Cucsat.G10112.T13 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGGAGGCTTTTTTTTTTTTTATTTTGATGCCATATATTGACCTTGAAGTCAGCCGGTGGTGGTTAGCCAAGTGGAGTTTCGATGTTTGTTTTGAGGGAAATTTGGAGTTTTATGAGTAAATTAGGCTTTCTCAAGTTTTATGTCTTTCCCAAATCAACTAGAGTGTTTTCTAAAACTCTTTTTGCCTCAGCAAAATGCAAAAGAAGGTACTATCAAGTTCTTTTATACTTACAATGAGCTAGAATTGGATTGACATTAGACTTAAGACTTAGCAGTGGCTACTTATTATTCGCATTTAATCTGGTTTTAGTTATGTACAGAGTCACTCTAGCTGACCAAACTACTTTCGATGCGAAAGTTGTTGGATTTGACCAAGACAAGGATGTTGCTGTCTTGAGTATCGATGCACCTAAAGACAAACTAAGACCTATACCTGTTGGTATATCAGCAGATTTGCTTGTTGGTCAAAAGGTGTTTGCTATTGGAAACCCTGTAAGTTTTTCTATTCATTGCCCTTTTTCCCTGGGTGTATGTGCACATTATCATATCCATTCATCTTTTATATCAAAGTTCATGCTATTGATTTCTTAAAACAAAAATGAAAAATCTAGGATGAAGCGATCTCTGGAAAGAGGATAATCTCTTAAAATGTTTTCAAAAGAGGAAAACCCCAGATTAATTTTGCGTTAAATGGACAATCCTTATATGCTATAGTTTTATCTACAAAATCAATCGGGGGAATGAACTCATTGTTTAGATTAACTAGGAAAAAAATTGTTTTAAAATTTTTGTATGTAAATCTTTTTTTGATAAAGACAACTATTTCAAAAGCTATTTTGAGTAGTTGTTAAACACTTCTATTTTTTCTAAAATGTCTTAGTTTTAAAATAAAATTCTTGAAATGTTAAACCGACCATAGTCTTAGTTGGGAGATGATCACCCCTTTTTTCATTTTCCCTGAAGCCAGTCTCTTCATTTGTTATCTTGTACATTTCCCCATTTGATGAACTAAAAATATAGTAATTTTCGTCTGTGCAGTTTGGACTGGATCATACTCTTACAACTGGTGTAATCAGGTATGAAACCCACAAGTTTTAATGGATTATATTCCTCACAAATTCTTTAGAAATTTACATTTTAATTTAGTATGTTAATCTTATACTATAATTGAGCCCCCCAAAAATTATTAGAGATTGTAATTTCAATTAACAATAATCACGAAGATGATGTTTGTTTTAGAGTTGAAATAATTCTGTTTATATATGTCTCCTTTTTACTTTTCCTAAAATTGTTTATTTTCTTCATGATCCTTCAAATGCAAAATGGGTTTATCCTTATGAGACATGTTATATTTTTACTATTTGGTTGCGGTCGAAACCTGTATTCATAGGCTTTGAAACTAGGGGTGATCATCAATGGATCGACCAGCAGACAATAGTTGGGTTTCCAGAAAATTTCGAAATTTTTTGGAAATCCAACATTCTCACTGAATTGCCTCTCTTACTCCCTCTGACCAACCAACTTGGCCGGTCATCTTGGTTTTGCGGTCTATCATGCTCACCCTATTTGAAACTGTAATACTAAACATTCAACTTGCCCTTGACAGTGGCCTTCGGAGAGAAATTAGTTCTGCGGCTACTGGTAGGCCAATTCAAGATGTCATACAGACGGATGCTGCCATTAATCCAGGAAACAGTGGAGGGCCACTTCTCGATAGTTCGGGGAACCTTATTGGAATTAATACGGCAATATATTCTCCATCTGGGGCCTCCTCTGGTGTTGGATTTTCAATTCCTGTTGACACAGTTAGTACACATGACATATAATTAACAAATTGAAGTTCCCTTAGTTTGATATTTGAAGTACATGATCCATTAACATTCTGTCAATTTAGGTGAGTGGTATTGTTGATCAGTTGGTGCGATTTGGGAAGGTGACAAGACCAATTTTAGGAATCAAGTTTGCTCCCGATCAGTCTGTCGAACAGTTGGGTGTAAGCGGAGTGCTTGTCTTAGATGCTCCTGCTAATGGTCCTGCTGGGAAAGCTGTACTCATTTCCTCTCTTTTCCTATCTGCATTCATATTCTTATATTCCTATAGGTTTCAATATTCCATTATGTTTACAAGAACTTATGAACGTCCCCCAACCTTAATACTTCGGTTCAAGAAGATCTAATCGCTTGACATTATGCAGGGCCTGCTACCGACTAAGCGCGATGCTTATGGTAGACTTATATTGGGAGACATAATAACATCAGTGAATGGCAAAAAGGTCACAAATGGAAGCGATTTGTATAGAATTCTTGACCAATGTAAAGTTGGTGATAAGGTAGCCTTCATTTCCCTGTTTGATCTTTTTACTTCAGCTTGTTTGAACTTTTTAACTTTTGAAGAAAGGCATCATACTGCTTTTATTTTAAGATGTTGGGAAGTAATTTAAAACTTTGGTTCATGCTTGAGTGGATCCATAATAAAGTTAGTAAATAGGCTGGTTTGATTGAATCTGTTGGATCCACGCACTGTTTGCCATTGTGTGCCATTGAATTCTCTGTGTCACGTAGTCATTTTTTTTTCAAAGAACTAAGAAGGATTTAAGACATGTTTGGAGATTTTGAAGTAGTCAAAATCATTTTTGTCATGTTGAAAATCACTTACAACAGTGCTAAGTTAATATAATTTAATTTTTACATTTTAAAACCCGATTTTCATACCGGGTAAAAGTAAATATTTTATCAACCTTTCTTTCTTATAGAATTATCTATGGGGTGTTTCTTCCTATAGTTTTGAAGTTTCTTATTGTATAGTATCTTAAAAGTTGAAATATCTTTTCATGTAGCATCATCGATCATGTGCCTTTTCAAAATTCATTTCACTAAATATTATAATCCGCATTTATGCATCAGTGGGAATTATTAAATGGTTCTATCCACTTGAACTAATGAATATTCTTCAAAACTTTGAGTTATGAAAAAGACAGCCAGATCCCATGTGATAAAATCCCATTGCCATCATATATATTGCCTCATAATGCTGAACAGTAGCATAGCATGTGGCTTTTAGTGACATTACACAGCCACAAAACCTTTGAATCGGCCTTTTTTTACTTGGGACAAAGAAGAACGAAGTTTTAATCCTATTTTTTTCATTAACTCCCTGCTTTCTTTTATTTTGATCCTCAAACTTTCAAAAACCGTATTTTAACTCATAAACTTTTAAGCATTCAATAAACAAGTTCCGATTACAAATATAACATTTAAACTCAAAATATTAACCGAGGTAACACATTTTCAAAGCATTTGTAGATATTGTATAGCAAACTTTAGATCCATCTCTATTACCAACAAGAGTTCTATCAACAATAGAGTTTATTACTTGTAGATTTTGTTATATTTACAATTCTTTGAACATGTTAGTGTGTGCTAAGTTGTTAACCCTAAAAGTTGTATGTAGTGGTGATGCTAAGAAAAGGAAATATTTGCATGAATCTGCGGTATAGCAGAACAGGGTATGATGATAAGTAACAATTTGTTTGATGATATAGGTAACTGTGGAGGTACTACGTGGTGATCACATGGAGAAAATTCCAGTAATTCTGGAGCCAAAGCCTGACGAATCTTGAGCCAAACATAGTTGGGGGGGTTTGTCTTGGTTTTTTCTTCTCTCTTTTTTGTACATTACATTAATCAATATTAACAAGCTGTTTGTAAATAGTCTATTCTGGCTGCCACTCTGGCCCTTTTCTCAACTAATCACACTTCAAAAGAAGATTAAATTACAAGTTTTTTAAGTTGTATTTAATAGATCCTTCAATTTTAAAAATTATAGTTTCATAAGCTTCTCCATTT ATGTTTGTTTTGAGGGAAATTTGGAGTTTTATGAGTAAATTAGGCTTTCTCAAGTTTTATGTCTTTCCCAAATCAACTAGAGTGTTTTCTAAAACTCTTTTTGCCTCAGCAAAATGCAAAAGAAGAGTCACTCTAGCTGACCAAACTACTTTCGATGCGAAAGTTGTTGGATTTGACCAAGACAAGGATGTTGCTGTCTTGAGTATCGATGCACCTAAAGACAAACTAAGACCTATACCTGTTGGTATATCAGCAGATTTGCTTGTTGGTCAAAAGGTGTTTGCTATTGGAAACCCTTTTGGACTGGATCATACTCTTACAACTGGTGTAATCAGTGGCCTTCGGAGAGAAATTAGTTCTGCGGCTACTGGTAGGCCAATTCAAGATGTCATACAGACGGATGCTGCCATTAATCCAGGAAACAGTGGAGGGCCACTTCTCGATAGTTCGGGGAACCTTATTGGAATTAATACGGCAATATATTCTCCATCTGGGGCCTCCTCTGGTGTTGGATTTTCAATTCCTGTTGACACAGTGAGTGGTATTGTTGATCAGTTGGTGCGATTTGGGAAGGTGACAAGACCAATTTTAGGAATCAAGTTTGCTCCCGATCAGTCTGTCGAACAGTTGGGTGTAAGCGGAGTGCTTGTCTTAGATGCTCCTGCTAATGGTCCTGCTGGGAAAGCTGGCCTGCTACCGACTAAGCGCGATGCTTATGGTAGACTTATATTGGGAGACATAATAACATCAGTGAATGGCAAAAAGGTCACAAATGGAAGCGATTTGTATAGAATTCTTGACCAATGTAAAGTTGGTGATAAGGTAACTGTGGAGGTACTACGTGGTGATCACATGGAGAAAATTCCAGTAATTCTGGAGCCAAAGCCTGACGAATCTTGA MFVLREIWSFMSKLGFLKFYVFPKSTRVFSKTLFASAKCKRRVTLADQTTFDAKVVGFDQDKDVAVLSIDAPKDKLRPIPVGISADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGNLIGINTAIYSPSGASSGVGFSIPVDTVSGIVDQLVRFGKVTRPILGIKFAPDQSVEQLGVSGVLVLDAPANGPAGKAGLLPTKRDAYGRLILGDIITSVNGKKVTNGSDLYRILDQCKVGDKVTVEVLRGDHMEKIPVILEPKPDES Homology
BLAST of Cucsat.G10112.T13 vs. ExPASy Swiss-Prot
Match: O22609 (Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DEGP1 PE=1 SV=2) HSP 1 Score: 471.1 bits (1211), Expect = 9.4e-132 Identity = 241/258 (93.41%), Postives = 247/258 (95.74%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. ExPASy Swiss-Prot
Match: Q9LU10 (Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DEGP8 PE=1 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.8e-66 Identity = 140/249 (56.22%), Postives = 174/249 (69.88%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. ExPASy Swiss-Prot
Match: Q2YMX6 (Probable periplasmic serine endoprotease DegP-like OS=Brucella abortus (strain 2308) OX=359391 GN=htrA PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.6e-43 Identity = 107/261 (41.00%), Postives = 148/261 (56.70%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. ExPASy Swiss-Prot
Match: P0C114 (Probable periplasmic serine endoprotease DegP-like OS=Brucella abortus biovar 1 (strain 9-941) OX=262698 GN=htrA PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.6e-43 Identity = 107/261 (41.00%), Postives = 148/261 (56.70%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. ExPASy Swiss-Prot
Match: Q8YG32 (Probable periplasmic serine endoprotease DegP-like OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) OX=224914 GN=htrA PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.6e-43 Identity = 107/261 (41.00%), Postives = 148/261 (56.70%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. NCBI nr
Match: XP_008458762.1 (PREDICTED: protease Do-like 1, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 500 bits (1287), Expect = 3.91e-177 Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. NCBI nr
Match: XP_004142804.1 (protease Do-like 1, chloroplastic [Cucumis sativus] >KGN51390.1 hypothetical protein Csa_008466 [Cucumis sativus]) HSP 1 Score: 502 bits (1293), Expect = 1.54e-175 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. NCBI nr
Match: XP_008458761.1 (PREDICTED: protease Do-like 1, chloroplastic isoform X1 [Cucumis melo] >KAA0037525.1 protease Do-like 1 [Cucumis melo var. makuwa] >TYK02000.1 protease Do-like 1 [Cucumis melo var. makuwa]) HSP 1 Score: 500 bits (1287), Expect = 1.26e-174 Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. NCBI nr
Match: XP_038890591.1 (protease Do-like 1, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 500 bits (1287), Expect = 1.30e-174 Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. NCBI nr
Match: XP_022939051.1 (protease Do-like 1, chloroplastic [Cucurbita moschata]) HSP 1 Score: 496 bits (1276), Expect = 6.56e-173 Identity = 255/258 (98.84%), Postives = 256/258 (99.22%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. ExPASy TrEMBL
Match: A0A1S3C9V0 (protease Do-like 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498072 PE=3 SV=1) HSP 1 Score: 500 bits (1287), Expect = 1.89e-177 Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. ExPASy TrEMBL
Match: A0A0A0KP41 (PDZ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G524830 PE=3 SV=1) HSP 1 Score: 502 bits (1293), Expect = 7.44e-176 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. ExPASy TrEMBL
Match: A0A5A7T7V2 (Protease Do-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G001140 PE=3 SV=1) HSP 1 Score: 500 bits (1287), Expect = 6.08e-175 Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. ExPASy TrEMBL
Match: A0A1S3C962 (protease Do-like 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498072 PE=3 SV=1) HSP 1 Score: 500 bits (1287), Expect = 6.08e-175 Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of Cucsat.G10112.T13 vs. ExPASy TrEMBL
Match: A0A6J1K2S4 (protease Do-like 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489550 PE=3 SV=1) HSP 1 Score: 496 bits (1276), Expect = 3.17e-173 Identity = 255/258 (98.84%), Postives = 256/258 (99.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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