Csor.00g034650.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g034650.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	NDR1/HIN1-like protein 13
Location	Csor_Chr14: 12137584 .. 12138357 (-)
Sequence length	774
RNA-Seq Expression	Csor.00g034650.m01
Synteny	Csor.00g034650.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGACAGAGTCCACCCTAACGCCGCCGCCGCTGCCGCTGTCACCAACGGCGCTCCGGCGGCCAAGACCGCTCCATTTCCAGCCACCAAGTCCCAACTCTACGGCGCTAGCCGCCCTGCTTACCGTCCTCAGCCATACCACCGCCGACGCCGCAGCCGCAGTTGCTGCTGCTCTGTCTGCCTCTGGTTATCCCTAATTCTCATCCTCCTAATCTTCCTCCTTGCCGTTGCCTCGGCCGTCGTTTACCTAATCTACCGCCCTCAGAGGCCGTCCTTCTCCGTCTCCGCCGTGAAACTCTCCCATTTCAACATCACTTCCTCTTCACTCCTCAATTCGAAGTTCGATCTCAACGTCTCCGCCAGAAACCCTAACAAAAAACTCGTGTTCACTTACAATCCGGTCTCGATTTCAATCTTCTCCAACGAAATCGATGTCGGCGACGGAGTAATTCCTGGATTTGTGCACAATACGAAGAACACCACTCTGTTGAAGACCTCGATTATCAGCAACCGCCAACAACTCGATAGCTCGTCGGTGAGCACCTTGAAGAGTAGTATGAAGAGCAAGAAAGGCTTGCCGTTACAAATTCAACTCGATACAAAGGTGATATTAAAGATGGGAGCACTTAAGAGCCCTAAAATCGGAATCAGAGTTTCTTGCGACGGAATCTCGGTAACCGTTCCCACCGGTAAATCTCCGGCCACCGCCTCAACTTCCGGCGCAAAATGTAAGGTCGATCTTAGAGTGAAGATCTGGAAATGGACCATCTAA

mRNA sequence

ATGACGGACAGAGTCCACCCTAACGCCGCCGCCGCTGCCGCTGTCACCAACGGCGCTCCGGCGGCCAAGACCGCTCCATTTCCAGCCACCAAGTCCCAACTCTACGGCGCTAGCCGCCCTGCTTACCGTCCTCAGCCATACCACCGCCGACGCCGCAGCCGCAGTTGCTGCTGCTCTGTCTGCCTCTGGTTATCCCTAATTCTCATCCTCCTAATCTTCCTCCTTGCCGTTGCCTCGGCCGTCGTTTACCTAATCTACCGCCCTCAGAGGCCGTCCTTCTCCGTCTCCGCCGTGAAACTCTCCCATTTCAACATCACTTCCTCTTCACTCCTCAATTCGAAGTTCGATCTCAACGTCTCCGCCAGAAACCCTAACAAAAAACTCGTGTTCACTTACAATCCGGTCTCGATTTCAATCTTCTCCAACGAAATCGATGTCGGCGACGGAGTAATTCCTGGATTTGTGCACAATACGAAGAACACCACTCTGTTGAAGACCTCGATTATCAGCAACCGCCAACAACTCGATAGCTCGTCGGTGAGCACCTTGAAGAGTAGTATGAAGAGCAAGAAAGGCTTGCCGTTACAAATTCAACTCGATACAAAGGTGATATTAAAGATGGGAGCACTTAAGAGCCCTAAAATCGGAATCAGAGTTTCTTGCGACGGAATCTCGGTAACCGTTCCCACCGGTAAATCTCCGGCCACCGCCTCAACTTCCGGCGCAAAATGTAAGGTCGATCTTAGAGTGAAGATCTGGAAATGGACCATCTAA

Coding sequence (CDS)

