Csor.00g127120.m01 (mRNA) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGTTGGCCATCTCTCGAGATCGGAGCTGCCACTCCGGCGAGAGATCATTCTATTCATGCTCAACGCCGAATCGCACGGCTTTAGCATGCGGAAAATCGGAGCAAATTGGTACACAATCATCAACCCACCACGGTGATCGCCGTCGTGAAATTGGTTGATGACACCGATCGTGGCGGAATCCGACTTTCACGATTCTCGTCCACGCGCTTCTGGTGATTCTAATCTGGTTTCCCGATCCCATCGTTCCGATAGTTTCATTCTACGGGTTCGTCACCAGCGCGTGGAACTATAAATTTCGGTCACGGGGGCTTCTCCCTCATTTCGATTCGAAACTATCGATGTCCGACACCGTCGAAATGGATGAACTGGATGAGGAGTTCGACGGCATGTCGAGCACGAGGTCGCTAGAAGTTGTACGAATGAGGTATGTTAAGTTGAGAGCAATTGGGGTGCGTGTGCAGCACTTATTGGGGGATTTGGCGACTCAAGCCGAGCAGCGGAACGTCGAGCAGCGGAAGAAGAGTGCCGCTCCTCACTGA ATGGTTGTTGGCCATCTCTCGAGATCGGAGCTGCCACTCCGGCGAGAGATCATTCTATTCATGCTCAACGCCGAATCGCACGGCTTTAGCATGCGGAAAATCGGAGCAAATTGCGCGTGGAACTATAAATTTCGGTCACGGGGGCTTCTCCCTCATTTCGATTCGAAACTATCGATGTCCGACACCGTCGAAATGGATGAACTGGATGAGGAGTTCGACGGCATGTCGAGCACGAGGTCGCTAGAAGTTGTACGAATGAGGTATGTTAAGTTGAGAGCAATTGGGGTGCGTGTGCAGCACTTATTGGGGGATTTGGCGACTCAAGCCGAGCAGCGGAACGTCGAGCAGCGGAAGAAGAGTGCCGCTCCTCACTGA ATGGTTGTTGGCCATCTCTCGAGATCGGAGCTGCCACTCCGGCGAGAGATCATTCTATTCATGCTCAACGCCGAATCGCACGGCTTTAGCATGCGGAAAATCGGAGCAAATTGCGCGTGGAACTATAAATTTCGGTCACGGGGGCTTCTCCCTCATTTCGATTCGAAACTATCGATGTCCGACACCGTCGAAATGGATGAACTGGATGAGGAGTTCGACGGCATGTCGAGCACGAGGTCGCTAGAAGTTGTACGAATGAGGTATGTTAAGTTGAGAGCAATTGGGGTGCGTGTGCAGCACTTATTGGGGGATTTGGCGACTCAAGCCGAGCAGCGGAACGTCGAGCAGCGGAAGAAGAGTGCCGCTCCTCACTGA MVVGHLSRSELPLRREIILFMLNAESHGFSMRKIGANCAWNYKFRSRGLLPHFDSKLSMSDTVEMDELDEEFDGMSSTRSLEVVRMRYVKLRAIGVRVQHLLGDLATQAEQRNVEQRKKSAAPH Homology
BLAST of Csor.00g127120.m01 vs. ExPASy Swiss-Prot
Match: Q69T22 (FT-interacting protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=FTIP1 PE=1 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14 Identity = 55/169 (32.54%), Postives = 79/169 (46.75%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. ExPASy Swiss-Prot
Match: Q60EW9 (FT-interacting protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=FTIP7 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 3.3e-14 Identity = 55/169 (32.54%), Postives = 81/169 (47.93%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. ExPASy Swiss-Prot
Match: Q9C8H3 (FT-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=FTIP4 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 7.4e-14 Identity = 54/169 (31.95%), Postives = 80/169 (47.34%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. ExPASy Swiss-Prot
Match: B8XCH5 (Protein QUIRKY OS=Arabidopsis thaliana OX=3702 GN=QKY PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 7.4e-14 Identity = 55/169 (32.54%), Postives = 77/169 (45.56%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. ExPASy Swiss-Prot
Match: Q9M2R0 (FT-interacting protein 3 OS=Arabidopsis thaliana OX=3702 GN=FTIP3 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-13 Identity = 53/164 (32.32%), Postives = 78/164 (47.56%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. NCBI nr
Match: KAG6595486.1 (FT-interacting protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG6595491.1 FT-interacting protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 244 bits (623), Expect = 2.41e-81 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. NCBI nr
Match: KAG6595484.1 (Protein QUIRKY, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164 bits (416), Expect = 3.44e-44 Identity = 97/167 (58.08%), Postives = 101/167 (60.48%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. NCBI nr
Match: KAG7027483.1 (Protein QUIRKY, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162 bits (409), Expect = 3.03e-43 Identity = 96/167 (57.49%), Postives = 100/167 (59.88%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. NCBI nr
Match: XP_022925218.1 (protein QUIRKY isoform X3 [Cucurbita moschata]) HSP 1 Score: 161 bits (408), Expect = 4.11e-43 Identity = 96/167 (57.49%), Postives = 100/167 (59.88%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. NCBI nr
Match: XP_022925217.1 (protein QUIRKY isoform X2 [Cucurbita moschata]) HSP 1 Score: 161 bits (408), Expect = 4.12e-43 Identity = 96/167 (57.49%), Postives = 100/167 (59.88%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. ExPASy TrEMBL
Match: A0A6J1EEK8 (protein QUIRKY isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111432525 PE=3 SV=1) HSP 1 Score: 161 bits (408), Expect = 1.99e-43 Identity = 96/167 (57.49%), Postives = 100/167 (59.88%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. ExPASy TrEMBL
Match: A0A6J1EB69 (protein QUIRKY isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432525 PE=3 SV=1) HSP 1 Score: 161 bits (408), Expect = 2.00e-43 Identity = 96/167 (57.49%), Postives = 100/167 (59.88%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. ExPASy TrEMBL
Match: A0A6J1EBL4 (protein QUIRKY isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432525 PE=3 SV=1) HSP 1 Score: 161 bits (408), Expect = 2.00e-43 Identity = 96/167 (57.49%), Postives = 100/167 (59.88%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. ExPASy TrEMBL
Match: A0A6J1HNJ7 (protein QUIRKY isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465911 PE=3 SV=1) HSP 1 Score: 157 bits (398), Expect = 4.44e-42 Identity = 94/167 (56.29%), Postives = 97/167 (58.08%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. ExPASy TrEMBL
Match: A0A6J1HQT5 (protein QUIRKY isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465911 PE=3 SV=1) HSP 1 Score: 157 bits (398), Expect = 4.44e-42 Identity = 94/167 (56.29%), Postives = 97/167 (58.08%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. TAIR 10
Match: AT5G17980.1 (C2 calcium/lipid-binding plant phosphoribosyltransferase family protein ) HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24 Identity = 65/169 (38.46%), Postives = 86/169 (50.89%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. TAIR 10
Match: AT5G12970.1 (Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein ) HSP 1 Score: 88.6 bits (218), Expect = 3.9e-18 Identity = 60/169 (35.50%), Postives = 84/169 (49.70%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. TAIR 10
Match: AT1G22610.1 (C2 calcium/lipid-binding plant phosphoribosyltransferase family protein ) HSP 1 Score: 87.8 bits (216), Expect = 6.6e-18 Identity = 56/169 (33.14%), Postives = 81/169 (47.93%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. TAIR 10
Match: AT4G11610.1 (C2 calcium/lipid-binding plant phosphoribosyltransferase family protein ) HSP 1 Score: 85.1 bits (209), Expect = 4.3e-17 Identity = 57/169 (33.73%), Postives = 82/169 (48.52%), Query Frame = 0
BLAST of Csor.00g127120.m01 vs. TAIR 10
Match: AT5G48060.1 (C2 calcium/lipid-binding plant phosphoribosyltransferase family protein ) HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15 Identity = 55/168 (32.74%), Postives = 79/168 (47.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following initial feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following terminal feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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