Csor.00g281720.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g281720.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	embryo-specific protein ATS3B-like
Location	Csor_Chr16: 749886 .. 751287 (-)
Sequence length	834
RNA-Seq Expression	Csor.00g281720.m01
Synteny	Csor.00g281720.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGGTCCTCGTCGCCTCCTCTGTCGTTGCTACTGCTGCTCTCTGCCCTTGCCGTCGTCTGCTCCGCTGTCGAGCCGCCTCAGATCACCGTGAAGCCCGACGTTGCTCCCGAGTCCCTCCCGATTAACTACATCCAGGTCCGTGTTTCAACTCTCTTTACTCTCAACCGTCGCTTTTGTATTTTTCCTTCAAATTTTGCGTAATATACTTCTCTTTTTCTTTCGTGTTGCGAAGGAAGTTGGAAGCTGTTCTTACGAGGTTACAGTAGCAACAAGCTGTTCATCTCCTTCATTTATCACTGACGAAATCGGTGTGTTGTTTGGAGATTCTCATGGAAATCAGGTGTTCTTTCTTTTCTGTCATTCTCCTTTTTAAAATTATTAACTCTAGGGTTTTTACTTTTATTTACCTATTTCTGAAATTAATTCCCCTGAATCCAAACAAGAGTATGGATTTTGCTTCTAATCTTACGCCAGGATGATTCTGGCCTGAATAATAAACTTCATTATTATTATTTTTTTGTTGATCAACCACTTATCAACTCTAGGTGTTCTTTCTTTTCTGTCATTTTCCCTTTTAAAATTATTAACTCTCGGGTTTTTACTTTTATTTACCTATTTCTGAAATTACTTCCCCTGAATCCGAACAAGAGTATGGATTTTGCCTCTAATCTTACGCCAGGATGATTCTGGCCTGAATAATAAACTTCATTAATATTATTATTTTGTTAATCAAGCTCTTAATATATGATCTGATCCACGGATTTTTGTTTTGTTTTGTTTTGATTGAATGCTTCACATGTGTAACAAATAGATTGTGGAGAAGAAGCTGAGCAATGGAGACAAGGTGTTTGATAGTTGTAATACAGATAGGTTTGTTCTAAACGATCGACCCTGCAGTGTCCAAATCAGTTATATGTATATCTATAAAGACGGAGCTGACGATTGGCTTCCGAACTCTGTTGAAATCTCTGGCTCTGGAATCAAACCCCTTCTGTTCATCTTCAAATCCTCCATCCCAAGCAACACTTGGTTTGGTTTTGATTTACGCCAATATCCTTTTCTATCGCCGCCGTCCTACAACCCGTACCCTCCTTTTCCATCGTTGTCTCCTCCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTCTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGTCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTTTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCATCGCCTCCTCCTCCTCCTCCACCATCATCCTCCAGCAAAATCTCTGGTCTGAAATTGGCTAAGGTATCTGTGGTTTTGGGATTGCTGTTTGCTCTTCTGTGA

mRNA sequence

ATGGAGAGGTCCTCGTCGCCTCCTCTGTCGTTGCTACTGCTGCTCTCTGCCCTTGCCGTCGTCTGCTCCGCTGTCGAGCCGCCTCAGATCACCGTGAAGCCCGACGTTGCTCCCGAGTCCCTCCCGATTAACTACATCCAGGAAGTTGGAAGCTGTTCTTACGAGGTTACAGTAGCAACAAGCTGTTCATCTCCTTCATTTATCACTGACGAAATCGGTGTGTTGTTTGGAGATTCTCATGGAAATCAGATTGTGGAGAAGAAGCTGAGCAATGGAGACAAGGTGTTTGATAGTTGTAATACAGATAGGTTTGTTCTAAACGATCGACCCTGCAGTGTCCAAATCAGTTATATGTATATCTATAAAGACGGAGCTGACGATTGGCTTCCGAACTCTGTTGAAATCTCTGGCTCTGGAATCAAACCCCTTCTGTTCATCTTCAAATCCTCCATCCCAAGCAACACTTGGTTTGGTTTTGATTTACGCCAATATCCTTTTCTATCGCCGCCGTCCTACAACCCGTACCCTCCTTTTCCATCGTTGTCTCCTCCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTCTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGTCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTTTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCATCGCCTCCTCCTCCTCCTCCACCATCATCCTCCAGCAAAATCTCTGGTCTGAAATTGGCTAAGGTATCTGTGGTTTTGGGATTGCTGTTTGCTCTTCTGTGA

Coding sequence (CDS)

ATGGAGAGGTCCTCGTCGCCTCCTCTGTCGTTGCTACTGCTGCTCTCTGCCCTTGCCGTCGTCTGCTCCGCTGTCGAGCCGCCTCAGATCACCGTGAAGCCCGACGTTGCTCCCGAGTCCCTCCCGATTAACTACATCCAGGAAGTTGGAAGCTGTTCTTACGAGGTTACAGTAGCAACAAGCTGTTCATCTCCTTCATTTATCACTGACGAAATCGGTGTGTTGTTTGGAGATTCTCATGGAAATCAGATTGTGGAGAAGAAGCTGAGCAATGGAGACAAGGTGTTTGATAGTTGTAATACAGATAGGTTTGTTCTAAACGATCGACCCTGCAGTGTCCAAATCAGTTATATGTATATCTATAAAGACGGAGCTGACGATTGGCTTCCGAACTCTGTTGAAATCTCTGGCTCTGGAATCAAACCCCTTCTGTTCATCTTCAAATCCTCCATCCCAAGCAACACTTGGTTTGGTTTTGATTTACGCCAATATCCTTTTCTATCGCCGCCGTCCTACAACCCGTACCCTCCTTTTCCATCGTTGTCTCCTCCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTCTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGTCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTTTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCATCGCCTCCTCCTCCTCCTCCACCATCATCCTCCAGCAAAATCTCTGGTCTGAAATTGGCTAAGGTATCTGTGGTTTTGGGATTGCTGTTTGCTCTTCTGTGA

Protein sequence

MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVATSCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYIYKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPSLSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKPVLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL

Homology

[Close]

BLAST of Csor.00g281720.m01 vs. ExPASy Swiss-Prot
Match: Q681K2 (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.6e-22
Identity = 45/133 (33.83%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 30  ITVKPDVAPESLPINYIQEVGSCSYEVTVATSCSSPSFITDEIGVLFGDSHGNQIVEKKL 89
           IT KP      +P   ++   +CSY V + TSCSS S+  D+I + FGD +GN++  K+L
Sbjct: 26  ITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRL 85

Query: 90  SN-GDKVFDSCNTDRFVLNDRPCSVQISYMYIYKDGADDWLPNSVEISGSGIKPLLFIFK 149
            +   + F+ C++D + ++  PC   + Y+Y+ + G+D W P +V+I GS I+ + F + 
Sbjct: 86  DDPSSRTFEKCSSDTYKISG-PCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYN 145

Query: 150 SSIPSNTWFGFDL 162
             +P++ W+GF++
Sbjct: 146 LFLPNSVWYGFNV 157

[Close]

BLAST of Csor.00g281720.m01 vs. ExPASy Swiss-Prot
Match: Q9LYP6 (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16
Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = 0


Query: 50  GSCSYEVTVATSCSSPSFITDEIGVLFGDSHGNQIVEKKLS---NGDKVFDSCNTDRFVL 109
           G+C Y V V TSC SP    D+I ++FGD+ GN++   KL     G      C+T+ F +
Sbjct: 32  GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 91

Query: 110 NDRPCSVQISYMYIYKDGADDWLPNSVEISGSGIKPLLFIFKSSIPS-NTWFGFD----- 169
             +  +  I  +YI ++G D W+P S+EI   G K + F F  S+P  NTW+G +     
Sbjct: 92  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 151

Query: 170 -LRQYPFLSPPSYNP-YPPFPSLSPPPPPPPP 191
                P L PP + P +PP    +PPPPPP P
Sbjct: 152 GRPSSPDLPPPHFPPEFPPETPTTPPPPPPRP 183

[Close]

BLAST of Csor.00g281720.m01 vs. NCBI nr
Match: KAG6576767.1 (Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 488 bits (1257), Expect = 5.84e-173
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60
           MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 277
           VLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL
Sbjct: 241 VLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 277

[Close]

BLAST of Csor.00g281720.m01 vs. NCBI nr
Match: XP_022923120.1 (embryo-specific protein ATS3B-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 473 bits (1216), Expect = 9.25e-167
Identity = 271/277 (97.83%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60
           MERSSSPPL LLLLLSALAVVCSAVEPPQITVKPDVAPESL INYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKP+LFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 277
           VLP   PPPPPPSSSSKISGLKLAKVSVVLGLLFALL
Sbjct: 241 VLP---PPPPPPSSSSKISGLKLAKVSVVLGLLFALL 274

[Close]

BLAST of Csor.00g281720.m01 vs. NCBI nr
Match: XP_022923119.1 (embryo-specific protein ATS3B-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 470 bits (1210), Expect = 1.40e-165
Identity = 273/291 (93.81%), Postives = 274/291 (94.16%), Query Frame = 0


Query: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60
           MERSSSPPL LLLLLSALAVVCSAVEPPQITVKPDVAPESL INYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKP+LFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPSPPPPPP--------------PSSSSKISGLKLAKVSVVLGLLFALL 277
           VLPP PPPPPP              PSSSSKISGLKLAKVSVVLGLLFALL
Sbjct: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 291

[Close]

BLAST of Csor.00g281720.m01 vs. NCBI nr
Match: XP_023551787.1 (embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 461 bits (1185), Expect = 4.88e-162
Identity = 267/277 (96.39%), Postives = 270/277 (97.47%), Query Frame = 0


Query: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60
           MERSSSPPL LLLLLS+LAVV SAV+PPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSSLAVVYSAVDPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQI+YMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQINYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKPLLFIFKSSIP NTWFGFDLRQYPF SPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPRNTWFGFDLRQYPFPSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPP HPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPP-HPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 277
           VLPP  PPPPPPSSSSKISGLKLAKVSVVLGLLFALL
Sbjct: 241 VLPP--PPPPPPSSSSKISGLKLAKVSVVLGLLFALL 274

[Close]

BLAST of Csor.00g281720.m01 vs. NCBI nr
Match: KAG6576773.1 (Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 438 bits (1126), Expect = 1.72e-153
Identity = 246/277 (88.81%), Postives = 246/277 (88.81%), Query Frame = 0


Query: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60
           MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPP                               HPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPP-------------------------------HPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 277
           VLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL
Sbjct: 241 VLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 246

[Close]

BLAST of Csor.00g281720.m01 vs. ExPASy TrEMBL
Match: A0A6J1EAT0 (embryo-specific protein ATS3B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430882 PE=4 SV=1)

HSP 1 Score: 473 bits (1216), Expect = 4.48e-167
Identity = 271/277 (97.83%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60
           MERSSSPPL LLLLLSALAVVCSAVEPPQITVKPDVAPESL INYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKP+LFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 277
           VLP   PPPPPPSSSSKISGLKLAKVSVVLGLLFALL
Sbjct: 241 VLP---PPPPPPSSSSKISGLKLAKVSVVLGLLFALL 274

[Close]

BLAST of Csor.00g281720.m01 vs. ExPASy TrEMBL
Match: A0A6J1E5F7 (embryo-specific protein ATS3B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430882 PE=4 SV=1)

HSP 1 Score: 470 bits (1210), Expect = 6.80e-166
Identity = 273/291 (93.81%), Postives = 274/291 (94.16%), Query Frame = 0


Query: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60
           MERSSSPPL LLLLLSALAVVCSAVEPPQITVKPDVAPESL INYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKP+LFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPSPPPPPP--------------PSSSSKISGLKLAKVSVVLGLLFALL 277
           VLPP PPPPPP              PSSSSKISGLKLAKVSVVLGLLFALL
Sbjct: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 291

[Close]

BLAST of Csor.00g281720.m01 vs. ExPASy TrEMBL
Match: A0A6J1E5Y4 (embryo-specific protein ATS3B-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430882 PE=4 SV=1)

HSP 1 Score: 432 bits (1111), Expect = 3.08e-151
Identity = 253/282 (89.72%), Postives = 254/282 (90.07%), Query Frame = 0


Query: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60
           MERSSSPPL LLLLLSALAVVCSAVEPPQITVKPDVAPESL INYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKP+LFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPP----HPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPP 240
           LSPPPPPPPP    HPLPPPPEPI SPPPPPKPVLPPP PPPPP                
Sbjct: 181 LSPPPPPPPPPPPPHPLPPPPEPIFSPPPPPKPVLPPPPPPPPP---------------- 240

Query: 241 PPKPVLPPSPPPPPPP-SSSSKISGLKLAKVSVVLGLLFALL 277
             KPVLPP PPPPPPP SSSSKISGLKLAKVSVVLGLLFALL
Sbjct: 241 --KPVLPPPPPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 264

[Close]

BLAST of Csor.00g281720.m01 vs. ExPASy TrEMBL
Match: A0A6J1E5A6 (embryo-specific protein ATS3B-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111430882 PE=4 SV=1)

HSP 1 Score: 427 bits (1097), Expect = 2.26e-149
Identity = 244/277 (88.09%), Postives = 245/277 (88.45%), Query Frame = 0


Query: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60
           MERSSSPPL LLLLLSALAVVCSAVEPPQITVKPDVAPESL INYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKP+LFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPP                           PPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPP---------------------------PPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 277
           VLP   PPPPPPSSSSKISGLKLAKVSVVLGLLFALL
Sbjct: 241 VLP---PPPPPPSSSSKISGLKLAKVSVVLGLLFALL 247

[Close]

BLAST of Csor.00g281720.m01 vs. ExPASy TrEMBL
Match: A0A6J1JAH7 (embryo-specific protein ATS3B-like OS=Cucurbita maxima OX=3661 GN=LOC111482743 PE=4 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 4.63e-142
Identity = 235/277 (84.84%), Postives = 238/277 (85.92%), Query Frame = 0


Query: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60
           MERSSSPPL LLLLLS+LAVVCSAVEPPQITVKPD+AP+SLPINYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSSLAVVCSAVEPPQITVKPDIAPQSLPINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKPLLFI KSSIP N WFGFDLRQYPF SPPSYNP PPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPLLFILKSSIPRNNWFGFDLRQYPFPSPPSYNPSPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPP                           PPP HPLPPPPEPI  PPPPPKP
Sbjct: 181 LSPPPPPPPP---------------------------PPPHHPLPPPPEPILPPPPPPKP 240

Query: 241 VLPPSPPPPPPPSSSSKISGLKLAKVSVVLGLLFALL 277
           VLP   PPPPPPSSSSKISGLKLAKVSVVLGLLFALL
Sbjct: 241 VLP---PPPPPPSSSSKISGLKLAKVSVVLGLLFALL 247

[Close]

BLAST of Csor.00g281720.m01 vs. TAIR 10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 105.5 bits (262), Expect = 6.8e-23
Identity = 45/133 (33.83%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 30  ITVKPDVAPESLPINYIQEVGSCSYEVTVATSCSSPSFITDEIGVLFGDSHGNQIVEKKL 89
           IT KP      +P   ++   +CSY V + TSCSS S+  D+I + FGD +GN++  K+L
Sbjct: 26  ITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRL 85

Query: 90  SN-GDKVFDSCNTDRFVLNDRPCSVQISYMYIYKDGADDWLPNSVEISGSGIKPLLFIFK 149
            +   + F+ C++D + ++  PC   + Y+Y+ + G+D W P +V+I GS I+ + F + 
Sbjct: 86  DDPSSRTFEKCSSDTYKISG-PCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYN 145

Query: 150 SSIPSNTWFGFDL 162
             +P++ W+GF++
Sbjct: 146 LFLPNSVWYGFNV 157

[Close]

BLAST of Csor.00g281720.m01 vs. TAIR 10
Match: AT5G62210.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 89.0 bits (219), Expect = 6.6e-18
Identity = 77/203 (37.93%), Postives = 106/203 (52.22%), Query Frame = 0


Query: 10  SLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVATSCSSPSFIT 69
           S+LLLL    V+C     P +T +P ++   L      E  SC Y V V TSC SP +  
Sbjct: 7   SILLLL----VLCFTHPIPSLTFEPLISSLDL-----HEEESCPYTVIVTTSCFSPDWSR 66

Query: 70  DEIGVLFGDSHGNQIVEKKLS---NGDKVFDSCNTDRFVLNDRPCSVQISYMYIYKDGAD 129
           D++ +  GD+  NQ+V  +L    +G   F+ C++D F +  + C   I  +YIY+ G D
Sbjct: 67  DQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVKGK-CLNTICSVYIYRSGTD 126

Query: 130 DWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPSLSPPPP 189
            W+P +VEI   G K + F F  ++P N W+G +      L PPS    P FP  SP  P
Sbjct: 127 GWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCNNTDLPPPS----PDFPPFSPSIP 186

Query: 190 PPPPHPLPPPPEPILSPPPPPKP 210
           PP P   PP P P + PPPPP P
Sbjct: 187 PPSPPYFPPEP-PSIPPPPPPSP 194

[Close]

BLAST of Csor.00g281720.m01 vs. TAIR 10
Match: AT5G07190.1 (seed gene 3 )

HSP 1 Score: 88.6 bits (218), Expect = 8.7e-18
Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = 0


Query: 50  GSCSYEVTVATSCSSPSFITDEIGVLFGDSHGNQIVEKKLS---NGDKVFDSCNTDRFVL 109
           G+C Y V V TSC SP    D+I ++FGD+ GN++   KL     G      C+T+ F +
Sbjct: 32  GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 91

Query: 110 NDRPCSVQISYMYIYKDGADDWLPNSVEISGSGIKPLLFIFKSSIPS-NTWFGFD----- 169
             +  +  I  +YI ++G D W+P S+EI   G K + F F  S+P  NTW+G +     
Sbjct: 92  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 151

Query: 170 -LRQYPFLSPPSYNP-YPPFPSLSPPPPPPPP 191
                P L PP + P +PP    +PPPPPP P
Sbjct: 152 GRPSSPDLPPPHFPPEFPPETPTTPPPPPPRP 183

[Close]

BLAST of Csor.00g281720.m01 vs. TAIR 10
Match: AT5G07190.2 (seed gene 3 )

HSP 1 Score: 88.6 bits (218), Expect = 8.7e-18
Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = 0


Query: 50  GSCSYEVTVATSCSSPSFITDEIGVLFGDSHGNQIVEKKLS---NGDKVFDSCNTDRFVL 109
           G+C Y V V TSC SP    D+I ++FGD+ GN++   KL     G      C+T+ F +
Sbjct: 4   GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 63

Query: 110 NDRPCSVQISYMYIYKDGADDWLPNSVEISGSGIKPLLFIFKSSIPS-NTWFGFD----- 169
             +  +  I  +YI ++G D W+P S+EI   G K + F F  S+P  NTW+G +     
Sbjct: 64  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 123

Query: 170 -LRQYPFLSPPSYNP-YPPFPSLSPPPPPPPP 191
                P L PP + P +PP    +PPPPPP P
Sbjct: 124 GRPSSPDLPPPHFPPEFPPETPTTPPPPPPRP 155

The following BLAST results are available for this feature:

BLAST of Csor.00g281720.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q681K2	9.6e-22	33.83	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]
Q9LYP6	1.2e-16	37.50	Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1	[more]

BLAST of Csor.00g281720.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576767.1	5.84e-173	100.00	Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022923120.1	9.25e-167	97.83	embryo-specific protein ATS3B-like isoform X2 [Cucurbita moschata]	[more]
XP_022923119.1	1.40e-165	93.81	embryo-specific protein ATS3B-like isoform X1 [Cucurbita moschata]	[more]
XP_023551787.1	4.88e-162	96.39	embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo]	[more]
KAG6576773.1	1.72e-153	88.81	Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Csor.00g281720.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAT0	4.48e-167	97.83	embryo-specific protein ATS3B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1E5F7	6.80e-166	93.81	embryo-specific protein ATS3B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1E5Y4	3.08e-151	89.72	embryo-specific protein ATS3B-like isoform X3 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1E5A6	2.26e-149	88.09	embryo-specific protein ATS3B-like isoform X4 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JAH7	4.63e-142	84.84	embryo-specific protein ATS3B-like OS=Cucurbita maxima OX=3661 GN=LOC111482743 P...	[more]

BLAST of Csor.00g281720.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41475.1	6.8e-23	33.83	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	6.6e-18	37.93	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	8.7e-18	37.50	seed gene 3	[more]
AT5G07190.2	8.7e-18	37.50	seed gene 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 26..38 score: 36.92 coord: 163..179 score: 38.82 coord: 182..199 score: 46.67 coord: 205..230 score: 46.15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..262
None	No IPR available	PANTHER	PTHR31718:SF32	EMBRYO-SPECIFIC PROTEIN ATS3B	coord: 11..169
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 11..169
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 48..160 e-value: 4.1E-31 score: 107.5
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 49..158

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g281720	Csor.00g281720	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g281720.m01.CDS03	Csor.00g281720.m01.CDS03	CDS
Csor.00g281720.m01.CDS02	Csor.00g281720.m01.CDS02	CDS
Csor.00g281720.m01.CDS01	Csor.00g281720.m01.CDS01	CDS

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g281720.m01.terminal01	Csor.00g281720.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g281720.m01.stop_codon01	Csor.00g281720.m01.stop_codon01	stop_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g281720.m01.intron02	Csor.00g281720.m01.intron02	intron
Csor.00g281720.m01.intron01	Csor.00g281720.m01.intron01	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g281720.m01.internal01	Csor.00g281720.m01.internal01	internal

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g281720.m01.initial01	Csor.00g281720.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g281720.m01.start_codon01	Csor.00g281720.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g281720.m01	Csor.00g281720.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding