Cucsat.G10112.T12 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGGTTGAAATTGGATTTCATTCATCGATTCAATTTTCAGCAACTGTCCAACAAACCCAAAACAAATGGCTGCTGCTGCTGCATTTTCTCTGCTGCCTTCTTCACTTTCTCGTCCTCCTAAAAGACCACCCACTTCCTTTTTTCTCTCAAAGTCCATTTCTTTTCACAATTTTTCCAATCCCACCCGCCATTTTAGATACCCCATCTTCTCTCTTCTTCACCACAACAAGAAACACTCCCAATTTTCTCCTTCAATTCTTCCAAAACTCCCCGTTCCCTCCAACCCCTTTGCTTCAATTTGCGAATCGCTTCTTGTTTTCTCCACTTCGGTGCTCTTGTCCTTTGCTCTTTTTGTAACAGATGTTGATCCGGCGGTTGCTTTTGTTGTCACTACGCCGAGGAAGTTGCAGACGGATGAGCTCGCTACAGTTCGTCTTTTTCAGGAGAATACTCCTTCTGTTGTTTATATCACGAATCTTGCTGTTAGGTAATTGTATTATTATACCCTTTTGGAGCTGACTTCTGATTACAGTTTTTTCTTTTTTTTCTCAATATAAGAAATATTTCATTGAAAGAATGATGTTAGCGCCTTAGCGGAGACCCTAGGCACCACTAATGATTTCCGATCAGAAACTAAGAAAGAGTGAAACTCTTGAGAGTGTGCCTGGTATTGCACCAGTACAACGCAGTAGATAGAACCAAATTCATTAAACTATCGAAACAAGTAGAGGAATTTCTAAAGAGATGCTTATTATGTTTGCCCCATAGTACGCAATATGGCCAACCAATGATTTTATGTAAATTTTAGGCAGGATGCTTTTACTTTAGACGTGCTGGAGGTACCACAGGGGTCCGGTTCTGGATTTGTGTGGGATAAGGATGGTCATATTGTCACCAATTATCATGTTATTCGTGGTGCATCTGATCTCAGGTTAGTTATGAACCCTTTTCCGTGGTTTGCAGTTTTTGGGTTTAATTTTGTTTAGACTAAGAGTTAATTTATTTGTCATTTTAGTATTTGGACCTTCCTCAGCTTGTATTGATTTGTATGTTCATTACCTTGGGGGCTTTATCCATGTAATGCTGTGTTATTACTTCTAGTATGTATAGCCTGTTCATACCCATTGAAGCATCATCGAAGCACTTAATTGTAGAACCACCATGTCGCAAATGGCCCTCAGAAAATGTTTTTAGGCTTTATATTTTCAGATATGTGCAGCCACATAGGCAGAACTGTATCATATTTTTGGCTATGTGATTTTCTTTTATAATAACCTCTGGAATTATCGGTAAATATTTTCGACCAAAACAAATATGAATTATTTGTCTTGGTTATGTGGTAATTCACACAGCCATACTTTTTTTGCTATGTGAATTATCAGGAAGGAGATATCAGGGCATTATCAGTAAATATATTTGTTTTAAAATGCAGAAATTTTAAATTTTCCACCTTCCCTTGAGGTCAAAGGGGAAATTTTGGAACACTTTCAAGAACTCTACTCCAAATTTCTTGGCCTAAGACTGTCTTCAATGTTTGGATTGACAATTAGCTAATTAGTCCAGAAAACCATGGTTGTCGATTCCCCATAAAGACCAATTGGCTTTTTCTTTCTTCTGTGAGTGTTGGAGTTAGCTTGTTCGCTTCTTGGATATTCTCATATTCATAGGACAATTGCTTGGCCCTACTATATTTGGTTGTCGAGAAACTCATAGGATGTTAAGTCGTAAGTAAGTCACCATTGTTCAAACCCATTTCTTTGGAGGCTTTTTTTTTTTTTATTTTGATGCCATATATTGACCTTGAAGTCAGCCGGTGGTGGTTAGCCAAGTGGAGTTTCGATGTTTGTTTTGAGGGAAATTTGGAGTTTTATGAGTAAATTAGGCTTTCTCAAGTTTTATGTCTTTCCCAAATCAACTAGAGTGTTTTCTAAAACTCTTTTTGCCTCAGCAAAATGCAAAAGAAGGTACTATCAAGTTCTTTTATACTTACAATGAGCTAGAATTGGATTGACATTAGACTTAAGACTTAGCAGTGGCTACTTATTATTCGCATTTAATCTGGTTTTAGTTATGTACAGAGTCACTCTAGCTGACCAAACTACTTTCGATGCGAAAGTTGTTGGATTTGACCAAGACAAGGATGTTGCTGTCTTGAGTATCGATGCACCTAAAGACAAACTAAGACCTATACCTGTTGGTATATCAGCAGATTTGCTTGTTGGTCAAAAGGTGTTTGCTATTGGAAACCCTGTAAGTTTTTCTATTCATTGCCCTTTTTCCCTGGGTGTATGTGCACATTATCATATCCATTCATCTTTTATATCAAAGTTCATGCTATTGATTTCTTAAAACAAAAATGAAAAATCTAGGATGAAGCGATCTCTGGAAAGAGGATAATCTCTTAAAATGTTTTCAAAAGAGGAAAACCCCAGATTAATTTTGCGTTAAATGGACAATCCTTATATGCTATAGTTTTATCTACAAAATCAATCGGGGGAATGAACTCATTGTTTAGATTAACTAGGAAAAAAATTGTTTTAAAATTTTTGTATGTAAATCTTTTTTTGATAAAGACAACTATTTCAAAAGCTATTTTGAGTAGTTGTTAAACACTTCTATTTTTTCTAAAATGTCTTAGTTTTAAAATAAAATTCTTGAAATGTTAAACCGACCATAGTCTTAGTTGGGAGATGATCACCCCTTTTTTCATTTTCCCTGAAGCCAGTCTCTTCATTTGTTATCTTGTACATTTCCCCATTTGATGAACTAAAAATATAGTAATTTTCGTCTGTGCAGTTTGGACTGGATCATACTCTTACAACTGGTGTAATCAGGTATGAAACCCACAAGTTTTAATGGATTATATTCCTCACAAATTCTTTAGAAATTTACATTTTAATTTAGTATGTTAATCTTATACTATAATTGAGCCCCCCAAAAATTATTAGAGATTGTAATTTCAATTAACAATAATCACGAAGATGATGTTTGTTTTAGAGTTGAAATAATTCTGTTTATATATGTCTCCTTTTTACTTTTCCTAAAATTGTTTATTTTCTTCATGATCCTTCAAATGCAAAATGGGTTTATCCTTATGAGACATGTTATATTTTTACTATTTGGTTGCGGTCGAAACCTGTATTCATAGGCTTTGAAACTAGGGGTGATCATCAATGGATCGACCAGCAGACAATAGTTGGGTTTCCAGAAAATTTCGAAATTTTTTGGAAATCCAACATTCTCACTGAATTGCCTCTCTTACTCCCTCTGACCAACCAACTTGGCCGGTCATCTTGGTTTTGCGGTCTATCATGCTCACCCTATTTGAAACTGTAATACTAAACATTCAACTTGCCCTTGACAGTGGCCTTCGGAGAGAAATTAGTTCTGCGGCTACTGGTAGGCCAATTCAAGATGTCATACAGACGGATGCTGCCATTAATCCAGGAAACAGTGGAGGGCCACTTCTCGATAGTTCGGGGAACCTTATTGGAATTAATACGGCAATATATTCTCCATCTGGGGCCTCCTCTGGTGTTGGATTTTCAATTCCTGTTGACACAGTTAGTACACATGACATATAATTAACAAATTGAAGTTCCCTTAGTTTGATATTTGAAGTACATGATCCATTAACATTCTGTCAATTTAGGTGAGTGGTATTGTTGATCAGTTGGTGCGATTTGGGAAGGTGACAAGACCAATTTTAGGAATCAAGTTTGCTCCCGATCAGTCTGTCGAACAGTTGGGTGTAAGCGGAGTGCTTGTCTTAGATGCTCCTGCTAATGGTCCTGCTGGGAAAGCTGTACTCATTTCCTCTCTTTTCCTATCTGCATTCATATTCTTATATTCCTATAGGTTTCAATATTCCATTATGTTTACAAGAACTTATGAACGTCCCCCAACCTTAATACTTCGGTTCAAGAAGATCTAATCGCTTGACATTATGCAGGGCCTGCTACCGACTAAGCGCGATGCTTATGGTAGACTTATATTGGGAGACATAATAACATCAGTGAATGGCAAAAAGGTCACAAATGGAAGCGATTTGTATAGAATTCTTGACCAATGTAAAGTTGGTGATAAGGTAGCCTTCATTTCCCTGTTTGATCTTTTTACTTCAGCTTGTTTGAACTTTTTAACTTTTGAAGAAAGGCATCATACTGCTTTTATTTTAAGATGTTGGGAAGTAATTTAAAACTTTGGTTCATGCTTGAGTGGATCCATAATAAAGTTAGTAAATAGGCTGGTTTGATTGAATCTGTTGGATCCACGCACTGTTTGCCATTGTGTGCCATTGAATTCTCTGTGTCACGTAGTCATTTTTTTTTCAAAGAACTAAGAAGGATTTAAGACATGTTTGGAGATTTTGAAGTAGTCAAAATCATTTTTGTCATGTTGAAAATCACTTACAACAGTGCTAAGTTAATATAATTTAATTTTTACATTTTAAAACCCGATTTTCATACCGGGTAAAAGTAAATATTTTATCAACCTTTCTTTCTTATAGAATTATCTATGGGGTGTTTCTTCCTATAGTTTTGAAGTTTCTTATTGTATAGTATCTTAAAAGTTGAAATATCTTTTCATGTAGCATCATCGATCATGTGCCTTTTCAAAATTCATTTCACTAAATATTATAATCCGCATTTATGCATCAGTGGGAATTATTAAATGGTTCTATCCACTTGAACTAATGAATATTCTTCAAAACTTTGAGTTATGAAAAAGACAGCCAGATCCCATGTGATAAAATCCCATTGCCATCATATATATTGCCTCATAATGCTGAACAGTAGCATAGCATGTGGCTTTTAGTGACATTACACAGCCACAAAACCTTTGAATCGGCCTTTTTTTACTTGGGACAAAGAAGAACGAAGTTTTAATCCTATTTTTTTCATTAACTCCCTGCTTTCTTTTATTTTGATCCTCAAACTTTCAAAAACCGTATTTTAACTCATAAACTTTTAAGCATTCAATAAACAAGTTCCGATTACAAATATAACATTTAAACTCAAAATATTAACCGAGGTAACACATTTTCAAAGCATTTGTAGATATTGTATAGCAAACTTTAGATCCATCTCTATTACCAACAAGAGTTCTATCAACAATAGAGTTTATTACTTGTAGATTTTGTTATATTTACAATTCTTTGAACATGTTAGTGTGTGCTAAGTTGTTAACCCTAAAAGTTGTATGTAGTGGTGATGCTAAGAAAAGGAAATATTTGCATGAATCTGCGGTATAGCAGAACAGGGTATGATGATAAGTAACAATTTGTTTGATGATATAGGTAACTGTGGAGGTACTACGTGGTGATCACATGGAGAAAATTCCAGTAATTCTGGAGCCAAAGCCTGACGAATCTTGAGCCAAACATAGTTGGGGGGGTTTGTCTTGGTTTTTTCTTCTCTCTTTTTTGTACATTACATTAATCAATATTAACAAGCTGTTTGTAAATAGTCTATTCTGGCTGCCACTCTGGCCCTTTTCTCAACTAATCACACTTCAAAAGAAGATTAAATTACAAGTTTTTTAAGTTGTATTTAATAGATCCTTCAATTTTAAAAATTATAGTTTCATAAGCTTCTCCATTT ATGGCTGCTGCTGCTGCATTTTCTCTGCTGCCTTCTTCACTTTCTCGTCCTCCTAAAAGACCACCCACTTCCTTTTTTCTCTCAAAGTCCATTTCTTTTCACAATTTTTCCAATCCCACCCGCCATTTTAGATACCCCATCTTCTCTCTTCTTCACCACAACAAGAAACACTCCCAATTTTCTCCTTCAATTCTTCCAAAACTCCCCGTTCCCTCCAACCCCTTTGCTTCAATTTGCGAATCGCTTCTTGTTTTCTCCACTTCGGTGCTCTTGTCCTTTGCTCTTTTTGTAACAGATGTTGATCCGGCGGTTGCTTTTGTTGTCACTACGCCGAGGAAGTTGCAGACGGATGAGCTCGCTACAGTTCGTCTTTTTCAGGAGAATACTCCTTCTGTTGTTTATATCACGAATCTTGCTGTTAGAGTCACTCTAGCTGACCAAACTACTTTCGATGCGAAAGTTGTTGGATTTGACCAAGACAAGGATGTTGCTGTCTTGAGTATCGATGCACCTAAAGACAAACTAAGACCTATACCTGTTGGTATATCAGCAGATTTGCTTGTTGGTCAAAAGGTGTTTGCTATTGGAAACCCTTTTGGACTGGATCATACTCTTACAACTGGTGTAATCAGTGGCCTTCGGAGAGAAATTAGTTCTGCGGCTACTGGTAGGCCAATTCAAGATGTCATACAGACGGATGCTGCCATTAATCCAGGAAACAGTGGAGGGCCACTTCTCGATAGTTCGGGGAACCTTATTGGAATTAATACGGCAATATATTCTCCATCTGGGGCCTCCTCTGGTGTTGGATTTTCAATTCCTGTTGACACAGTGAGTGGTATTGTTGATCAGTTGGTGCGATTTGGGAAGGTGACAAGACCAATTTTAGGAATCAAGTTTGCTCCCGATCAGTCTGTCGAACAGTTGGGTGTAAGCGGAGTGCTTGTCTTAGATGCTCCTGCTAATGGTCCTGCTGGGAAAGCTGGCCTGCTACCGACTAAGCGCGATGCTTATGGTAGACTTATATTGGGAGACATAATAACATCAGTGAATGGCAAAAAGGTCACAAATGGAAGCGATTTGTATAGAATTCTTGACCAATGTAAAGTTGGTGATAAGGTAACTGTGGAGGTACTACGTGGTGATCACATGGAGAAAATTCCAGTAATTCTGGAGCCAAAGCCTGACGAATCTTGA MAAAAAFSLLPSSLSRPPKRPPTSFFLSKSISFHNFSNPTRHFRYPIFSLLHHNKKHSQFSPSILPKLPVPSNPFASICESLLVFSTSVLLSFALFVTDVDPAVAFVVTTPRKLQTDELATVRLFQENTPSVVYITNLAVRVTLADQTTFDAKVVGFDQDKDVAVLSIDAPKDKLRPIPVGISADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGNLIGINTAIYSPSGASSGVGFSIPVDTVSGIVDQLVRFGKVTRPILGIKFAPDQSVEQLGVSGVLVLDAPANGPAGKAGLLPTKRDAYGRLILGDIITSVNGKKVTNGSDLYRILDQCKVGDKVTVEVLRGDHMEKIPVILEPKPDES Homology
BLAST of Cucsat.G10112.T12 vs. ExPASy Swiss-Prot
Match: O22609 (Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DEGP1 PE=1 SV=2) HSP 1 Score: 526.6 bits (1355), Expect = 2.5e-148 Identity = 313/446 (70.18%), Postives = 328/446 (73.54%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. ExPASy Swiss-Prot
Match: Q9LU10 (Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DEGP8 PE=1 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 3.1e-66 Identity = 140/249 (56.22%), Postives = 174/249 (69.88%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. ExPASy Swiss-Prot
Match: Q2YMX6 (Probable periplasmic serine endoprotease DegP-like OS=Brucella abortus (strain 2308) OX=359391 GN=htrA PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.7e-43 Identity = 108/264 (40.91%), Postives = 149/264 (56.44%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. ExPASy Swiss-Prot
Match: P0C114 (Probable periplasmic serine endoprotease DegP-like OS=Brucella abortus biovar 1 (strain 9-941) OX=262698 GN=htrA PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.7e-43 Identity = 108/264 (40.91%), Postives = 149/264 (56.44%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. ExPASy Swiss-Prot
Match: Q8YG32 (Probable periplasmic serine endoprotease DegP-like OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) OX=224914 GN=htrA PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.7e-43 Identity = 108/264 (40.91%), Postives = 149/264 (56.44%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. NCBI nr
Match: XP_004142804.1 (protease Do-like 1, chloroplastic [Cucumis sativus] >KGN51390.1 hypothetical protein Csa_008466 [Cucumis sativus]) HSP 1 Score: 741 bits (1913), Expect = 3.37e-268 Identity = 398/439 (90.66%), Postives = 398/439 (90.66%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. NCBI nr
Match: XP_008458761.1 (PREDICTED: protease Do-like 1, chloroplastic isoform X1 [Cucumis melo] >KAA0037525.1 protease Do-like 1 [Cucumis melo var. makuwa] >TYK02000.1 protease Do-like 1 [Cucumis melo var. makuwa]) HSP 1 Score: 723 bits (1867), Expect = 3.43e-261 Identity = 390/439 (88.84%), Postives = 392/439 (89.29%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. NCBI nr
Match: XP_038890591.1 (protease Do-like 1, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 686 bits (1770), Expect = 2.11e-246 Identity = 371/428 (86.68%), Postives = 375/428 (87.62%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. NCBI nr
Match: XP_023515810.1 (protease Do-like 1, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 665 bits (1717), Expect = 2.67e-238 Identity = 364/441 (82.54%), Postives = 373/441 (84.58%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. NCBI nr
Match: XP_022922573.1 (protease Do-like 1, chloroplastic [Cucurbita moschata] >KAG6602439.1 Protease Do-like 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 664 bits (1714), Expect = 7.64e-238 Identity = 364/441 (82.54%), Postives = 372/441 (84.35%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. ExPASy TrEMBL
Match: A0A0A0KP41 (PDZ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G524830 PE=3 SV=1) HSP 1 Score: 741 bits (1913), Expect = 1.63e-268 Identity = 398/439 (90.66%), Postives = 398/439 (90.66%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. ExPASy TrEMBL
Match: A0A5A7T7V2 (Protease Do-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G001140 PE=3 SV=1) HSP 1 Score: 723 bits (1867), Expect = 1.66e-261 Identity = 390/439 (88.84%), Postives = 392/439 (89.29%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. ExPASy TrEMBL
Match: A0A1S3C962 (protease Do-like 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498072 PE=3 SV=1) HSP 1 Score: 723 bits (1867), Expect = 1.66e-261 Identity = 390/439 (88.84%), Postives = 392/439 (89.29%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. ExPASy TrEMBL
Match: A0A6J1JTP9 (protease Do-like 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487418 PE=3 SV=1) HSP 1 Score: 664 bits (1714), Expect = 3.70e-238 Identity = 364/441 (82.54%), Postives = 373/441 (84.58%), Query Frame = 0
BLAST of Cucsat.G10112.T12 vs. ExPASy TrEMBL
Match: A0A6J1E723 (protease Do-like 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430538 PE=3 SV=1) HSP 1 Score: 664 bits (1714), Expect = 3.70e-238 Identity = 364/441 (82.54%), Postives = 372/441 (84.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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