Csor.00g216310.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g216310.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	axial regulator YABBY 5-like
Location	Csor_Chr10: 2604753 .. 2606568 (+)
Sequence length	543
RNA-Seq Expression	Csor.00g216310.m01
Synteny	Csor.00g216310.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAGCTGCCTCGATATTGCACCTGAACAGCTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGGTACTCATAAATTCTCTTCCTGTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTAGATCTTTATGGAAAATGCTCAATTCAAATGGTTTTGTAGATGAAAATGGGTGAGGGGAAGATATTAATTTGGGAAATTTTGGGTTGGAGTTTCAAACTTATGATGAACACAATTCATTAATGCCTTTTCTTTCTTTGAAACCTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCCAGCTGCTTTGCTCAATGGGGGATGATAACACTAATCAACATCTCACTCCAATTTTCAAAACAACATGCAACCATCTAAAAAAACCCTAAACAAAAACACCCTTCTCGGGTTTGGTCGTAATTCTATTTCTATCAACTTAAGCTTTAATGATTATGACGATGACAACGATGACGATGATGATGGGCAGGTGAGTGTTCCATGCAGTAGCTTGTTTGATATTGTGACAGTCCGATGTGGGCACTGCACAAATCTGTGGTCCGTGAATATGGCTGCTGCATTTCAGGCTCTTTCCTGGCAAGATGTTCAGGTAACCCTAATAACCTAAACTTATAATTCAAAGAAAAAGGCTTCAAATTTTGCATCTTTTTGACAAATTCGATGTGACCCAGATTCTAAAATCTTGAAACTAAGACAACCCACTTCAAAGTTTTCATTTTTATTTACACCACACAAAACCCTAGATAGCTACCTCCCACAGCTACTCAGCCGCCATAACCCCCATTGTTTTCCTCTTTTATCCACTGAGTTTCTTCATGTTCTTTCAGGTTTTAAGTGCTTTTGCGTTTAGGGTTCTTTTAGTTTTTGTAGTATGAAGCCTATATTGGTAGCTAGGTTTCTTTTGTCATTTACTGTTCCAACGTTCACAGAAAAAGGAAAAGATGGCCAAGATCTGAAACCCCCTTTTGAATTTGTTTGGATATTCAACTCTCATCTGGGTGTTATATGCTTTATGAACTCATCAAACATCATTTCACGGTTGAGGAGGATTGTTAGGAGAGAGTCCCACATTCTCTAATTTAGAGAAGAATCATACGTTTATAAGTGAGGAATACATCTCTGTTAGAGTTTCATGTCTGTTGAACTATGCTTGAATTGGAATATGAAAATTTGTAGGTACCGAATTACAATTTATACAGTGGTAACGGACCTGATTTTCAAGGTGATTTTGGATCGTCGTCGTCTTCATCATCATCGAAATGTAATAACAACAAGATGGAAATTCGAGCAAACACAACAATGGGAACAGAGGAGAGGATTGTGAATCGACGTCAGTGTTCTTTCATTTACTTTCCTCTGCAAATCTCCTAAAAAAAAATTGAAATTTTATGAGTTGTTGTTATCCTTTTTCAGCTCCCGAGAAGAAGCAGAGAGTACCATCTGCATATAATCAGTTCATAAAGTGAGTAACCAAAGCCTTCACAACTTCTTTCAAAAATGTTCTAAATTCATTATATTTTCAGTTCTTAATTGTGATTTAATTGTGTTTCAGAGAGGAAATCCAAAGGATTAAGGCTAATAATCCTGAGATTAGCCATAGAGAAGCTTTCAGTACTGCAGCCAAGAACGTAAGCTTAATTACAACAAACAAATTTTGGATGAAATGAATTTAAATTTGCTTATAAATCTCCAATTTTGATCAGTGGGCACATTATCCTCGTATACCCTTTTGGTCGGATGTTGGAAACCAGCAATCCAATGAAGCTAGATGA

mRNA sequence

ATGGCCAGCTGCCTCGATATTGCACCTGAACAGCTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCTTGTTTGATATTGTGACAGTCCGATGTGGGCACTGCACAAATCTGTGGTCCGTGAATATGGCTGCTGCATTTCAGGCTCTTTCCTGGCAAGATGTTCAGGTACCGAATTACAATTTATACAGTGGTAACGGACCTGATTTTCAAGGTGATTTTGGATCGTCGTCGTCTTCATCATCATCGAAATGTAATAACAACAAGATGGAAATTCGAGCAAACACAACAATGGGAACAGAGGAGAGGATTGTGAATCGACCTCCCGAGAAGAAGCAGAGAGTACCATCTGCATATAATCAGTTCATAAAAGAGGAAATCCAAAGGATTAAGGCTAATAATCCTGAGATTAGCCATAGAGAAGCTTTCAGTACTGCAGCCAAGAACTGGGCACATTATCCTCGTATACCCTTTTGGTCGGATGTTGGAAACCAGCAATCCAATGAAGCTAGATGA

Coding sequence (CDS)

ATGGCCAGCTGCCTCGATATTGCACCTGAACAGCTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCTTGTTTGATATTGTGACAGTCCGATGTGGGCACTGCACAAATCTGTGGTCCGTGAATATGGCTGCTGCATTTCAGGCTCTTTCCTGGCAAGATGTTCAGGTACCGAATTACAATTTATACAGTGGTAACGGACCTGATTTTCAAGGTGATTTTGGATCGTCGTCGTCTTCATCATCATCGAAATGTAATAACAACAAGATGGAAATTCGAGCAAACACAACAATGGGAACAGAGGAGAGGATTGTGAATCGACCTCCCGAGAAGAAGCAGAGAGTACCATCTGCATATAATCAGTTCATAAAAGAGGAAATCCAAAGGATTAAGGCTAATAATCCTGAGATTAGCCATAGAGAAGCTTTCAGTACTGCAGCCAAGAACTGGGCACATTATCCTCGTATACCCTTTTGGTCGGATGTTGGAAACCAGCAATCCAATGAAGCTAGATGA

Protein sequence

MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALSWQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEKKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR

Homology

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BLAST of Csor.00g216310.m01 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.3e-55
Identity = 112/161 (69.57%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 7   IAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALSWQDVQV 66
           +A EQLCYIPCNFCNI+LAV+VPCSSLFDIVTVRCGHCTNLWSVNMAAA Q+LS  + Q 
Sbjct: 6   MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQA 65

Query: 67  PNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEKKQRVPS 126
            NY +          ++GSSS S      + K+  R +T   TE+RIVNRPPEK+QRVPS
Sbjct: 66  TNYAV---------PEYGSSSRS------HTKIPSRISTRTITEQRIVNRPPEKRQRVPS 125

Query: 127 AYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPF 168
           AYNQFIKEEIQRIKANNP+ISHREAFSTAAKNWAH+P I F
Sbjct: 126 AYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 151

[Close]

BLAST of Csor.00g216310.m01 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.7e-40
Identity = 89/171 (52.05%), Postives = 118/171 (69.01%), Query Frame = 0


Query: 8   APEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALSWQDVQVP 67
           APE +CY+ CNFCN + AVSVP +S+ +IVTVRCGHCT+L SVN+    QAL  +D    
Sbjct: 8   APEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHLQD 67

Query: 68  NYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEKKQRVPSA 127
           N  +++ +  +   ++GSSS         +K +        TE  +  RPPEK+QRVPSA
Sbjct: 68  NLKMHNMSFRENYSEYGSSSRYGRVPMMFSKND--------TEHMLHVRPPEKRQRVPSA 127

Query: 128 YNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNE 179
           YN+FIKEEI+RIKANNP+ISHREAFSTAAKNWAH+P I F   +G+ +S++
Sbjct: 128 YNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIHF--GLGSHESSK 168

[Close]

BLAST of Csor.00g216310.m01 vs. ExPASy Swiss-Prot
Match: Q2QM17 (Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.8e-38
Identity = 99/181 (54.70%), Postives = 119/181 (65.75%), Query Frame = 0


Query: 7   IAP-EQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNM------AAAFQAL 66
           IAP EQ+CY+ CNFCN +LAVSVP +S+ +IVTVRCGHCTNL SVN+      A A Q  
Sbjct: 5   IAPAEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQDH 64

Query: 67  SWQDVQVPNYNLYSGNGPDFQG--DFGSSSSSSSSKCN----NNKMEIRANTTMGTEERI 126
               +Q       SG   D  G  +FG S++SSSSK         M   +      E+ +
Sbjct: 65  HHHHLQESG---LSGCFRDQSGYPEFGFSAASSSSKLRLPPAAAAMVSYSQQNQQLEQAL 124

Query: 127 VNRPPEKKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGN 175
             RPPEK+QRVPSAYN+FIKEEI+RIKANNP+ISHREAFSTAAKNWAHYP I F    G+
Sbjct: 125 HARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGLSPGH 182

[Close]

BLAST of Csor.00g216310.m01 vs. ExPASy Swiss-Prot
Match: Q7XIM7 (Protein YABBY 1 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB1 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.2e-35
Identity = 87/167 (52.10%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 10  EQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALSWQDVQVPNY 69
           E +CY+ CN+CN +L V+VP +  ++IVTVRCGHCT + S+++A   QA + QD QV N 
Sbjct: 8   EHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQDHQVQNR 67

Query: 70  NLYSGNGPDFQG-DFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVN--RPPEKKQRVPS 129
                    FQG +FGS   +S      N+    A   M T ++ V+  RPPEK+QRVPS
Sbjct: 68  G--------FQGNNFGSYDIAS-----RNQRTSTAMYPMPTSQQQVSPIRPPEKRQRVPS 127

Query: 130 AYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGN 174
           AYN+FIKEEIQRIK +NPEISHREAFS AAKNWAH PR+ F   V +
Sbjct: 128 AYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGLSVAD 161

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BLAST of Csor.00g216310.m01 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.9e-35
Identity = 87/167 (52.10%), Postives = 106/167 (63.47%), Query Frame = 0


Query: 5   LDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS---- 64
           +D + E++CY+ C+FC  +LAVSVP +SLF +VTVRCGHCTNL S+N+  +    S    
Sbjct: 3   VDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPI 62

Query: 65  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEK 124
            QD+Q    +  S               +SSS+  NN  E   N           RPPEK
Sbjct: 63  HQDLQPHRQHTTS--------LVTRKDCASSSRSTNNLSE---NIDREAPRMPPIRPPEK 122

Query: 125 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPF 168
           +QRVPSAYN+FIKEEIQRIKA NPEISHREAFSTAAKNWAH+P I F
Sbjct: 123 RQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHF 158

[Close]

BLAST of Csor.00g216310.m01 vs. NCBI nr
Match: KAG6589841.1 (Axial regulator YABBY 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 368 bits (945), Expect = 1.27e-128
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60
           MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS
Sbjct: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60

Query: 61  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEK 120
           WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEK
Sbjct: 61  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEK 120

Query: 121 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR 180
           KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR
Sbjct: 121 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR 180

[Close]

BLAST of Csor.00g216310.m01 vs. NCBI nr
Match: KAG7023513.1 (Axial regulator YABBY 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360 bits (923), Expect = 2.99e-125
Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60
           MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS
Sbjct: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60

Query: 61  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSS-KCNNNKMEIRANTTMGTEERIVNRPPE 120
           WQDVQVPNYNLYS NGPDFQGDFGSSSSSSSS KCNNNKMEIRANTTMGTEER+VNRPPE
Sbjct: 61  WQDVQVPNYNLYSCNGPDFQGDFGSSSSSSSSSKCNNNKMEIRANTTMGTEERVVNRPPE 120

Query: 121 KKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEA 180
           KKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEA
Sbjct: 121 KKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEA 180

[Close]

BLAST of Csor.00g216310.m01 vs. NCBI nr
Match: XP_023515707.1 (axial regulator YABBY 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359 bits (921), Expect = 5.82e-125
Identity = 176/180 (97.78%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60
           MASCLDIA EQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS
Sbjct: 1   MASCLDIATEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60

Query: 61  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEK 120
           WQDVQVPNYNLYS NGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTM TEER+VNRPPEK
Sbjct: 61  WQDVQVPNYNLYSCNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMATEERVVNRPPEK 120

Query: 121 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR 180
           KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR
Sbjct: 121 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR 180

[Close]

BLAST of Csor.00g216310.m01 vs. NCBI nr
Match: XP_022960833.1 (axial regulator YABBY 5-like [Cucurbita moschata])

HSP 1 Score: 357 bits (917), Expect = 2.46e-124
Identity = 177/181 (97.79%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60
           MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS
Sbjct: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60

Query: 61  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSS-KCNNNKMEIRANTTMGTEERIVNRPPE 120
           WQDVQVPNYNLYS NGPDFQGDFGSSSSSSSS KC NNKMEIRANTTMGTEER+VNRPPE
Sbjct: 61  WQDVQVPNYNLYSCNGPDFQGDFGSSSSSSSSSKCENNKMEIRANTTMGTEERVVNRPPE 120

Query: 121 KKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEA 180
           KKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEA
Sbjct: 121 KKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEA 180

[Close]

BLAST of Csor.00g216310.m01 vs. NCBI nr
Match: XP_022987887.1 (axial regulator YABBY 5-like [Cucurbita maxima])

HSP 1 Score: 353 bits (905), Expect = 1.49e-122
Identity = 174/180 (96.67%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60
           MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS
Sbjct: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60

Query: 61  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEK 120
           WQDVQVPNYNLYS NGPDFQGDFGSSSSSS  KCNNNKMEIRANTTM  EER+VNRPPEK
Sbjct: 61  WQDVQVPNYNLYSCNGPDFQGDFGSSSSSS--KCNNNKMEIRANTTMAAEERVVNRPPEK 120

Query: 121 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR 180
           KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR
Sbjct: 121 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR 178

[Close]

BLAST of Csor.00g216310.m01 vs. ExPASy TrEMBL
Match: A0A6J1HA48 (axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111461521 PE=3 SV=1)

HSP 1 Score: 357 bits (917), Expect = 1.19e-124
Identity = 177/181 (97.79%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60
           MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS
Sbjct: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60

Query: 61  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSS-KCNNNKMEIRANTTMGTEERIVNRPPE 120
           WQDVQVPNYNLYS NGPDFQGDFGSSSSSSSS KC NNKMEIRANTTMGTEER+VNRPPE
Sbjct: 61  WQDVQVPNYNLYSCNGPDFQGDFGSSSSSSSSSKCENNKMEIRANTTMGTEERVVNRPPE 120

Query: 121 KKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEA 180
           KKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEA
Sbjct: 121 KKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEA 180

[Close]

BLAST of Csor.00g216310.m01 vs. ExPASy TrEMBL
Match: A0A6J1JBL1 (axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111485293 PE=3 SV=1)

HSP 1 Score: 353 bits (905), Expect = 7.23e-123
Identity = 174/180 (96.67%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60
           MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS
Sbjct: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60

Query: 61  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEK 120
           WQDVQVPNYNLYS NGPDFQGDFGSSSSSS  KCNNNKMEIRANTTM  EER+VNRPPEK
Sbjct: 61  WQDVQVPNYNLYSCNGPDFQGDFGSSSSSS--KCNNNKMEIRANTTMAAEERVVNRPPEK 120

Query: 121 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR 180
           KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR
Sbjct: 121 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQQSNEAR 178

[Close]

BLAST of Csor.00g216310.m01 vs. ExPASy TrEMBL
Match: A0A6J1CSS6 (axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111014425 PE=3 SV=1)

HSP 1 Score: 305 bits (780), Expect = 1.13e-103
Identity = 150/167 (89.82%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60
           MASC+DIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQ+LS
Sbjct: 1   MASCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLS 60

Query: 61  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEK 120
           WQDVQVPNYNLYS +GPDFQGDFGSSS     KCNNNKMEIRA TT+  EER+VNRPPEK
Sbjct: 61  WQDVQVPNYNLYSCSGPDFQGDFGSSS-----KCNNNKMEIRAPTTIPAEERVVNRPPEK 120

Query: 121 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPF 167
           +QRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAH+PRI F
Sbjct: 121 RQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPRIHF 162

[Close]

BLAST of Csor.00g216310.m01 vs. ExPASy TrEMBL
Match: A0A6J1KTI6 (axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111497478 PE=3 SV=1)

HSP 1 Score: 295 bits (755), Expect = 8.33e-100
Identity = 145/168 (86.31%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60
           M+SC+DIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQ+LS
Sbjct: 1   MSSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLS 60

Query: 61  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKC-NNNKMEIRANTTMGTEERIVNRPPE 120
           WQDVQVPNYNLY+ +GPDFQGDFGSSS     KC NNNKM+IR +TT+  EER+VNRPPE
Sbjct: 61  WQDVQVPNYNLYTSSGPDFQGDFGSSS-----KCDNNNKMQIRDSTTIAAEERVVNRPPE 120

Query: 121 KKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPF 167
           K+QRVPSAYNQFIKEEIQRIKA NPEISHREAFSTAAKNWAH+PRI F
Sbjct: 121 KRQRVPSAYNQFIKEEIQRIKAKNPEISHREAFSTAAKNWAHFPRIHF 163

[Close]

BLAST of Csor.00g216310.m01 vs. ExPASy TrEMBL
Match: A0A6J1F4T3 (axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111440865 PE=3 SV=1)

HSP 1 Score: 294 bits (753), Expect = 1.62e-99
Identity = 142/167 (85.03%), Postives = 155/167 (92.81%), Query Frame = 0


Query: 1   MASCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS 60
           M+SC+DIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQ+LS
Sbjct: 1   MSSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLS 60

Query: 61  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEK 120
           WQDVQVPNYNLY+ +GPDFQGDFGSSS     KC+NNKM+IR + T+  EER+VNRPPEK
Sbjct: 61  WQDVQVPNYNLYTSSGPDFQGDFGSSS-----KCDNNKMQIRDSATIAAEERVVNRPPEK 120

Query: 121 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPF 167
           +QRVPSAYNQFIKEEI+RIKA NPEISHREAFSTAAKNWAH+PRI F
Sbjct: 121 RQRVPSAYNQFIKEEIRRIKAKNPEISHREAFSTAAKNWAHFPRIHF 162

[Close]

BLAST of Csor.00g216310.m01 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 214.9 bits (546), Expect = 5.2e-56
Identity = 112/161 (69.57%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 7   IAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALSWQDVQV 66
           +A EQLCYIPCNFCNI+LAV+VPCSSLFDIVTVRCGHCTNLWSVNMAAA Q+LS  + Q 
Sbjct: 6   MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQA 65

Query: 67  PNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEKKQRVPS 126
            NY +          ++GSSS S      + K+  R +T   TE+RIVNRPPEK+QRVPS
Sbjct: 66  TNYAV---------PEYGSSSRS------HTKIPSRISTRTITEQRIVNRPPEKRQRVPS 125

Query: 127 AYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPF 168
           AYNQFIKEEIQRIKANNP+ISHREAFSTAAKNWAH+P I F
Sbjct: 126 AYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 151

[Close]

BLAST of Csor.00g216310.m01 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 214.9 bits (546), Expect = 5.2e-56
Identity = 112/161 (69.57%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 7   IAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALSWQDVQV 66
           +A EQLCYIPCNFCNI+LAV+VPCSSLFDIVTVRCGHCTNLWSVNMAAA Q+LS  + Q 
Sbjct: 6   MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQA 65

Query: 67  PNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEKKQRVPS 126
            NY +          ++GSSS S      + K+  R +T   TE+RIVNRPPEK+QRVPS
Sbjct: 66  TNYAV---------PEYGSSSRS------HTKIPSRISTRTITEQRIVNRPPEKRQRVPS 125

Query: 127 AYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPF 168
           AYNQFIKEEIQRIKANNP+ISHREAFSTAAKNWAH+P I F
Sbjct: 126 AYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 151

[Close]

BLAST of Csor.00g216310.m01 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 149.1 bits (375), Expect = 3.5e-36
Identity = 87/167 (52.10%), Postives = 106/167 (63.47%), Query Frame = 0


Query: 5   LDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALS---- 64
           +D + E++CY+ C+FC  +LAVSVP +SLF +VTVRCGHCTNL S+N+  +    S    
Sbjct: 3   VDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPI 62

Query: 65  WQDVQVPNYNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIVNRPPEK 124
            QD+Q    +  S               +SSS+  NN  E   N           RPPEK
Sbjct: 63  HQDLQPHRQHTTS--------LVTRKDCASSSRSTNNLSE---NIDREAPRMPPIRPPEK 122

Query: 125 KQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPF 168
           +QRVPSAYN+FIKEEIQRIKA NPEISHREAFSTAAKNWAH+P I F
Sbjct: 123 RQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHF 158

[Close]

BLAST of Csor.00g216310.m01 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 142.9 bits (359), Expect = 2.5e-34
Identity = 87/180 (48.33%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 10  EQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAA-AFQALSWQDVQVPN 69
           + LCY+ CNFC  +LAV+VP +SLF  VTVRCG CTNL SVNM +    A +   +Q+  
Sbjct: 23  DHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLGP 82

Query: 70  YNLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMG--------------TEERIV 129
           ++ +  N  D   +   + S      N N M +  + TM                +   V
Sbjct: 83  HSYF--NPQDILEELRDAPS------NMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPPV 142

Query: 130 NRPPEKKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPFWSDVGNQ 175
           NRPPEK+QRVPSAYN+FIKEEIQRIKA NP+ISHREAFS AAKNWAH+P I F     NQ
Sbjct: 143 NRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQ 194

[Close]

BLAST of Csor.00g216310.m01 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-33
Identity = 85/179 (47.49%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 10  EQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQALSWQDVQVPNY 69
           +QLCY+ C+FC+ VLAVSVP SSLF  VTVRCGHC+NL SV +  + +AL    V    +
Sbjct: 23  DQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTV--SMRALLLPSVSNLGH 82

Query: 70  NLYSGNGPDFQGDFGSSSSSSSSKCNNNKMEIRANTTMGTEERIV--------------- 129
           +      P    +      S     N N M     +     E +V               
Sbjct: 83  SFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEM 142

Query: 130 ------NRPPEKKQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHYPRIPF 168
                 NRPPEK+QRVPSAYN+FIKEEIQRIKA NP+ISHREAFS AAKNWAH+P I F
Sbjct: 143 PRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHF 199

The following BLAST results are available for this feature:

BLAST of Csor.00g216310.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW46	7.3e-55	69.57	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]
Q10FZ7	8.7e-40	52.05	Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1	[more]
Q2QM17	2.8e-38	54.70	Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1	[more]
Q7XIM7	2.2e-35	52.10	Protein YABBY 1 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB1 PE=2 SV=1	[more]
Q9XFB0	4.9e-35	52.10	Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV...	[more]

BLAST of Csor.00g216310.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589841.1	1.27e-128	100.00	Axial regulator YABBY 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7023513.1	2.99e-125	98.34	Axial regulator YABBY 5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023515707.1	5.82e-125	97.78	axial regulator YABBY 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960833.1	2.46e-124	97.79	axial regulator YABBY 5-like [Cucurbita moschata]	[more]
XP_022987887.1	1.49e-122	96.67	axial regulator YABBY 5-like [Cucurbita maxima]	[more]

BLAST of Csor.00g216310.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HA48	1.19e-124	97.79	axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111461521 PE=3 ...	[more]
A0A6J1JBL1	7.23e-123	96.67	axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111485293 PE=3 SV...	[more]
A0A6J1CSS6	1.13e-103	89.82	axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111014425 PE=3...	[more]
A0A6J1KTI6	8.33e-100	86.31	axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111497478 PE=3 SV...	[more]
A0A6J1F4T3	1.62e-99	85.03	axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111440865 PE=3 ...	[more]

BLAST of Csor.00g216310.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26580.1	5.2e-56	69.57	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	5.2e-56	69.57	plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	3.5e-36	52.10	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	2.5e-34	48.33	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	2.1e-33	47.49	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 9..167 e-value: 3.5E-68 score: 229.4
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..173
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 108..164 e-value: 1.4E-6 score: 30.5
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 108..162
None	No IPR available	PANTHER	PTHR31675:SF6	AXIAL REGULATOR YABBY 5	coord: 1..173

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g216310	Csor.00g216310	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g216310.m01.CDS06	Csor.00g216310.m01.CDS06	CDS
Csor.00g216310.m01.CDS05	Csor.00g216310.m01.CDS05	CDS
Csor.00g216310.m01.CDS04	Csor.00g216310.m01.CDS04	CDS
Csor.00g216310.m01.CDS03	Csor.00g216310.m01.CDS03	CDS
Csor.00g216310.m01.CDS02	Csor.00g216310.m01.CDS02	CDS
Csor.00g216310.m01.CDS01	Csor.00g216310.m01.CDS01	CDS

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g216310.m01.initial01	Csor.00g216310.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g216310.m01.start_codon01	Csor.00g216310.m01.start_codon01	start_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g216310.m01.intron05	Csor.00g216310.m01.intron05	intron
Csor.00g216310.m01.intron04	Csor.00g216310.m01.intron04	intron
Csor.00g216310.m01.intron03	Csor.00g216310.m01.intron03	intron
Csor.00g216310.m01.intron02	Csor.00g216310.m01.intron02	intron
Csor.00g216310.m01.intron01	Csor.00g216310.m01.intron01	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g216310.m01.internal04	Csor.00g216310.m01.internal04	internal
Csor.00g216310.m01.internal03	Csor.00g216310.m01.internal03	internal
Csor.00g216310.m01.internal02	Csor.00g216310.m01.internal02	internal
Csor.00g216310.m01.internal01	Csor.00g216310.m01.internal01	internal

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g216310.m01.terminal01	Csor.00g216310.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g216310.m01.stop_codon01	Csor.00g216310.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g216310.m01	Csor.00g216310.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0010158	abaxial cell fate specification
cellular_component	GO:0005634	nucleus