Csor.00g231190.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g231190.m01
TypemRNA
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionCASP-like protein
LocationCsor_Chr08: 4509871 .. 4511593 (-)
Sequence length651
RNA-Seq ExpressionCsor.00g231190.m01
SyntenyCsor.00g231190.m01
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGGTGACCGGAAAATGTCGTCTGTGCCGGAGGGAGCGGTGCAGCTACCGGAGATGACGAAGGTGGCGGCTATGGCGTCCAAGAGCGGCACGATTGGTGGACTGATTGAACCGTCGGACCGAAGCTTAGACTGCCTGAGAGCTGATTTGTGTCAGTTGATGCTGAGGCTGATTTGTGTTGCTACGTCGGTGACGGCAATGTCGTTGATGGTTACGGCGGCGGAGTCTAGCACGGTTTCCATTTACGGATTTGAACTTCCCGTTCATTCCAAGTGGTCGTTCTCGGACGTATTCGAGTAAGTTTCGTCGTTTGTTTTGTTGGTGCTTAATGCCTTAGAGGTTTTGGTGATTTGAATCTGTGATTGGCTTGTAAGAAAGGAAGAACCGTGAGATCCATCAGTTGAAACGTGACTGCTCTGTGGAGGAATGGCGGTCCTCTGTAACTATATCACTGCTGTAACTTATAATTTCTTGTTTGTCTCTCTTCATCGTTTGTTCTCCTTCAATCTTTTATTGGAATGCTTCAGATATTCATCCAAGGAGAGGAGAGGAGAGGAGAAAATTGGAGGGCTAAGGATTGGACGGTGTTTTCTGTCTGCTTTTGGGGGAAACATTTTACTGCATTTTCATTTTGTTTCTTACTGAGATTTCTTCGCATCCAAACGGAATGTCATCTATTTTTTCCTTTCGTTCCCGATCACTTTTGATTTCATTATTACTGGTTTGCCTACTTTGGTAAAGGCCACATTAAATCTTATGGTTGATTCAGTCGTTTTTCCTCTGTTTGGATGCTGACAAACCTGCCTTTCTTCGAATGGAGAAAATGGAATCTGGAAAATCCTCCTCATCCAAGTTTTAGGGCTTCGTCTAAATGTAATGAACAGAATTGAACCCGTGAACCCAATTTCTTCTTTCCTCAAAATATTCCCTATTTCATGTTTGTCTTCTTCTGGACCGGTTGATGACTATCTATACAAAATTTTAACCAACTGCCTTCCGCATAATTTCTTCGTCTTTCTTTATTATTCTTATTGCTTCAATGGTGCCACAGATCACTGTGTTGATTATTTTTTAAAGGATAATAAAACAAAGAGTTTGTTGCATTTGCTTAGACTTGTGTTATTATAAAAATGAATTACGTGTTGAATCAAACAGAAATTGGACTGTGGGGTTTTTGTTCTAATGAGTTGAAATTCTTTGAACCCCGTGAGTTTTTGGCGAGTGTAGGTATCTTGTTGGAGTTTCAGGGGCTGTCGCTGCCTACTCTTTGCTGCAGCTTCTCGTTACTACTTCCAAGCTTGTCAGGAAGTCCCCAGTGCTTGGCTCCAGAAGTCAAGCCTGGCTTATTTTCGCTGTTGATCTGGTAAGGGAAATAGTAGCATATTGATTATAATTTCTGGAAGAAATGTTCTTGAGACTAGACTAGACGGTTGTTTTATGCGATTCATGAAAGGGAGTGTACTATTAGGACTGTTTTTTCAAGAATTTGTTGTGTGGGTCGCAGGCCTTGGCATATGCACTGATGAGTGCTGGATCAGCTGCAGCTGGGATCTCAAATCTGAACCGCACTGGCATTCGGCACACAACTCTGCCTAACTTTTGTAAGCCATTACAACGCTTTTGTAACCACGTTGCCATATCTATTGCCTTCACATTCTTTACCTGCTGCTTGCTCACCACTTCTGCTATCCAATATGTTATTTGGCTCTCCAAAAACTGA

mRNA sequence

ATGACTGGTGACCGGAAAATGTCGTCTGTGCCGGAGGGAGCGGTGCAGCTACCGGAGATGACGAAGGTGGCGGCTATGGCGTCCAAGAGCGGCACGATTGGTGGACTGATTGAACCGTCGGACCGAAGCTTAGACTGCCTGAGAGCTGATTTGTGTCAGTTGATGCTGAGGCTGATTTGTGTTGCTACGTCGGTGACGGCAATGTCGTTGATGGTTACGGCGGCGGAGTCTAGCACGGTTTCCATTTACGGATTTGAACTTCCCGTTCATTCCAAGTGGTCGTTCTCGGACGTATTCGAGTATCTTGTTGGAGTTTCAGGGGCTGTCGCTGCCTACTCTTTGCTGCAGCTTCTCGTTACTACTTCCAAGCTTGTCAGGAAGTCCCCAGTGCTTGGCTCCAGAAGTCAAGCCTGGCTTATTTTCGCTGTTGATCTGGCCTTGGCATATGCACTGATGAGTGCTGGATCAGCTGCAGCTGGGATCTCAAATCTGAACCGCACTGGCATTCGGCACACAACTCTGCCTAACTTTTGTAAGCCATTACAACGCTTTTGTAACCACGTTGCCATATCTATTGCCTTCACATTCTTTACCTGCTGCTTGCTCACCACTTCTGCTATCCAATATGTTATTTGGCTCTCCAAAAACTGA

Coding sequence (CDS)

ATGACTGGTGACCGGAAAATGTCGTCTGTGCCGGAGGGAGCGGTGCAGCTACCGGAGATGACGAAGGTGGCGGCTATGGCGTCCAAGAGCGGCACGATTGGTGGACTGATTGAACCGTCGGACCGAAGCTTAGACTGCCTGAGAGCTGATTTGTGTCAGTTGATGCTGAGGCTGATTTGTGTTGCTACGTCGGTGACGGCAATGTCGTTGATGGTTACGGCGGCGGAGTCTAGCACGGTTTCCATTTACGGATTTGAACTTCCCGTTCATTCCAAGTGGTCGTTCTCGGACGTATTCGAGTATCTTGTTGGAGTTTCAGGGGCTGTCGCTGCCTACTCTTTGCTGCAGCTTCTCGTTACTACTTCCAAGCTTGTCAGGAAGTCCCCAGTGCTTGGCTCCAGAAGTCAAGCCTGGCTTATTTTCGCTGTTGATCTGGCCTTGGCATATGCACTGATGAGTGCTGGATCAGCTGCAGCTGGGATCTCAAATCTGAACCGCACTGGCATTCGGCACACAACTCTGCCTAACTTTTGTAAGCCATTACAACGCTTTTGTAACCACGTTGCCATATCTATTGCCTTCACATTCTTTACCTGCTGCTTGCTCACCACTTCTGCTATCCAATATGTTATTTGGCTCTCCAAAAACTGA

Protein sequence

MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLICVATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVTTSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKPLQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN
Homology
[Close]
BLAST of Csor.00g231190.m01 vs. ExPASy Swiss-Prot
Match: A7P756 (CASP-like protein 3A1 OS=Vitis vinifera OX=29760 GN=VIT_09s0002g03780 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.6e-62
Identity = 130/211 (61.61%), Postives = 168/211 (79.62%), Query Frame = 0 

Query: 7   MSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEP--SDRSLDCLRADLCQLMLRLICVATS 66
           + + PE  +QLPE    A +A+++GT+ G + P  SDRS+     D+  ++LR +C+ TS
Sbjct: 4   LKTPPEIGIQLPE----AKVAAETGTMSGPLVPPRSDRSVR-RGTDVAHVVLRFVCLLTS 63

Query: 67  VTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVTTSKL 126
           V A+SLM TA E++++SIYGF LPV SKWSFSD FEYLVGVS AVAA++LLQL+++ S+L
Sbjct: 64  VIALSLMATAKEAASISIYGFLLPVSSKWSFSDSFEYLVGVSAAVAAHALLQLIISVSRL 123

Query: 127 VRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKPLQRF 186
           +RKSPV+ SR+ AWLIFA D A AYA++SAGSAA+G++NLNRTGIRH+ LPNFCKPL+ F
Sbjct: 124 LRKSPVIPSRNHAWLIFAGDQAFAYAMLSAGSAASGVTNLNRTGIRHSPLPNFCKPLRSF 183

Query: 187 CNHVAISIAFTFFTCCLLTTSAIQYVIWLSK 216
           C+HVA SIAFTFF+C LL TSAI  VIWLSK
Sbjct: 184 CDHVAASIAFTFFSCFLLATSAILDVIWLSK 209

[Close]
BLAST of Csor.00g231190.m01 vs. ExPASy Swiss-Prot
Match: B9RQG7 (CASP-like protein 3A1 OS=Ricinus communis OX=3988 GN=RCOM_1491260 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 7.4e-62
Identity = 137/222 (61.71%), Postives = 168/222 (75.68%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASK---SGTI---GGLIEPSDRSLDCLRADLCQL 60
           MT  +K+    E AVQLPE +KVAA  +    SG +   GG+ +P  R     +AD+  +
Sbjct: 1   MTNGQKI----EVAVQLPE-SKVAATENNETMSGPLVVGGGVAKPFGR-----KADVMHV 60

Query: 61  MLRLICVATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSL 120
           +LRL+C  TSVTA+S MVTA +SSTVSIYGF LPV SKWSFS  FEYLVGVS AVAA+SL
Sbjct: 61  ILRLLCTITSVTAVSFMVTAHQSSTVSIYGFMLPVRSKWSFSHSFEYLVGVSAAVAAHSL 120

Query: 121 LQLLVTTSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTL 180
           LQLL++ S+L+RKSPV+ SRS AWLIFA D   AYA++SAG+AA+G++NLNRTGI+HT L
Sbjct: 121 LQLLISMSRLLRKSPVIPSRSHAWLIFAGDQVFAYAMISAGAAASGVTNLNRTGIQHTAL 180

Query: 181 PNFCKPLQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 217
           PNFCKPL  FCNHVA+SIAF F +C LL   A+Q VIWLSK+
Sbjct: 181 PNFCKPLNYFCNHVAVSIAFAFISCLLLAALAVQEVIWLSKS 212

[Close]
BLAST of Csor.00g231190.m01 vs. ExPASy Swiss-Prot
Match: B9GXD6 (CASP-like protein 3A1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_553757 PE=3 SV=2)

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-60
Identity = 132/223 (59.19%), Postives = 168/223 (75.34%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGG-LIEPSDRSLDCL------RADLCQ 60
           M   +K++   E AVQLPE +KVAA  + SGT+ G L+  S             +A++  
Sbjct: 2   MMNGQKLAPAAEVAVQLPE-SKVAA-DNISGTMSGPLVGASGGGTTAAMRPFGRKAEVMH 61

Query: 61  LMLRLICVATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYS 120
           ++LRL+C+ TSV A+S M TA +SST+SIYGF LPV SKWSFS  FEYLVGVS AVAA+S
Sbjct: 62  VLLRLLCIITSVAALSFMFTAQQSSTISIYGFMLPVQSKWSFSHSFEYLVGVSAAVAAHS 121

Query: 121 LLQLLVTTSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTT 180
           LLQLL++ S+L+RKSPV+ SRS AWLIFA D   AYA++SAG+AA+G++NLNRTGI+HT 
Sbjct: 122 LLQLLISMSRLLRKSPVIPSRSHAWLIFAGDQVFAYAMISAGAAASGVTNLNRTGIQHTA 181

Query: 181 LPNFCKPLQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 217
           LPNFCKPLQ FC+HVA+SI FTF +C LL  SA+Q VIWLS++
Sbjct: 182 LPNFCKPLQSFCDHVAVSIFFTFTSCFLLAASAVQEVIWLSRS 222

[Close]
BLAST of Csor.00g231190.m01 vs. ExPASy Swiss-Prot
Match: B9GGL4 (CASP-like protein 3A2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_751837 PE=2 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-59
Identity = 125/216 (57.87%), Postives = 160/216 (74.07%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60
           M   +KM++  E AVQLPE   V       G     + P  R     +A++  ++LR++C
Sbjct: 2   MMNGQKMAAA-EVAVQLPESKMV---TENIGGAAAAMRPFGR-----KAEVMNVLLRVLC 61

Query: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120
           + TSV A+S MVTA +SSTVSIYGF LP+ SKWSFS  FEY+VGVS  VAA+SLLQLL++
Sbjct: 62  MVTSVAALSSMVTAQQSSTVSIYGFMLPIQSKWSFSHSFEYVVGVSAVVAAHSLLQLLIS 121

Query: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180
            S+L+RKSPV+ SRS AWL+FA D   AYA++SAG+AA+G++NLNRTGIRHT LPNFCKP
Sbjct: 122 VSRLLRKSPVIQSRSHAWLVFAGDQVFAYAMISAGAAASGVTNLNRTGIRHTALPNFCKP 181

Query: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 217
           LQ FC+HVA+SI FTF +C LL  SA+Q VIWLS++
Sbjct: 182 LQSFCDHVAVSIFFTFLSCFLLAASAVQEVIWLSRS 208

[Close]
BLAST of Csor.00g231190.m01 vs. ExPASy Swiss-Prot
Match: A9NN43 (CASP-like protein 3A1 OS=Picea sitchensis OX=3332 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-43
Identity = 97/205 (47.32%), Postives = 136/205 (66.34%), Query Frame = 0 

Query: 15  VQLPEMTKVAAMASKSGTIGGLIEPSDRSLDC---LRADLCQLMLRLICVATSVTAMSLM 74
           + +   T    + + SG + G  E   R   C   +R DL  + LR++ +A S+ A+  M
Sbjct: 3   IGMDSSTMSGPLVAHSGILDGDYE--KRPAVCKMQMRFDLANVGLRVLSLACSLVALVSM 62

Query: 75  VTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVTTSKLVRKSPVL 134
            +  ES  V+++GF+LPV+SKWS+SD FE+LVG S A AA+SLLQLL+   K+V+++  +
Sbjct: 63  ASNQESGVVTVFGFKLPVYSKWSYSDSFEFLVGASAAAAAHSLLQLLLCGMKMVKRASTI 122

Query: 135 GSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKPLQRFCNHVAIS 194
            SR+ AWL+FA D   AY +++A SAAAG++NLNRTG RH+ LPNFCKPL RFC+  AIS
Sbjct: 123 PSRNHAWLLFAGDQVFAYGMLAAASAAAGVTNLNRTGFRHSDLPNFCKPLHRFCDKAAIS 182

Query: 195 IAFTFFTCCLLTTSAIQYVIWLSKN 217
           I F F +  +L  SA+  V WLSKN
Sbjct: 183 IVFAFISSLILGGSAVLDVFWLSKN 205

[Close]
BLAST of Csor.00g231190.m01 vs. NCBI nr
Match: KAG6593481.1 (CASP-like protein 3A1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 409 bits (1052), Expect = 9.64e-144
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60
           MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC
Sbjct: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60

Query: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120
           VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT
Sbjct: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120

Query: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180
           TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP
Sbjct: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180

Query: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216
           LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN
Sbjct: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216

[Close]
BLAST of Csor.00g231190.m01 vs. NCBI nr
Match: KAG7025825.1 (CASP-like protein 3A1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 400 bits (1028), Expect = 4.39e-140
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60
           MTGDRKMSSVPE AVQ+PEMTKVAAMASKSGTIGGLIEPSDRSLD LRADLCQLMLRLIC
Sbjct: 1   MTGDRKMSSVPEVAVQVPEMTKVAAMASKSGTIGGLIEPSDRSLDRLRADLCQLMLRLIC 60

Query: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120
           VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT
Sbjct: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120

Query: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180
           TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP
Sbjct: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180

Query: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216
           LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN
Sbjct: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216

[Close]
BLAST of Csor.00g231190.m01 vs. NCBI nr
Match: XP_022964006.1 (CASP-like protein 3A1 [Cucurbita moschata])

HSP 1 Score: 396 bits (1018), Expect = 1.47e-138
Identity = 212/216 (98.15%), Postives = 212/216 (98.15%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60
           MTGDRKMSSV E AVQLPEMTKVAAMASKSGTIGGLIEPSDRSLD LRADLCQLMLRLIC
Sbjct: 1   MTGDRKMSSVSEVAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDRLRADLCQLMLRLIC 60

Query: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120
           VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT
Sbjct: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120

Query: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180
           TSKLVRKSPVLGSR QAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP
Sbjct: 121 TSKLVRKSPVLGSRRQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180

Query: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216
           LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN
Sbjct: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216

[Close]
BLAST of Csor.00g231190.m01 vs. NCBI nr
Match: XP_023000388.1 (CASP-like protein 3A1 [Cucurbita maxima])

HSP 1 Score: 395 bits (1016), Expect = 2.97e-138
Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60
           M GDRKMSSVPE AVQLPEMTKVAAMASKSGTIGGLIEPSDRSLD LRADLCQLMLRLIC
Sbjct: 1   MAGDRKMSSVPEVAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDRLRADLCQLMLRLIC 60

Query: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120
           VATSVTAMSLMVTAAESSTVSIYGFELPVHS WSFSDVFEYLVGVSGAVA YSLLQLLVT
Sbjct: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSNWSFSDVFEYLVGVSGAVAVYSLLQLLVT 120

Query: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180
           TSKL+RKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP
Sbjct: 121 TSKLIRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180

Query: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216
           LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN
Sbjct: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216

[Close]
BLAST of Csor.00g231190.m01 vs. NCBI nr
Match: XP_023513607.1 (CASP-like protein 3A1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375 bits (962), Expect = 3.93e-130
Identity = 203/216 (93.98%), Postives = 204/216 (94.44%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60
           MTGDRKMSSVPE AVQLPEMTK+         IGGLIEPSDRSLD LRADLCQLMLRLIC
Sbjct: 1   MTGDRKMSSVPEVAVQLPEMTKLRP-------IGGLIEPSDRSLDRLRADLCQLMLRLIC 60

Query: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120
           VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT
Sbjct: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120

Query: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180
           TSKLVRKSPVLGSR QAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP
Sbjct: 121 TSKLVRKSPVLGSRRQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180

Query: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216
           LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN
Sbjct: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 209

[Close]
BLAST of Csor.00g231190.m01 vs. ExPASy TrEMBL
Match: A0A6J1HHN1 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464155 PE=3 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 7.12e-139
Identity = 212/216 (98.15%), Postives = 212/216 (98.15%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60
           MTGDRKMSSV E AVQLPEMTKVAAMASKSGTIGGLIEPSDRSLD LRADLCQLMLRLIC
Sbjct: 1   MTGDRKMSSVSEVAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDRLRADLCQLMLRLIC 60

Query: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120
           VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT
Sbjct: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120

Query: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180
           TSKLVRKSPVLGSR QAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP
Sbjct: 121 TSKLVRKSPVLGSRRQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180

Query: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216
           LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN
Sbjct: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216

[Close]
BLAST of Csor.00g231190.m01 vs. ExPASy TrEMBL
Match: A0A6J1KMH1 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494645 PE=3 SV=1)

HSP 1 Score: 395 bits (1016), Expect = 1.44e-138
Identity = 210/216 (97.22%), Postives = 211/216 (97.69%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60
           M GDRKMSSVPE AVQLPEMTKVAAMASKSGTIGGLIEPSDRSLD LRADLCQLMLRLIC
Sbjct: 1   MAGDRKMSSVPEVAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDRLRADLCQLMLRLIC 60

Query: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120
           VATSVTAMSLMVTAAESSTVSIYGFELPVHS WSFSDVFEYLVGVSGAVA YSLLQLLVT
Sbjct: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSNWSFSDVFEYLVGVSGAVAVYSLLQLLVT 120

Query: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180
           TSKL+RKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP
Sbjct: 121 TSKLIRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180

Query: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216
           LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN
Sbjct: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216

[Close]
BLAST of Csor.00g231190.m01 vs. ExPASy TrEMBL
Match: A0A0A0KCU6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G453000 PE=3 SV=1)

HSP 1 Score: 337 bits (865), Expect = 1.46e-115
Identity = 176/216 (81.48%), Postives = 190/216 (87.96%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60
           MTG+RKM   PE  VQLPE TKVAA++S+SG I   +EP DRS D LRADLCQ  LRL+C
Sbjct: 1   MTGERKMPPAPEAEVQLPETTKVAAISSESGRISRPMEPPDRSFDRLRADLCQFALRLVC 60

Query: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120
           +ATS T ++LMVTA +S+TV+IYGFE PV SKWSFSD FEYLVGVSGAVAAYSLLQLLVT
Sbjct: 61  IATSTTTVALMVTAKDSTTVTIYGFEFPVQSKWSFSDAFEYLVGVSGAVAAYSLLQLLVT 120

Query: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180
            S L R+SPVL SRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGI+HT LPNFCKP
Sbjct: 121 VSMLARRSPVLSSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIQHTALPNFCKP 180

Query: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216
           LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN
Sbjct: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216

[Close]
BLAST of Csor.00g231190.m01 vs. ExPASy TrEMBL
Match: A0A5A7U5A3 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00190 PE=3 SV=1)

HSP 1 Score: 334 bits (857), Expect = 2.42e-114
Identity = 177/216 (81.94%), Postives = 191/216 (88.43%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60
           MTG+RKM   PE AV+LPE TKVAA+AS+SG     +EP DR  D LRADL QL LRLIC
Sbjct: 1   MTGERKMPPAPEAAVRLPETTKVAAIASESGRTSRPMEPPDRRFDRLRADLYQLALRLIC 60

Query: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120
           +ATS T ++LMVTA +S+TVSIYGFE PV SKWSFS+VFEYLVGVSGAVAAYSLLQLLVT
Sbjct: 61  IATSTTTVALMVTAKDSTTVSIYGFEFPVQSKWSFSNVFEYLVGVSGAVAAYSLLQLLVT 120

Query: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180
            S L R+SPVL SRSQAWLIFAVDL+LAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP
Sbjct: 121 ASMLARRSPVLSSRSQAWLIFAVDLSLAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180

Query: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216
           L+RFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN
Sbjct: 181 LKRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216

[Close]
BLAST of Csor.00g231190.m01 vs. ExPASy TrEMBL
Match: A0A1S3CGY3 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500792 PE=3 SV=1)

HSP 1 Score: 333 bits (853), Expect = 9.85e-114
Identity = 176/216 (81.48%), Postives = 191/216 (88.43%), Query Frame = 0 

Query: 1   MTGDRKMSSVPEGAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDCLRADLCQLMLRLIC 60
           MTG+RKM   PE AV+LPE T+VAA+AS+SG     +EP DR  D LRADL QL LRLIC
Sbjct: 1   MTGERKMPPAPEAAVRLPETTEVAAIASESGRTSRPMEPPDRRFDRLRADLYQLALRLIC 60

Query: 61  VATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVT 120
           +ATS T ++LMVTA +S+TVSIYGFE PV SKWSFS+VFEYLVGVSGAVAAYSLLQLLVT
Sbjct: 61  IATSTTTVALMVTAKDSTTVSIYGFEFPVQSKWSFSNVFEYLVGVSGAVAAYSLLQLLVT 120

Query: 121 TSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180
            S L R+SPVL SRSQAWLIFAVDL+LAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP
Sbjct: 121 ASMLARRSPVLSSRSQAWLIFAVDLSLAYALMSAGSAAAGISNLNRTGIRHTTLPNFCKP 180

Query: 181 LQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216
           L+RFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN
Sbjct: 181 LKRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 216

[Close]
BLAST of Csor.00g231190.m01 vs. TAIR 10
Match: AT3G16300.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 164.5 bits (415), Expect = 9.7e-41
Identity = 84/169 (49.70%), Postives = 118/169 (69.82%), Query Frame = 0 

Query: 48  RADLCQLMLRLICVATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSG 107
           R D+   +LR +C+A S  A++LMVTA E+S  ++YGFE  +H+ WS SD   YLV VS 
Sbjct: 43  RNDVAMFVLRAMCMAVSTVAVTLMVTARETSMTTLYGFEFQLHAVWSLSDSLIYLVVVSS 102

Query: 108 AVAAYSLLQLLVTTSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRT 167
           A   YSL+QL+++ ++L+RKSPV+ +R+QAW  F  D  + YA++S GSAA G++N+NRT
Sbjct: 103 ATVLYSLIQLIISGTRLMRKSPVIPTRTQAWFCFVADQIIGYAMVSGGSAALGVTNMNRT 162

Query: 168 GIRHTTLPNFCKPLQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLSKN 217
           GIRH  LPNFCK L  FC+H+A SI F  F   LL  S++  V+ LS++
Sbjct: 163 GIRHMPLPNFCKSLGFFCDHLAGSIVFALFAFLLLAASSLLDVLHLSRH 211

[Close]
BLAST of Csor.00g231190.m01 vs. TAIR 10
Match: AT1G79780.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 151.8 bits (382), Expect = 6.5e-37
Identity = 81/165 (49.09%), Postives = 107/165 (64.85%), Query Frame = 0 

Query: 50  DLCQLMLRLICVATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAV 109
           +L Q+ LR  C+A S TAM++M+TA E     IYGF+L + S WSFS  ++Y+VG     
Sbjct: 21  ELVQVALRGGCLAASATAMAVMLTATEEGVADIYGFKLTLSSNWSFSPSYQYVVGACAGT 80

Query: 110 AAYSLLQLLVTTSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGI 169
             YSLLQL +   +LV  SP+  SR QAWL F  D    Y +MSAGSA +G++NLN+TGI
Sbjct: 81  VLYSLLQLCLGVYRLVTGSPITPSRFQAWLCFTSDQLFCYLMMSAGSAGSGVTNLNKTGI 140

Query: 170 RHTTLPNFCKPLQRFCNHVAISIAFTFFTCCLLTTSAIQYVIWLS 215
           RHT LP+FCK L  FCNHVA+S+   F +   L +S+   V+ LS
Sbjct: 141 RHTPLPDFCKTLSSFCNHVALSLLLVFLSFIFLASSSFFTVLVLS 185

[Close]
BLAST of Csor.00g231190.m01 vs. TAIR 10
Match: AT3G55390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 43.1 bits (100), Expect = 3.3e-04
Identity = 41/144 (28.47%), Postives = 63/144 (43.75%), Query Frame = 0 

Query: 54  LMLRLICVATSVTAMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYS 113
           L+LRL   + S+ +   M+T +  S              W   D F ++   +  VA YS
Sbjct: 38  LLLRLASFSFSLASAVFMLTNSRGS----------ASPHWYDFDAFRFVFVANAIVALYS 97

Query: 114 LLQLLVTTSKLVRKSPVLGSRSQAWLIFAVDLALAYALMSAGSAAAGISNLNRTGIRHTT 173
           + ++     +  R++ +     Q W  F  D   +Y L+SAGSAAA ++   R G   T 
Sbjct: 98  VFEMGTCVWEFSRETTLWPEAFQVWFDFGHDQVFSYLLLSAGSAAAALARTMRGGDTCTA 157

Query: 174 LPNFCKPLQRFCNHVAISIAFTFF 198
              FC  LQ   + VAI + F  F
Sbjct: 158 NKAFC--LQ---SDVAIGLGFAAF 166

The following BLAST results are available for this feature:
BLAST of Csor.00g231190.m01 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A7P7562.6e-6261.61CASP-like protein 3A1 OS=Vitis vinifera OX=29760 GN=VIT_09s0002g03780 PE=2 SV=1[more]
B9RQG77.4e-6261.71CASP-like protein 3A1 OS=Ricinus communis OX=3988 GN=RCOM_1491260 PE=2 SV=1[more]
B9GXD61.4e-6059.19CASP-like protein 3A1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_553757 PE=3 S... [more]
B9GGL42.0e-5957.87CASP-like protein 3A2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_751837 PE=2 S... [more]
A9NN432.0e-4347.32CASP-like protein 3A1 OS=Picea sitchensis OX=3332 PE=2 SV=1[more]
BLAST of Csor.00g231190.m01 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6593481.19.64e-144100.00CASP-like protein 3A1, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7025825.14.39e-14098.61CASP-like protein 3A1 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022964006.11.47e-13898.15CASP-like protein 3A1 [Cucurbita moschata][more]
XP_023000388.12.97e-13897.22CASP-like protein 3A1 [Cucurbita maxima][more]
XP_023513607.13.93e-13093.98CASP-like protein 3A1 [Cucurbita pepo subsp. pepo][more]
BLAST of Csor.00g231190.m01 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HHN17.12e-13998.15CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464155 PE=3 SV=1[more]
A0A6J1KMH11.44e-13897.22CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494645 PE=3 SV=1[more]
A0A0A0KCU61.46e-11581.48CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G453000 PE=3 SV=1[more]
A0A5A7U5A32.42e-11481.94CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00... [more]
A0A1S3CGY39.85e-11481.48CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500792 PE=3 SV=1[more]
BLAST of Csor.00g231190.m01 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G16300.19.7e-4149.70Uncharacterised protein family (UPF0497) [more]
AT1G79780.16.5e-3749.09Uncharacterised protein family (UPF0497) [more]
AT3G55390.13.3e-0428.47Uncharacterised protein family (UPF0497) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 50..200
e-value: 2.1E-38
score: 131.4
IPR006459Casparian strip membrane proteinTIGRFAMTIGR01569TIGR01569coord: 54..203
e-value: 2.5E-23
score: 80.6
NoneNo IPR availablePANTHERPTHR11615NITRATE, FORMATE, IRON DEHYDROGENASEcoord: 7..215
NoneNo IPR availablePANTHERPTHR11615:SF243CASP-LIKE PROTEIN 3A2coord: 7..215

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csor.00g231190Csor.00g231190gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g231190.m01.CDS01Csor.00g231190.m01.CDS01CDS
Csor.00g231190.m01.CDS02Csor.00g231190.m01.CDS02CDS
Csor.00g231190.m01.CDS03Csor.00g231190.m01.CDS03CDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g231190.m01.stop_codon01Csor.00g231190.m01.stop_codon01stop_codon


The following terminal feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g231190.m01.terminal01Csor.00g231190.m01.terminal01terminal


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g231190.m01.intron01Csor.00g231190.m01.intron01intron
Csor.00g231190.m01.intron02Csor.00g231190.m01.intron02intron


The following internal feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g231190.m01.internal01Csor.00g231190.m01.internal01internal


The following initial feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g231190.m01.initial01Csor.00g231190.m01.initial01initial


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csor.00g231190.m01.start_codon01Csor.00g231190.m01.start_codon01start_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csor.00g231190.m01Csor.00g231190.m01-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding