Csor.00g148250.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g148250.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DNA-damage-repair/toleration protein DRT111, chloroplastic-like
Location	Csor_Chr14: 5858069 .. 5864237 (+)
Sequence length	1221
RNA-Seq Expression	Csor.00g148250.m01
Synteny	Csor.00g148250.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGGTGGATTGTACGGAGACCTCCCTCCGCCCTCTTCGGCGGAGGAAGATAAGCCCGCCAATTCTACCGTCTGGTCGAGCAGCACAAAAATGGCGCCACCGACTCTACGCAAGCCATCGTCCGTTTTCGCGCCACAGACTGTTCTCAGATCTCAAAGCAAAATCAAAGCTGCCAACTTGGCGCACTCGAAGGCTTCAGTGTCCGAGCCGGTGGAGCAGTCTCTGCCGATTCTGGCTGAGGCTATTACGCAACCGGCGTTGGTGGCCGTGACGTCTTCGGTTGTAGAAGAGTATGATCCAGCGAGGCCGAATGACTACGAGGAGTATCGGGCGGAGAAGAACAGGAAGGCCAAGGAGGCTGAGATGAGAAAGGAGCTCGAGAGACGTAGACAAGAGGAGGAAGAGAGGGAGAAGAAGGAGCGAGAGGAGCGAGATAGAGAGTATTCCGATTCTAGGATAAATATTTCAGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCAAGATCACCATCGCCACCAAGTAGCGGAGACGGATTTACCATTGGAAAGTCGGAAACTGGCGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACAGCGGCTCAAAGAATGATGGCTAAGATGGGGTGGAAGGAGGGGCAAGGGCTCGGGAAGCAAGAACAAGGTATCACCACCCCTCTGATGGCAAAAAAGACAGACCTGCGTGCTGGAGTAATCGTGAACGCTAATGATACGAAATCAGAGAAGAAGGTGAAGAGTGTCAACTTCAACGGACAACCTACTCGGGTTCTCCTGCTCAGAAACATGGTACGACGTTGTAGAATTCTGACATTTTGATGATTTGAAATGAATTTTAGGTAGCGGAGTTTGTTTTCGGTGCATTAGAATTTTAGTAGTTCTTTCCCGTTTGTCAGATTTCCATTAAACTTCAGAAATTCTTGGTTAGATAGGAGCAATCTAGACAGGTTTAACGTAACCAATCATATCATTCTCTCATAATTGCTGTTGGATGATGAAAGTCTCACATCGGCTAATTTAGGGAATGATCATTGGTTTATAAACAAAGAACACTCTCTCCATTGGTATGAGGCCTTTTGGGGAAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACATGGTATCAAAGTCATGACCTAAACTTAGTCGTGCTTGGTAAATCCTCAAATGTCGAACAAAGGACTCCAAAAGAAAAGGAGTCAAGCCTCCTCGAAGGCAGTGAAAAATGACTAAGACTTCAAAGGAGTCGAGTCTCGATTAAGGAGAGGTGTACTTTGTTCGATGGGAGGTGTTGGATGATGAAAGTCCCACATTGGCTAATTTAGGGAATAATCATGAGTTTATAAACAAAGAATACTCTCTCTATTGGTATGAGGCCTTTTGGGGAAGCCCAAAACAAAGCAATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACAGTTGCAAATTCCATTATTAGCACGCGATTCTTCTGTTAATCCATCATTAAAATGCATGCACTTGAGAATTTGTTTGATTGTCCATATTGTGATGAAAGTTCTATTCCTAATCCTAACCTTGGTATCTTTAGCTGCTTGCCCATTGGTGTACACTTATCCAGTTTTCATGTTAGACTACGAAGGCGGAAGGATTGTTAGTTTCTAGTATTGTCGCTGTCAGCGCCAGATGGCATTTTTTATCAGCTAATTGCTCAACCAGTTCTTTATAAATCGTTGTTATCCGAAAGTTTTCTTTCCCTGTACTACTGAGTGCTAATCAGAAGGAATAAGATATGGACTAAAAAACCCTTAGTTGCAATTTGCATATAGAGTTCTTCTTGTTTGGAAAATTTTAGAGGGAAAAACATTAAATCATAGATTATTAGTCTATCTGGAAACAAATTAAAAGGCAGAGAACGTACAAACCTTTACTCGCGTGATTTGTATAGAGATGCCTTCATCAATGTTACATCTTTTGCTAGATCATTTTAGGTTTTAAGTTTATTATATACCATATCAGAGATTAAAAATCTACCCCGAGGGAGGTGAGGTGAGGTGGGGAGGAGGATGAAGGTCTATATAGCATGTTCTAGGGGTTGTACGAATATCAAGGCATACCATATTTGGTTTTCTGATTTTATTGAATTTGATTCATTGTTATATTAAGTTGACGAATGTCATCTTACTGGTTGGATATAAAGTATTAGCTAACTGGAATATTGCTACTGGCCTCTAGAAGATGGAAGGTTGGATTAGGCAACTTAAGGAAGAGAAGTGAGGCAATACTACAGAGAAGCTCTGGAGATATGCTAAAGAAAGTTATGAGATGTGCAGTAAGCTGGTTATGAACAAATATGGACGTGAAGAAGGAAGAAAATAGGAAGTTTCCTCTAGAAATGAAATTTGGTTGTTTTCAAAGCCTTTCGTGGTGACGCTATCAATTTCTGAGCAAAAAAGCTGGGAAGCTTAGAAGGAACTTCTCTCTAGGCTGATGTTACGAAGCCATTGTTTAGGGATTATGAACTCAAAGAAATTGAATATTATTAGGAATAGATTAGTTCAAAGAAATAGGGGTTAGGGCTTAGAGTTGGGATCTATCAGAACTGCATAATTCTTGTCCTAACCATGCTTCCGTCTGTAATGAACTAAGAAGGGTTTTTTTTTTTTTTTTTTTTTTTATTCTCTCTGTCTTTACGTTCTTCAATTGACTCACTCCTCAGTTTTGCCCGTAAGCTAGTATGTAATAATCGAAGGGTCTATAATTGCCAAAACAATTTCTTTTGGTATCAGTGGCAAACATGTATTTTGGTTGGTAACCAAATGTTTTGGGTTTGACACTGTAGGGGCTTTAATGAAGTTGGTTGGTAAAGAGGAACTGGGTACTACTACTGGACTATAAGTTGATTTCAAGATTATCAAAAGCTGTTATTTTCTATGTTCTATTTTGTAAACCTCCCTTTTGGATATGAGTTTAATACAGCTTATTTATTTGATCATAGAGGTCGTTTGAACATCTTATGTGAGAATATTTATTCGTGAGAAAGACCAGTATTTGTAAATAGCATGTGGAGTTTCCTGACAAATCTATGACGGAACTTGTAAATATAAAAGAAAAAACAATATATATATTTCCAATTATTACTTACTCTAAGAGTCTTGTTACACATGGCTGAACCTCTCCCTCCCTCCCTCCCTCCGAATTGTGAATCTAGGTTATGGTTTAATGTCATTAAATAATTTAGGGTTATAGTGGGTTAATCTTGATTTCATAAAAAATGCCATTGAACAATTTAGATTAGTGGGTTAGTTAATCTTAAAAAAAAGTTTAATCCTTCATCCACAAGGCCTATCTATACATGCTATACATGAGTGTAGCATGTATCAGTAAGGCCTGCGAACAATTTTATCCTTGAGGATATCTAAATGATTGAGCTTGATGATTGAAGCATTTTTTATATTTATACTATAGAAAGGATTGCATTTTTCTTCAGTCGTCTAAAGGATATAATTTGTGATTTTTATCTTGAAGGTGGGCCCCGGCGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCCGAGTGTGCAAAGTATGGGACAGTAACAAGAGTTCTGATATTTGAGATCACAGAACCCAATTTTCCAGTGGAAGAGGCTGTTCGAATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACTAAGGCTTTGGTTGATCTTGGAGGTCGTTACTTCGGGGGAAGAGTGGTTCAAGCTACATTTTATGATGAGGAAAGGTTCAGTAAGAATGAATTAGCTCCAATGCCAGGAGAAATCCCTGGATTTACATGAATTCCGATTGGATTGGATAGGATTGTGCTATAACTTTCCTGTTGTAAGCACGTGATGTTGTGGACTCAATAGTTTCTTTGCAGTCATTATGAGAATCTCTCTTTTTACTTGTGACAGACTGAATGATGGCGCACTTGGTAAGCCACATTAACCATCCAATATAAACCCCTTCGATGAATTCATTGGTCTGTCATAGAACTTTTTTCTTCTATGCATGCATCTGTCTCTTAATAGAAGCTTGCCAATTTTATCTTATTTGCTTTCTTCCAGATTCAATTATGTCTTGACTGAACAGTTTCAACTAAGATTGTAATTTGATTTCATTAGTAAAATTGAGAGACTAACAGCGACCCTACTTGCTGCATGTACAGCACACACACCGATGACTCTGGGCGTTCTTTCAGGCTGCAAGCGGATTATCATTGGGCTTTTACGGTAATTTTAGGTCGAGACTTGTGTTTTTTAATTATTAAAAAATGAAAAACCAGAACTTATCTTGTGCTTAAACTTTCAAGCTTTCTTAATGTGTTGGATTATGGGTGAAATTCTTGCTTGGTTCTTATGTTGATTGAGAAATATTTTTACAGTATAAATTTATATATTGCTGGTTTGTTGGGGTAAATTTTGAATAGAAGTGAGATAATTTCTGACATCTTAACTCCTTGCTTTATTAATTCAATCCTTTTTAAACTGGAAATCAAACAGCCTGTTTTACTGAACTGAGAAGAAGATGAAGAAACAAACACAGTAATTATTACATCTGTTAAAATAGGTTGGACCAGTCAATGGTGAATTAAATGGGGGAAGGGGTTGATTTGAAAAACCCTATGGATTATAGAGTCTAAGCAACATGATAAGGTCTAGTCTCCCTCCCTAAACTCGAACAAAATCTTACAACGGCTGCAACACAAAATCTTAAAACAGCTGCAATTCCAGAGAAAAACTACATGGATTGCAAACCCTAGCCCTCTCCCCTAGGGTTTACAAAAGTTCAGATTCATAGATTCTCTCTCTCCCCACCACACTTCTTTATTGAATTTTGATGCTTTCTTTGCACTTTAATGCCTTTCCCTTTGGGACTGGCTGGGCCGCGCTGGGAGCGCTATTGAAGGGAAAGCTGCCCTTGAAAATGGTGTCCTTGGAATACAACCAAACTATACTTTCAGAAGTTCCCACTCCCTTCCCAACACTTTAACTCAATTTCTCTCTTTACGCAAAGGCCACTTCTGCGTTAACCTGCGAGTATTTGTAACTTCATAACATAGGCGTCATTTTTAGAAGCCTTATCAAGCATCATTTTAAAAATCACAAGGAGTTTATCATCATTAAAGATGATTTTTTTATATAAAGACAAAGCCATAGATATATATACTTTGTAGTCCCATAAATTTTACTTAAAAAAATTTGAATACAATCATAATTTCTCTTCGAACAAATCAATAAGCATACCCAAATGGGGAACAAAAAGGGTTAAGTTCTGAGAGAAAGCATGGCATGGGACTGGGCATTAGAGGCGAATCAATGGCTGTAGACCAAGTCTGCACCAAAAACATAGTTAATTTGAATAATTTGCATTAGTTTTTTTTTTTTTTGTGGGAAAAACTGCGAAAGAGACTGGCAGCAGTCTCGAAATTACAGTTCACAGTACCTTTGTACACATTCTTCCCCCTCCATCTTTTACTGTATCAGAAAAAAAGTGACAAACATTTTTAAAATATCATTGAAATAATTACACATTAAAAATATTAATAATTTATTTCTGGGAATACCCAATGAGAGGTTGGCAAAAACCATTCCATCAAAAAATGTATTACAAAAAAGTAGAACTACAAAGAGAAAGTAATATGAAAAGTTAAAGTGTGATTAGACCTTCCAAAATCCCATCCTTGTTTGGTTAGAGAAAAAATGGAAAGGAAAGGTAGGAAAAACCAAAACAGGAAGATCCTTGTCTTCTCTGCTCTGTTTCAAAGATCATCATTATAGGTAGAATGGACTGATTTTACGCCCACCGCCCCCTGTCAAAATAGCGTGTAGTTATGGCTTAGGGAATGGAAGAGGGAGTTCTGCTTAGCTCGCCTAGGTGTATCTTCTTACCATAAATGAAGATTGATGCTCAACCCCTTCCTGCTTCTGGCCCTCCTCATTAATAAGCTGCTGTTAAAGACTGTTGTGTTTGTTAAGCCATGAACTGCCCATTACTCAACTCTTTTACTTGTTTTGGTGCAGTGGCTGTGGCTGTGGCTGGTGCTTCCACCCTTGA

mRNA sequence

ATGCTGGGTGGATTGTACGGAGACCTCCCTCCGCCCTCTTCGGCGGAGGAAGATAAGCCCGCCAATTCTACCGTCTGGTCGAGCAGCACAAAAATGGCGCCACCGACTCTACGCAAGCCATCGTCCGTTTTCGCGCCACAGACTGTTCTCAGATCTCAAAGCAAAATCAAAGCTGCCAACTTGGCGCACTCGAAGGCTTCAGTGTCCGAGCCGGTGGAGCAGTCTCTGCCGATTCTGGCTGAGGCTATTACGCAACCGGCGTTGGTGGCCGTGACGTCTTCGGTTGTAGAAGAGTATGATCCAGCGAGGCCGAATGACTACGAGGAGTATCGGGCGGAGAAGAACAGGAAGGCCAAGGAGGCTGAGATGAGAAAGGAGCTCGAGAGACGTAGACAAGAGGAGGAAGAGAGGGAGAAGAAGGAGCGAGAGGAGCGAGATAGAGAGTATTCCGATTCTAGGATAAATATTTCAGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCAAGATCACCATCGCCACCAAGTAGCGGAGACGGATTTACCATTGGAAAGTCGGAAACTGGCGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACAGCGGCTCAAAGAATGATGGCTAAGATGGGGTGGAAGGAGGGGCAAGGGCTCGGGAAGCAAGAACAAGGTATCACCACCCCTCTGATGGCAAAAAAGACAGACCTGCGTGCTGGAGTAATCGTGAACGCTAATGATACGAAATCAGAGAAGAAGGTGAAGAGTGTCAACTTCAACGGACAACCTACTCGGGTTCTCCTGCTCAGAAACATGGTGGGCCCCGGCGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCCGAGTGTGCAAAGTATGGGACAGTAACAAGAGTTCTGATATTTGAGATCACAGAACCCAATTTTCCAGTGGAAGAGGCTGTTCGAATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACTAAGGCTTTGGTTGATCTTGGAGGTCGTTACTTCGGGGGAAGAGTGGTTCAAGCTACATTTTATGATGAGGAAAGGTTCATCATTATGAGAATCTCTCTTTTTACTTGTGACAGACTGAATGATGGCGCACTTGCACACACACCGATGACTCTGGGCGTTCTTTCAGGCTGCAAGCGGATTATCATTGGGCTTTTACGTGGCTGTGGCTGTGGCTGGTGCTTCCACCCTTGA

Coding sequence (CDS)

ATGCTGGGTGGATTGTACGGAGACCTCCCTCCGCCCTCTTCGGCGGAGGAAGATAAGCCCGCCAATTCTACCGTCTGGTCGAGCAGCACAAAAATGGCGCCACCGACTCTACGCAAGCCATCGTCCGTTTTCGCGCCACAGACTGTTCTCAGATCTCAAAGCAAAATCAAAGCTGCCAACTTGGCGCACTCGAAGGCTTCAGTGTCCGAGCCGGTGGAGCAGTCTCTGCCGATTCTGGCTGAGGCTATTACGCAACCGGCGTTGGTGGCCGTGACGTCTTCGGTTGTAGAAGAGTATGATCCAGCGAGGCCGAATGACTACGAGGAGTATCGGGCGGAGAAGAACAGGAAGGCCAAGGAGGCTGAGATGAGAAAGGAGCTCGAGAGACGTAGACAAGAGGAGGAAGAGAGGGAGAAGAAGGAGCGAGAGGAGCGAGATAGAGAGTATTCCGATTCTAGGATAAATATTTCAGGCGAGGAAGCTTGGAGAAGGCGCGCGGCGAAGAGTGGGGCAATACCAAGATCACCATCGCCACCAAGTAGCGGAGACGGATTTACCATTGGAAAGTCGGAAACTGGCGGGTTGGGAGTTGGTGCTGGTGGGCAGATGACAGCGGCTCAAAGAATGATGGCTAAGATGGGGTGGAAGGAGGGGCAAGGGCTCGGGAAGCAAGAACAAGGTATCACCACCCCTCTGATGGCAAAAAAGACAGACCTGCGTGCTGGAGTAATCGTGAACGCTAATGATACGAAATCAGAGAAGAAGGTGAAGAGTGTCAACTTCAACGGACAACCTACTCGGGTTCTCCTGCTCAGAAACATGGTGGGCCCCGGCGAGGTAGATGATGAGCTAGAAGAGGAAGTAGGATCCGAGTGTGCAAAGTATGGGACAGTAACAAGAGTTCTGATATTTGAGATCACAGAACCCAATTTTCCAGTGGAAGAGGCTGTTCGAATTTTTGTGCAGTTTGAAAGATCAGAAGAAACGACTAAGGCTTTGGTTGATCTTGGAGGTCGTTACTTCGGGGGAAGAGTGGTTCAAGCTACATTTTATGATGAGGAAAGGTTCATCATTATGAGAATCTCTCTTTTTACTTGTGACAGACTGAATGATGGCGCACTTGCACACACACCGATGACTCTGGGCGTTCTTTCAGGCTGCAAGCGGATTATCATTGGGCTTTTACGTGGCTGTGGCTGTGGCTGGTGCTTCCACCCTTGA

Protein sequence

MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAANLAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKEAEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPSSGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERFIIMRISLFTCDRLNDGALAHTPMTLGVLSGCKRIIIGLLRGCGCGWCFHP

Homology

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BLAST of Csor.00g148250.m01 vs. ExPASy Swiss-Prot
Match: P42698 (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT111 PE=1 SV=2)

HSP 1 Score: 461.5 bits (1186), Expect = 1.0e-128
Identity = 264/377 (70.03%), Postives = 298/377 (79.05%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPP+  E+    +S+VWSSSTKMAPPTLRKP +   PQT+LR  +K K   
Sbjct: 1   MLGGLYGDLPPPTDDEKPSGNSSSVWSSSTKMAPPTLRKPPAFAPPQTILRPLNKPKPIV 60

Query: 61  LA--------HSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRA 120
            A        +S  SV  P  +S P       QPALV VTSSV+EEYDPARPNDYEEY+ 
Sbjct: 61  SAPYKPPPPSNSSQSVLIPANESAP-----SHQPALVGVTSSVIEEYDPARPNDYEEYKR 120

Query: 121 EKNRKAKEAEMRKELERRRQEEEEREKKEREERDRE-----YSDSRINISGEEAWRRRAA 180
           EK RKA EAEM++E+++RRQE+EER+K+EREER++E        SR+NISGEEAW+RRAA
Sbjct: 121 EKKRKATEAEMKREMDKRRQEDEERDKREREEREKERERDNSDPSRLNISGEEAWKRRAA 180

Query: 181 K----SGAIPRSPSPPSSGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGK 240
                SG   RS SPP + DGF+IGKSET GLGVGAGGQMTAAQRMMAKMGWK+GQGLGK
Sbjct: 181 MSGGGSGGKGRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQGLGK 240

Query: 241 QEQGITTPLMAKKTDLRAGVIVNANDTKS----EKKVKSVNFNGQPTRVLLLRNMVGPGE 300
            EQGITTPLMAKKTD RAGVIVNA++ KS    +K VKSVN NG+PTRVLLLRNMVGPG+
Sbjct: 241 SEQGITTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPTRVLLLRNMVGPGQ 300

Query: 301 VDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGR 357
           VDDELE+EVG EC KYGTVTRVLIFEITEPNFPV EAVRIFVQF R EETTKALVDL GR
Sbjct: 301 VDDELEDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVDLDGR 360

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BLAST of Csor.00g148250.m01 vs. ExPASy Swiss-Prot
Match: Q96I25 (Splicing factor 45 OS=Homo sapiens OX=9606 GN=RBM17 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.5e-34
Identity = 141/408 (34.56%), Postives = 207/408 (50.74%), Query Frame = 0


Query: 5   LYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLR-KPSSVFAPQTVLRSQSKIKA--ANL 64
           LY DL       E   + +  WS + K+    L+ K +++   ++    QS + A   +L
Sbjct: 3   LYDDL-----GVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQSTVLAPVIDL 62

Query: 65  AHSKASVSEPVEQSLPILAEAITQPALVAVTSSVV-----EEYDPARPNDYEEYRAEKNR 124
               +S    +  + P +A  +  P     ++  V     +EYDP  PNDYE+      R
Sbjct: 63  KRGGSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKV---VKR 122

Query: 125 KAKEAEMRKELERRRQ-EEEEREKKEREERD----REYSDSRINISGEEAWRRRAAKSGA 184
           + +E + ++ELER+++ EE E+ +K+R E      R   DS  +   E   R+R+    A
Sbjct: 123 QREERQRQRELERQKEIEEREKRRKDRHEASGFARRPDPDSDEDEDYERERRKRSMGGAA 182

Query: 185 I------------------------PRSPS-----PPSSGDGFTIGKSETG---GLGVGA 244
           I                        PRS S     PP   +     +S TG         
Sbjct: 183 IAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPSNSFLANM 242

Query: 245 GGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDTKSEKKVKS- 304
           GG  T A ++M K G++EGQGLGK EQG++T L  +KT  R G I+  + T+ +   KS 
Sbjct: 243 GG--TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDASKKSD 302

Query: 305 ----VNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVE 363
                     PT+V+LLRNMVG GEVD++LE E   EC KYG V + +IFEI  P  P +
Sbjct: 303 SNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PGAPDD 362

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BLAST of Csor.00g148250.m01 vs. ExPASy Swiss-Prot
Match: Q8JZX4 (Splicing factor 45 OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-33
Identity = 142/412 (34.47%), Postives = 208/412 (50.49%), Query Frame = 0


Query: 5   LYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLR-KPSSVFAPQTVLRSQSKIKA--ANL 64
           LY DL       E   + +  WS + K+    L+ K +++   ++    QS + A   +L
Sbjct: 3   LYDDL-----GVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQSTVLAPVIDL 62

Query: 65  AHSKASVSEPVEQSLPILAEAITQPALVAVTSSVV-----EEYDPARPNDYEEYRAEKNR 124
               +S    +  + P +A  +  P     ++  V     +EYDP  PNDYE+      R
Sbjct: 63  KRGGSSDDRQIADTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKV---VKR 122

Query: 125 KAKEAEMRKELERRRQ-EEEEREKKEREERD----REYSDSRINISGEEAWRRRAAKSGA 184
           + +E + ++ELER+++ EE E+ +K+R E      R   DS  +   E   R+R+    A
Sbjct: 123 QREERQRQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAA 182

Query: 185 I------------------------PRSPS-----PPSSGDGFTIGKSETG---GLGVGA 244
           I                        PRS S     PP   +     +S TG         
Sbjct: 183 IAPPTSLVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEPDRPRSPTGPSNSFLANM 242

Query: 245 GGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLRAGVIVNANDT-KSEKKVKS 304
           GG  T A ++M K G++EGQGLGK EQG++T L  +KT  R G I+  + T K E +  S
Sbjct: 243 GG--TVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKGEAQDAS 302

Query: 305 VNFNGQ--------PTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITEPN 363
              +          PT+V+LLRNMVG GEVD++LE E   EC KYG V + +IFEI  P 
Sbjct: 303 KKSDSNPLTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEI--PG 362

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BLAST of Csor.00g148250.m01 vs. ExPASy Swiss-Prot
Match: Q2HJG2 (Poly(U)-binding-splicing factor PUF60 OS=Bos taurus OX=9913 GN=PUF60 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.8e-17
Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 264 QPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITE-PNFPVEEAVRIFVQ 323
           Q + V++LRNMV P ++DD+LE EV  EC K+G V RV+I++  +      E  V+IFV+
Sbjct: 430 QESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVE 489

Query: 324 FERSEETTKALVDLGGRYFGGRVVQATFYDEERF 357
           F  + ET KA+ DL GR+F GR V A  YD+ERF
Sbjct: 490 FSVASETHKAIQDLNGRWFAGRKVVAEVYDQERF 523

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BLAST of Csor.00g148250.m01 vs. ExPASy Swiss-Prot
Match: Q3UEB3 (Poly(U)-binding-splicing factor PUF60 OS=Mus musculus OX=10090 GN=Puf60 PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 2.8e-17
Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 264 QPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTRVLIFEITE-PNFPVEEAVRIFVQ 323
           Q + V++LRNMV P ++DD+LE EV  EC K+G V RV+I++  +      E  V+IFV+
Sbjct: 464 QESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVE 523

Query: 324 FERSEETTKALVDLGGRYFGGRVVQATFYDEERF 357
           F  + ET KA+  L GR+FGGR V A  YD+ERF
Sbjct: 524 FSMASETHKAIQALNGRWFGGRKVVAEVYDQERF 557

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BLAST of Csor.00g148250.m01 vs. NCBI nr
Match: KAG6581470.1 (DNA-damage-repair/toleration protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 775 bits (2002), Expect = 3.69e-282
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60

Query: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120
           LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE
Sbjct: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120

Query: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERFIIMR 360
           VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERFIIMR
Sbjct: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERFIIMR 360

Query: 361 ISLFTCDRLNDGALAHTPMTLGVLSGCKRIIIGLLRGCGCGWCFHP 406
           ISLFTCDRLNDGALAHTPMTLGVLSGCKRIIIGLLRGCGCGWCFHP
Sbjct: 361 ISLFTCDRLNDGALAHTPMTLGVLSGCKRIIIGLLRGCGCGWCFHP 406

[Close]

BLAST of Csor.00g148250.m01 vs. NCBI nr
Match: XP_022925977.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita moschata] >XP_022925978.1 DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita moschata] >KAG7034760.1 DNA-damage-repair/toleration protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 666 bits (1719), Expect = 1.36e-239
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60

Query: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120
           LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE
Sbjct: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120

Query: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356
           VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF
Sbjct: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356

[Close]

BLAST of Csor.00g148250.m01 vs. NCBI nr
Match: XP_022978020.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 665 bits (1716), Expect = 3.89e-239
Identity = 355/356 (99.72%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60

Query: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120
           LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE
Sbjct: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120

Query: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPP+
Sbjct: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPN 180

Query: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356
           VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF
Sbjct: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356

[Close]

BLAST of Csor.00g148250.m01 vs. NCBI nr
Match: XP_023543834.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 662 bits (1708), Expect = 6.43e-238
Identity = 353/356 (99.16%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQS++KAAN
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSRMKAAN 60

Query: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120
           LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE
Sbjct: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120

Query: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERDREYS+SRINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREERDREYSNSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356
           VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF
Sbjct: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356

[Close]

BLAST of Csor.00g148250.m01 vs. NCBI nr
Match: XP_022146691.1 (DNA-damage-repair/toleration protein DRT111, chloroplastic [Momordica charantia])

HSP 1 Score: 627 bits (1618), Expect = 3.27e-224
Identity = 334/356 (93.82%), Postives = 343/356 (96.35%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSK+KAA 
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKVKAAT 60

Query: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120
             H KAS S  VEQS PILAEAITQPALVAVTS+VVEEYDPARPNDYEEYR EK RKA E
Sbjct: 61  STHPKASASASVEQSQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRMEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREER+R+YSDSR+NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREERERDYSDSRLNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 AADGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356
           VLIFEITEPNFPV+EAVRIFVQFERSEETTKALVDL GRYFGGRVV+ATFYDEERF
Sbjct: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERF 356

[Close]

BLAST of Csor.00g148250.m01 vs. ExPASy TrEMBL
Match: A0A6J1ED37 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433232 PE=4 SV=1)

HSP 1 Score: 666 bits (1719), Expect = 6.58e-240
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60

Query: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120
           LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE
Sbjct: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120

Query: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356
           VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF
Sbjct: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356

[Close]

BLAST of Csor.00g148250.m01 vs. ExPASy TrEMBL
Match: A0A6J1INW6 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478133 PE=4 SV=1)

HSP 1 Score: 665 bits (1716), Expect = 1.88e-239
Identity = 355/356 (99.72%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60

Query: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120
           LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE
Sbjct: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120

Query: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPP+
Sbjct: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPN 180

Query: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356
           VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF
Sbjct: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356

[Close]

BLAST of Csor.00g148250.m01 vs. ExPASy TrEMBL
Match: A0A6J1D044 (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015835 PE=4 SV=1)

HSP 1 Score: 627 bits (1618), Expect = 1.58e-224
Identity = 334/356 (93.82%), Postives = 343/356 (96.35%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSK+KAA 
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKVKAAT 60

Query: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120
             H KAS S  VEQS PILAEAITQPALVAVTS+VVEEYDPARPNDYEEYR EK RKA E
Sbjct: 61  STHPKASASASVEQSQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRMEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREER+R+YSDSR+NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREERERDYSDSRLNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           + DGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 AADGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356
           VLIFEITEPNFPV+EAVRIFVQFERSEETTKALVDL GRYFGGRVV+ATFYDEERF
Sbjct: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERF 356

[Close]

BLAST of Csor.00g148250.m01 vs. ExPASy TrEMBL
Match: A0A6J1KSL4 (DNA-damage-repair/toleration protein DRT111, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496883 PE=4 SV=1)

HSP 1 Score: 622 bits (1603), Expect = 3.05e-222
Identity = 330/356 (92.70%), Postives = 341/356 (95.79%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPPSSAEEDKP+NSTVWSSSTKMAPPTLRKPSSVFAP TVLRSQSK+K A 
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPSNSTVWSSSTKMAPPTLRKPSSVFAPPTVLRSQSKVKPAT 60

Query: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120
             H KASVS PVE S PILAEAITQPALVAVTS+V+EEYDPARPNDYEEYR EK RKA E
Sbjct: 61  STHPKASVSAPVEPSQPILAEAITQPALVAVTSTVIEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREER+REYSDSR+NISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREEREREYSDSRLNISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           +GDGF+IGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 TGDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVN NG PTRVL+LRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNINGLPTRVLMLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356
           VLIFEITEPNFPV+EAVRIFVQFERSEETTKALVDL GRYFGGRVV+ATFYDEERF
Sbjct: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERF 356

[Close]

BLAST of Csor.00g148250.m01 vs. ExPASy TrEMBL
Match: A0A0A0KP45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525420 PE=4 SV=1)

HSP 1 Score: 621 bits (1602), Expect = 4.33e-222
Identity = 334/356 (93.82%), Postives = 340/356 (95.51%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPPSSAEEDKP NSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAA 
Sbjct: 1   MLGGLYGDLPPPSSAEEDKPTNSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAT 60

Query: 61  LAHSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRAEKNRKAKE 120
             H K SVS  VE S PILAEAITQPALVAVTS+VVEEYDPARPNDYEEYR EK RKA E
Sbjct: 61  STHPKVSVSTQVEASQPILAEAITQPALVAVTSTVVEEYDPARPNDYEEYRVEKKRKAME 120

Query: 121 AEMRKELERRRQEEEEREKKEREERDREYSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180
           AEMRKELERRRQEEEEREKKEREER+RE+SDSRINISGEEAWRRRAAKSGAIPRSPSPPS
Sbjct: 121 AEMRKELERRRQEEEEREKKEREEREREHSDSRINISGEEAWRRRAAKSGAIPRSPSPPS 180

Query: 181 SGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240
           S DGF+IGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR
Sbjct: 181 SVDGFSIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDLR 240

Query: 241 AGVIVNANDTKSEKKVKSVNFNGQPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300
           AGVIVNANDTKSEKKVKSVNFNG PTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR
Sbjct: 241 AGVIVNANDTKSEKKVKSVNFNGLPTRVLLLRNMVGPGEVDDELEEEVGSECAKYGTVTR 300

Query: 301 VLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 356
           VLIFEITEPNFPV+EAVRIFVQFERSEETTKALVDL GRYFGGRVV+ATFYDEERF
Sbjct: 301 VLIFEITEPNFPVDEAVRIFVQFERSEETTKALVDLDGRYFGGRVVRATFYDEERF 356

[Close]

BLAST of Csor.00g148250.m01 vs. TAIR 10
Match: AT1G30480.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 461.5 bits (1186), Expect = 7.2e-130
Identity = 264/377 (70.03%), Postives = 298/377 (79.05%), Query Frame = 0


Query: 1   MLGGLYGDLPPPSSAEEDKPANSTVWSSSTKMAPPTLRKPSSVFAPQTVLRSQSKIKAAN 60
           MLGGLYGDLPPP+  E+    +S+VWSSSTKMAPPTLRKP +   PQT+LR  +K K   
Sbjct: 1   MLGGLYGDLPPPTDDEKPSGNSSSVWSSSTKMAPPTLRKPPAFAPPQTILRPLNKPKPIV 60

Query: 61  LA--------HSKASVSEPVEQSLPILAEAITQPALVAVTSSVVEEYDPARPNDYEEYRA 120
            A        +S  SV  P  +S P       QPALV VTSSV+EEYDPARPNDYEEY+ 
Sbjct: 61  SAPYKPPPPSNSSQSVLIPANESAP-----SHQPALVGVTSSVIEEYDPARPNDYEEYKR 120

Query: 121 EKNRKAKEAEMRKELERRRQEEEEREKKEREERDRE-----YSDSRINISGEEAWRRRAA 180
           EK RKA EAEM++E+++RRQE+EER+K+EREER++E        SR+NISGEEAW+RRAA
Sbjct: 121 EKKRKATEAEMKREMDKRRQEDEERDKREREEREKERERDNSDPSRLNISGEEAWKRRAA 180

Query: 181 K----SGAIPRSPSPPSSGDGFTIGKSETGGLGVGAGGQMTAAQRMMAKMGWKEGQGLGK 240
                SG   RS SPP + DGF+IGKSET GLGVGAGGQMTAAQRMMAKMGWK+GQGLGK
Sbjct: 181 MSGGGSGGKGRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKMGWKQGQGLGK 240

Query: 241 QEQGITTPLMAKKTDLRAGVIVNANDTKS----EKKVKSVNFNGQPTRVLLLRNMVGPGE 300
            EQGITTPLMAKKTD RAGVIVNA++ KS    +K VKSVN NG+PTRVLLLRNMVGPG+
Sbjct: 241 SEQGITTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPTRVLLLRNMVGPGQ 300

Query: 301 VDDELEEEVGSECAKYGTVTRVLIFEITEPNFPVEEAVRIFVQFERSEETTKALVDLGGR 357
           VDDELE+EVG EC KYGTVTRVLIFEITEPNFPV EAVRIFVQF R EETTKALVDL GR
Sbjct: 301 VDDELEDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVDLDGR 360

[Close]

BLAST of Csor.00g148250.m01 vs. TAIR 10
Match: AT4G36690.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-06
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 266 TRVLLLRNMVGPGEVDDELE-----EEVGSECAKYGTVTRVLIFEITEPNFPVEEAVRIF 325
           T V+ L  +V   E+ D+ E     E++  E  K+G +T V+I   +    PV    ++F
Sbjct: 471 TTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVF 530

Query: 326 VQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 357
           +++  ++ +T+A   + GR FGG  V A +Y E++F
Sbjct: 531 LKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKF 566

[Close]

BLAST of Csor.00g148250.m01 vs. TAIR 10
Match: AT4G36690.4 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-06
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 266 TRVLLLRNMVGPGEVDDELE-----EEVGSECAKYGTVTRVLIFEITEPNFPVEEAVRIF 325
           T V+ L  +V   E+ D+ E     E++  E  K+G +T V+I   +    PV    ++F
Sbjct: 449 TTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVF 508

Query: 326 VQFERSEETTKALVDLGGRYFGGRVVQATFYDEERF 357
           +++  ++ +T+A   + GR FGG  V A +Y E++F
Sbjct: 509 LKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKF 544

The following BLAST results are available for this feature:

BLAST of Csor.00g148250.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42698	1.0e-128	70.03	DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thalia...	[more]
Q96I25	1.5e-34	34.56	Splicing factor 45 OS=Homo sapiens OX=9606 GN=RBM17 PE=1 SV=1	[more]
Q8JZX4	1.6e-33	34.47	Splicing factor 45 OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1	[more]
Q2HJG2	2.8e-17	48.94	Poly(U)-binding-splicing factor PUF60 OS=Bos taurus OX=9913 GN=PUF60 PE=2 SV=1	[more]
Q3UEB3	2.8e-17	48.94	Poly(U)-binding-splicing factor PUF60 OS=Mus musculus OX=10090 GN=Puf60 PE=1 SV=...	[more]

BLAST of Csor.00g148250.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581470.1	3.69e-282	100.00	DNA-damage-repair/toleration protein, chloroplastic, partial [Cucurbita argyrosp...	[more]
XP_022925977.1	1.36e-239	100.00	DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita mosch...	[more]
XP_022978020.1	3.89e-239	99.72	DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita maxim...	[more]
XP_023543834.1	6.43e-238	99.16	DNA-damage-repair/toleration protein DRT111, chloroplastic-like [Cucurbita pepo ...	[more]
XP_022146691.1	3.27e-224	93.82	DNA-damage-repair/toleration protein DRT111, chloroplastic [Momordica charantia]	[more]

BLAST of Csor.00g148250.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ED37	6.58e-240	100.00	DNA-damage-repair/toleration protein DRT111, chloroplastic-like OS=Cucurbita mos...	[more]
A0A6J1INW6	1.88e-239	99.72	DNA-damage-repair/toleration protein DRT111, chloroplastic-like OS=Cucurbita max...	[more]
A0A6J1D044	1.58e-224	93.82	DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Momordica charanti...	[more]
A0A6J1KSL4	3.05e-222	92.70	DNA-damage-repair/toleration protein DRT111, chloroplastic-like OS=Cucurbita max...	[more]
A0A0A0KP45	4.33e-222	93.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525420 PE=4 SV=1	[more]

BLAST of Csor.00g148250.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30480.1	7.2e-130	70.03	D111/G-patch domain-containing protein	[more]
AT4G36690.1	2.2e-06	30.21	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]
AT4G36690.4	2.2e-06	30.21	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 110..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..200
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 268..349 e-value: 4.4E-26 score: 102.6
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 200..246 e-value: 1.4E-15 score: 67.8
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 205..244 e-value: 6.0E-17 score: 61.3
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 202..248 score: 15.451051
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 266..352 e-value: 2.4E-25 score: 90.4
IPR040052	Splicing factor 45	PIRSF	PIRSF031066	SPF45	coord: 3..362 e-value: 2.4E-114 score: 380.8
IPR040052	Splicing factor 45	PANTHER	PTHR13288	SPLICING FACTOR 45 SPF45	coord: 1..356
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 267..353 score: 9.336864
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 270..355

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g148250	Csor.00g148250	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g148250.m01.CDS05	Csor.00g148250.m01.CDS05	CDS
Csor.00g148250.m01.CDS04	Csor.00g148250.m01.CDS04	CDS
Csor.00g148250.m01.CDS03	Csor.00g148250.m01.CDS03	CDS
Csor.00g148250.m01.CDS02	Csor.00g148250.m01.CDS02	CDS
Csor.00g148250.m01.CDS01	Csor.00g148250.m01.CDS01	CDS

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g148250.m01.initial01	Csor.00g148250.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g148250.m01.start_codon01	Csor.00g148250.m01.start_codon01	start_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g148250.m01.intron04	Csor.00g148250.m01.intron04	intron
Csor.00g148250.m01.intron03	Csor.00g148250.m01.intron03	intron
Csor.00g148250.m01.intron02	Csor.00g148250.m01.intron02	intron
Csor.00g148250.m01.intron01	Csor.00g148250.m01.intron01	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g148250.m01.internal03	Csor.00g148250.m01.internal03	internal
Csor.00g148250.m01.internal02	Csor.00g148250.m01.internal02	internal
Csor.00g148250.m01.internal01	Csor.00g148250.m01.internal01	internal

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g148250.m01.terminal01	Csor.00g148250.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g148250.m01.stop_codon01	Csor.00g148250.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g148250.m01	Csor.00g148250.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045292	mRNA cis splicing, via spliceosome
biological_process	GO:0043484	regulation of RNA splicing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding