTCCCTCCCAGCCCCCACCAAATAATCACACACCTGACGATGTTACCGATCGTACTCGCACTTTCGACAATCTTAAGAGAACCCAAGATTTTGGCTTTGGGAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGCGATGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCTGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCCGCTGCTTCCACTTCCAATGCCACAACTCCCCGGAGCTTTGAAACAACCTCTAGCCATCAAGATGCAAGCTTCAAGAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTCCTCTATGATCAAGGAGCTGATGACAAAAATGCATTCCCATCTATTTCACATCTCCATTTGGACAGTGGTAACCACCACAGGGAATAG

Protein sequence

MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE

Homology

[Close]

BLAST of Cucsat.G10550.T1 vs. ExPASy Swiss-Prot
Match: Q94CK9 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 9.4e-55
Identity = 142/309 (45.95%), Postives = 179/309 (57.93%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------G 62

Query: 61  PPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDG 120
            P  N    D+       R +  +N   TQ   F        G  +N S       +G  
Sbjct: 63  TPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGAS 122

Query: 121 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVAT 180
             A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        
Sbjct: 123 GTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTG 182

Query: 181 ASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKS 240
           A+   GSS S+S+G K+PR++   Q     A + TS + T P+SFET+SS QD    +++
Sbjct: 183 ANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREA 242

Query: 241 LPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHL 300
            PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K  FPS+S L
Sbjct: 243 WPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSDL 291

Query: 301 HL-DSGNHH 302
           HL  S N+H
Sbjct: 303 HLGGSANNH 291

[Close]

BLAST of Cucsat.G10550.T1 vs. ExPASy Swiss-Prot
Match: Q9M2U4 (Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-31
Identity = 78/174 (44.83%), Postives = 100/174 (57.47%), Query Frame = 0


Query: 119 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASG 178
           VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P++  R                
Sbjct: 40  VCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR---------------- 99

Query: 179 DGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHV 238
                 SSS   ++ ++ I  QS+   +              TT+S Q+  F++ LPG +
Sbjct: 100 -----SSSSPSERKKKLKIDKQSSPNVSL-----------LPTTTSRQERGFREGLPGKI 159

Query: 239 RAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGADDKNAFPSIS 292
            APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G D   AFP +S
Sbjct: 160 EAPAVFKRTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYYGVDHNKAFPCLS 181

[Close]

BLAST of Cucsat.G10550.T1 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.3e-31
Identity = 80/164 (48.78%), Postives = 103/164 (62.80%), Query Frame = 0


Query: 120 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 179
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG 
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHM----STSGG 153

Query: 180 GGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVR 239
           GG SGS  AG       IP +        ++S++  P S        +ASF    PG V 
Sbjct: 154 GGGSGSGGAGGGGSS--IPKRHRDPTLPGTSSSSRLP-SHSAGLEMGEASF----PGEVS 213

Query: 240 APAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGAD 283
           + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG +
Sbjct: 214 SDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246

[Close]

BLAST of Cucsat.G10550.T1 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-28
Identity = 99/267 (37.08%), Postives = 130/267 (48.69%), Query Frame = 0


Query: 18  HQQTQII--SSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRT 77
           H Q +I+     H   L L SS A G+ VG                 P+NH   D++   
Sbjct: 75  HNQQEIMFQHQQHQQRLDLYSSAA-GLGVG-----------------PSNHNQFDIS--- 134

Query: 78  RTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVK-GDAGDGSMAV-CRDCGNRAKKECEY 137
                           GE+  AG G   +   ++ G +G GS  V C+DCGN+AKK+C +
Sbjct: 135 ----------------GETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSH 194

Query: 138 RRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRP 197
            RCRTCCK RG  CSTHV+STWVPAA+RRERQ  +      T    G S        KR 
Sbjct: 195 MRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQPQTQLPRGESV------PKRH 254

Query: 198 RVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAIS 257
           R  +P+ S++       S+          S  +  +F    P  V + AVFRC RV+++ 
Sbjct: 255 RENLPATSSSLVCTRIPSH----------SGLEVGNF----PAEVSSSAVFRCVRVSSVE 284

Query: 258 SGEGELAYQATVNIGGHVFKGFLYDQG 281
            GE E AYQ  V+IGGH+FKG LYD G
Sbjct: 315 DGEEEFAYQTAVSIGGHIFKGILYDLG 284

[Close]

BLAST of Cucsat.G10550.T1 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-27
Identity = 81/204 (39.71%), Postives = 111/204 (54.41%), Query Frame = 0


Query: 86  DFGFGKGES-----LIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 145
           D G G G S     + AG         V   +G G ++ C+DCGN+AKK+C++ RCRTCC
Sbjct: 91  DVGLGVGPSRSGFDISAGDHEASRSGFVMMRSGGGGIS-CQDCGNQAKKDCQHMRCRTCC 150

Query: 146 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ 205
           K RG  C THVKSTWVPAA+RRERQ  +           G ++ +++   KR R     +
Sbjct: 151 KSRGFQCQTHVKSTWVPAAKRRERQQQL---AALQQQQQGHNNNNNNHKNKRQR-----E 210

Query: 206 SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA 265
             +A++  ST   +     E              P  VR  AVF+C ++++I   E +LA
Sbjct: 211 DPSASSLVSTRLPSNTNGLEV----------GKFPSKVRTSAVFQCIQMSSIEDDEDQLA 270

Query: 266 YQATVNIGGHVFKGFLYDQGADDK 285
           YQA V+IGGHVFKG LYDQG + +
Sbjct: 271 YQAAVSIGGHVFKGILYDQGHESQ 275

[Close]

BLAST of Cucsat.G10550.T1 vs. NCBI nr
Match: XP_004142483.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical protein Csa_008495 [Cucumis sativus])

HSP 1 Score: 602 bits (1551), Expect = 6.71e-217
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300
           PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
Sbjct: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300

Query: 301 HRE 303
           HRE
Sbjct: 301 HRE 303

[Close]

BLAST of Cucsat.G10550.T1 vs. NCBI nr
Match: XP_008446964.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo])

HSP 1 Score: 600 bits (1547), Expect = 2.73e-216
Identity = 302/303 (99.67%), Postives = 302/303 (99.67%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300
           PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
Sbjct: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300

Query: 301 HRE 303
           HRE
Sbjct: 301 HRE 303

[Close]

BLAST of Cucsat.G10550.T1 vs. NCBI nr
Match: KAA0034761.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa])

HSP 1 Score: 590 bits (1520), Expect = 6.47e-212
Identity = 302/319 (94.67%), Postives = 302/319 (94.67%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQD------------- 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQD             
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDQFLNPPLGILMTL 240

Query: 241 ---ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300
              ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Sbjct: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLDSGNHHRE 303
           NAFPSISHLHLDSGNHHRE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 319

[Close]

BLAST of Cucsat.G10550.T1 vs. NCBI nr
Match: XP_038892899.1 (protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida])

HSP 1 Score: 555 bits (1430), Expect = 1.80e-198
Identity = 283/303 (93.40%), Postives = 290/303 (95.71%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSS ALGVSVGIFPLL ATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLTATPCLPPPQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           P PN  T DDVTDR+R+ +NLKRTQDFGFGKG+SL+ G GNN SDE VKGDAGDGSMAVC
Sbjct: 61  PLPNQ-TADDVTDRSRSLENLKRTQDFGFGKGDSLMGGAGNNVSDEQVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRPRVLIPSQS AAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSTAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300
           PAVFRCHRVTAI+SGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
Sbjct: 241 PAVFRCHRVTAINSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300

Query: 301 HRE 303
           HR+
Sbjct: 301 HRD 302

[Close]

BLAST of Cucsat.G10550.T1 vs. NCBI nr
Match: XP_022956997.1 (protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita moschata])

HSP 1 Score: 506 bits (1303), Expect = 3.12e-179
Identity = 261/303 (86.14%), Postives = 279/303 (92.08%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL---Q 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPN   PD+++DR+R+ +NLKRTQDFGFGKG+SLI G GN+G D+ VKGD GDGS+ VC
Sbjct: 61  PPPNQ-MPDELSDRSRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS---- 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRP+VLIPSQ+ AAAAAASTSNATTPRSFETTSSHQDASFKKSLPG V+A
Sbjct: 181 GSSGSSSAGAKRPKVLIPSQTTAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGQVQA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300
           PAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQGAD KNA PSISHLHL+SGNH
Sbjct: 241 PAVFKCHRVTAISSGEGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLHLESGNH 295

Query: 301 HRE 303
            R+
Sbjct: 301 LRD 295

[Close]

BLAST of Cucsat.G10550.T1 vs. ExPASy TrEMBL
Match: A0A0A0KWX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1)

HSP 1 Score: 602 bits (1551), Expect = 3.25e-217
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300
           PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
Sbjct: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300

Query: 301 HRE 303
           HRE
Sbjct: 301 HRE 303

[Close]

BLAST of Cucsat.G10550.T1 vs. ExPASy TrEMBL
Match: A0A1S3BFS5 (protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 SV=1)

HSP 1 Score: 600 bits (1547), Expect = 1.32e-216
Identity = 302/303 (99.67%), Postives = 302/303 (99.67%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300
           PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH
Sbjct: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300

Query: 301 HRE 303
           HRE
Sbjct: 301 HRE 303

[Close]

BLAST of Cucsat.G10550.T1 vs. ExPASy TrEMBL
Match: A0A5D3CCT8 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G003120 PE=3 SV=1)

HSP 1 Score: 590 bits (1520), Expect = 3.13e-212
Identity = 302/319 (94.67%), Postives = 302/319 (94.67%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQD------------- 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQD             
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDQFLNPPLGILMTL 240

Query: 241 ---ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300
              ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Sbjct: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLDSGNHHRE 303
           NAFPSISHLHLDSGNHHRE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 319

[Close]

BLAST of Cucsat.G10550.T1 vs. ExPASy TrEMBL
Match: A0A6J1GXY1 (protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458506 PE=3 SV=1)

HSP 1 Score: 506 bits (1303), Expect = 1.51e-179
Identity = 261/303 (86.14%), Postives = 279/303 (92.08%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL---Q 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPN   PD+++DR+R+ +NLKRTQDFGFGKG+SLI G GN+G D+ VKGD GDGS+ VC
Sbjct: 61  PPPNQ-MPDELSDRSRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS---- 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRP+VLIPSQ+ AAAAAASTSNATTPRSFETTSSHQDASFKKSLPG V+A
Sbjct: 181 GSSGSSSAGAKRPKVLIPSQTTAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGQVQA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 300
           PAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQGAD KNA PSISHLHL+SGNH
Sbjct: 241 PAVFKCHRVTAISSGEGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLHLESGNH 295

Query: 301 HRE 303
            R+
Sbjct: 301 LRD 295

[Close]

BLAST of Cucsat.G10550.T1 vs. ExPASy TrEMBL
Match: A0A6J1CEG6 (protein LATERAL ROOT PRIMORDIUM 1 OS=Momordica charantia OX=3673 GN=LOC111009988 PE=3 SV=1)

HSP 1 Score: 503 bits (1294), Expect = 6.13e-178
Identity = 268/309 (86.73%), Postives = 279/309 (90.29%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQT-QIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPS 60
           MLGLRDVLFIAPTPSSLHQQT QIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  
Sbjct: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP-- 64

Query: 61  QPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAV 120
           QPPP      +V++R R  DNLKRTQDFGFGKG+SLIAG GNN  DE V+GDAGD SM V
Sbjct: 65  QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-GNNALDEPVRGDAGDSSMGV 124

Query: 121 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 180
           CRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGD
Sbjct: 125 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 184

Query: 181 GGSSGSSSAGAKRPRVLIPSQSAAAAAAAS-----TSNATTPRSFETTSSHQDASFKKSL 240
           GGSSGSSSAGAKRPRVLIPSQS AAAAAAS     TSNATTPRSFET+S+HQDASFKKSL
Sbjct: 185 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 244

Query: 241 PGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLH 300
           PG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDKN FPS+SHLH
Sbjct: 245 PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDKNGFPSVSHLH 304

Query: 301 LDSGNHHRE 303
           L+SGNHH +
Sbjct: 305 LESGNHHHK 309

The following BLAST results are available for this feature:

BLAST of Cucsat.G10550.T1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CK9	9.4e-55	45.95	Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 S...	[more]
Q9M2U4	1.9e-31	44.83	Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1	[more]
O65517	3.3e-31	48.78	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]
Q9SD40	2.0e-28	37.08	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
K4B6C9	3.7e-27	39.71	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]

BLAST of Cucsat.G10550.T1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142483.1	6.71e-217	100.00	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical pro...	[more]
XP_008446964.1	2.73e-216	99.67	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]	[more]
KAA0034761.1	6.47e-212	94.67	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein...	[more]
XP_038892899.1	1.80e-198	93.40	protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]	[more]
XP_022956997.1	3.12e-179	86.14	protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita moschata]	[more]

BLAST of Cucsat.G10550.T1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWX6	3.25e-217	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1	[more]
A0A1S3BFS5	1.32e-216	99.67	protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 S...	[more]
A0A5D3CCT8	3.13e-212	94.67	Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1GXY1	1.51e-179	86.14	protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1CEG6	6.13e-178	86.73	protein LATERAL ROOT PRIMORDIUM 1 OS=Momordica charantia OX=3673 GN=LOC111009988...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05142	DUF702	coord: 118..282 e-value: 3.5E-57 score: 193.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..115
None	No IPR available	PANTHER	PTHR31604:SF28	PROTEIN SHI RELATED SEQUENCE 6	coord: 1..296
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 234..280 e-value: 3.4E-26 score: 88.9
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 119..161 e-value: 1.4E-24 score: 83.8
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..296

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G10550	Cucsat.G10550	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G10550.T1.E1	Cucsat.G10550.T1.E1	exon
Cucsat.G10550.T1.E2	Cucsat.G10550.T1.E2	exon
Cucsat.G10550.T1.E3	Cucsat.G10550.T1.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G10550.T1.C1	Cucsat.G10550.T1.C1	CDS
Cucsat.G10550.T1.C2	Cucsat.G10550.T1.C2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G10550.T1	Cucsat.G10550.T1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding