Csor.00g086380.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g086380.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ribonuclease T(2)
Location	Csor_Chr05: 9900700 .. 9902038 (+)
Sequence length	522
RNA-Seq Expression	Csor.00g086380.m01
Synteny	Csor.00g086380.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGCCGTCGGTTTATTGGGCCTAAAAGCCATCAATTGCATGCGCGACACGTATCGCATTCAGATGTCGGATTTAATGGAGCAAAGAGATATGGACCGTCGGATTTAATGGTTTGCGGGTATCCGATTCGAGGCCGACCCGGATCGGACGGATCCTTTCTTTCTCGCCGATTTCCAAACCTCTTTACGGACGGTGACGACGACGAACACGTGGTATGTGTTCGGTTGGGATGGATGTATTTAAGGCGATGATCACTCTTGCGGTGTTGCTTGGTCGATTTAGCAAATGGATCCATTGTTGTTGCTCTCATTATGAAAGGCGAACCGGAAAGCAATAGTATCACATTTAAAAAAAATTCATCATTAATTAACATCTAAATGAGGTATTAATAATATACTAAAACTGGAGGGGCATTAATTAAGCTAAGGGGGCGGTTCAGTCCTCCTCCTTAAATACCCATTGTCTACTTCTCAACCCTTTACCTCTCAACTCCCTCCCCTTCTCCTTCTCCTTCTCCATTTCCTTCAACCTCATGGGAAATTTCGTAGTTACCTTTTTCCTCTTTTATTTAGCTTTTTCATCTGTACAAGCTAAATTCCAAGAGGTCGAGCGACCTAAACCTAAACCTAAACCTAAGTATCAATATGAATACTTTCAAATGGTACAGCAATGGCCGCAGTCCATTTGTAATAGTGAGCATTGTATAGGTAAGCCTAAAGCTATGTTCACCATTCATGGGCTCTGGCCCCAAAATTACTCTACTTCACTTATTTGCAACGGGTCTCAGTTCGCCGACGAATATGTAAGTTTTTTTTTAATAATAATAATATTATTATTATTACCGTCTAGGTATAGATGAGTATTTGATGCTTTTTATATATATATTTTTTCTTTACTCAGATCAAATCAATTAGAGAGCAGCTAAATCTATATTGGCCAACCCTATTGTTTAAAGATAACAAATCATTTTGTAATCATGAATGGATGATTCACGGTGAGTGTTCAGACCCACCCTTTAACCCATTTCAGTATTTTCAGAAAACTCTGAAAATCCGAAAAACCTACGATTTATTAGCCATTCTCAATGCTGCGGGACTTGGACCAACTACTGCTGCCCTTCGTAACCGTGATGACATAGAAAAAGCAATTGGAGCTGCAATAGGACAAAAGCCAGTTCTAAAATGCAACACTAACACCAGGACAAGAGACCGCCAACTATCGGAAGTTGTTTTATGCCTTGATGAAGATGGTGTGAAGTTAATTGATTGTGCTAAATTTGTTAGCACCAATTGCCCTCTTACTTTTTCATGGCCCCCTTTTGTTGCTAGTGAGTAA

mRNA sequence

ATGTTGGGCCGTCGGTTTATTGGGCCTAAAAGCCATCAATTGCATGCGCGACACGTATCGCATTCAGATGTCGGATTTAATGGAGCAAAGAGATATGGACCGTCGGATTTAATGGTTTGCGGGTATCCGATTCGAGGCCGACCCGGATCGGACGGATCCTTTCTTTCTCGCCGATTTCCAAACCTCTTTACGGACGGTGACGACGACGAACACGTGTATTTTCAGAAAACTCTGAAAATCCGAAAAACCTACGATTTATTAGCCATTCTCAATGCTGCGGGACTTGGACCAACTACTGCTGCCCTTCGTAACCGTGATGACATAGAAAAAGCAATTGGAGCTGCAATAGGACAAAAGCCAGTTCTAAAATGCAACACTAACACCAGGACAAGAGACCGCCAACTATCGGAAGTTGTTTTATGCCTTGATGAAGATGGTGTGAAGTTAATTGATTGTGCTAAATTTGTTAGCACCAATTGCCCTCTTACTTTTTCATGGCCCCCTTTTGTTGCTAGTGAGTAA

Coding sequence (CDS)

ATGTTGGGCCGTCGGTTTATTGGGCCTAAAAGCCATCAATTGCATGCGCGACACGTATCGCATTCAGATGTCGGATTTAATGGAGCAAAGAGATATGGACCGTCGGATTTAATGGTTTGCGGGTATCCGATTCGAGGCCGACCCGGATCGGACGGATCCTTTCTTTCTCGCCGATTTCCAAACCTCTTTACGGACGGTGACGACGACGAACACGTGTATTTTCAGAAAACTCTGAAAATCCGAAAAACCTACGATTTATTAGCCATTCTCAATGCTGCGGGACTTGGACCAACTACTGCTGCCCTTCGTAACCGTGATGACATAGAAAAAGCAATTGGAGCTGCAATAGGACAAAAGCCAGTTCTAAAATGCAACACTAACACCAGGACAAGAGACCGCCAACTATCGGAAGTTGTTTTATGCCTTGATGAAGATGGTGTGAAGTTAATTGATTGTGCTAAATTTGTTAGCACCAATTGCCCTCTTACTTTTTCATGGCCCCCTTTTGTTGCTAGTGAGTAA

Protein sequence

MLGRRFIGPKSHQLHARHVSHSDVGFNGAKRYGPSDLMVCGYPIRGRPGSDGSFLSRRFPNLFTDGDDDEHVYFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE

Homology

[Close]

BLAST of Csor.00g086380.m01 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 4.0e-10
Identity = 39/124 (31.45%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 49  GSDGSFLSRRFPNLFTDGDD---DEHVYFQKTLKIRKTYDLLAILNAAGLGPTTAALRNR 108
           GS  +F S  +    T  +    ++H YF+K L ++   DLL+IL  A + P   +  + 
Sbjct: 109 GSGSTFWSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHPDGESY-DL 168

Query: 109 DDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFS 168
            +I  AI +AIG  P ++CN + ++ + QL +V +C+D  G  LI+C  F    C  +  
Sbjct: 169 VNIRNAIKSAIGYTPWIQCNVD-QSGNSQLYQVYICVDGSGSSLIECPIFPGGKCGTSIE 228

Query: 169 WPPF 170
           +P F
Sbjct: 229 FPTF 230

[Close]

BLAST of Csor.00g086380.m01 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.9e-08
Identity = 33/101 (32.67%), Postives = 53/101 (52.48%), Query Frame = 0


Query: 69  DEHVYFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNT 128
           D+H YFQ  L +++  +LL  L  AG+ P   +  + + I  +I  +IG  P ++CN + 
Sbjct: 132 DQHEYFQTALNLKQKTNLLGALTKAGINPDGKSY-SLESIRDSIKESIGFTPWVECNRD- 191

Query: 129 RTRDRQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPF 170
            + + QL +V LC+D  G  LI+C  F    C     +P F
Sbjct: 192 GSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEFPSF 230

[Close]

BLAST of Csor.00g086380.m01 vs. NCBI nr
Match: KAG6599325.1 (Intracellular ribonuclease LX, partial [Cucurbita argyrosperma subsp. sororia] >KAG6599327.1 Intracellular ribonuclease LX, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 361 bits (926), Expect = 5.89e-126
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MLGRRFIGPKSHQLHARHVSHSDVGFNGAKRYGPSDLMVCGYPIRGRPGSDGSFLSRRFP 60
           MLGRRFIGPKSHQLHARHVSHSDVGFNGAKRYGPSDLMVCGYPIRGRPGSDGSFLSRRFP
Sbjct: 1   MLGRRFIGPKSHQLHARHVSHSDVGFNGAKRYGPSDLMVCGYPIRGRPGSDGSFLSRRFP 60

Query: 61  NLFTDGDDDEHVYFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKP 120
           NLFTDGDDDEHVYFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKP
Sbjct: 61  NLFTDGDDDEHVYFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKP 120

Query: 121 VLKCNTNTRTRDRQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE 173
           VLKCNTNTRTRDRQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE
Sbjct: 121 VLKCNTNTRTRDRQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE 173

[Close]

BLAST of Csor.00g086380.m01 vs. NCBI nr
Match: XP_023546907.1 (ribonuclease MC-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 207 bits (526), Expect = 3.42e-64
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 73  YFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRD 132
           YFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRD
Sbjct: 132 YFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRD 191

Query: 133 RQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE 173
           RQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE
Sbjct: 192 RQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE 232

[Close]

BLAST of Csor.00g086380.m01 vs. NCBI nr
Match: XP_022946024.1 (ribonuclease MC-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 207 bits (526), Expect = 3.65e-64
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 73  YFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRD 132
           YFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRD
Sbjct: 134 YFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRD 193

Query: 133 RQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE 173
           RQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE
Sbjct: 194 RQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE 234

[Close]

BLAST of Csor.00g086380.m01 vs. NCBI nr
Match: XP_023546908.1 (ribonuclease MC-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177 bits (449), Expect = 6.97e-53
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 88  AILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGV 147
           AILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGV
Sbjct: 120 AILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGV 179

Query: 148 KLIDCAKFVSTNCPLTFSWPPFVASE 173
           KLIDCAKFVSTNCPLTFSWPPFVASE
Sbjct: 180 KLIDCAKFVSTNCPLTFSWPPFVASE 205

[Close]

BLAST of Csor.00g086380.m01 vs. NCBI nr
Match: XP_022946025.1 (ribonuclease MC-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 177 bits (449), Expect = 7.41e-53
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 88  AILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGV 147
           AILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGV
Sbjct: 122 AILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGV 181

Query: 148 KLIDCAKFVSTNCPLTFSWPPFVASE 173
           KLIDCAKFVSTNCPLTFSWPPFVASE
Sbjct: 182 KLIDCAKFVSTNCPLTFSWPPFVASE 207

[Close]

BLAST of Csor.00g086380.m01 vs. ExPASy TrEMBL
Match: A0A6J1G2M1 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111450236 PE=3 SV=1)

HSP 1 Score: 207 bits (526), Expect = 1.76e-64
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 73  YFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRD 132
           YFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRD
Sbjct: 134 YFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRD 193

Query: 133 RQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE 173
           RQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE
Sbjct: 194 RQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPFVASE 234

[Close]

BLAST of Csor.00g086380.m01 vs. ExPASy TrEMBL
Match: A0A6J1G2M7 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111450236 PE=3 SV=1)

HSP 1 Score: 177 bits (449), Expect = 3.59e-53
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 88  AILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGV 147
           AILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGV
Sbjct: 122 AILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGV 181

Query: 148 KLIDCAKFVSTNCPLTFSWPPFVASE 173
           KLIDCAKFVSTNCPLTFSWPPFVASE
Sbjct: 182 KLIDCAKFVSTNCPLTFSWPPFVASE 207

[Close]

BLAST of Csor.00g086380.m01 vs. ExPASy TrEMBL
Match: A0A6J1F837 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111441728 PE=3 SV=1)

HSP 1 Score: 107 bits (268), Expect = 1.32e-25
Identity = 53/98 (54.08%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 73  YFQKTLKIRK--TYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRT 132
           YFQ TL IR   +YDLL ILNAAGLGP+   +R   DIE AI AA G+KP L+CN N ++
Sbjct: 125 YFQITLNIRTNHSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNINAQS 184

Query: 133 RDR-QLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWP 167
           +++ QL E++LC D+DG+ LIDC +F    CP  F WP
Sbjct: 185 KEKKQLLEIILCFDKDGITLIDCTEFAGITCPPQFVWP 222

[Close]

BLAST of Csor.00g086380.m01 vs. ExPASy TrEMBL
Match: A0A6J1EXD5 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1)

HSP 1 Score: 105 bits (262), Expect = 2.19e-24
Identity = 52/96 (54.17%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 73  YFQKTLKIRKT--YDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNTRT 132
           YFQ TL IR    YDLLAILN AGLGPT    R    IE AI AA G+KP L+CN N ++
Sbjct: 121 YFQTTLNIRTNHNYDLLAILNTAGLGPTATNTRQYGAIEGAIQAATGKKPGLRCNKNAQS 180

