Csor.00g172300.m01 (mRNA) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAACATTGGGAAAGGCAATTTACACCGTCGGATTCTGGATCCGGGAGACCGGTCAAGCCCTCGATCGTCTTGGTTGCCGCCTCCAAGGGAATTACTACTTTCAAGAACAACGTAACCTTCTTAATTTCCACTTTCTACTCTATTATCTTCCAAGTCTCACTATGCTATTAATGTTGTTATTGTTTTCCCACCGATTTTCATTTGGTGTTATCATTTGCGGTCTTCGATGTAATGGAAATATATCTTGATGTGTATTATTACGTTTGCCTTGTATGGACATTCGAACGAGAGTTTTGTTGGTTGGAGATTAAGAGAAGGCATGATCTTAGATATTGTATTGTGATTTTCGACTTGTAGATATGAACTGTTTTAGTCTCTTATCATTGCTTAAGAGGAATGTGCATTTGTGTTTAGTGTTTGTTTGGTGAAACTGCCTCTGTGGGGGACGGTGTTGATTTTTAGGTTATGGTATTCGTCAGTTTAGGCTGTTCATCAGGTAATCTTTCAGAATACAGCACCATAAATTTAGAGAGCTTATGTTAGACATTAATTGTTGAGAACTTCACTTTAGGAAGCAGTAAAAGTTCACCATCATCATCTGTTATTCCCAAGGATTAAAATATCGATGTCGATCTTAATATTGGTATTTCAATTTTACATATATATGGATAAATTTTTGTTATTGGTGGATACTTCTGTAAGTCTTGTTAAATTAATAATTAAGTTGTTTCTACTTCAAAACTCAGTTGATAAATCTTGTTATTAGTATTCATACTCATATTGAGATTAATAGATGAGATTCTTTTATGTTTTATGTACGTTCATAAAAGATATTGGAGATATTGATTAATCCTTAATATCAATGTCGAACCATCCGAGTTAAAGATATATCGACATCTGAATAGATATTTCAATCATTGATTATTCCGTAATCTGAGGGTTATAGTAGTTTGTTTGTACACGTTTTAGCTGTTTGGATTTAACTTGAATCCATCTTTTGTTGTGTGATAATGCATCCTTTTGTCACTCCTTTTTTTTCTTTTTAACTTGCACCTCCTATACTGAGAACTCCAATGTCAAAGAAAATAGATTACAAACTAAAGACTGTTGCAAAACACTTGCAAACAAGGGCTGTTGCAAAATGCTTCTTAGAAAGACACGAAAAATGCAAATAGCAAAACAATGCTGGTGCATTATGTTTTGCTATGATTTCCCACCATCTCGTGGAGGGAAACCTTTGCCGCCCATTGCACCACCTCTATTACAAAAGCCACCACACCCACAACCACCTTTATTACCACTTATACGCCAGCAATGACCTCCACCATCAGTTTAAAATTCAATTTTGGTCATGTATATATTCAGTACTTGACTGAGGTTTTGTTATATACACTGCCAAATTGTATATGCCTTGGAGTTGAACCGTTGTTTTTGCTGTGCTCGGCTTTTGGTTTGAATTCTCTATAAGTAAATTATTCAAATGACATTATCTAATTCTGATTCTTATTTCTTTAGTATCTAGGCATAGGACGCTCATGAACATATTTGACAAGGCTCCTGTGGTTGACAAGGATGCATTTGTGGCGCCTAGTGCATCTATCATTGGTGATGTGCAGGTGGGACGGGGTTCCTCCATTTGGTATGGGTGTGTTTTGAGAGGTAAGCTTAACATTAGCCTATTTGAAGATGTTCATGTTGTTTCATTCCCTATATTTGGTAGTATGTTGATTTTGATGTCCCCCCCCCCCAAGATAGTTTTTCCAATTTCCAAAGTTCCTTAATGTGGACTTTACTCCTCATCAAATAGTGTTTAATAGTATTCATCCATTAATCTTGACGTGAAATTTCAATGTTATTTGGCTCTTGAAATTCATTTGATGGAATAATTTGCATGCCTGTTGAAGTAATGGTCATCCAGTTCTGGAGAAAATCCGATGAAAGCATGTTTGGTACTAAAATGTTTCAAAATATAATATTCTGAACAGTACTATAAGGCAAGAATATTAGAAGAAAAAGGCTGAAGATGAAATGTTTGTGATTTTTAGGTTAATACTGGTGCTTCGTTATTGATTTTTAGGTCAATGCCATTTCAGTGAGTGTAGTGAAATTTTAGGTTCTAGGTTGTGCCTAAGCATGAGGTCTTGCAACAATTGAAACTCAGTTTGCTGTATTCTTGCTTGTTAGCAATTACCAATGTTTGTGTTCCTACGACCTATCACTATCAGGAATAGGACTTTTTTAGGGGAACATAACTGGTGTTTTTTCTGAGAAAAATAACCACACTTTTGAATGCAAATAGTAAATAACTCTACTCTTCTTATTGCCTAAATTTGTTTGAGTGAGAACTGTTTTTTTACCAGGTAACAACCATTTATCAGTAATTTGTTTGACCAGTTTGCTTTCCCTATCTTCTTCTTTCGCACCATTTGTTCATATTTGTCTAACTGCAAAATATCATGAAGGTGATGTTAACAGCATTAGTGTTGGTTCCGGGACCAACATACAAGACAACTCTTTAGTTCACGTAGCAAAATCCAATTTGAGTGGAAAGGTTTTACCAACGATCATTGGAGATAATGTTACTGTTGGTGAGTGATTTAATCTTGTCTAAAACGATATTAGTATCTATCACTCGATGTGTATGTGTTATGGTTTCAAATTTGAACTGGACAGGTCACAGTGCTGTGTTACATGGATGTACTATTGAGGACGAGGCATTTGTGGGGATGGGAGCAACATTGCTTGATGGAGTCTTCGTCGAAAAACATGCAATGGTTGCTGCTGGAGCACTTGTGAGGCAGAATACAAGGATCCCATGCGGAGAGGTCTCTCAATACTATCATTTTACTTTGTATCAGTGTATTTATCGGTCTTGAAATTTATAGTCAAATTGATACGGCTGTTACTTGACTCCCACAATTCTAGGATTGATGGCGCAATTCACCATTCTCCAATGGAAAATTGCTCTTGTTTGTTTATGTGATTGAGAGAATGGTAGTTAGGAAGAGTATTAAAGGGATTGGGTCAAGTGTGTGAGCTGATCTGTTTTGAGGTGTGGGTTCATGTAGTTACTAGTTTTTTATGATGTGGGTAAGATGTGTGCAAAAAAGAATATACACTTAGAGTGATGAGCGGGGTCGTTTTGGCTTTTTGCCGAAGTCTTGGAAGGAGAGTGTGAGATCTCTGAATCGTCCCTTGGATACGAACCCTTCTCCATTCTATAAACTAATTTGCTTCTATCATGTTTGAAATAAATTATTAACTATTAGTAGTGCAATCACAGGTATGGGGAGGCAATCCGGCCAAATTCCTGAGGAAGCTTACAGAAGAAGAGATGGCCTTTATCTCCCAGTCAGCCATTAATTATTCGAACTTATCACAGGTTCATGCAGCTGAAAACGTAAAGAGCTTTGACGAAATTGAATTCGAAAAGGTTCTTCGCAAGAAGTTTGCTCGTCGTGATGAAGAGTATGATTCAATGCTGGGCGTTGTTCGTGAAACCCCCCCAGAGCTCACTCTTCCAGATAATATACTAGCCAACAAAGTACCAAAATCTTCTTAAGACATTTTCTTAATGTAGGCACATAAAAATTCTTCCCCTTTCAAATGTCGAGTTGATAAAAGACGAGACTTTCATCTCAAATAATTTATGGAGGTTGGATGAAAGAGCGAGTGCCAGTAATCACGGACAACGTCCTCTGGCCACAGCTCGAGTCAATCATCTTCTCCAAAACCCCATTTTTCTTCATCTTGAGAAATCAGGTACTACAATGAGACATCATTACTTTGGATGCTTTAATCATCTTGAATCCATTCTTGAATATTTCATTGGCTGTTACTAGTTGGAAATAAATAAACTAAGGAGGCTTCCTGATTCTTTCTCATAGATCAAACTCTGAATCGAAACAGGGAGCTAATCTTTGTTTGGGAGTGTTTGATGCTTGTCTGA ATGGGAACATTGGGAAAGGCAATTTACACCGTCGGATTCTGGATCCGGGAGACCGGTCAAGCCCTCGATCGTCTTGGTTGCCGCCTCCAAGGGAATTACTACTTTCAAGAACAACTATCTAGGCATAGGACGCTCATGAACATATTTGACAAGGCTCCTGTGGTTGACAAGGATGCATTTGTGGCGCCTAGTGCATCTATCATTGGTGATGTGCAGGTGGGACGGGGTTCCTCCATTTGGTATGGGTGTGTTTTGAGAGGTGATGTTAACAGCATTAGTGTTGGTTCCGGGACCAACATACAAGACAACTCTTTAGTTCACGTAGCAAAATCCAATTTGAGTGGAAAGGTTTTACCAACGATCATTGGAGATAATGTTACTGTTGGTCACAGTGCTGTGTTACATGGATGTACTATTGAGGACGAGGCATTTGTGGGGATGGGAGCAACATTGCTTGATGGAGTCTTCGTCGAAAAACATGCAATGGTTGCTGCTGGAGCACTTGTGAGGCAGAATACAAGGATCCCATGCGGAGAGGTATGGGGAGGCAATCCGGCCAAATTCCTGAGGAAGCTTACAGAAGAAGAGATGGCCTTTATCTCCCAGTCAGCCATTAATTATTCGAACTTATCACAGGTTCATGCAGCTGAAAACGTAAAGAGCTTTGACGAAATTGAATTCGAAAAGGTTCTTCGCAAGAAGTTTGCTCGTCGTGATGAAGAGCACATAAAAATTCTTCCCCTTTCAAATGTCGAGTTGATAAAAGACGAGACTTTCATCTCAAATAATTTATGGAGGTTGGATGAAAGAGCGAGTGCCAGTAATCACGGACAACGTCCTCTGGCCACAGCTCGAGTCAATCATCTTCTCCAAAACCCCATTTTTCTTCATCTTGAGAAATCAGATCAAACTCTGAATCGAAACAGGGAGCTAATCTTTGTTTGGGAGTGTTTGATGCTTGTCTGA ATGGGAACATTGGGAAAGGCAATTTACACCGTCGGATTCTGGATCCGGGAGACCGGTCAAGCCCTCGATCGTCTTGGTTGCCGCCTCCAAGGGAATTACTACTTTCAAGAACAACTATCTAGGCATAGGACGCTCATGAACATATTTGACAAGGCTCCTGTGGTTGACAAGGATGCATTTGTGGCGCCTAGTGCATCTATCATTGGTGATGTGCAGGTGGGACGGGGTTCCTCCATTTGGTATGGGTGTGTTTTGAGAGGTGATGTTAACAGCATTAGTGTTGGTTCCGGGACCAACATACAAGACAACTCTTTAGTTCACGTAGCAAAATCCAATTTGAGTGGAAAGGTTTTACCAACGATCATTGGAGATAATGTTACTGTTGGTCACAGTGCTGTGTTACATGGATGTACTATTGAGGACGAGGCATTTGTGGGGATGGGAGCAACATTGCTTGATGGAGTCTTCGTCGAAAAACATGCAATGGTTGCTGCTGGAGCACTTGTGAGGCAGAATACAAGGATCCCATGCGGAGAGGTATGGGGAGGCAATCCGGCCAAATTCCTGAGGAAGCTTACAGAAGAAGAGATGGCCTTTATCTCCCAGTCAGCCATTAATTATTCGAACTTATCACAGGTTCATGCAGCTGAAAACGTAAAGAGCTTTGACGAAATTGAATTCGAAAAGGTTCTTCGCAAGAAGTTTGCTCGTCGTGATGAAGAGCACATAAAAATTCTTCCCCTTTCAAATGTCGAGTTGATAAAAGACGAGACTTTCATCTCAAATAATTTATGGAGGTTGGATGAAAGAGCGAGTGCCAGTAATCACGGACAACGTCCTCTGGCCACAGCTCGAGTCAATCATCTTCTCCAAAACCCCATTTTTCTTCATCTTGAGAAATCAGATCAAACTCTGAATCGAAACAGGGAGCTAATCTTTGTTTGGGAGTGTTTGATGCTTGTCTGA MGTLGKAIYTVGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPVVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTIEDEAFVGMGATLLDGVFVEKHAMVAAGALVRQNTRIPCGEVWGGNPAKFLRKLTEEEMAFISQSAINYSNLSQVHAAENVKSFDEIEFEKVLRKKFARRDEEHIKILPLSNVELIKDETFISNNLWRLDERASASNHGQRPLATARVNHLLQNPIFLHLEKSDQTLNRNRELIFVWECLMLV Homology
BLAST of Csor.00g172300.m01 vs. ExPASy Swiss-Prot
Match: Q9FWR5 (Gamma carbonic anhydrase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA1 PE=1 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 7.5e-119 Identity = 213/275 (77.45%), Postives = 237/275 (86.18%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. ExPASy Swiss-Prot
Match: Q9C6B3 (Gamma carbonic anhydrase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA2 PE=1 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 2.3e-112 Identity = 192/249 (77.11%), Postives = 230/249 (92.37%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. ExPASy Swiss-Prot
Match: Q94AU7 (Gamma carbonic anhydrase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA3 PE=1 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 3.2e-109 Identity = 191/246 (77.64%), Postives = 216/246 (87.80%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. ExPASy Swiss-Prot
Match: Q54JC2 (Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0288155 PE=1 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 4.5e-47 Identity = 98/238 (41.18%), Postives = 148/238 (62.18%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. ExPASy Swiss-Prot
Match: Q57752 (Uncharacterized protein MJ0304 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0304 PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 4.8e-33 Identity = 71/159 (44.65%), Postives = 104/159 (65.41%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. NCBI nr
Match: KAG6577223.1 (Gamma carbonic anhydrase 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 641 bits (1653), Expect = 7.68e-232 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. NCBI nr
Match: KAG7015315.1 (Gamma carbonic anhydrase 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 485 bits (1249), Expect = 4.44e-171 Identity = 246/267 (92.13%), Postives = 254/267 (95.13%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. NCBI nr
Match: XP_022929178.1 (gamma carbonic anhydrase 1, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 483 bits (1244), Expect = 2.56e-170 Identity = 245/267 (91.76%), Postives = 253/267 (94.76%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. NCBI nr
Match: XP_038890583.1 (gamma carbonic anhydrase 1, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 481 bits (1237), Expect = 2.99e-169 Identity = 239/246 (97.15%), Postives = 244/246 (99.19%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. NCBI nr
Match: XP_023553178.1 (gamma carbonic anhydrase 1, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 479 bits (1234), Expect = 8.55e-169 Identity = 243/267 (91.01%), Postives = 253/267 (94.76%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. ExPASy TrEMBL
Match: A0A6J1ERC7 (gamma carbonic anhydrase 1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435854 PE=4 SV=1) HSP 1 Score: 483 bits (1244), Expect = 1.24e-170 Identity = 245/267 (91.76%), Postives = 253/267 (94.76%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. ExPASy TrEMBL
Match: A0A6J1J749 (gamma carbonic anhydrase 1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111483164 PE=4 SV=1) HSP 1 Score: 478 bits (1231), Expect = 1.19e-168 Identity = 243/264 (92.05%), Postives = 250/264 (94.70%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. ExPASy TrEMBL
Match: A0A0A0KWN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046620 PE=4 SV=1) HSP 1 Score: 477 bits (1227), Expect = 4.82e-168 Identity = 237/246 (96.34%), Postives = 242/246 (98.37%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. ExPASy TrEMBL
Match: A0A5D3CXP6 (Gamma carbonic anhydrase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005040 PE=4 SV=1) HSP 1 Score: 475 bits (1223), Expect = 1.96e-167 Identity = 237/246 (96.34%), Postives = 243/246 (98.78%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. ExPASy TrEMBL
Match: A0A1S3BU69 (gamma carbonic anhydrase 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493202 PE=4 SV=1) HSP 1 Score: 475 bits (1223), Expect = 1.96e-167 Identity = 237/246 (96.34%), Postives = 243/246 (98.78%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. TAIR 10
Match: AT1G19580.1 (gamma carbonic anhydrase 1 ) HSP 1 Score: 428.3 bits (1100), Expect = 5.3e-120 Identity = 213/275 (77.45%), Postives = 237/275 (86.18%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. TAIR 10
Match: AT1G47260.1 (gamma carbonic anhydrase 2 ) HSP 1 Score: 406.8 bits (1044), Expect = 1.7e-113 Identity = 192/249 (77.11%), Postives = 230/249 (92.37%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. TAIR 10
Match: AT5G66510.1 (gamma carbonic anhydrase 3 ) HSP 1 Score: 396.4 bits (1017), Expect = 2.3e-110 Identity = 191/246 (77.64%), Postives = 216/246 (87.80%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. TAIR 10
Match: AT5G66510.2 (gamma carbonic anhydrase 3 ) HSP 1 Score: 387.9 bits (995), Expect = 8.0e-108 Identity = 191/257 (74.32%), Postives = 216/257 (84.05%), Query Frame = 0
BLAST of Csor.00g172300.m01 vs. TAIR 10
Match: AT1G19580.2 (gamma carbonic anhydrase 1 ) HSP 1 Score: 331.6 bits (849), Expect = 6.8e-91 Identity = 157/179 (87.71%), Postives = 170/179 (94.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following initial feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following internal feature(s) are a part of this mRNA:
The following terminal feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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