Csor.00g050610.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g050610.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Csor_Chr12: 3829295 .. 3830800 (-)
Sequence length	1506
RNA-Seq Expression	Csor.00g050610.m01
Synteny	Csor.00g050610.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCCTGTTCTCAACCACTACAATCTCTTCCATTCTGGTGAAACGAAATGGAGGAATTAGCTGCCAGATTCCGGTGGCTCATTTCCAGACCAACTCCAGAAGGCGACCACCAAAAAACCTCCTCTATCCACGGCGGACCAAGCTTCCCCCTGATCCCGGCGTCAATCAATTCTTGAAGAAACGAACCTCTGGCCCTCAGCCTGACACATCCTTCCCAGATTTGATTTCGAGCGAGAAAATCGGATTGCCGGAAGAAGAACTTGACGAGATTGAAGAAACCGCTGCGGATAACTATTTCGCCAATGATGATAACGACAGTGATGTTGTTTGGGATTCGGAAGAAATTGAAGCTATTACATCACTCTTCCGAGGGAGAATTCCTCAGAAACCTGGTAAATTGAACCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAGGACTTCCTAACCCTAAAGTTCGCCCAAGAACAGCGGTTTCTTCGCGTGCACTGATGTCTAAGCAAGTCTATAAACGCCCCGATTTTCTTATTGGACTTGCAAGAGCGATTAGAGATTTGAAACCGGAGGAGAATGTGTCCAAAGTTCTCAACAGGTGGGCACCATTTTTGCAGAAGGGGTCGCTGTCGTTAACGATCAAGGAACTAGGTCATATGGGTCTTGCTGATAGAGCTCTAAAGACGTTCTGTTGGGTACAAGAGCAACCTCGACTCTATCCAGATGATCGTGTTTTGGCCTCTACCGTTGAGGTCCTCGCAAGGAACCATGAACTTAAAATACCTTTCAACCTGGATGAGTTCACTAAACTTGCGAGTCGTGGTGTGCTCGAGGCAATGATGAGAGGGTTCATCAAAGGTGGGAGGTTAAGCCTTGCTTGGAAGCTTCTTGTAGCTGCCAAGAACGGTAAGAGAATGTTGGATCCTAGCGTTTATGTGAAGTTGATATTGGAGATTGGTAAGAACCCTGATAAAAACATGCTGGTACTTGCCTTACTAGATGAACTAGGACAAAGAGAAGCCTTGAATTTAAACCAGCAAGATACATCAGCTATCATTAAGGTCAGCACAAGGCTTGGTAAATTTGAAATTGCTGAAAGACTTTATAGCTGGTATGTTGAATCTGGGCATGAACCCAGTGTGGTTATGTACACTGCTTTAGTTCATAATCGATATTCAGAGAGGAAGTATAGGGAGGCATTATCTGTAGTGTGGGAAATGGAGGCTGCAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATGAAGCTTTTTGTTGCTCTTGGGGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTACCCCTACATATTGTATATATAGGAACTTGATTACCATTTATTTAGCTGCTGGCAGGTTAGCCAAGTGGAAGGAAATCTACAAGGAAGCAGAGAATGCTGGATATGTCATGGACAAACAAATTACCTCAATGTTGTTGCAAGCAAAAAGATGA

mRNA sequence

ATGGATTCCCTGTTCTCAACCACTACAATCTCTTCCATTCTGGTGAAACGAAATGGAGGAATTAGCTGCCAGATTCCGGTGGCTCATTTCCAGACCAACTCCAGAAGGCGACCACCAAAAAACCTCCTCTATCCACGGCGGACCAAGCTTCCCCCTGATCCCGGCGTCAATCAATTCTTGAAGAAACGAACCTCTGGCCCTCAGCCTGACACATCCTTCCCAGATTTGATTTCGAGCGAGAAAATCGGATTGCCGGAAGAAGAACTTGACGAGATTGAAGAAACCGCTGCGGATAACTATTTCGCCAATGATGATAACGACAGTGATGTTGTTTGGGATTCGGAAGAAATTGAAGCTATTACATCACTCTTCCGAGGGAGAATTCCTCAGAAACCTGGTAAATTGAACCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAGGACTTCCTAACCCTAAAGTTCGCCCAAGAACAGCGGTTTCTTCGCGTGCACTGATGTCTAAGCAAGTCTATAAACGCCCCGATTTTCTTATTGGACTTGCAAGAGCGATTAGAGATTTGAAACCGGAGGAGAATGTGTCCAAAGTTCTCAACAGGTGGGCACCATTTTTGCAGAAGGGGTCGCTGTCGTTAACGATCAAGGAACTAGGTCATATGGGTCTTGCTGATAGAGCTCTAAAGACGTTCTGTTGGGTACAAGAGCAACCTCGACTCTATCCAGATGATCGTGTTTTGGCCTCTACCGTTGAGGTCCTCGCAAGGAACCATGAACTTAAAATACCTTTCAACCTGGATGAGTTCACTAAACTTGCGAGTCGTGGTGTGCTCGAGGCAATGATGAGAGGGTTCATCAAAGGTGGGAGGTTAAGCCTTGCTTGGAAGCTTCTTGTAGCTGCCAAGAACGGTAAGAGAATGTTGGATCCTAGCGTTTATGTGAAGTTGATATTGGAGATTGGTAAGAACCCTGATAAAAACATGCTGGTACTTGCCTTACTAGATGAACTAGGACAAAGAGAAGCCTTGAATTTAAACCAGCAAGATACATCAGCTATCATTAAGGTCAGCACAAGGCTTGGTAAATTTGAAATTGCTGAAAGACTTTATAGCTGGTATGTTGAATCTGGGCATGAACCCAGTGTGGTTATGTACACTGCTTTAGTTCATAATCGATATTCAGAGAGGAAGTATAGGGAGGCATTATCTGTAGTGTGGGAAATGGAGGCTGCAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATGAAGCTTTTTGTTGCTCTTGGGGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTACCCCTACATATTGTATATATAGGAACTTGATTACCATTTATTTAGCTGCTGGCAGGTTAGCCAAGTGGAAGGAAATCTACAAGGAAGCAGAGAATGCTGGATATGTCATGGACAAACAAATTACCTCAATGTTGTTGCAAGCAAAAAGATGA

Coding sequence (CDS)

ATGGATTCCCTGTTCTCAACCACTACAATCTCTTCCATTCTGGTGAAACGAAATGGAGGAATTAGCTGCCAGATTCCGGTGGCTCATTTCCAGACCAACTCCAGAAGGCGACCACCAAAAAACCTCCTCTATCCACGGCGGACCAAGCTTCCCCCTGATCCCGGCGTCAATCAATTCTTGAAGAAACGAACCTCTGGCCCTCAGCCTGACACATCCTTCCCAGATTTGATTTCGAGCGAGAAAATCGGATTGCCGGAAGAAGAACTTGACGAGATTGAAGAAACCGCTGCGGATAACTATTTCGCCAATGATGATAACGACAGTGATGTTGTTTGGGATTCGGAAGAAATTGAAGCTATTACATCACTCTTCCGAGGGAGAATTCCTCAGAAACCTGGTAAATTGAACCGGGAGAGACCTCTTCCTCTCCCACTTCCTCACAAGCTACGACCACCAGGACTTCCTAACCCTAAAGTTCGCCCAAGAACAGCGGTTTCTTCGCGTGCACTGATGTCTAAGCAAGTCTATAAACGCCCCGATTTTCTTATTGGACTTGCAAGAGCGATTAGAGATTTGAAACCGGAGGAGAATGTGTCCAAAGTTCTCAACAGGTGGGCACCATTTTTGCAGAAGGGGTCGCTGTCGTTAACGATCAAGGAACTAGGTCATATGGGTCTTGCTGATAGAGCTCTAAAGACGTTCTGTTGGGTACAAGAGCAACCTCGACTCTATCCAGATGATCGTGTTTTGGCCTCTACCGTTGAGGTCCTCGCAAGGAACCATGAACTTAAAATACCTTTCAACCTGGATGAGTTCACTAAACTTGCGAGTCGTGGTGTGCTCGAGGCAATGATGAGAGGGTTCATCAAAGGTGGGAGGTTAAGCCTTGCTTGGAAGCTTCTTGTAGCTGCCAAGAACGGTAAGAGAATGTTGGATCCTAGCGTTTATGTGAAGTTGATATTGGAGATTGGTAAGAACCCTGATAAAAACATGCTGGTACTTGCCTTACTAGATGAACTAGGACAAAGAGAAGCCTTGAATTTAAACCAGCAAGATACATCAGCTATCATTAAGGTCAGCACAAGGCTTGGTAAATTTGAAATTGCTGAAAGACTTTATAGCTGGTATGTTGAATCTGGGCATGAACCCAGTGTGGTTATGTACACTGCTTTAGTTCATAATCGATATTCAGAGAGGAAGTATAGGGAGGCATTATCTGTAGTGTGGGAAATGGAGGCTGCAAACTGTCCTTTTGATCTTCCTGCTTATAGTGTAGTGATGAAGCTTTTTGTTGCTCTTGGGGATCTTTCAAGGGCTGTTAGATACTTTGCAAAGCTTAAGGAAGCTGGTTTTACCCCTACATATTGTATATATAGGAACTTGATTACCATTTATTTAGCTGCTGGCAGGTTAGCCAAGTGGAAGGAAATCTACAAGGAAGCAGAGAATGCTGGATATGTCATGGACAAACAAATTACCTCAATGTTGTTGCAAGCAAAAAGATGA

Protein sequence

MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPDFLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKEAENAGYVMDKQITSMLLQAKR

Homology

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BLAST of Csor.00g050610.m01 vs. ExPASy Swiss-Prot
Match: Q5XET4 (Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX=3702 GN=EMB975 PE=2 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 6.9e-135
Identity = 262/474 (55.27%), Postives = 347/474 (73.21%), Query Frame = 0


Query: 31  QTNSRRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSEKIGLPEEELD 90
           Q N  ++  KNL  PRRTKLPPD GVN FL+K    P                + +++ +
Sbjct: 34  QRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEPL---------------VIDDDDE 93

Query: 91  EIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLR 150
           +++E+       NDD+D+ VVW+ EEIEAI+SLF+ RIPQKP K +R RPLPLP PHKLR
Sbjct: 94  QVQES------VNDDDDA-VVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKLR 153

Query: 151 PPGLPNPKVRPRTAVSSRAL--MSKQVYKRPDFLIGLARAIRDL-KPEENVSKVLNRWAP 210
           P GLP PK   +  + S AL  +SKQVYK P FLIGLAR I+ L   + +VS VLN+W  
Sbjct: 154 PLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWVS 213

Query: 211 FLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPF 270
           FL+KGSLS TI+ELGHMGL +RAL+T+ W ++   L PD+R+LAST++VLA++HELK+  
Sbjct: 214 FLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL-- 273

Query: 271 NLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGKNP 330
            L     LAS+ V+EAM++G I+GG L+LA KL++ +K+  R+LD SVYVK+ILEI KNP
Sbjct: 274 -LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKNP 333

Query: 331 DKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVM 390
           DK  LV+ALL+EL +RE L L+QQD ++I+K+  +LG+FE+ E L+ W+  S  EPSVVM
Sbjct: 334 DKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVVM 393

Query: 391 YTALVHNRYSERKYREALSVVWEMEAANCPFDLPAYSVVMKLFVALGDLSRAVRYFAKLK 450
           YT ++H+RYSE+KYREA+SVVWEME +NC  DLPAY VV+KLFVAL DL RA+RY++KLK
Sbjct: 394 YTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKLK 453

Query: 451 EAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKEAENAGYVMDKQITSMLLQAKR 502
           EAGF+PTY IYR++I++Y A+GRL K KEI KE E+AG  +DK  +  LLQ ++
Sbjct: 454 EAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

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BLAST of Csor.00g050610.m01 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.5e-12
Identity = 67/322 (20.81%), Postives = 145/322 (45.03%), Query Frame = 0


Query: 185 LARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLY 244
           L   +  L P  ++++ L+ +   L     +L  KE    G   R+L+ F ++Q Q    
Sbjct: 79  LINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCK 138

Query: 245 PDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGV------LEAMMRGFIKGGRLSLAW 304
           P++ +    + +L R  E  +   L+ F ++ S+GV        A++  + + GR   + 
Sbjct: 139 PNEHIYTIMISLLGR--EGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 198

Query: 305 KLLVAAKNGKRMLDPSV--YVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAI 364
           +LL   KN K  + PS+  Y  +I    +       +L L  E+ + E +  +    + +
Sbjct: 199 ELLDRMKNEK--ISPSILTYNTVINACARGGLDWEGLLGLFAEM-RHEGIQPDIVTYNTL 258

Query: 365 IKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANC 424
           +      G  + AE ++    + G  P +  Y+ LV      R+  +   ++ EM +   
Sbjct: 259 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 318

Query: 425 PFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKE 484
             D+ +Y+V+++ +   G +  A+  F +++ AG TP    Y  L+ ++  +GR    ++
Sbjct: 319 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 378

Query: 485 IYKEAENAGYVMDKQITSMLLQ 499
           ++ E +++    D    ++L++
Sbjct: 379 LFLEMKSSNTDPDAATYNILIE 395

[Close]

BLAST of Csor.00g050610.m01 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.6e-11
Identity = 76/310 (24.52%), Postives = 128/310 (41.29%), Query Frame = 0


Query: 193 KPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWV---QEQPRLYPDDRV 252
           +P   +S+  +     L +  L   +K L   G  +RA+  F W+        L  D +V
Sbjct: 118 QPLTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQV 177

Query: 253 LASTVEVLARNHEL--------KIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLL 312
           +   V +L R  +         KIP  L E+  L        ++  + + G+   A  L 
Sbjct: 178 IEIFVRILGRESQYSVAAKLLDKIP--LQEY--LLDVRAYTTILHAYSRTGKYEKAIDLF 237

Query: 313 VAAKNGKRMLDPS---VYVKLILEI-GKNPDKNMLVLALLDELGQREALNLNQQDTSAII 372
              K     + PS   V   +IL++ GK       +L +LDE+ + + L  ++   S ++
Sbjct: 238 ERMKE----MGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM-RSKGLKFDEFTCSTVL 297

Query: 373 KVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCP 432
               R G    A+  ++     G+EP  V Y AL+        Y EALSV+ EME  +CP
Sbjct: 298 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 357

Query: 433 FDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEI 488
            D   Y+ ++  +V  G    A      + + G  P    Y  +I  Y  AG+  +  ++
Sbjct: 358 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 417

[Close]

BLAST of Csor.00g050610.m01 vs. ExPASy Swiss-Prot
Match: Q66GP4 (Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g13770 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-10
Identity = 60/237 (25.32%), Postives = 111/237 (46.84%), Query Frame = 0


Query: 269 LDEFTKLASRGVLEA------MMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILE 328
           L+   ++  +G+ E+      ++R F +   + +  KL   A   K + DP + +K++L 
Sbjct: 268 LEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM 327

Query: 329 IGK--NPDKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESG 388
             +  N +  + V+A +    ++  L +      AI+   ++   F  A ++Y W ++  
Sbjct: 328 YVREGNMETTLEVVAAM----RKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 387

Query: 389 HEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDLPAYSVVMKLFVALGDLSRAV 448
            E   V Y   ++      KY +A  +  EM        + AYS +M ++     LS AV
Sbjct: 388 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 447

Query: 449 RYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKEAENAGYVMDK-QITSML 497
           R  AK+K+ G  P   IY +LI ++  A  L + ++I+KE + A  + DK   TSM+
Sbjct: 448 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMI 500

[Close]

BLAST of Csor.00g050610.m01 vs. ExPASy Swiss-Prot
Match: Q9SS81 (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN=At3g09060 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-09
Identity = 64/256 (25.00%), Postives = 120/256 (46.88%), Query Frame = 0


Query: 251 ASTVEVLARNHELKIPFNL-DEFTKLA---SRGVLEAMMRGFIKGGRLSLA-WKLLVAAK 310
           AS ++ L +   L+   NL  E +K     +  V  A++ G I+  RL  A + L    K
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492

Query: 311 NGKR--MLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRL 370
           NG R  ++  ++ +  + + GK  + +  V  +L E G +  L    +  S ++    R 
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEML-ENGWKPDL----KTYSILLCGLCRD 552

Query: 371 GKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDLPAY 430
            K ++A  L+  +++SG E  V+M+  L+H   S  K  +A++V+  ME  NC  +L  Y
Sbjct: 553 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 612

Query: 431 SVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKEAEN 490
           + +M+ F  +GD +RA   +  + + G  P    Y  ++        ++   E + +A N
Sbjct: 613 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN 672

Query: 491 AGYVMDKQITSMLLQA 500
            G        ++L++A
Sbjct: 673 HGIFPTVYTWNILVRA 683

[Close]

BLAST of Csor.00g050610.m01 vs. NCBI nr
Match: KAG6585791.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 985 bits (2547), Expect = 0.0
Identity = 501/501 (100.00%), Postives = 501/501 (100.00%), Query Frame = 0


Query: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
           MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
           KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI
Sbjct: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120

Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180
           TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
           FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
           PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
           LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
           TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420

Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480
           PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480

Query: 481 AENAGYVMDKQITSMLLQAKR 501
           AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of Csor.00g050610.m01 vs. NCBI nr
Match: KAG7020726.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 979 bits (2530), Expect = 0.0
Identity = 498/501 (99.40%), Postives = 500/501 (99.80%), Query Frame = 0


Query: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
           MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
           KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI
Sbjct: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120

Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180
           TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPK+RPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
           FLIGLARAIRDLKPEEN+SKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLKPEENMSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
           PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
           LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
           TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420

Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480
           PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAK KEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGYVMDKQITSMLLQAKR 501
           AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of Csor.00g050610.m01 vs. NCBI nr
Match: XP_022951807.1 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Cucurbita moschata])

HSP 1 Score: 976 bits (2523), Expect = 0.0
Identity = 498/501 (99.40%), Postives = 499/501 (99.60%), Query Frame = 0


Query: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
           MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
           KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI
Sbjct: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120

Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180
           TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPK+RPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
           FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
           PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
           LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
           TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAN PFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420

Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480
           PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAK KEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGYVMDKQITSMLLQAKR 501
           AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of Csor.00g050610.m01 vs. NCBI nr
Match: XP_023537574.1 (pentatricopeptide repeat-containing protein At2g01860 [Cucurbita pepo subsp. pepo] >XP_023537576.1 pentatricopeptide repeat-containing protein At2g01860 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 963 bits (2489), Expect = 0.0
Identity = 488/501 (97.41%), Postives = 495/501 (98.80%), Query Frame = 0


Query: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
           MDSLFSTTTISSILVKRNGG+SCQIP+AHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1   MDSLFSTTTISSILVKRNGGVSCQIPMAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
           KKRTSGP PDTS PDLI SEKIG PEEELDE+EETAADNYFANDDNDSD+VWDSEEIEAI
Sbjct: 61  KKRTSGPHPDTSLPDLIPSEKIGPPEEELDELEETAADNYFANDDNDSDIVWDSEEIEAI 120

Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180
           TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPK+RPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
           FLIGLARAIRDL+PEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
           PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
           LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
           TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAA CPFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAKCPFDL 420

Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480
           PAYSVV+KLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAK KEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGYVMDKQITSMLLQAKR 501
           AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of Csor.00g050610.m01 vs. NCBI nr
Match: XP_023001961.1 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Cucurbita maxima])

HSP 1 Score: 954 bits (2465), Expect = 0.0
Identity = 482/501 (96.21%), Postives = 494/501 (98.60%), Query Frame = 0


Query: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
           MDSLFSTT +SSILVKRNGGISCQIP+AHF TNS+RRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1   MDSLFSTTAVSSILVKRNGGISCQIPMAHFLTNSKRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
           KKRTS P PDTS+PDLI SEKIGLPEEELDE+EETAADNYFANDDNDSD+VWD EEIEAI
Sbjct: 61  KKRTSDPHPDTSYPDLIPSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAI 120

Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180
           TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPK+RPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
           FLIGLARAIRDL+PEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
           PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
           LVAAKNGKRMLDPSV+VKLILEIGKNPDKNMLVLALLDELGQREALNL+QQDTSAIIKVS
Sbjct: 301 LVAAKNGKRMLDPSVHVKLILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVS 360

Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
           TRLGKFEIAE+LYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL
Sbjct: 361 TRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420

Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480
           PAYSVV+KLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAK KEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGYVMDKQITSMLLQAKR 501
           AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of Csor.00g050610.m01 vs. ExPASy TrEMBL
Match: A0A6J1GIP2 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454537 PE=4 SV=1)

HSP 1 Score: 976 bits (2523), Expect = 0.0
Identity = 498/501 (99.40%), Postives = 499/501 (99.60%), Query Frame = 0


Query: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
           MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
           KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI
Sbjct: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120

Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180
           TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPK+RPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
           FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
           PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
           LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS
Sbjct: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
           TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAN PFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420

Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480
           PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAK KEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGYVMDKQITSMLLQAKR 501
           AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of Csor.00g050610.m01 vs. ExPASy TrEMBL
Match: A0A6J1KK31 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495984 PE=4 SV=1)

HSP 1 Score: 954 bits (2465), Expect = 0.0
Identity = 482/501 (96.21%), Postives = 494/501 (98.60%), Query Frame = 0


Query: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
           MDSLFSTT +SSILVKRNGGISCQIP+AHF TNS+RRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1   MDSLFSTTAVSSILVKRNGGISCQIPMAHFLTNSKRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
           KKRTS P PDTS+PDLI SEKIGLPEEELDE+EETAADNYFANDDNDSD+VWD EEIEAI
Sbjct: 61  KKRTSDPHPDTSYPDLIPSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAI 120

Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180
           TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPK+RPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
           FLIGLARAIRDL+PEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
           PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
           LVAAKNGKRMLDPSV+VKLILEIGKNPDKNMLVLALLDELGQREALNL+QQDTSAIIKVS
Sbjct: 301 LVAAKNGKRMLDPSVHVKLILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVS 360

Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
           TRLGKFEIAE+LYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL
Sbjct: 361 TRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420

Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480
           PAYSVV+KLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAK KEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480

Query: 481 AENAGYVMDKQITSMLLQAKR 501
           AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 501

[Close]

BLAST of Csor.00g050610.m01 vs. ExPASy TrEMBL
Match: A0A6J1GIR9 (pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454537 PE=4 SV=1)

HSP 1 Score: 902 bits (2332), Expect = 0.0
Identity = 467/501 (93.21%), Postives = 468/501 (93.41%), Query Frame = 0


Query: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
           MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
           KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI
Sbjct: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120

Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180
           TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPK+RPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
           FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
           PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
           LVAAKN                               DELGQREALNLNQQDTSAIIKVS
Sbjct: 301 LVAAKN-------------------------------DELGQREALNLNQQDTSAIIKVS 360

Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
           TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAN PFDL
Sbjct: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420

Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480
           PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAK KEIYKE
Sbjct: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 470

Query: 481 AENAGYVMDKQITSMLLQAKR 501
           AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 470

[Close]

BLAST of Csor.00g050610.m01 vs. ExPASy TrEMBL
Match: A0A6J1KI41 (pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495984 PE=4 SV=1)

HSP 1 Score: 882 bits (2279), Expect = 0.0
Identity = 452/501 (90.22%), Postives = 463/501 (92.42%), Query Frame = 0


Query: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
           MDSLFSTT +SSILVKRNGGISCQIP+AHF TNS+RRPPKNLLYPRRTKLPPDPGVNQFL
Sbjct: 1   MDSLFSTTAVSSILVKRNGGISCQIPMAHFLTNSKRRPPKNLLYPRRTKLPPDPGVNQFL 60

Query: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
           KKRTS P PDTS+PDLI SEKIGLPEEELDE+EETAADNYFANDDNDSD+VWD EEIEAI
Sbjct: 61  KKRTSDPHPDTSYPDLIPSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAI 120

Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180
           TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPK+RPRTAVSSRALMSKQVYKRPD
Sbjct: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180

Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
           FLIGLARAIRDL+PEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240

Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
           PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL
Sbjct: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300

Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
           LVAAKN                               DELGQREALNL+QQDTSAIIKVS
Sbjct: 301 LVAAKN-------------------------------DELGQREALNLSQQDTSAIIKVS 360

Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
           TRLGKFEIAE+LYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL
Sbjct: 361 TRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420

Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480
           PAYSVV+KLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAK KEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 470

Query: 481 AENAGYVMDKQITSMLLQAKR 501
           AENAGYVMDKQITSMLLQAKR
Sbjct: 481 AENAGYVMDKQITSMLLQAKR 470

[Close]

BLAST of Csor.00g050610.m01 vs. ExPASy TrEMBL
Match: A0A6J1DI37 (pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020698 PE=4 SV=1)

HSP 1 Score: 799 bits (2064), Expect = 1.11e-288
Identity = 405/498 (81.33%), Postives = 445/498 (89.36%), Query Frame = 0


Query: 1   MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
           MD +FS++ +SSI+VK NGGISCQI +A F  N+RRR PKNLL PRRTKLPPDPGVNQFL
Sbjct: 1   MDCIFSSSIVSSIMVKGNGGISCQISMARFMANARRRLPKNLLNPRRTKLPPDPGVNQFL 60

Query: 61  KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
           K  TSG  P  SF D  SSEKI  PEEE D+ EE   +NYF  DD D +++WDS+EIEAI
Sbjct: 61  KNTTSGSGP--SFTDFTSSEKIEFPEEEHDDHEEADTENYFV-DDKDGEIIWDSDEIEAI 120

Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKVRPRTAVSSRALMSKQVYKRPD 180
           +SLF+GRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPK+R RT V SRA +SKQVYKRPD
Sbjct: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRARTGVPSRASLSKQVYKRPD 180

Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
           FLIGLARAIRDL  EENVSKVLNRWAPFL KGSLSLTI+ELGHMGLADRAL++FCW QEQ
Sbjct: 181 FLIGLARAIRDLSREENVSKVLNRWAPFLLKGSLSLTIRELGHMGLADRALQSFCWAQEQ 240

Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
           PRL+PDDRVLASTVEVL+RNHELK+P NL+EFT+LASRGVLEAM+RGFIKGG L+LAWKL
Sbjct: 241 PRLFPDDRVLASTVEVLSRNHELKVPLNLEEFTRLASRGVLEAMIRGFIKGGSLNLAWKL 300

Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
           LV AK G RMLDPSVYVKLILE+GKNPDKNMLVL LLDELGQREAL LNQQDT+AI+KV 
Sbjct: 301 LVVAKKGNRMLDPSVYVKLILELGKNPDKNMLVLTLLDELGQREALKLNQQDTTAIMKVC 360

Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
           TRLGKFEIAERLY WYVES HEPSVVMYTAL+H+RYSE+KYREALSVVWEMEAANCPFDL
Sbjct: 361 TRLGKFEIAERLYGWYVESVHEPSVVMYTALIHSRYSEKKYREALSVVWEMEAANCPFDL 420

Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKE 480
           PAY+VV+KLFVALGDLSRA RYFAKLKEAGF PTY IYRNLITIYL +GRLAK KEIYKE
Sbjct: 421 PAYNVVIKLFVALGDLSRAARYFAKLKEAGFAPTYDIYRNLITIYLVSGRLAKCKEIYKE 480

Query: 481 AENAGYVMDKQITSMLLQ 498
           A+NAG+++DKQITS LLQ
Sbjct: 481 AKNAGFIIDKQITSRLLQ 495

[Close]

BLAST of Csor.00g050610.m01 vs. TAIR 10
Match: AT2G01860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 482.3 bits (1240), Expect = 4.9e-136
Identity = 262/474 (55.27%), Postives = 347/474 (73.21%), Query Frame = 0


Query: 31  QTNSRRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSEKIGLPEEELD 90
           Q N  ++  KNL  PRRTKLPPD GVN FL+K    P                + +++ +
Sbjct: 34  QRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEPL---------------VIDDDDE 93

Query: 91  EIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLR 150
           +++E+       NDD+D+ VVW+ EEIEAI+SLF+ RIPQKP K +R RPLPLP PHKLR
Sbjct: 94  QVQES------VNDDDDA-VVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKLR 153

Query: 151 PPGLPNPKVRPRTAVSSRAL--MSKQVYKRPDFLIGLARAIRDL-KPEENVSKVLNRWAP 210
           P GLP PK   +  + S AL  +SKQVYK P FLIGLAR I+ L   + +VS VLN+W  
Sbjct: 154 PLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWVS 213

Query: 211 FLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPF 270
           FL+KGSLS TI+ELGHMGL +RAL+T+ W ++   L PD+R+LAST++VLA++HELK+  
Sbjct: 214 FLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL-- 273

Query: 271 NLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGKNP 330
            L     LAS+ V+EAM++G I+GG L+LA KL++ +K+  R+LD SVYVK+ILEI KNP
Sbjct: 274 -LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKNP 333

Query: 331 DKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVM 390
           DK  LV+ALL+EL +RE L L+QQD ++I+K+  +LG+FE+ E L+ W+  S  EPSVVM
Sbjct: 334 DKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVVM 393

Query: 391 YTALVHNRYSERKYREALSVVWEMEAANCPFDLPAYSVVMKLFVALGDLSRAVRYFAKLK 450
           YT ++H+RYSE+KYREA+SVVWEME +NC  DLPAY VV+KLFVAL DL RA+RY++KLK
Sbjct: 394 YTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKLK 453

Query: 451 EAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKEAENAGYVMDKQITSMLLQAKR 502
           EAGF+PTY IYR++I++Y A+GRL K KEI KE E+AG  +DK  +  LLQ ++
Sbjct: 454 EAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479

[Close]

BLAST of Csor.00g050610.m01 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-13
Identity = 67/322 (20.81%), Postives = 145/322 (45.03%), Query Frame = 0


Query: 185 LARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLY 244
           L   +  L P  ++++ L+ +   L     +L  KE    G   R+L+ F ++Q Q    
Sbjct: 79  LINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCK 138

Query: 245 PDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGV------LEAMMRGFIKGGRLSLAW 304
           P++ +    + +L R  E  +   L+ F ++ S+GV        A++  + + GR   + 
Sbjct: 139 PNEHIYTIMISLLGR--EGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 198

Query: 305 KLLVAAKNGKRMLDPSV--YVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAI 364
           +LL   KN K  + PS+  Y  +I    +       +L L  E+ + E +  +    + +
Sbjct: 199 ELLDRMKNEK--ISPSILTYNTVINACARGGLDWEGLLGLFAEM-RHEGIQPDIVTYNTL 258

Query: 365 IKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANC 424
           +      G  + AE ++    + G  P +  Y+ LV      R+  +   ++ EM +   
Sbjct: 259 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 318

Query: 425 PFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKE 484
             D+ +Y+V+++ +   G +  A+  F +++ AG TP    Y  L+ ++  +GR    ++
Sbjct: 319 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 378

Query: 485 IYKEAENAGYVMDKQITSMLLQ 499
           ++ E +++    D    ++L++
Sbjct: 379 LFLEMKSSNTDPDAATYNILIE 395

[Close]

BLAST of Csor.00g050610.m01 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-12
Identity = 76/310 (24.52%), Postives = 128/310 (41.29%), Query Frame = 0


Query: 193 KPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWV---QEQPRLYPDDRV 252
           +P   +S+  +     L +  L   +K L   G  +RA+  F W+        L  D +V
Sbjct: 118 QPLTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQV 177

Query: 253 LASTVEVLARNHEL--------KIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLL 312
           +   V +L R  +         KIP  L E+  L        ++  + + G+   A  L 
Sbjct: 178 IEIFVRILGRESQYSVAAKLLDKIP--LQEY--LLDVRAYTTILHAYSRTGKYEKAIDLF 237

Query: 313 VAAKNGKRMLDPS---VYVKLILEI-GKNPDKNMLVLALLDELGQREALNLNQQDTSAII 372
              K     + PS   V   +IL++ GK       +L +LDE+ + + L  ++   S ++
Sbjct: 238 ERMKE----MGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM-RSKGLKFDEFTCSTVL 297

Query: 373 KVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCP 432
               R G    A+  ++     G+EP  V Y AL+        Y EALSV+ EME  +CP
Sbjct: 298 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 357

Query: 433 FDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEI 488
            D   Y+ ++  +V  G    A      + + G  P    Y  +I  Y  AG+  +  ++
Sbjct: 358 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 417

[Close]

BLAST of Csor.00g050610.m01 vs. TAIR 10
Match: AT5G13770.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-11
Identity = 60/237 (25.32%), Postives = 111/237 (46.84%), Query Frame = 0


Query: 269 LDEFTKLASRGVLEA------MMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILE 328
           L+   ++  +G+ E+      ++R F +   + +  KL   A   K + DP + +K++L 
Sbjct: 268 LEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM 327

Query: 329 IGK--NPDKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESG 388
             +  N +  + V+A +    ++  L +      AI+   ++   F  A ++Y W ++  
Sbjct: 328 YVREGNMETTLEVVAAM----RKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 387

Query: 389 HEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDLPAYSVVMKLFVALGDLSRAV 448
            E   V Y   ++      KY +A  +  EM        + AYS +M ++     LS AV
Sbjct: 388 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 447

Query: 449 RYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKEAENAGYVMDK-QITSML 497
           R  AK+K+ G  P   IY +LI ++  A  L + ++I+KE + A  + DK   TSM+
Sbjct: 448 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMI 500

[Close]

BLAST of Csor.00g050610.m01 vs. TAIR 10
Match: AT3G09060.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-10
Identity = 64/256 (25.00%), Postives = 120/256 (46.88%), Query Frame = 0


Query: 251 ASTVEVLARNHELKIPFNL-DEFTKLA---SRGVLEAMMRGFIKGGRLSLA-WKLLVAAK 310
           AS ++ L +   L+   NL  E +K     +  V  A++ G I+  RL  A + L    K
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492

Query: 311 NGKR--MLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRL 370
           NG R  ++  ++ +  + + GK  + +  V  +L E G +  L    +  S ++    R 
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEML-ENGWKPDL----KTYSILLCGLCRD 552

Query: 371 GKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDLPAY 430
            K ++A  L+  +++SG E  V+M+  L+H   S  K  +A++V+  ME  NC  +L  Y
Sbjct: 553 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 612

Query: 431 SVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKWKEIYKEAEN 490
           + +M+ F  +GD +RA   +  + + G  P    Y  ++        ++   E + +A N
Sbjct: 613 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN 672

Query: 491 AGYVMDKQITSMLLQA 500
            G        ++L++A
Sbjct: 673 HGIFPTVYTWNILVRA 683

The following BLAST results are available for this feature:

BLAST of Csor.00g050610.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XET4	6.9e-135	55.27	Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana OX...	[more]
Q9S7Q2	1.5e-12	20.81	Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop...	[more]
O64624	1.6e-11	24.52	Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop...	[more]
Q66GP4	3.1e-10	25.32	Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidop...	[more]
Q9SS81	2.0e-09	25.00	Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX...	[more]

BLAST of Csor.00g050610.m01 vs. NCBI nr


Match Name	Identity	Description
KAG6585791.1	100.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG7020726.1	99.40	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022951807.1	99.40	pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Cucurbita mosc...	[more]
XP_023537574.1	97.41	pentatricopeptide repeat-containing protein At2g01860 [Cucurbita pepo subsp. pep...	[more]
XP_023001961.1	96.21	pentatricopeptide repeat-containing protein At2g01860 isoform X1 [Cucurbita maxi...	[more]

BLAST of Csor.00g050610.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GIP2	0.0	99.40	pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1KK31	0.0	96.21	pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1GIR9	0.0	93.21	pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Cucurbita mo...	[more]
A0A6J1KI41	0.0	90.22	pentatricopeptide repeat-containing protein At2g01860 isoform X2 OS=Cucurbita ma...	[more]
A0A6J1DI37	1.11e-288	81.33	pentatricopeptide repeat-containing protein At2g01860 isoform X1 OS=Momordica ch...	[more]

BLAST of Csor.00g050610.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01860.1	4.9e-136	55.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G74850.1	1.1e-13	20.81	plastid transcriptionally active 2	[more]
AT2G18940.1	1.2e-12	24.52	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G13770.1	2.2e-11	25.32	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT3G09060.1	1.4e-10	25.00	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 182..310 e-value: 1.4E-6 score: 29.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 328..501 e-value: 6.7E-24 score: 86.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 407..465 e-value: 3.9E-5 score: 23.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 419..453 score: 9.832344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..76
None	No IPR available	PANTHER	PTHR46128	MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1	coord: 86..476
None	No IPR available	PANTHER	PTHR46128:SF179	TETRATRICOPEPTIDE REPEAT-LIKE SUPERFAMILY PROTEIN	coord: 86..476

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g050610	Csor.00g050610	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g050610.m01.CDS01	Csor.00g050610.m01.CDS01	CDS

The following single feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g050610.m01.single01	Csor.00g050610.m01.single01	single

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g050610.m01.stop_codon01	Csor.00g050610.m01.stop_codon01	stop_codon

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g050610.m01.start_codon01	Csor.00g050610.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g050610.m01	Csor.00g050610.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding