Csor.00g088560.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g088560.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	NAC domain-containing protein
Location	Csor_Chr01: 10007819 .. 10008358 (+)
Sequence length	438
RNA-Seq Expression	Csor.00g088560.m01
Synteny	Csor.00g088560.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAATTAAAGTCGGCGCCGGAGGCCGATTCAGAGCGGCCGAACCTGCCACCGGGGTTCCGGTTCCACCCGACCGACGAGGAGCTGGTGGTTCACTACCTAAAGAAGAAGGCCACTTCACAGCCCTTGCCGGCGGCCATCATCGCCGATGTTGACCTGAACAAGTACGATCCTTGGGAGCTTCCAGGTGTGTTTTTCGCCGGAGTGAGTTCCGTCGACAGAGGCTAAAACTGGGATTTTTAGTAAAATTAGTCAAGTTTTGATTTTTTGTTTGCGGTGAAAATTTCAGCAAAGGCTAATTATGGAGAACAAGAATGGTATTTTTTCAGTCCACGAGATCGAAAGTATCCGAACGGAGCTCGGCCTAATCGAGCCACCGTGTCCGGGTATTGGAAGGCGACAGGAACCGATAAGCCGGTGATCGCTTCGTTAGAAGGGAACCGGAAAGTTGGTGTTAAGAAGGCTTTGGTTTTCTACCATGGAAAGTCACCGAAAGGAATCAAAACCAATTGGATCATGCACGAGTATAACGCTTAG

mRNA sequence

ATGGAGAAATTAAAGTCGGCGCCGGAGGCCGATTCAGAGCGGCCGAACCTGCCACCGGGGTTCCGGTTCCACCCGACCGACGAGGAGCTGGTGGTTCACTACCTAAAGAAGAAGGCCACTTCACAGCCCTTGCCGGCGGCCATCATCGCCGATGTTGACCTGAACAAGTACGATCCTTGGGAGCTTCCAGCAAAGGCTAATTATGGAGAACAAGAATGGTATTTTTTCAGTCCACGAGATCGAAAGTATCCGAACGGAGCTCGGCCTAATCGAGCCACCGTGTCCGGGTATTGGAAGGCGACAGGAACCGATAAGCCGGTGATCGCTTCGTTAGAAGGGAACCGGAAAGTTGGTGTTAAGAAGGCTTTGGTTTTCTACCATGGAAAGTCACCGAAAGGAATCAAAACCAATTGGATCATGCACGAGTATAACGCTTAG

Coding sequence (CDS)

ATGGAGAAATTAAAGTCGGCGCCGGAGGCCGATTCAGAGCGGCCGAACCTGCCACCGGGGTTCCGGTTCCACCCGACCGACGAGGAGCTGGTGGTTCACTACCTAAAGAAGAAGGCCACTTCACAGCCCTTGCCGGCGGCCATCATCGCCGATGTTGACCTGAACAAGTACGATCCTTGGGAGCTTCCAGCAAAGGCTAATTATGGAGAACAAGAATGGTATTTTTTCAGTCCACGAGATCGAAAGTATCCGAACGGAGCTCGGCCTAATCGAGCCACCGTGTCCGGGTATTGGAAGGCGACAGGAACCGATAAGCCGGTGATCGCTTCGTTAGAAGGGAACCGGAAAGTTGGTGTTAAGAAGGCTTTGGTTTTCTACCATGGAAAGTCACCGAAAGGAATCAAAACCAATTGGATCATGCACGAGTATAACGCTTAG

Protein sequence

MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPWELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVKKALVFYHGKSPKGIKTNWIMHEYNA

Homology

[Close]

BLAST of Csor.00g088560.m01 vs. ExPASy Swiss-Prot
Match: Q9LD44 (NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.6e-63
Identity = 112/143 (78.32%), Postives = 125/143 (87.41%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           ME   S+      +PNLPPGFRFHPTDEELVVHYLK+KA S PLP AIIA+VDL K+DPW
Sbjct: 1   MESTDSSGGPPPPQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKA++GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKPV+AS +GN+KVGVK
Sbjct: 61  ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLAS-DGNQKVGVK 120

Query: 121 KALVFYHGKSPKGIKTNWIMHEY 144
           KALVFY GK PKG+K++WIMHEY
Sbjct: 121 KALVFYSGKPPKGVKSDWIMHEY 142

[Close]

BLAST of Csor.00g088560.m01 vs. ExPASy Swiss-Prot
Match: A2YMR0 (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC010 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.5e-62
Identity = 108/140 (77.14%), Postives = 116/140 (82.86%), Query Frame = 0


Query: 4   LKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPWELP 63
           L+   +     P LPPGFRFHPTDEELVVHYLKKKA S PLP  IIA+VDL K+DPWELP
Sbjct: 16  LRRQQQQPGSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELP 75

Query: 64  AKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVKKAL 123
            KAN+GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKP++AS     KVGVKKAL
Sbjct: 76  EKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKAL 135

Query: 124 VFYHGKSPKGIKTNWIMHEY 144
           VFY GK PKG+KTNWIMHEY
Sbjct: 136 VFYRGKPPKGVKTNWIMHEY 155

[Close]

BLAST of Csor.00g088560.m01 vs. ExPASy Swiss-Prot
Match: Q9ZNU2 (NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.1e-61
Identity = 110/144 (76.39%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           ME   S+      +PNLPPGFRFHPTDEELV+HYLK+KA S PLP AIIADVDL K+DPW
Sbjct: 1   MESTDSSGGPPPPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIAS-LEGNRKVGV 120
           ELPAKA++GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKPVI++   G++KVGV
Sbjct: 61  ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGV 120

Query: 121 KKALVFYHGKSPKGIKTNWIMHEY 144
           KKALVFY GK PKG+K++WIMHEY
Sbjct: 121 KKALVFYSGKPPKGVKSDWIMHEY 144

[Close]

BLAST of Csor.00g088560.m01 vs. ExPASy Swiss-Prot
Match: Q8H4S4 (NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC010 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-61
Identity = 106/140 (75.71%), Postives = 116/140 (82.86%), Query Frame = 0


Query: 4   LKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPWELP 63
           L+   +     P LPPGFRFHPTDEELVVHYLKKKA S PLP  IIA+VDL K+DPW+LP
Sbjct: 16  LRRQQQQPGSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLP 75

Query: 64  AKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVKKAL 123
            KAN+GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKP+++S     KVGVKKAL
Sbjct: 76  EKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKAL 135

Query: 124 VFYHGKSPKGIKTNWIMHEY 144
           VFY GK PKG+KTNWIMHEY
Sbjct: 136 VFYRGKPPKGVKTNWIMHEY 155

[Close]

BLAST of Csor.00g088560.m01 vs. ExPASy Swiss-Prot
Match: A0SPJ6 (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM-B2 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 7.2e-61
Identity = 106/136 (77.94%), Postives = 112/136 (82.35%), Query Frame = 0


Query: 8   PEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPWELPAKAN 67
           P      P LPPGFRFHPTDEELVVHYLKKKA   PLP  II +VDL K+DPWELP KA 
Sbjct: 19  PPQQGSAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKAT 78

Query: 68  YGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVKKALVFYH 127
           +GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKP++AS  G  KVGVKKALVFY 
Sbjct: 79  FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYR 138

Query: 128 GKSPKGIKTNWIMHEY 144
           GK PKG+KTNWIMHEY
Sbjct: 139 GKPPKGLKTNWIMHEY 154

[Close]

BLAST of Csor.00g088560.m01 vs. NCBI nr
Match: KAG6607863.1 (NAC transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309 bits (792), Expect = 1.93e-106
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW
Sbjct: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK
Sbjct: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120

Query: 121 KALVFYHGKSPKGIKTNWIMHEYNA 145
           KALVFYHGKSPKGIKTNWIMHEYNA
Sbjct: 121 KALVFYHGKSPKGIKTNWIMHEYNA 145

[Close]

BLAST of Csor.00g088560.m01 vs. NCBI nr
Match: KAG7037393.1 (NAC transcription factor 56, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302 bits (773), Expect = 6.09e-102
Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDL KYDPW
Sbjct: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK
Sbjct: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120

Query: 121 KALVFYHGKSPKGIKTNWIMHEY 143
           KALVFYHGKSPKGIKTNWIMHEY
Sbjct: 121 KALVFYHGKSPKGIKTNWIMHEY 143

[Close]

BLAST of Csor.00g088560.m01 vs. NCBI nr
Match: XP_022941398.1 (LOW QUALITY PROTEIN: NAC transcription factor 56-like [Cucurbita moschata])

HSP 1 Score: 300 bits (769), Expect = 2.84e-101
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDL KYDPW
Sbjct: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK
Sbjct: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120

Query: 121 KALVFYHGKSPKGIKTNWIMHEY 143
           KALVFYHGKSPKGIK+NWIMHEY
Sbjct: 121 KALVFYHGKSPKGIKSNWIMHEY 143

[Close]

BLAST of Csor.00g088560.m01 vs. NCBI nr
Match: XP_023523396.1 (NAC transcription factor 56-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295 bits (756), Expect = 2.89e-99
Identity = 138/143 (96.50%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDL KYDPW
Sbjct: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKANYGEQEWYFFSPRDRKYPNGARPNRAT SGYWKATGT+KPVIASLEGN KVGVK
Sbjct: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122

Query: 121 KALVFYHGKSPKGIKTNWIMHEY 143
           KAL+FYHGKSPKGIKTNWIMHEY
Sbjct: 123 KALIFYHGKSPKGIKTNWIMHEY 145

[Close]

BLAST of Csor.00g088560.m01 vs. NCBI nr
Match: XP_004147807.1 (NAC transcription factor 56 [Cucumis sativus] >KGN59897.1 hypothetical protein Csa_000751 [Cucumis sativus])

HSP 1 Score: 276 bits (706), Expect = 8.32e-91
Identity = 130/143 (90.91%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           ME LKSA E DSERPNLPPGFRFHPTDEELVVHYLKKKATS PLP AIIA+VDL KYDPW
Sbjct: 1   MENLKSAQETDSERPNLPPGFRFHPTDEELVVHYLKKKATSLPLPVAIIAEVDLYKYDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKA+YGEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKPVIAS EGNRKVGVK
Sbjct: 61  ELPAKASYGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIASSEGNRKVGVK 120

Query: 121 KALVFYHGKSPKGIKTNWIMHEY 143
           KALVFY GK PKGIKTNWIMHEY
Sbjct: 121 KALVFYGGKPPKGIKTNWIMHEY 143

[Close]

BLAST of Csor.00g088560.m01 vs. ExPASy TrEMBL
Match: A0A6J1FS04 (LOW QUALITY PROTEIN: NAC transcription factor 56-like OS=Cucurbita moschata OX=3662 GN=LOC111446701 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 1.37e-101
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDL KYDPW
Sbjct: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK
Sbjct: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120

Query: 121 KALVFYHGKSPKGIKTNWIMHEY 143
           KALVFYHGKSPKGIK+NWIMHEY
Sbjct: 121 KALVFYHGKSPKGIKSNWIMHEY 143

[Close]

BLAST of Csor.00g088560.m01 vs. ExPASy TrEMBL
Match: A0A0A0LGE3 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G852460 PE=4 SV=1)

HSP 1 Score: 276 bits (706), Expect = 4.03e-91
Identity = 130/143 (90.91%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           ME LKSA E DSERPNLPPGFRFHPTDEELVVHYLKKKATS PLP AIIA+VDL KYDPW
Sbjct: 1   MENLKSAQETDSERPNLPPGFRFHPTDEELVVHYLKKKATSLPLPVAIIAEVDLYKYDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKA+YGEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKPVIAS EGNRKVGVK
Sbjct: 61  ELPAKASYGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIASSEGNRKVGVK 120

Query: 121 KALVFYHGKSPKGIKTNWIMHEY 143
           KALVFY GK PKGIKTNWIMHEY
Sbjct: 121 KALVFYGGKPPKGIKTNWIMHEY 143

[Close]

BLAST of Csor.00g088560.m01 vs. ExPASy TrEMBL
Match: A0A345BTH2 (NAC8 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 270 bits (691), Expect = 5.57e-91
Identity = 127/143 (88.81%), Postives = 130/143 (90.91%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           ME  KSAPE DS+RPNLPPGFRFHPTDEELVVHYLKKKATS PLP AIIA+VDL KYDPW
Sbjct: 1   MESSKSAPEIDSDRPNLPPGFRFHPTDEELVVHYLKKKATSLPLPVAIIAEVDLYKYDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKA YGE+EWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKPVIA  EGNRKVGVK
Sbjct: 61  ELPAKACYGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIALSEGNRKVGVK 120

Query: 121 KALVFYHGKSPKGIKTNWIMHEY 143
           KALVFY GK PKGIKTNWIMHEY
Sbjct: 121 KALVFYGGKPPKGIKTNWIMHEY 143

[Close]

BLAST of Csor.00g088560.m01 vs. ExPASy TrEMBL
Match: B3SGL4 (NAC domain-containing protein 18-like OS=Cucumis melo OX=3656 GN=JA PE=2 SV=1)

HSP 1 Score: 273 bits (697), Expect = 9.36e-90
Identity = 129/143 (90.21%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           ME  KSA E DSERPNLPPGFRFHPTDEELVVHYLKKKATS PLP AIIA+VDL KYDPW
Sbjct: 1   MENPKSALETDSERPNLPPGFRFHPTDEELVVHYLKKKATSLPLPVAIIAEVDLYKYDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKA+YGEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKPVIAS EGNRKVGVK
Sbjct: 61  ELPAKASYGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIASSEGNRKVGVK 120

Query: 121 KALVFYHGKSPKGIKTNWIMHEY 143
           KALVFY GK PKGIKTNWIMHEY
Sbjct: 121 KALVFYGGKPPKGIKTNWIMHEY 143

[Close]

BLAST of Csor.00g088560.m01 vs. ExPASy TrEMBL
Match: A0A5D3BCC0 (NAC domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002580 PE=4 SV=1)

HSP 1 Score: 273 bits (697), Expect = 9.36e-90
Identity = 129/143 (90.21%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           ME  KSA E DSERPNLPPGFRFHPTDEELVVHYLKKKATS PLP AIIA+VDL KYDPW
Sbjct: 1   MENPKSALETDSERPNLPPGFRFHPTDEELVVHYLKKKATSLPLPVAIIAEVDLYKYDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKA+YGEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKPVIAS EGNRKVGVK
Sbjct: 61  ELPAKASYGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIASSEGNRKVGVK 120

Query: 121 KALVFYHGKSPKGIKTNWIMHEY 143
           KALVFY GK PKGIKTNWIMHEY
Sbjct: 121 KALVFYGGKPPKGIKTNWIMHEY 143

[Close]

BLAST of Csor.00g088560.m01 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 )

HSP 1 Score: 242.7 bits (618), Expect = 1.9e-64
Identity = 112/143 (78.32%), Postives = 125/143 (87.41%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           ME   S+      +PNLPPGFRFHPTDEELVVHYLK+KA S PLP AIIA+VDL K+DPW
Sbjct: 1   MESTDSSGGPPPPQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120
           ELPAKA++GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKPV+AS +GN+KVGVK
Sbjct: 61  ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLAS-DGNQKVGVK 120

Query: 121 KALVFYHGKSPKGIKTNWIMHEY 144
           KALVFY GK PKG+K++WIMHEY
Sbjct: 121 KALVFYSGKPPKGVKSDWIMHEY 142

[Close]

BLAST of Csor.00g088560.m01 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 237.3 bits (604), Expect = 7.9e-63
Identity = 110/144 (76.39%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60
           ME   S+      +PNLPPGFRFHPTDEELV+HYLK+KA S PLP AIIADVDL K+DPW
Sbjct: 1   MESTDSSGGPPPPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPW 60

Query: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIAS-LEGNRKVGV 120
           ELPAKA++GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGTDKPVI++   G++KVGV
Sbjct: 61  ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGV 120

Query: 121 KKALVFYHGKSPKGIKTNWIMHEY 144
           KKALVFY GK PKG+K++WIMHEY
Sbjct: 121 KKALVFYSGKPPKGVKSDWIMHEY 144

[Close]

BLAST of Csor.00g088560.m01 vs. TAIR 10
Match: AT1G61110.1 (NAC domain containing protein 25 )

HSP 1 Score: 224.2 bits (570), Expect = 6.9e-59
Identity = 101/129 (78.29%), Postives = 112/129 (86.82%), Query Frame = 0


Query: 15  PNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPWELPAKANYGEQEWY 74
           P+LPPGFRFHPTDEELVVHYLKKKA S PLP +IIA++DL K+DPWELP+KA++GE EWY
Sbjct: 14  PHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWY 73

Query: 75  FFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVKKALVFYHGKSPKGI 134
           FFSPRDRKYPNG RPNRA  SGYWKATGTDKP+      + KVGVKKALVFY GK PKGI
Sbjct: 74  FFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTC--NSHKVGVKKALVFYGGKPPKGI 133

Query: 135 KTNWIMHEY 144
           KT+WIMHEY
Sbjct: 134 KTDWIMHEY 140

[Close]

BLAST of Csor.00g088560.m01 vs. TAIR 10
Match: AT3G04070.1 (NAC domain containing protein 47 )

HSP 1 Score: 214.9 bits (546), Expect = 4.2e-56
Identity = 96/132 (72.73%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 14  RPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPWELPAKANYGEQEW 73
           R +LPPGFRFHPTDEEL++HYL+KK +S P+P +IIADVD+ K DPW+LPAKA +GE+EW
Sbjct: 7   RSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPFGEKEW 66

Query: 74  YFFSPRDRKYPNGARPNRATVSGYWKATGTDKPV-IASLEG-NRKVGVKKALVFYHGKSP 133
           YFFSPRDRKYPNGARPNRA  SGYWKATGTDK + + + EG +  +G+KKALVFY GK P
Sbjct: 67  YFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALVFYRGKPP 126

Query: 134 KGIKTNWIMHEY 144
           KG+KTNWIMHEY
Sbjct: 127 KGVKTNWIMHEY 138

[Close]

BLAST of Csor.00g088560.m01 vs. TAIR 10
Match: AT3G04070.2 (NAC domain containing protein 47 )

HSP 1 Score: 214.9 bits (546), Expect = 4.2e-56
Identity = 96/132 (72.73%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 14  RPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPWELPAKANYGEQEW 73
           R +LPPGFRFHPTDEEL++HYL+KK +S P+P +IIADVD+ K DPW+LPAKA +GE+EW
Sbjct: 7   RSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPFGEKEW 66

Query: 74  YFFSPRDRKYPNGARPNRATVSGYWKATGTDKPV-IASLEG-NRKVGVKKALVFYHGKSP 133
           YFFSPRDRKYPNGARPNRA  SGYWKATGTDK + + + EG +  +G+KKALVFY GK P
Sbjct: 67  YFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALVFYRGKPP 126

Query: 134 KGIKTNWIMHEY 144
           KG+KTNWIMHEY
Sbjct: 127 KGVKTNWIMHEY 138

The following BLAST results are available for this feature:

BLAST of Csor.00g088560.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LD44	2.6e-63	78.32	NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1	[more]
A2YMR0	6.5e-62	77.14	NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC0...	[more]
Q9ZNU2	1.1e-61	76.39	NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 ...	[more]
Q8H4S4	3.2e-61	75.71	NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]
A0SPJ6	7.2e-61	77.94	NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM...	[more]

BLAST of Csor.00g088560.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607863.1	1.93e-106	100.00	NAC transcription factor, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7037393.1	6.09e-102	99.30	NAC transcription factor 56, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022941398.1	2.84e-101	98.60	LOW QUALITY PROTEIN: NAC transcription factor 56-like [Cucurbita moschata]	[more]
XP_023523396.1	2.89e-99	96.50	NAC transcription factor 56-like [Cucurbita pepo subsp. pepo]	[more]
XP_004147807.1	8.32e-91	90.91	NAC transcription factor 56 [Cucumis sativus] >KGN59897.1 hypothetical protein C...	[more]

BLAST of Csor.00g088560.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FS04	1.37e-101	98.60	LOW QUALITY PROTEIN: NAC transcription factor 56-like OS=Cucurbita moschata OX=3...	[more]
A0A0A0LGE3	4.03e-91	90.91	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G852460 PE=4 SV...	[more]
A0A345BTH2	5.57e-91	88.81	NAC8 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
B3SGL4	9.36e-90	90.21	NAC domain-containing protein 18-like OS=Cucumis melo OX=3656 GN=JA PE=2 SV=1	[more]
A0A5D3BCC0	9.36e-90	90.21	NAC domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Csor.00g088560.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15510.1	1.9e-64	78.32	NAC domain containing protein 2	[more]
AT1G52880.1	7.9e-63	76.39	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT1G61110.1	6.9e-59	78.29	NAC domain containing protein 25	[more]
AT3G04070.1	4.2e-56	72.73	NAC domain containing protein 47	[more]
AT3G04070.2	4.2e-56	72.73	NAC domain containing protein 47	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 140..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31719	NAC TRANSCRIPTION FACTOR 56	coord: 1..144
None	No IPR available	PANTHER	PTHR31719:SF148	NAC TRANSCRIPTION FACTOR 56-LIKE	coord: 1..144
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 18..144 e-value: 9.3E-41 score: 139.7
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 17..145 score: 56.433868
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 26..145 e-value: 1.3E-52 score: 179.7
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 13..144

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g088560	Csor.00g088560	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g088560.m01.CDS02	Csor.00g088560.m01.CDS02	CDS
Csor.00g088560.m01.CDS01	Csor.00g088560.m01.CDS01	CDS

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g088560.m01.initial01	Csor.00g088560.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g088560.m01.start_codon01	Csor.00g088560.m01.start_codon01	start_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g088560.m01.intron01	Csor.00g088560.m01.intron01	intron

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g088560.m01.terminal01	Csor.00g088560.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g088560.m01.stop_codon01	Csor.00g088560.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g088560.m01	Csor.00g088560.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048731	system development
molecular_function	GO:0003677	DNA binding