Query: 133 RDRQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSW 166
           + +QL E++LC D++GV LIDC +F    CP  F W
Sbjct: 181 KKKQLFEIILCFDKNGVTLIDCTQFAGITCPSQFVW 216

[Close]

BLAST of Csor.00g086380.m01 vs. ExPASy TrEMBL
Match: A0A6J1IAR7 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111472844 PE=3 SV=1)

HSP 1 Score: 105 bits (261), Expect = 3.32e-24
Identity = 56/122 (45.90%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 49  GSDGSFLSRRFPNLFTDGDD--DEHVYFQKTLKIRKT--YDLLAILNAAGLGPTTAALRN 108
           G++  F    + N  T  D   ++  YFQ TL IR    YDLLAILN AGLGPT    R 
Sbjct: 96  GNNQRFWKHEWDNHGTCSDPPFNQLQYFQTTLNIRTNHNYDLLAILNTAGLGPTATTTRQ 155

Query: 109 RDDIEKAIGAAIGQKPVLKCNTNTRTRDRQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTF 166
              IE AI AA G+KP L+CN N +++ +QL E++LC D++GV LI+C +F    CP  F
Sbjct: 156 YQAIEGAIQAATGKKPGLRCNKNAQSKRKQLFEIILCFDKNGVTLINCTQFAGITCPSQF 215

[Close]

BLAST of Csor.00g086380.m01 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 33/101 (32.67%), Postives = 53/101 (52.48%), Query Frame = 0


Query: 69  DEHVYFQKTLKIRKTYDLLAILNAAGLGPTTAALRNRDDIEKAIGAAIGQKPVLKCNTNT 128
           D+H YFQ  L +++  +LL  L  AG+ P   +  + + I  +I  +IG  P ++CN + 
Sbjct: 132 DQHEYFQTALNLKQKTNLLGALTKAGINPDGKSY-SLESIRDSIKESIGFTPWVECNRD- 191

Query: 129 RTRDRQLSEVVLCLDEDGVKLIDCAKFVSTNCPLTFSWPPF 170
            + + QL +V LC+D  G  LI+C  F    C     +P F
Sbjct: 192 GSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEFPSF 230

The following BLAST results are available for this feature:

BLAST of Csor.00g086380.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P80022	4.0e-10	31.45	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P42813	2.9e-08	32.67	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]

BLAST of Csor.00g086380.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599325.1	5.89e-126	100.00	Intracellular ribonuclease LX, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_023546907.1	3.42e-64	100.00	ribonuclease MC-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022946024.1	3.65e-64	100.00	ribonuclease MC-like isoform X1 [Cucurbita moschata]	[more]
XP_023546908.1	6.97e-53	100.00	ribonuclease MC-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022946025.1	7.41e-53	100.00	ribonuclease MC-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Csor.00g086380.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2M1	1.76e-64	100.00	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111450236 PE=3 SV=1	[more]
A0A6J1G2M7	3.59e-53	100.00	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111450236 PE=3 SV=1	[more]
A0A6J1F837	1.32e-25	54.08	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111441728 PE=3 SV=1	[more]
A0A6J1EXD5	2.19e-24	54.17	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1	[more]
A0A6J1IAR7	3.32e-24	45.90	Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111472844 PE=3 SV=1	[more]

BLAST of Csor.00g086380.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02990.1	2.1e-09	32.67	ribonuclease 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 49..172 e-value: 2.4E-20 score: 75.4
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 54..169
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 68..152 e-value: 1.1E-14 score: 55.0
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 69..163
None	No IPR available	PANTHER	PTHR11240:SF55	F7A19.32 PROTEIN	coord: 69..163

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g086380	Csor.00g086380	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g086380.m01.CDS02	Csor.00g086380.m01.CDS02	CDS
Csor.00g086380.m01.CDS01	Csor.00g086380.m01.CDS01	CDS

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g086380.m01.initial01	Csor.00g086380.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g086380.m01.start_codon01	Csor.00g086380.m01.start_codon01	start_codon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g086380.m01.intron01	Csor.00g086380.m01.intron01	intron

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g086380.m01.terminal01	Csor.00g086380.m01.terminal01	terminal

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g086380.m01.stop_codon01	Csor.00g086380.m01.stop_codon01	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g086380.m01	Csor.00g086380.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding