Csor.00g277920.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g277920.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Auxin-responsive protein
Location	Csor_Chr19: 9294835 .. 9295104 (-)
Sequence length	270
RNA-Seq Expression	Csor.00g277920.m01
Synteny	Csor.00g277920.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACTTCTTCAGCTTCTTCGACGACCGTCAACCTCAACGAAGGAAGGAGTTACAGTAGTTCCAAAGGGCTACTGTGCGGTCTATGTTGGAGAGATCCAAAAGAAGCGTTTTGTCATCCCTGTAACTTACTTGAACCAACCATGTTTTCAAGACTTGCTTAGTCAAGCTGAACAAGAATTTGGTTATTATCACCCTATGGGTGGCCTTACCATTCAGTGCAGAGAAGATATCTTCACCAATCTCATTTCTCAGTTAAATAGGCCATGA

mRNA sequence

ATGAGACTTCTTCAGCTTCTTCGACGACCGTCAACCTCAACGAAGGAAGGAGTTACAGTAGTTCCAAAGGGCTACTGTGCGGTCTATGTTGGAGAGATCCAAAAGAAGCGTTTTGTCATCCCTGTAACTTACTTGAACCAACCATGTTTTCAAGACTTGCTTAGTCAAGCTGAACAAGAATTTGGTTATTATCACCCTATGGGTGGCCTTACCATTCAGTGCAGAGAAGATATCTTCACCAATCTCATTTCTCAGTTAAATAGGCCATGA

Coding sequence (CDS)

ATGAGACTTCTTCAGCTTCTTCGACGACCGTCAACCTCAACGAAGGAAGGAGTTACAGTAGTTCCAAAGGGCTACTGTGCGGTCTATGTTGGAGAGATCCAAAAGAAGCGTTTTGTCATCCCTGTAACTTACTTGAACCAACCATGTTTTCAAGACTTGCTTAGTCAAGCTGAACAAGAATTTGGTTATTATCACCCTATGGGTGGCCTTACCATTCAGTGCAGAGAAGATATCTTCACCAATCTCATTTCTCAGTTAAATAGGCCATGA

Protein sequence

MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQEFGYYHPMGGLTIQCREDIFTNLISQLNRP

Homology

[Close]

BLAST of Csor.00g277920.m01 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.0e-22
Identity = 52/80 (65.00%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 8  RRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQEFGYYHPM 67
          R P           PKGY AVYVGE + KRFVIPV+YLNQP FQDLLSQAE+EFGY HPM
Sbjct: 4  RLPGIRKASKAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPM 63

Query: 68 GGLTIQCREDIFTNLISQLN 88
          GGLTI C ED+F  + S LN
Sbjct: 64 GGLTIPCSEDVFQCITSCLN 82

[Close]

BLAST of Csor.00g277920.m01 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-21
Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 2  RLLQLLRRPSTSTKEGVTV---VPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAE 61
          R+  ++RR S  T +  +    VPKGY AVYVG+ + +RF IPV+YLN+P FQ+LLSQAE
Sbjct: 4  RIAGIVRRTSFYTTQAASKRVDVPKGYAAVYVGD-KMRRFTIPVSYLNEPSFQELLSQAE 63

Query: 62 QEFGYYHPMGGLTIQCREDIFTNLISQLN 88
          +EFGY HPMGGLTI C+E+ F N+ + LN
Sbjct: 64 EEFGYDHPMGGLTIPCKEEEFLNVTAHLN 91

[Close]

BLAST of Csor.00g277920.m01 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-21
Identity = 46/87 (52.87%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          +R L + ++  + +   V+  PKG+ AVYVGE QKKR+++P++YLNQP FQ LLS++E+E
Sbjct: 4  VRSLLVAKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 63

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLN 88
          FG+ HPMGGLTI C ED F N+ S+L+
Sbjct: 64 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Csor.00g277920.m01 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-21
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 11 STSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQEFGYYHPMGGL 70
          S ST  G +  PKG+ AVYVGE QKKR+++PV+YLNQP FQ LLS++E+EFG+ HPMGGL
Sbjct: 15 SRSTGAG-SAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGL 74

Query: 71 TIQCREDIFTNLISQL 87
          TI C ED F N+ S+L
Sbjct: 75 TIPCPEDTFINVTSRL 89

[Close]

BLAST of Csor.00g277920.m01 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.6e-21
Identity = 46/84 (54.76%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 5  QLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQEFGYY 64
          ++L R +T+     +  PKG+ AVYVGE QKKR+++P++YLNQP FQ LLS++E+EFG+ 
Sbjct: 12 KILSRSTTA----ASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFD 71

Query: 65 HPMGGLTIQCREDIFTNLISQLNR 89
          HPMGGLTI C ED F N+ S+  R
Sbjct: 72 HPMGGLTIPCPEDTFINVTSRFQR 91

[Close]

BLAST of Csor.00g277920.m01 vs. NCBI nr
Match: KAG6572089.1 (Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187 bits (475), Expect = 7.00e-60
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE
Sbjct: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 89
          FGYYHPMGGLTIQCREDIFTNLISQLNRP
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 89

[Close]

BLAST of Csor.00g277920.m01 vs. NCBI nr
Match: KGN43209.1 (hypothetical protein Csa_020258 [Cucumis sativus])

HSP 1 Score: 176 bits (447), Expect = 1.31e-55
Identity = 83/89 (93.26%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          MR+LQLLRR STSTKEGV VVPKGYCAVYVGEIQKKRFVIP+TYLNQPCFQ LLSQAE+E
Sbjct: 1  MRILQLLRRASTSTKEGVAVVPKGYCAVYVGEIQKKRFVIPITYLNQPCFQILLSQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 89
          FGYYHPMGGLTIQCREDIFTNLISQLNRP
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 89

[Close]

BLAST of Csor.00g277920.m01 vs. NCBI nr
Match: XP_016900447.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0049702.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa] >TYK12170.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (420), Expect = 1.58e-51
Identity = 81/89 (91.01%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          MR+LQLLRR S   KEGV VVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQ LLSQAE+E
Sbjct: 1  MRILQLLRRAS---KEGVAVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQVLLSQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 89
          FGYYHPMGGLTIQCREDIFTNLISQLNRP
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 86

[Close]

BLAST of Csor.00g277920.m01 vs. NCBI nr
Match: XP_022136192.1 (auxin-responsive protein SAUR24-like [Momordica charantia])

HSP 1 Score: 139 bits (349), Expect = 1.01e-40
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          M L QLL+R      +GV+ VPKGYCAVYVGE QKKRFVIP++YLNQPCFQ+LL QAE+E
Sbjct: 1  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLN 87
          FGYYHPMGGLTI CR+DIFT+LIS+LN
Sbjct: 61 FGYYHPMGGLTIHCRDDIFTDLISRLN 82

[Close]

BLAST of Csor.00g277920.m01 vs. NCBI nr
Match: XP_011658582.1 (auxin-responsive protein SAUR24 [Cucumis sativus])

HSP 1 Score: 135 bits (341), Expect = 1.68e-39
Identity = 61/87 (70.11%), Postives = 75/87 (86.21%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          MRL+ LL+R      +GV+ +PKGYCAVYVGE QKKRF+IP++YLNQPCFQ+LLSQ E+E
Sbjct: 1  MRLIHLLKR-----SQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLN 87
          FGY+HPMGGLTI C++ IFTNLIS+LN
Sbjct: 61 FGYHHPMGGLTIHCKDAIFTNLISRLN 82

[Close]

BLAST of Csor.00g277920.m01 vs. ExPASy TrEMBL
Match: A0A0A0K2F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009050 PE=3 SV=1)

HSP 1 Score: 176 bits (447), Expect = 6.36e-56
Identity = 83/89 (93.26%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          MR+LQLLRR STSTKEGV VVPKGYCAVYVGEIQKKRFVIP+TYLNQPCFQ LLSQAE+E
Sbjct: 1  MRILQLLRRASTSTKEGVAVVPKGYCAVYVGEIQKKRFVIPITYLNQPCFQILLSQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 89
          FGYYHPMGGLTIQCREDIFTNLISQLNRP
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 89

[Close]

BLAST of Csor.00g277920.m01 vs. ExPASy TrEMBL
Match: A0A5D3CL76 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001100 PE=3 SV=1)

HSP 1 Score: 166 bits (420), Expect = 7.66e-52
Identity = 81/89 (91.01%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          MR+LQLLRR S   KEGV VVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQ LLSQAE+E
Sbjct: 1  MRILQLLRRAS---KEGVAVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQVLLSQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 89
          FGYYHPMGGLTIQCREDIFTNLISQLNRP
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 86

[Close]

BLAST of Csor.00g277920.m01 vs. ExPASy TrEMBL
Match: A0A1S4DWU0 (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC107990908 PE=3 SV=1)

HSP 1 Score: 166 bits (420), Expect = 7.66e-52
Identity = 81/89 (91.01%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          MR+LQLLRR S   KEGV VVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQ LLSQAE+E
Sbjct: 1  MRILQLLRRAS---KEGVAVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQVLLSQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 89
          FGYYHPMGGLTIQCREDIFTNLISQLNRP
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQLNRP 86

[Close]

BLAST of Csor.00g277920.m01 vs. ExPASy TrEMBL
Match: A0A6J1C4W2 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007947 PE=3 SV=1)

HSP 1 Score: 139 bits (349), Expect = 4.90e-41
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          M L QLL+R      +GV+ VPKGYCAVYVGE QKKRFVIP++YLNQPCFQ+LL QAE+E
Sbjct: 1  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLN 87
          FGYYHPMGGLTI CR+DIFT+LIS+LN
Sbjct: 61 FGYYHPMGGLTIHCRDDIFTDLISRLN 82

[Close]

BLAST of Csor.00g277920.m01 vs. ExPASy TrEMBL
Match: A0A0A0K4K1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1)

HSP 1 Score: 136 bits (342), Expect = 5.73e-40
Identity = 63/87 (72.41%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          MRL  LL+R      +GV+ VPKGYCAVYVGE QKKRFVIP+TYLN+PCFQ LL Q E+E
Sbjct: 1  MRLQHLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPITYLNRPCFQQLLCQTEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLN 87
          FGYYHPMGGLTI CR+DIFT+LIS +N
Sbjct: 61 FGYYHPMGGLTIHCRDDIFTDLISNMN 82

[Close]

BLAST of Csor.00g277920.m01 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 2.9e-23
Identity = 49/86 (56.98%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 2  RLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQEF 61
          ++L+  +  S+S+      VPKGY AVYVGE   KRFV+PV+YL+QP FQDLL +AE+EF
Sbjct: 14 QILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRKAEEEF 73

Query: 62 GYYHPMGGLTIQCREDIFTNLISQLN 88
          G+ HPMGGLTI C E+IF +L S+ N
Sbjct: 74 GFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Csor.00g277920.m01 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-22
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 11 STSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQEFGYYHPMGGL 70
          S ST  G +  PKG+ AVYVGE QKKR+++PV+YLNQP FQ LLS++E+EFG+ HPMGGL
Sbjct: 15 SRSTGAG-SAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGL 74

Query: 71 TIQCREDIFTNLISQL 87
          TI C ED F N+ S+L
Sbjct: 75 TIPCPEDTFINVTSRL 89

[Close]

BLAST of Csor.00g277920.m01 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-22
Identity = 46/87 (52.87%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60
          +R L + ++  + +   V+  PKG+ AVYVGE QKKR+++P++YLNQP FQ LLS++E+E
Sbjct: 4  VRSLLVAKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 63

Query: 61 FGYYHPMGGLTIQCREDIFTNLISQLN 88
          FG+ HPMGGLTI C ED F N+ S+L+
Sbjct: 64 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Csor.00g277920.m01 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-22
Identity = 50/84 (59.52%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 5  QLLRRPSTSTKEGVTVVPKGYCAVYVGE-IQKKRFVIPVTYLNQPCFQDLLSQAEQEFGY 64
          QLL+  S S+      +PKG+ AVYVGE +QK+RFV+PVTYL+ PCFQ LL +AE+EFG+
Sbjct: 14 QLLKSLSHSSNN--VAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFGF 73

Query: 65 YHPMGGLTIQCREDIFTNLISQLN 88
           HPMGGLTI C E IF +L S+L+
Sbjct: 74 DHPMGGLTIPCTEQIFIDLASRLS 95

[Close]

BLAST of Csor.00g277920.m01 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-22
Identity = 46/84 (54.76%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 5  QLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQEFGYY 64
          ++L R +T+     +  PKG+ AVYVGE QKKR+++P++YLNQP FQ LLS++E+EFG+ 
Sbjct: 12 KILSRSTTA----ASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFD 71

Query: 65 HPMGGLTIQCREDIFTNLISQLNR 89
          HPMGGLTI C ED F N+ S+  R
Sbjct: 72 HPMGGLTIPCPEDTFINVTSRFQR 91

The following BLAST results are available for this feature:

BLAST of Csor.00g277920.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33081	4.0e-22	65.00	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33079	2.0e-21	56.18	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9FJF6	2.0e-21	52.87	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
Q9FK62	2.0e-21	63.16	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	2.6e-21	54.76	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]

BLAST of Csor.00g277920.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572089.1	7.00e-60	100.00	Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KGN43209.1	1.31e-55	93.26	hypothetical protein Csa_020258 [Cucumis sativus]	[more]
XP_016900447.1	1.58e-51	91.01	PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0049702.1 auxin-ind...	[more]
XP_022136192.1	1.01e-40	74.71	auxin-responsive protein SAUR24-like [Momordica charantia]	[more]
XP_011658582.1	1.68e-39	70.11	auxin-responsive protein SAUR24 [Cucumis sativus]	[more]

BLAST of Csor.00g277920.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2F9	6.36e-56	93.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009050 PE=3 SV=1	[more]
A0A5D3CL76	7.66e-52	91.01	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4DWU0	7.66e-52	91.01	auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC107990908 PE=3 SV=1	[more]
A0A6J1C4W2	4.90e-41	74.71	auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A0A0K4K1	5.73e-40	72.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1	[more]

BLAST of Csor.00g277920.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	2.9e-23	56.98	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.4e-22	63.16	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.4e-22	52.87	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.9e-22	59.52	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	1.9e-22	54.76	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..84 e-value: 2.2E-23 score: 82.2
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 20..87
None	No IPR available	PANTHER	PTHR31929:SF80	SUBFAMILY NOT NAMED	coord: 20..87

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g277920	Csor.00g277920	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g277920.m01.CDS01	Csor.00g277920.m01.CDS01	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g277920.m01.stop_codon01	Csor.00g277920.m01.stop_codon01	stop_codon

The following single feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g277920.m01.single01	Csor.00g277920.m01.single01	single

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g277920.m01.start_codon01	Csor.00g277920.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g277920.m01	Csor.00g277920.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin