Csor.00g305580.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g305580.m01
TypemRNA
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionCCT domain-containing protein
LocationCsor_Chr18: 12985232 .. 12986803 (-)
Sequence length801
RNA-Seq ExpressionCsor.00g305580.m01
SyntenyCsor.00g305580.m01
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGGGAAGGAGATCTGTTTGAAGCCCCACAACCACAGCCATTTGTTGAAGACACTTTCATAGGTCTTGATCCTGTGATGGCAGCCATTTCAATGATGTCTTGTGCTGAAGAAGTCATCTCTCCTGAAGGACTAAAAGTTGCAGACTTTCAATCGCTTCAAAATGACCAGCTGCTAAATGAGGTATATTATGAGTGTGAAAAGGATCTCTTGGAAAAAGCTGCATTAGAAAGACCACTGCCTGAAGCCCTGAACATTGATATTCCAGTACTGTACCCAGAAGAAAATCAAATTCCGGAAAACAAGCCACTCCCTGATGTCTCGATCCAGAAAAGTACCAGCTCGGGGGGGTTAAGCTCAATGGATTTGTTGAAAGAACCTACCGTCAAGCCAAGTTTAATAGATTTCCCTGGCATGGATTTCAGTTCTGTTTATGGGATGAGGAGAGCATTTAGTGAAGGAGATATCAAGGTAAGACATGTTACAACAATGGTCAGTTGTTTCTAGGCTTTGGACTTGATAGATCTTTAATTTTTTGTTTTTTTTTTTTTTTTTGGGCTGCAGACACTCGGCAATGACAAGATAGGCATGATCCATTCTTCCTTCCAACGACCCTTGTTCAGCAATTGTATCAACGAGGAACGCCTAGAAAAGCTTTACCGATACAGGAACAAGAAGACAAAGAGGAATTTTGGGAGAAAGATCAAGGTAAAAAGAAAACAGAATGTTACCTTTCATTTCAAATCATCAGAAACTTATCAAAGCCCTTTCAGGAGCTCCCACTCTAGGCCTGTATGCATGTAATCCCCACCCAAACCCCCCGTTAGTAGATATTGTCTTCGTTGCGCTTTCCCTTTCAGGTTTTCCTTAAGGTTTTCAAAACGCGTATGCTAAGCAGAGGTTTCCACATCCTTATTAAGAATGTTTCGTTCTCCTTCCCAACCAACGTGGGATCTCACAATCTACCCTCCTTCTGCCCAGTGTCCTCACTGACACTCATTCCTTTCTCCAATCGATGTGGGACCCCCCCAATCCACCCCCTTCGTGTCCACCTCCTTTTGGGGTCTAGCCTCCTCGTTGGCACACCGCTTCGTGTCCATCTCCCTTCGGAGCTTAGCCTCCTCGTTGGCACATCGTTGATGCCTGGCTGTGATACTATTCATAACGGCCCAAGCCCACCGCTAGCAGATATGTTCTCTTTGGGCTTTCCCTCCAAGTTTTTTAAACACATCTGCTAGAGAGAAGTTTCCACACCCTTATAAAGATTGTTTCGTTCTCCTTACCAACAACTAAGTTGTGGGATCTTACACACATATTCTTGCATATACAGTATCTAATCTTGGTGAATTGTTGTTCATAAATTTCATTGTATGGTCTGGTTTTCAGTATGCTTGTAGGAAGGCTCTTGCAGACAGTCAACCTAGGATCCGTGGAAGGTTTGCGAAGACGGACGAAACTGAAGTGTCAAGGGCAGTAGCTCACTCTCAATGCTGTTTCTATGAGAAAAATAAGAATGAAAAGCAATATAGGCATGAGAAGCTTGTTGTGAAGATGAGGTGGGAGAGTTGA

mRNA sequence

ATGGGTGGGGAAGGAGATCTGTTTGAAGCCCCACAACCACAGCCATTTGTTGAAGACACTTTCATAGGTCTTGATCCTGTGATGGCAGCCATTTCAATGATGTCTTGTGCTGAAGAAGTCATCTCTCCTGAAGGACTAAAAGTTGCAGACTTTCAATCGCTTCAAAATGACCAGCTGCTAAATGAGGTATATTATGAGTGTGAAAAGGATCTCTTGGAAAAAGCTGCATTAGAAAGACCACTGCCTGAAGCCCTGAACATTGATATTCCAGTACTGTACCCAGAAGAAAATCAAATTCCGGAAAACAAGCCACTCCCTGATGTCTCGATCCAGAAAAGTACCAGCTCGGGGGGGTTAAGCTCAATGGATTTGTTGAAAGAACCTACCGTCAAGCCAAGTTTAATAGATTTCCCTGGCATGGATTTCAGTTCTGTTTATGGGATGAGGAGAGCATTTAGTGAAGGAGATATCAAGACACTCGGCAATGACAAGATAGGCATGATCCATTCTTCCTTCCAACGACCCTTGTTCAGCAATTGTATCAACGAGGAACGCCTAGAAAAGCTTTACCGATACAGGAACAAGAAGACAAAGAGGAATTTTGGGAGAAAGATCAAGTATGCTTGTAGGAAGGCTCTTGCAGACAGTCAACCTAGGATCCGTGGAAGGTTTGCGAAGACGGACGAAACTGAAGTGTCAAGGGCAGTAGCTCACTCTCAATGCTGTTTCTATGAGAAAAATAAGAATGAAAAGCAATATAGGCATGAGAAGCTTGTTGTGAAGATGAGGTGGGAGAGTTGA

Coding sequence (CDS)

ATGGGTGGGGAAGGAGATCTGTTTGAAGCCCCACAACCACAGCCATTTGTTGAAGACACTTTCATAGGTCTTGATCCTGTGATGGCAGCCATTTCAATGATGTCTTGTGCTGAAGAAGTCATCTCTCCTGAAGGACTAAAAGTTGCAGACTTTCAATCGCTTCAAAATGACCAGCTGCTAAATGAGGTATATTATGAGTGTGAAAAGGATCTCTTGGAAAAAGCTGCATTAGAAAGACCACTGCCTGAAGCCCTGAACATTGATATTCCAGTACTGTACCCAGAAGAAAATCAAATTCCGGAAAACAAGCCACTCCCTGATGTCTCGATCCAGAAAAGTACCAGCTCGGGGGGGTTAAGCTCAATGGATTTGTTGAAAGAACCTACCGTCAAGCCAAGTTTAATAGATTTCCCTGGCATGGATTTCAGTTCTGTTTATGGGATGAGGAGAGCATTTAGTGAAGGAGATATCAAGACACTCGGCAATGACAAGATAGGCATGATCCATTCTTCCTTCCAACGACCCTTGTTCAGCAATTGTATCAACGAGGAACGCCTAGAAAAGCTTTACCGATACAGGAACAAGAAGACAAAGAGGAATTTTGGGAGAAAGATCAAGTATGCTTGTAGGAAGGCTCTTGCAGACAGTCAACCTAGGATCCGTGGAAGGTTTGCGAAGACGGACGAAACTGAAGTGTCAAGGGCAGTAGCTCACTCTCAATGCTGTTTCTATGAGAAAAATAAGAATGAAAAGCAATATAGGCATGAGAAGCTTGTTGTGAAGATGAGGTGGGAGAGTTGA

Protein sequence

MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLLNEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLSSMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNCINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQCCFYEKNKNEKQYRHEKLVVKMRWES
Homology
[Close]
BLAST of Csor.00g305580.m01 vs. ExPASy Swiss-Prot
Match: O82117 (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-07
Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = 0 

Query: 115 SSGGLSSMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQR 174
           S G   SM  L+  +  P   D    D ++ Y +R + S  D+ T         HS    
Sbjct: 204 SLGHSVSMSSLENMSTVP---DCGVPDITTSY-LRSSKSTIDLFTAAAGSPVAAHSIMSP 263

Query: 175 PLFSNCINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 233
           P F   I+ E   +++RYR K+  R F + I+YA RKA A+++PRI+GRFAK  +T++
Sbjct: 264 PQFMGAIDRE--ARVHRYREKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKRSDTDL 315

[Close]
BLAST of Csor.00g305580.m01 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 7.1e-06
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 0 

Query: 184 ERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETE--------VSRA 241
           +R  ++ RYR K+  R F + I+YA RKA A+S+PRI+GRFAK  ETE        V  +
Sbjct: 284 DREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYAS 343

[Close]
BLAST of Csor.00g305580.m01 vs. ExPASy Swiss-Prot
Match: Q96502 (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05
Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 0 

Query: 184 ERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETE 232
           ER  ++ RYR KK  R F + I+YA RKA A+ +PRI+GRFAK  ETE
Sbjct: 277 EREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETE 324

[Close]
BLAST of Csor.00g305580.m01 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 2.1e-05
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 184 ERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAK-TDETEVSRAVAH 239
           ER  ++ RYR K+  R F + I+YA RKA A+ +PRI+GRFAK TD  E +  V H
Sbjct: 294 EREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGH 349

[Close]
BLAST of Csor.00g305580.m01 vs. ExPASy Swiss-Prot
Match: E5RQA1 (Transcription factor GHD7 OS=Oryza sativa subsp. japonica OX=39947 GN=GHD7 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.5e-05
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 184 ERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETE 232
           ER  KL RY+ K+ KR + ++I+YA RKA A+ +PR+RGRFAK  + E
Sbjct: 189 EREAKLMRYKEKRKKRCYEKQIRYASRKAYAEMRPRVRGRFAKEPDQE 236

[Close]
BLAST of Csor.00g305580.m01 vs. NCBI nr
Match: KAG6574240.1 (Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013306.1 Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 530 bits (1366), Expect = 6.08e-190
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS
Sbjct: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC
Sbjct: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ 240
           INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ
Sbjct: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ 240

Query: 241 CCFYEKNKNEKQYRHEKLVVKMRWES 266
           CCFYEKNKNEKQYRHEKLVVKMRWES
Sbjct: 241 CCFYEKNKNEKQYRHEKLVVKMRWES 266

[Close]
BLAST of Csor.00g305580.m01 vs. NCBI nr
Match: XP_022945268.1 (uncharacterized protein LOC111449566 [Cucurbita moschata])

HSP 1 Score: 525 bits (1353), Expect = 2.83e-187
Identity = 264/266 (99.25%), Postives = 265/266 (99.62%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC
Sbjct: 164 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ 240
           INEERLEKLY +RNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ
Sbjct: 224 INEERLEKLYIHRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ 283

Query: 241 CCFYEKNKNEKQYRHEKLVVKMRWES 266
           CCFYEKNKNEKQYRHEKLVVKMRWES
Sbjct: 284 CCFYEKNKNEKQYRHEKLVVKMRWES 309

[Close]
BLAST of Csor.00g305580.m01 vs. NCBI nr
Match: XP_023541455.1 (putative zinc finger protein CONSTANS-LIKE 11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459 bits (1182), Expect = 1.39e-161
Identity = 230/232 (99.14%), Postives = 232/232 (100.00%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDLLKEPT+KPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC
Sbjct: 164 SMDLLKEPTIKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 232
           INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDE+EV
Sbjct: 224 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDESEV 275

[Close]
BLAST of Csor.00g305580.m01 vs. NCBI nr
Match: XP_022968160.1 (putative zinc finger protein CONSTANS-LIKE 11 [Cucurbita maxima])

HSP 1 Score: 455 bits (1170), Expect = 9.36e-160
Identity = 228/232 (98.28%), Postives = 230/232 (99.14%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVEDTFIGL PVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MGGEGDLFEAPQPQPFVEDTFIGLHPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPE+LNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPESLNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDLLKEPT+KPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRP FSNC
Sbjct: 164 SMDLLKEPTIKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPSFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 232
           INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV
Sbjct: 224 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 275

[Close]
BLAST of Csor.00g305580.m01 vs. NCBI nr
Match: KAG6576657.1 (Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014707.1 Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404 bits (1038), Expect = 1.18e-139
Identity = 200/232 (86.21%), Postives = 217/232 (93.53%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVE+TF+GLDPVMAAISM+SCAEEVISPEGL+VADFQSLQNDQLL
Sbjct: 44  MGGEGDLFEAPQPQPFVEETFMGLDPVMAAISMISCAEEVISPEGLEVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLP+ LNI+IPVL P++NQIPENKP PD SIQKS+SSG L+
Sbjct: 104 NEVYYECEKDLLEKAALERPLPDVLNIEIPVLNPKDNQIPENKPFPDASIQKSSSSGCLN 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDL + PT+KP  IDFP MDFSSVYGMRRAFSEGDIKTLG+DKIGMIHS   RP+FSNC
Sbjct: 164 SMDLAQGPTIKPCFIDFPDMDFSSVYGMRRAFSEGDIKTLGSDKIGMIHSPLHRPVFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 232
            +EERLEKL RYRNK+TKRNFGRKIKYACRKALADSQPRIRGRFAKTDE+EV
Sbjct: 224 TSEERLEKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFAKTDESEV 275

[Close]
BLAST of Csor.00g305580.m01 vs. ExPASy TrEMBL
Match: A0A6J1G0C2 (uncharacterized protein LOC111449566 OS=Cucurbita moschata OX=3662 GN=LOC111449566 PE=4 SV=1)

HSP 1 Score: 525 bits (1353), Expect = 1.37e-187
Identity = 264/266 (99.25%), Postives = 265/266 (99.62%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC
Sbjct: 164 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ 240
           INEERLEKLY +RNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ
Sbjct: 224 INEERLEKLYIHRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEVSRAVAHSQ 283

Query: 241 CCFYEKNKNEKQYRHEKLVVKMRWES 266
           CCFYEKNKNEKQYRHEKLVVKMRWES
Sbjct: 284 CCFYEKNKNEKQYRHEKLVVKMRWES 309

[Close]
BLAST of Csor.00g305580.m01 vs. ExPASy TrEMBL
Match: A0A6J1HWG4 (putative zinc finger protein CONSTANS-LIKE 11 OS=Cucurbita maxima OX=3661 GN=LOC111467478 PE=4 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 4.53e-160
Identity = 228/232 (98.28%), Postives = 230/232 (99.14%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVEDTFIGL PVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MGGEGDLFEAPQPQPFVEDTFIGLHPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPE+LNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPESLNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDLLKEPT+KPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRP FSNC
Sbjct: 164 SMDLLKEPTIKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPSFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 232
           INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV
Sbjct: 224 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 275

[Close]
BLAST of Csor.00g305580.m01 vs. ExPASy TrEMBL
Match: A0A5A7UAD4 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003670 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 4.78e-138
Identity = 200/232 (86.21%), Postives = 214/232 (92.24%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           M GEGDLFEAPQPQP++++TFIGLDPVMAAISM+SCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 1   MVGEGDLFEAPQPQPYIDETFIGLDPVMAAISMISCAEEVISPEGLKVADFQSLQNDQLL 60

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPE LNI+IPVL PEENQIPENKP  D SIQKSTS   LS
Sbjct: 61  NEVYYECEKDLLEKAALERPLPEDLNIEIPVLNPEENQIPENKPFLDASIQKSTSLECLS 120

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDL++ PT+KPS IDF  MDFSSVYGMRRAFSEGDIKTLG+DK+GMIHS   RP+FSNC
Sbjct: 121 SMDLMQGPTIKPSFIDFSDMDFSSVYGMRRAFSEGDIKTLGSDKLGMIHSPLHRPVFSNC 180

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 232
            +EERLEKL RYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDE+EV
Sbjct: 181 TSEERLEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDESEV 232

[Close]
BLAST of Csor.00g305580.m01 vs. ExPASy TrEMBL
Match: A0A6J1E5A1 (uncharacterized protein LOC111430881 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430881 PE=4 SV=1)

HSP 1 Score: 399 bits (1024), Expect = 7.70e-138
Identity = 198/232 (85.34%), Postives = 215/232 (92.67%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           MGGEGDLFEAPQPQPFVE+TF+GLDPVMAAISM+SCAEEVISPEGL+VADFQSLQNDQLL
Sbjct: 44  MGGEGDLFEAPQPQPFVEETFMGLDPVMAAISMISCAEEVISPEGLEVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLP+ LNI+IPVL PE+NQIPENK  PD SIQKS+S G L+
Sbjct: 104 NEVYYECEKDLLEKAALERPLPDVLNIEIPVLNPEDNQIPENKSFPDASIQKSSSLGCLN 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDL++ PT+KP  IDFP MDFSSVYGMRRAFSEGDIKTLG+DKIGMIHS   RP+FSNC
Sbjct: 164 SMDLVQGPTIKPCFIDFPDMDFSSVYGMRRAFSEGDIKTLGSDKIGMIHSPLHRPVFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 232
            +EERLEKL RYR K+TKRNFGRKIKYACRKALADSQPRIRGRFAKTDE+EV
Sbjct: 224 TSEERLEKLSRYRTKRTKRNFGRKIKYACRKALADSQPRIRGRFAKTDESEV 275

[Close]
BLAST of Csor.00g305580.m01 vs. ExPASy TrEMBL
Match: A0A1S3CS26 (uncharacterized protein LOC103504133 OS=Cucumis melo OX=3656 GN=LOC103504133 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 2.20e-137
Identity = 200/232 (86.21%), Postives = 214/232 (92.24%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQNDQLL 60
           M GEGDLFEAPQPQP++++TFIGLDPVMAAISM+SCAEEVISPEGLKVADFQSLQNDQLL
Sbjct: 44  MVGEGDLFEAPQPQPYIDETFIGLDPVMAAISMISCAEEVISPEGLKVADFQSLQNDQLL 103

Query: 61  NEVYYECEKDLLEKAALERPLPEALNIDIPVLYPEENQIPENKPLPDVSIQKSTSSGGLS 120
           NEVYYECEKDLLEKAALERPLPE LNI+IPVL PEENQIPENKP  D SIQKSTS   LS
Sbjct: 104 NEVYYECEKDLLEKAALERPLPEDLNIEIPVLNPEENQIPENKPFLDASIQKSTSLECLS 163

Query: 121 SMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLFSNC 180
           SMDL++ PT+KPS IDF  MDFSSVYGMRRAFSEGDIKTLG+DK+GMIHS   RP+FSNC
Sbjct: 164 SMDLMQGPTIKPSFIDFSDMDFSSVYGMRRAFSEGDIKTLGSDKLGMIHSPLHRPVFSNC 223

Query: 181 INEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETEV 232
            +EERLEKL RYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDE+EV
Sbjct: 224 TSEERLEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDESEV 275

[Close]
BLAST of Csor.00g305580.m01 vs. TAIR 10
Match: AT4G27900.1 (CCT motif family protein )

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-48
Identity = 115/234 (49.15%), Postives = 155/234 (66.24%), Query Frame = 0 

Query: 2   GGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQND-QLL 61
           G E DLF+A  P+P +E+  + +DP              +S E +++ D  SLQ+D QL+
Sbjct: 48  GEESDLFKA--PEPIIEEPMLAVDP--------------LSQELVELGDLGSLQSDQQLI 107

Query: 62  NEVYYECEKDLLEKAALERPLPEALNI-DIPVLYPEENQIPENK-PLPDVSIQKSTSSGG 121
           ++ +Y+CE+DLL K+A+E PL E L+I +I ++   +N +      + DV I KS SSG 
Sbjct: 108 DKAFYDCEQDLLVKSAMESPLSEVLDIKNISLVAKMDNDVKSTSVVVSDVPIPKSVSSGN 167

Query: 122 LSSMDLLK-EPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLF 181
           LSSMD+++ +  V     DFP +D    YGMRRAFSE DI+TLG    G++ S   R + 
Sbjct: 168 LSSMDMVEHKDAVIQGFPDFPPVD----YGMRRAFSESDIQTLGTGNTGLVQSQLDRIII 227

Query: 182 SNCINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETE 232
           S C +E+R EKL RYRNKK+KRNFGRKIKYACRKALADSQPRIRGRFAKT+E +
Sbjct: 228 S-CTSEDRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEEMQ 260

[Close]
BLAST of Csor.00g305580.m01 vs. TAIR 10
Match: AT4G27900.2 (CCT motif family protein )

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-48
Identity = 115/234 (49.15%), Postives = 155/234 (66.24%), Query Frame = 0 

Query: 2   GGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGLKVADFQSLQND-QLL 61
           G E DLF+A  P+P +E+  + +DP              +S E +++ D  SLQ+D QL+
Sbjct: 48  GEESDLFKA--PEPIIEEPMLAVDP--------------LSQELVELGDLGSLQSDQQLI 107

Query: 62  NEVYYECEKDLLEKAALERPLPEALNI-DIPVLYPEENQIPENK-PLPDVSIQKSTSSGG 121
           ++ +Y+CE+DLL K+A+E PL E L+I +I ++   +N +      + DV I KS SSG 
Sbjct: 108 DKAFYDCEQDLLVKSAMESPLSEVLDIKNISLVAKMDNDVKSTSVVVSDVPIPKSVSSGN 167

Query: 122 LSSMDLLK-EPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLF 181
           LSSMD+++ +  V     DFP +D    YGMRRAFSE DI+TLG    G++ S   R + 
Sbjct: 168 LSSMDMVEHKDAVIQGFPDFPPVD----YGMRRAFSESDIQTLGTGNTGLVQSQLDRIII 227

Query: 182 SNCINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDETE 232
           S C +E+R EKL RYRNKK+KRNFGRKIKYACRKALADSQPRIRGRFAKT+E +
Sbjct: 228 S-CTSEDRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEEMQ 260

[Close]
BLAST of Csor.00g305580.m01 vs. TAIR 10
Match: AT5G53420.1 (CCT motif family protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.0e-47
Identity = 116/232 (50.00%), Postives = 157/232 (67.67%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGL-KVADFQSLQN-DQ 60
           +G E DLF A  P P +E+  + +DP+ AA++M+SC E+  + +GL ++ D  SLQ+  Q
Sbjct: 50  IGEESDLFRA--PDPILEEPILTVDPLSAALTMISCGED--TSQGLCELPDLGSLQSGQQ 109

Query: 61  LLNEVYYECEKDLLEKAALERPLPEALNI-DIPVLYPEENQIPENKPLPDVSIQKSTSSG 120
           LL++ +YECE+DL+ K+A+E P  + L+I +I V+      I EN+      +QKS SSG
Sbjct: 110 LLDKAFYECEQDLMMKSAMESPFSDVLDIKNISVV----TTINENQ-----DMQKSVSSG 169

Query: 121 GLSSMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGNDKIGMIHSSFQRPLF 180
            LSSMD          + +FP  DF   YGMRRAFSEGDI+ LG    G++ S   R + 
Sbjct: 170 NLSSMDWSHAQQETVMIQNFPDFDFG--YGMRRAFSEGDIQKLG---AGLVQSPLDRIIV 229

Query: 181 SNCINEERLEKLYRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTDE 230
           S C +E+R EKL RY+NKK++RNFGRKIKYACRKALADSQPR+RGRFAKT+E
Sbjct: 230 S-CTSEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 262

[Close]
BLAST of Csor.00g305580.m01 vs. TAIR 10
Match: AT5G53420.2 (CCT motif family protein )

HSP 1 Score: 163.7 bits (413), Expect = 2.0e-40
Identity = 103/200 (51.50%), Postives = 136/200 (68.00%), Query Frame = 0 

Query: 33  MMSCAEEVISPEGL-KVADFQSLQN-DQLLNEVYYECEKDLLEKAALERPLPEALNI-DI 92
           M+SC E+  + +GL ++ D  SLQ+  QLL++ +YECE+DL+ K+A+E P  + L+I +I
Sbjct: 1   MISCGED--TSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMMKSAMESPFSDVLDIKNI 60

Query: 93  PVLYPEENQIPENKPLPDVSIQKSTSSGGLSSMDLLKEPTVKPSLIDFPGMDFSSVYGMR 152
            V+      I EN+      +QKS SSG LSSMD          + +FP  DF   YGMR
Sbjct: 61  SVV----TTINENQ-----DMQKSVSSGNLSSMDWSHAQQETVMIQNFPDFDFG--YGMR 120

Query: 153 RAFSEGDIKTLGNDKIGMIHSSFQRPLFSNCINEERLEKLYRYRNKKTKRNFGRKIKYAC 212
           RAFSEGDI+ LG    G++ S   R + S C +E+R EKL RY+NKK++RNFGRKIKYAC
Sbjct: 121 RAFSEGDIQKLG---AGLVQSPLDRIIVS-CTSEDRREKLSRYKNKKSRRNFGRKIKYAC 180

Query: 213 RKALADSQPRIRGRFAKTDE 230
           RKALADSQPR+RGRFAKT+E
Sbjct: 181 RKALADSQPRVRGRFAKTEE 183

[Close]
BLAST of Csor.00g305580.m01 vs. TAIR 10
Match: AT5G53420.3 (CCT motif family protein )

HSP 1 Score: 105.9 bits (263), Expect = 5.0e-23
Identity = 71/165 (43.03%), Postives = 102/165 (61.82%), Query Frame = 0 

Query: 1   MGGEGDLFEAPQPQPFVEDTFIGLDPVMAAISMMSCAEEVISPEGL-KVADFQSLQN-DQ 60
           +G E DLF A  P P +E+  + +DP+ AA++M+SC E+  + +GL ++ D  SLQ+  Q
Sbjct: 50  IGEESDLFRA--PDPILEEPILTVDPLSAALTMISCGED--TSQGLCELPDLGSLQSGQQ 109

Query: 61  LLNEVYYECEKDLLEKAALERPLPEALNI-DIPVLYPEENQIPENKPLPDVSIQKSTSSG 120
           LL++ +YECE+DL+ K+A+E P  + L+I +I V+      I EN+      +QKS SSG
Sbjct: 110 LLDKAFYECEQDLMMKSAMESPFSDVLDIKNISVV----TTINENQ-----DMQKSVSSG 169

Query: 121 GLSSMDLLKEPTVKPSLIDFPGMDFSSVYGMRRAFSEGDIKTLGN 163
            LSSMD          + +FP  DF   YGMRRAFSEGDI+   N
Sbjct: 170 NLSSMDWSHAQQETVMIQNFPDFDFG--YGMRRAFSEGDIQVWQN 199

The following BLAST results are available for this feature:
BLAST of Csor.00g305580.m01 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O821172.2e-0734.75Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=... [more]
Q9FHH87.1e-0646.15Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2... [more]
Q965021.6e-0556.25Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1... [more]
Q940T92.1e-0550.00Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2... [more]
E5RQA13.5e-0552.08Transcription factor GHD7 OS=Oryza sativa subsp. japonica OX=39947 GN=GHD7 PE=1 ... [more]
BLAST of Csor.00g305580.m01 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6574240.16.08e-190100.00Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. sororia] >KAG701... [more]
XP_022945268.12.83e-18799.25uncharacterized protein LOC111449566 [Cucurbita moschata][more]
XP_023541455.11.39e-16199.14putative zinc finger protein CONSTANS-LIKE 11 [Cucurbita pepo subsp. pepo][more]
XP_022968160.19.36e-16098.28putative zinc finger protein CONSTANS-LIKE 11 [Cucurbita maxima][more]
KAG6576657.11.18e-13986.21Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. soro... [more]
BLAST of Csor.00g305580.m01 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G0C21.37e-18799.25uncharacterized protein LOC111449566 OS=Cucurbita moschata OX=3662 GN=LOC1114495... [more]
A0A6J1HWG44.53e-16098.28putative zinc finger protein CONSTANS-LIKE 11 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A5A7UAD44.78e-13886.21Putative zinc finger protein CONSTANS-LIKE 11 OS=Cucumis melo var. makuwa OX=119... [more]
A0A6J1E5A17.70e-13885.34uncharacterized protein LOC111430881 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A1S3CS262.20e-13786.21uncharacterized protein LOC103504133 OS=Cucumis melo OX=3656 GN=LOC103504133 PE=... [more]
BLAST of Csor.00g305580.m01 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G27900.11.2e-4849.15CCT motif family protein [more]
AT4G27900.21.2e-4849.15CCT motif family protein [more]
AT5G53420.11.0e-4750.00CCT motif family protein [more]
AT5G53420.22.0e-4051.50CCT motif family protein [more]
AT5G53420.35.0e-2343.03CCT motif family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 185..227
e-value: 1.6E-16
score: 60.1
IPR010402CCT domainPROSITEPS51017CCTcoord: 185..227
score: 14.832434
NoneNo IPR availablePANTHERPTHR31717:SF2CCT MOTIF FAMILY PROTEINcoord: 1..233
NoneNo IPR availablePANTHERPTHR31717ZINC FINGER PROTEIN CONSTANS-LIKE 10coord: 1..233

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csor.00g305580Csor.00g305580gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g305580.m01.CDS01Csor.00g305580.m01.CDS01CDS
Csor.00g305580.m01.CDS02Csor.00g305580.m01.CDS02CDS
Csor.00g305580.m01.CDS03Csor.00g305580.m01.CDS03CDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g305580.m01.stop_codon01Csor.00g305580.m01.stop_codon01stop_codon


The following terminal feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g305580.m01.terminal01Csor.00g305580.m01.terminal01terminal


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g305580.m01.intron01Csor.00g305580.m01.intron01intron
Csor.00g305580.m01.intron02Csor.00g305580.m01.intron02intron


The following internal feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g305580.m01.internal01Csor.00g305580.m01.internal01internal


The following initial feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g305580.m01.initial01Csor.00g305580.m01.initial01initial


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g305580.m01.start_codon01Csor.00g305580.m01.start_codon01start_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csor.00g305580.m01Csor.00g305580.m01-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding