Csor.00g178150.m01 (mRNA) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCACATCGATTGCCTAAGAATTCCCCCAAAGCTGCTCTCGGTTTCGACAAGAACTTTGACCACGATGGCCAATGTCTGCATTGCTTGTCCATCTATAATTGGTGCTTACCAGGTGAAATCCGCCGACATGAATGCCATTTAACTCCTTAGTACTCCCATCACTTTATGTTCTAAGTTCTGTAAATGAACGCTATAACCTGCAGGTCTTCTGCCAACCTGTTGTATGGCTTTATGGATAAATGGTGCAGCACAAAGTGGGCAGGAAAGTAAATTCATGACAAAGGAGCACAGTATTAACTTACCTTTTAATGGAGAGTATCAGCTCAACTACTTCCCCATAGAGGTGTACTTAGCAAGAACTAAATTGCCCAGATTCTCTTTCACCTGCATCTGGCCTGAAGATATTGAGCTCGAGCTGGATCCATTCAAGGCTTGGCCCAAGATGTCAAGACATACAAACCCTTCAAAACTTGAACTGATTAGTACAAAATCCTAG ATGGCTGCACATCGATTGCCTAAGAATTCCCCCAAAGCTGCTCTCGGTTTCGACAAGAACTTTGACCACGATGGCCAATGTCTGCATTGCTTGTCCATCTATAATTGGTGCTTACCAGGTCTTCTGCCAACCTGTTGTATGGCTTTATGGATAAATGGTGCAGCACAAAGTGGGCAGGAAAGTAAATTCATGACAAAGGAGCACAGTATTAACTTACCTTTTAATGGAGAGTATCAGCTCAACTACTTCCCCATAGAGGTGTACTTAGCAAGAACTAAATTGCCCAGATTCTCTTTCACCTGCATCTGGCCTGAAGATATTGAGCTCGAGCTGGATCCATTCAAGGCTTGGCCCAAGATGTCAAGACATACAAACCCTTCAAAACTTGAACTGATTAGTACAAAATCCTAG ATGGCTGCACATCGATTGCCTAAGAATTCCCCCAAAGCTGCTCTCGGTTTCGACAAGAACTTTGACCACGATGGCCAATGTCTGCATTGCTTGTCCATCTATAATTGGTGCTTACCAGGTCTTCTGCCAACCTGTTGTATGGCTTTATGGATAAATGGTGCAGCACAAAGTGGGCAGGAAAGTAAATTCATGACAAAGGAGCACAGTATTAACTTACCTTTTAATGGAGAGTATCAGCTCAACTACTTCCCCATAGAGGTGTACTTAGCAAGAACTAAATTGCCCAGATTCTCTTTCACCTGCATCTGGCCTGAAGATATTGAGCTCGAGCTGGATCCATTCAAGGCTTGGCCCAAGATGTCAAGACATACAAACCCTTCAAAACTTGAACTGATTAGTACAAAATCCTAG MAAHRLPKNSPKAALGFDKNFDHDGQCLHCLSIYNWCLPGLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLNYFPIEVYLARTKLPRFSFTCIWPEDIELELDPFKAWPKMSRHTNPSKLELISTKS Homology
BLAST of Csor.00g178150.m01 vs. NCBI nr
Match: KAG6591718.1 (hypothetical protein SDJN03_14064, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024599.1 hypothetical protein SDJN02_13417 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 295 bits (755), Expect = 4.31e-101 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of Csor.00g178150.m01 vs. NCBI nr
Match: XP_038896751.1 (amino acid permease 6-like [Benincasa hispida]) HSP 1 Score: 62.4 bits (150), Expect = 3.29e-08 Identity = 43/120 (35.83%), Postives = 51/120 (42.50%), Query Frame = 0
BLAST of Csor.00g178150.m01 vs. NCBI nr
Match: XP_004136237.1 (amino acid permease 6 [Cucumis sativus] >KAE8651407.1 hypothetical protein Csa_001691 [Cucumis sativus]) HSP 1 Score: 61.2 bits (147), Expect = 8.31e-08 Identity = 42/120 (35.00%), Postives = 51/120 (42.50%), Query Frame = 0
BLAST of Csor.00g178150.m01 vs. NCBI nr
Match: XP_022159715.1 (amino acid permease 6-like [Momordica charantia]) HSP 1 Score: 60.5 bits (145), Expect = 1.55e-07 Identity = 42/120 (35.00%), Postives = 51/120 (42.50%), Query Frame = 0
BLAST of Csor.00g178150.m01 vs. NCBI nr
Match: XP_008466098.1 (PREDICTED: amino acid permease 6 [Cucumis melo] >KAA0038637.1 amino acid permease 6 [Cucumis melo var. makuwa] >TYK31237.1 amino acid permease 6 [Cucumis melo var. makuwa]) HSP 1 Score: 59.7 bits (143), Expect = 2.31e-07 Identity = 42/120 (35.00%), Postives = 50/120 (41.67%), Query Frame = 0
BLAST of Csor.00g178150.m01 vs. ExPASy TrEMBL
Match: A0A0A0LE46 (Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G894480 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.64e-08 Identity = 42/120 (35.00%), Postives = 51/120 (42.50%), Query Frame = 0
BLAST of Csor.00g178150.m01 vs. ExPASy TrEMBL
Match: A0A6J1DZJ0 (amino acid permease 6-like OS=Momordica charantia OX=3673 GN=LOC111026053 PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 7.50e-08 Identity = 42/120 (35.00%), Postives = 51/120 (42.50%), Query Frame = 0
BLAST of Csor.00g178150.m01 vs. ExPASy TrEMBL
Match: A0A5A7TAP3 (Amino acid permease 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005250 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.12e-07 Identity = 42/120 (35.00%), Postives = 50/120 (41.67%), Query Frame = 0
BLAST of Csor.00g178150.m01 vs. ExPASy TrEMBL
Match: A0A1S3CQR5 (amino acid permease 6 OS=Cucumis melo OX=3656 GN=LOC103503623 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.12e-07 Identity = 42/120 (35.00%), Postives = 50/120 (41.67%), Query Frame = 0
BLAST of Csor.00g178150.m01 vs. ExPASy TrEMBL
Match: A0A6J1FRQ3 (amino acid permease 6-like OS=Cucurbita moschata OX=3662 GN=LOC111446640 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.89e-07 Identity = 41/120 (34.17%), Postives = 50/120 (41.67%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following initial feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following terminal feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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