ATGACGGACAGAGTCCACCCTAACGCCGCCGCCGCTGCCGCTGTCACCAACGGCGCTCCGGCGGCCAAGACCGCTCCATTTCCAGCCACCAAGTCCCAACTCTACGGCGCTAGCCGCCCTGCTTACCGTCCTCAGCCATACCACCGCCGACGCCGCAGCCGCAGTTGCTGCTGCTCTGTCTGCCTCTGGTTATCCCTAATTCTCATCCTCCTAATCTTCCTCCTTGCCGTTGCCTCGGCCGTCGTTTACCTAATCTACCGCCCTCAGAGGCCGTCCTTCTCCGTCTCCGCCGTGAAACTCTCCCATTTCAACATCACTTCCTCTTCACTCCTCAATTCGAAGTTCGATCTCAACGTCTCCGCCAGAAACCCTAACAAAAAACTCGTGTTCACTTACAATCCGGTCTCGATTTCAATCTTCTCCAACGAAATCGATGTCGGCGACGGAGTAATTCCTGGATTTGTGCACAATACGAAGAACACCACTCTGTTGAAGACCTCGATTATCAGCAACCGCCAACAACTCGATAGCTCGTCGGTGAGCACCTTGAAGAGTAGTATGAAGAGCAAGAAAGGCTTGCCGTTACAAATTCAACTCGATACAAAGGTGATATTAAAGATGGGAGCACTTAAGAGCCCTAAAATCGGAATCAGAGTTTCTTGCGACGGAATCTCGGTAACCGTTCCCACCGGTAAATCTCCGGCCACCGCCTCAACTTCCGGCGCAAAATGTAAGGTCGATCTTAGAGTGAAGATCTGGAAATGGACCATCTAA

Protein sequence

MTDRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVSARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSVSTLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTSGAKCKVDLRVKIWKWTI

Homology

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BLAST of Csor.00g034650.m01 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 80/269 (29.74%), Postives = 144/269 (53.53%), Query Frame = 0


Query: 1   MTDRVHP------NAAAAAAVTNGAPAAKTAPFPAT------KSQLYGASRP--AYRPQP 60
           M +RV+P      +   +   ++G    K AP P+T      K Q+Y    P  A+R + 
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  YHRRRRSRS-CCCSVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNI 120
             R++ +RS C C  C +L+ + IL++ L  ++ AV+YLIYRP+ P +S+    +S  N+
Sbjct: 61  LSRKKTNRSNCRCCFCSFLAAVFILIV-LAGISFAVLYLIYRPEAPKYSIEGFSVSGINL 120

Query: 121 TSSSLLNSKFDLNVSARNPNKKL-VFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLL 180
            S+S ++  F++ V +RN N K+ V+     S+ ++ N++D+ +GV+P F    KN T++
Sbjct: 121 NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVV 180

Query: 181 KTSIISNRQQLDSSSVSTLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGI 240
           K  +  ++ QL S     +++ + SKK +P ++++   V +K G++K+  + + V CD  
Sbjct: 181 KLVLSGSKIQLTSGMRKEMRNEV-SKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCD-- 240

Query: 241 SVTVPTGKSPATASTSGAKCKVDLRVKIW 254
              V   K  A +     KC  D  V +W
Sbjct: 241 ---VTVDKLTAPSRIVSRKCSHD--VDLW 260

[Close]

BLAST of Csor.00g034650.m01 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.9e-13
Identity = 67/250 (26.80%), Postives = 124/250 (49.60%), Query Frame = 0


Query: 7   PNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPA--YRPQ---PYHRRRRSRSCCCSVC 66
           P AA A       P A   P  +++S+    S+     RPQ   P    ++ RSCCC   
Sbjct: 13  PEAATA------RPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCCRCF 72

Query: 67  LWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVSA 126
            +    L+LL+  +  +  ++YL+++P+ P +S+  ++L+ F +   S L + F++ ++A
Sbjct: 73  CYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVTITA 132

Query: 127 RNPNKKLVFTYNPVS-ISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 186
           +NPN+K+   Y   S I+++  E  + +G +P F    +NTT++   +    Q   S   
Sbjct: 133 KNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNA-SGLR 192

Query: 187 STLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 246
           +TL+   +    +PL+I+++  V +K G LK  ++   V C     ++ T       S+S
Sbjct: 193 TTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVIKIQSSS 252

Query: 247 GAKCKVDLRV 251
              CK  LR+
Sbjct: 253 ---CKFRLRL 252

[Close]

BLAST of Csor.00g034650.m01 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.4e-12
Identity = 62/216 (28.70%), Postives = 103/216 (47.69%), Query Frame = 0


Query: 35  YGASRPAYRPQPYHRRRRSRSC-CCSVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSF 94
           YG S P   P+ Y+RR   R C CC + L++  ++I LI +L VA+ + +LI RP+   F
Sbjct: 12  YGPSVPPPAPKGYYRRGHGRGCGCCLLSLFVK-VIISLIVILGVAALIFWLIVRPRAIKF 71

Query: 95  SVSAVKLSHFNITS-SSLLNSKFDLNVSARNPNKKLVFTYNPVSISIFSNEIDVGDGVIP 154
            V+   L+ F+ TS  ++L     L V  RNPNK++   Y+ +    +          + 
Sbjct: 72  HVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLT 131

Query: 155 GFVHNTKNTTLLKTSIISNRQQLDSSSVSTLKSSMKSKKGLPLQIQLDTKVILKMGALKS 214
            F    KNTT+L  +       + ++  S   ++ +      ++I+   +V  K+G LK 
Sbjct: 132 PFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKF 191

Query: 215 PKIGIRVSCDGISVTVPTGKSPATAST-SGAKCKVD 248
            +I  +V CD + + + T     T ST    KC  D
Sbjct: 192 RRIKPKVDCDDLRLPLSTSNGTTTTSTVFPIKCDFD 226

[Close]

BLAST of Csor.00g034650.m01 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.7e-10
Identity = 69/238 (28.99%), Postives = 107/238 (44.96%), Query Frame = 0


Query: 28  PATKSQLYGASRPAYRPQPYHRRRRSR--SCCCSVCLW----------LSL---ILILLI 87
           P      YG S P   P   HR   S    CCC  CL           LSL   ILI + 
Sbjct: 6   PYLNGAYYGPSIPP--PPKAHRSYNSPGFGCCCFSCLGSCLRCCGCCILSLICNILIAVA 65

Query: 88  FLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVSARNPNKKLVFTY 147
            +L VA+ +++LI+RP    F V+   L+ F+   ++ L+   DLN + RNPN+++   Y
Sbjct: 66  VILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVGVYY 125

Query: 148 NPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSII-SNRQQLDSSSVSTLKSSMKSKK 207
           +  S+S +  +   G   +  F    KNTT++ T I   N   L   + + LK   KS  
Sbjct: 126 DEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKS-- 185

Query: 208 GL-PLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTSGAKCKVDL 249
           G+  +  +L   V  K   +KS K+  ++ CD + + + +  S         +C  DL
Sbjct: 186 GIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQCDFDL 239

[Close]

BLAST of Csor.00g034650.m01 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-09
Identity = 62/226 (27.43%), Postives = 103/226 (45.58%), Query Frame = 0


Query: 35  YGASRPAYRPQPYHRRRRSRSC--------CCSVCLWLSL--ILILLIFLLAVASAVVYL 94
           YG S P  +   +   RR   C        CC  C+   +  ILI +  LL +A+ +++L
Sbjct: 9   YGPSIPPPKKVSHSHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAALIIWL 68

Query: 95  IYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVSARNPNKKLVFTYNPVSISIFSNEI 154
           I+RP    F V+  KL+ F +  ++ L    DLN + RNPN+++   Y+ + +  +  + 
Sbjct: 69  IFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQ 128

Query: 155 DVG-DGVIPGFVHNTKNTTLLKTSIISNR-QQLDSSSVSTLKSSMKSKKGLPLQIQLDTK 214
             G    I  F    KNTT++ T ++  +   LD      L   + S+    +  +L  K
Sbjct: 129 RFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQI-YRIDAKLRLK 188

Query: 215 VILKMGALKSPKIGIRVSCDGISVTVP-TGKSPATASTSGAKCKVD 248
           +  K G +KS +   ++ CD   + VP T  S +       KC VD
Sbjct: 189 IRFKFGLIKSWRFKPKIKCD---LKVPLTSNSTSGFVFQPTKCDVD 230

[Close]

BLAST of Csor.00g034650.m01 vs. NCBI nr
Match: KAG6581851.1 (NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018283.1 NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 486 bits (1251), Expect = 1.03e-172
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MTDRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV
Sbjct: 1   MTDRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS
Sbjct: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV
Sbjct: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           STLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS
Sbjct: 181 STLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 257
           GAKCKVDLRVKIWKWTI
Sbjct: 241 GAKCKVDLRVKIWKWTI 257

[Close]

BLAST of Csor.00g034650.m01 vs. NCBI nr
Match: XP_022980698.1 (NDR1/HIN1-like protein 13 [Cucurbita maxima])

HSP 1 Score: 482 bits (1240), Expect = 4.91e-171
Identity = 255/257 (99.22%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MTDRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRVHPNAAAAAA TNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV
Sbjct: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS
Sbjct: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV
Sbjct: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           STLKSSMKSKKGLPLQIQLDTKV LKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS
Sbjct: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 257
           GAKCKVDLRVKIWKWTI
Sbjct: 241 GAKCKVDLRVKIWKWTI 257

[Close]

BLAST of Csor.00g034650.m01 vs. NCBI nr
Match: XP_022956295.1 (NDR1/HIN1-like protein 13 [Cucurbita moschata])

HSP 1 Score: 480 bits (1235), Expect = 2.84e-170
Identity = 254/257 (98.83%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MTDRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRVHPNAAAAAA TNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV
Sbjct: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS
Sbjct: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           ARNPNKKLVFTYNPVSISIFSNEIDVG+GVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV
Sbjct: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           STLKSSMKSKKGLPLQIQLDTKV LKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS
Sbjct: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 257
           GAKCKVDLRVKIWKWTI
Sbjct: 241 GAKCKVDLRVKIWKWTI 257

[Close]

BLAST of Csor.00g034650.m01 vs. NCBI nr
Match: XP_023527724.1 (NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478 bits (1231), Expect = 1.16e-169
Identity = 253/257 (98.44%), Postives = 254/257 (98.83%), Query Frame = 0


Query: 1   MTDRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRVHPNAAAAAA TNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV
Sbjct: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS
Sbjct: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           ARNPNKKLVF YNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV
Sbjct: 121 ARNPNKKLVFIYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           STLKSSMKSKKGLPLQIQLDTKV LKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS
Sbjct: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 257
           GAKCKVDLR+KIWKWTI
Sbjct: 241 GAKCKVDLRLKIWKWTI 257

[Close]

BLAST of Csor.00g034650.m01 vs. NCBI nr
Match: XP_038875722.1 (NDR1/HIN1-like protein 13 [Benincasa hispida])

HSP 1 Score: 450 bits (1158), Expect = 1.60e-158
Identity = 239/258 (92.64%), Postives = 245/258 (94.96%), Query Frame = 0


Query: 1   MTDRVHPNAAAAAAVTNGAPAA-KTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCS 60
           MTDRVHPNAAAAAA  NGAPAA KTAPFPATKSQLYGASRPAYRPQP+HRRRRSRSCCCS
Sbjct: 1   MTDRVHPNAAAAAAAANGAPAAPKTAPFPATKSQLYGASRPAYRPQPHHRRRRSRSCCCS 60

Query: 61  VCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNV 120
           VCLWLSL +ILLIFLLA+ASAVVYLIYRP RPSFSVSAVKLS FNITSSSLLNSKFDLNV
Sbjct: 61  VCLWLSLTIILLIFLLAIASAVVYLIYRPHRPSFSVSAVKLSQFNITSSSLLNSKFDLNV 120

Query: 121 SARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSS 180
           S RNPNKKLVFTYNPVSISIFSNEID+G GV+PGFVHNTKNTTLLKTSIIS  QQLDSSS
Sbjct: 121 STRNPNKKLVFTYNPVSISIFSNEIDIGHGVLPGFVHNTKNTTLLKTSIISKGQQLDSSS 180

Query: 181 VSTLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATAST 240
            STLKSSMKSKKGLPLQIQLDTKV LKMGALKSPKIGIRVSCDGISV VPTGKSPATAST
Sbjct: 181 ESTLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVNVPTGKSPATAST 240

Query: 241 SGAKCKVDLRVKIWKWTI 257
           SGAKCKVDLR+KIWKWTI
Sbjct: 241 SGAKCKVDLRIKIWKWTI 258

[Close]

BLAST of Csor.00g034650.m01 vs. ExPASy TrEMBL
Match: A0A6J1J028 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111479991 PE=4 SV=1)

HSP 1 Score: 482 bits (1240), Expect = 2.38e-171
Identity = 255/257 (99.22%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MTDRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRVHPNAAAAAA TNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV
Sbjct: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS
Sbjct: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV
Sbjct: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           STLKSSMKSKKGLPLQIQLDTKV LKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS
Sbjct: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 257
           GAKCKVDLRVKIWKWTI
Sbjct: 241 GAKCKVDLRVKIWKWTI 257

[Close]

BLAST of Csor.00g034650.m01 vs. ExPASy TrEMBL
Match: A0A6J1GXF4 (NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111458034 PE=4 SV=1)

HSP 1 Score: 480 bits (1235), Expect = 1.37e-170
Identity = 254/257 (98.83%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MTDRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRVHPNAAAAAA TNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV
Sbjct: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS
Sbjct: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           ARNPNKKLVFTYNPVSISIFSNEIDVG+GVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV
Sbjct: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           STLKSSMKSKKGLPLQIQLDTKV LKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS
Sbjct: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 257
           GAKCKVDLRVKIWKWTI
Sbjct: 241 GAKCKVDLRVKIWKWTI 257

[Close]

BLAST of Csor.00g034650.m01 vs. ExPASy TrEMBL
Match: A0A0A0LCT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848290 PE=4 SV=1)

HSP 1 Score: 444 bits (1142), Expect = 2.20e-156
Identity = 234/259 (90.35%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MTDRVHPNAAAAAAVTNGAPAA--KTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCC 60
           MTDRVHPNAAAAAA +NGAP A  KTAPFPATKSQLYGASRPAYRPQP+HRRR SRSCCC
Sbjct: 1   MTDRVHPNAAAAAAASNGAPPAPPKTAPFPATKSQLYGASRPAYRPQPHHRRRHSRSCCC 60

Query: 61  SVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLN 120
           SVCLWLSL +ILLIFLLA+ASAVVYLIYRP RPSFSVSAVKLS FNITSSSLLNSKFDLN
Sbjct: 61  SVCLWLSLTIILLIFLLAIASAVVYLIYRPHRPSFSVSAVKLSQFNITSSSLLNSKFDLN 120

Query: 121 VSARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSS 180
           VS RNPNKKLVFTYNPVSISIFSNEID+GDGV+PGFVH TKNTTLLKTS+IS  QQLDSS
Sbjct: 121 VSTRNPNKKLVFTYNPVSISIFSNEIDIGDGVLPGFVHETKNTTLLKTSVISKGQQLDSS 180

Query: 181 SVSTLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATAS 240
           S STLKSSMKSKKGLPLQIQLDTKV LKMGALK+PKIGIRV+CDGISV VPTGKSPATAS
Sbjct: 181 SESTLKSSMKSKKGLPLQIQLDTKVKLKMGALKTPKIGIRVTCDGISVNVPTGKSPATAS 240

Query: 241 TSGAKCKVDLRVKIWKWTI 257
           TSGAKCKVDLR+KIWKWTI
Sbjct: 241 TSGAKCKVDLRIKIWKWTI 259

[Close]

BLAST of Csor.00g034650.m01 vs. ExPASy TrEMBL
Match: A0A6J1G9H3 (NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111452028 PE=4 SV=1)

HSP 1 Score: 441 bits (1134), Expect = 3.27e-155
Identity = 233/257 (90.66%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MTDRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRV+PNAAAA A TNGAPA KTAPFPATKSQLYGA+RPAY PQP+HRRRRSRSCCCSV
Sbjct: 1   MTDRVYPNAAAATA-TNGAPAPKTAPFPATKSQLYGATRPAYHPQPHHRRRRSRSCCCSV 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           CLWLSL LILLIFLLA+ASAVVYLIYRP RPSF+VSAVKLS+FNITSSSLLNSKFDLNVS
Sbjct: 61  CLWLSLTLILLIFLLAIASAVVYLIYRPHRPSFTVSAVKLSYFNITSSSLLNSKFDLNVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           ARNPNKKLVFTYNPVSIS+FSN IDVGDGV+PGFVH+TKNTTLLKTSI+S   QLDSSS 
Sbjct: 121 ARNPNKKLVFTYNPVSISVFSNGIDVGDGVLPGFVHDTKNTTLLKTSILSKSHQLDSSSE 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           STLKSSMKSKKGLPL+IQLDTKV LKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS
Sbjct: 181 STLKSSMKSKKGLPLEIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 257
           GAKCKVDLR+KIWKWTI
Sbjct: 241 GAKCKVDLRLKIWKWTI 256

[Close]

BLAST of Csor.00g034650.m01 vs. ExPASy TrEMBL
Match: A0A6J1K8K4 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111492668 PE=4 SV=1)

HSP 1 Score: 440 bits (1131), Expect = 9.36e-155
Identity = 232/257 (90.27%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 1   MTDRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRV+PNAAAA A  NGAPA KTAPFPATKSQLYGA+RPAY PQP+HRRRRSRSCCCSV
Sbjct: 1   MTDRVYPNAAAATAA-NGAPAPKTAPFPATKSQLYGATRPAYHPQPHHRRRRSRSCCCSV 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           CLWLSL LILLIFLLA+ASAVVYLIYRP RPSF+VSAVKLS+FNITSSSLLNSKFDLNVS
Sbjct: 61  CLWLSLTLILLIFLLAIASAVVYLIYRPHRPSFTVSAVKLSYFNITSSSLLNSKFDLNVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           ARNPNKKLVFTYNPVSIS+FSN IDVGDGV+PGFVH+TKNTTLLKTSI+S   QLDSSS 
Sbjct: 121 ARNPNKKLVFTYNPVSISVFSNGIDVGDGVLPGFVHDTKNTTLLKTSILSKSHQLDSSSE 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           STLKSSMKSKKGLPL+IQLDTKV LKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS
Sbjct: 181 STLKSSMKSKKGLPLEIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 257
           GAKCKVDLR+KIWKWTI
Sbjct: 241 GAKCKVDLRIKIWKWTI 256

[Close]

BLAST of Csor.00g034650.m01 vs. TAIR 10
Match: AT1G17620.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 226.9 bits (577), Expect = 1.9e-59
Identity = 133/262 (50.76%), Postives = 173/262 (66.03%), Query Frame = 0


Query: 3   DRVHPNAAAAAAVTNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRS--RSCCCSV 62
           DRV+P +   A V  GAP      FPA K+QLY A+RPAYRP P  RRR S  R CCC  
Sbjct: 4   DRVYPASKPPAIVGGGAPTTNPT-FPANKAQLYNANRPAYRP-PAGRRRTSHTRGCCCRC 63

Query: 63  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 122
           C W   ++ILL+ ++A ASAVVYLIYRPQRPSF+VS +K+S  N TS+  L +   L+V 
Sbjct: 64  CCWTIFVIILLLLIVAAASAVVYLIYRPQRPSFTVSELKISTLNFTSAVRLTTAISLSVI 123

Query: 123 ARNPNKKLVFTYNPVSISIF------SNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQ 182
           ARNPNK + F Y+   I+++       +++ +G G I  F H  KNTT L+++I S   +
Sbjct: 124 ARNPNKNVGFIYDVTDITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSPPDE 183

Query: 183 LDSSSVSTLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSP 242
           LD  S   LK  +K+KK + ++I L++KV +KMGALK+PK GIRV+C+GI V  PTGK  
Sbjct: 184 LDEISAGKLKGDLKAKKAVAIKIVLNSKVKVKMGALKTPKSGIRVTCEGIKVVAPTGKKA 243

Query: 243 ATASTSGAKCKVDLRVKIWKWT 257
            TA+TS AKCKVD R KIWK T
Sbjct: 244 TTATTSAAKCKVDPRFKIWKIT 263

[Close]

BLAST of Csor.00g034650.m01 vs. TAIR 10
Match: AT5G11890.1 (FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-37
Identity = 105/288 (36.46%), Postives = 164/288 (56.94%), Query Frame = 0


Query: 1   MTDRVHPNAAAAAAVTNGAP---AAKTAPFPAT-------------KSQLY-GASRPAYR 60
           MTDRV P A+     TNGAP   +    P PAT             K Q+Y  A+RP YR
Sbjct: 1   MTDRVFP-ASKPPTATNGAPPVGSIPPPPAPATVTSNGTTNGMANQKPQVYIPANRPVYR 60

Query: 61  PQPYHRRRRSRS------CCCSVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSA 120
           PQPY RR   +S       CC  C W  LI+++L  + A+A+  +Y+IY P+ PSFSV +
Sbjct: 61  PQPYSRRHHHQSRPSCRRICCCCCFWSILIILILALMTAIAATAMYVIYHPRPPSFSVPS 120

Query: 121 VKLSHFNITSS-----SLLNSKFDLNVSARNPNKKLVFTYNPVSISIFSNEID--VGDGV 180
           +++S  N+T+S     S L+S F+  + + NPN+ L F+Y+P ++++ S +    +G+G 
Sbjct: 121 IRISRVNLTTSSDSSVSHLSSFFNFTLISENPNQHLSFSYDPFTVTVNSAKSGTMLGNGT 180

Query: 181 IPGFVHNTKNTTLLKTSIISN--RQQLDSSSVSTLKSSMKSKKGLPLQIQLDTKVILKMG 240
           +P F  +  N T     I ++   ++LD      L+S + ++  +  +I++ TKV + MG
Sbjct: 181 VPAFFSDNGNKTSFHGVIATSTAARELDPDEAKHLRSDL-TRARVGYEIEMRTKVKMIMG 240

Query: 241 ALKSPKIGIRVSCDGISVTVPTGKSPATASTSGAKCKVDLRVKIWKWT 257
            LKS  + I+V+C+G   T+P GK+P  A++   KCK DL VK+WKW+
Sbjct: 241 KLKSEGVEIKVTCEGFEGTIPKGKTPIVATSKKTKCKSDLSVKVWKWS 286

[Close]

BLAST of Csor.00g034650.m01 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 98.6 bits (244), Expect = 7.8e-21
Identity = 80/269 (29.74%), Postives = 144/269 (53.53%), Query Frame = 0


Query: 1   MTDRVHP------NAAAAAAVTNGAPAAKTAPFPAT------KSQLYGASRP--AYRPQP 60
           M +RV+P      +   +   ++G    K AP P+T      K Q+Y    P  A+R + 
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  YHRRRRSRS-CCCSVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNI 120
             R++ +RS C C  C +L+ + IL++ L  ++ AV+YLIYRP+ P +S+    +S  N+
Sbjct: 61  LSRKKTNRSNCRCCFCSFLAAVFILIV-LAGISFAVLYLIYRPEAPKYSIEGFSVSGINL 120

Query: 121 TSSSLLNSKFDLNVSARNPNKKL-VFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLL 180
            S+S ++  F++ V +RN N K+ V+     S+ ++ N++D+ +GV+P F    KN T++
Sbjct: 121 NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVV 180

Query: 181 KTSIISNRQQLDSSSVSTLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGI 240
           K  +  ++ QL S     +++ + SKK +P ++++   V +K G++K+  + + V CD  
Sbjct: 181 KLVLSGSKIQLTSGMRKEMRNEV-SKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCD-- 240

Query: 241 SVTVPTGKSPATASTSGAKCKVDLRVKIW 254
              V   K  A +     KC  D  V +W
Sbjct: 241 ---VTVDKLTAPSRIVSRKCSHD--VDLW 260

[Close]

BLAST of Csor.00g034650.m01 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 98.6 bits (244), Expect = 7.8e-21
Identity = 80/269 (29.74%), Postives = 144/269 (53.53%), Query Frame = 0


Query: 1   MTDRVHP------NAAAAAAVTNGAPAAKTAPFPAT------KSQLYGASRP--AYRPQP 60
           M +RV+P      +   +   ++G    K AP P+T      K Q+Y    P  A+R + 
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  YHRRRRSRS-CCCSVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNI 120
             R++ +RS C C  C +L+ + IL++ L  ++ AV+YLIYRP+ P +S+    +S  N+
Sbjct: 61  LSRKKTNRSNCRCCFCSFLAAVFILIV-LAGISFAVLYLIYRPEAPKYSIEGFSVSGINL 120

Query: 121 TSSSLLNSKFDLNVSARNPNKKL-VFTYNPVSISIFSNEIDVGDGVIPGFVHNTKNTTLL 180
            S+S ++  F++ V +RN N K+ V+     S+ ++ N++D+ +GV+P F    KN T++
Sbjct: 121 NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVV 180

Query: 181 KTSIISNRQQLDSSSVSTLKSSMKSKKGLPLQIQLDTKVILKMGALKSPKIGIRVSCDGI 240
           K  +  ++ QL S     +++ + SKK +P ++++   V +K G++K+  + + V CD  
Sbjct: 181 KLVLSGSKIQLTSGMRKEMRNEV-SKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCD-- 240

Query: 241 SVTVPTGKSPATASTSGAKCKVDLRVKIW 254
              V   K  A +     KC  D  V +W
Sbjct: 241 ---VTVDKLTAPSRIVSRKCSHD--VDLW 260

[Close]

BLAST of Csor.00g034650.m01 vs. TAIR 10
Match: AT5G36970.1 (NDR1/HIN1-like 25 )

HSP 1 Score: 82.0 bits (201), Expect = 7.5e-16
Identity = 65/236 (27.54%), Postives = 116/236 (49.15%), Query Frame = 0


Query: 19  APAAKTAPFPATKSQLYGASRPAYRPQ-----PYHRRRRSRSCCCSVCLWLSLILILLIF 78
           AP   TAP     S       P    Q     P   ++ SRSC C    +  L+L LLI 
Sbjct: 15  APPHPTAPLVPRGSSRSEHGDPTKTQQAAPLDPPREKKGSRSCWCRCVCYTLLVLFLLIV 74

Query: 79  LLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVSARNPNKKLVFTYN 138
           ++     ++YL++RP+ P +++  ++L+ F +     L++ F++ ++A+NPN+K+   Y 
Sbjct: 75  IVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLSTAFNVTITAKNPNEKIGIYYE 134

Query: 139 PVS-ISIFSNEIDVGDGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSVSTLKSSMKSKKG 198
             S IS+   +  + +G +P F    +NTT++   +    Q   +S ++TL+   +    
Sbjct: 135 DGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQNA-TSLMTTLQEQQRLTGS 194

Query: 199 LPLQIQLDTKVILKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTSGAKCKVDL 249
           +PL+I++   V +K+G LK  K+   V C G+SV      S     +S  K +  L
Sbjct: 195 IPLRIRVTQPVRIKLGKLKLMKVRFLVRC-GVSVDSLAANSVIRVRSSNCKYRFRL 248

The following BLAST results are available for this feature:

BLAST of Csor.00g034650.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVD2	1.1e-19	29.74	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]
Q8LD98	9.9e-13	26.80	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]
Q9SJ52	8.4e-12	28.70	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9SRN1	2.7e-10	28.99	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9FNH6	1.7e-09	27.43	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]

BLAST of Csor.00g034650.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581851.1	1.03e-172	100.00	NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_022980698.1	4.91e-171	99.22	NDR1/HIN1-like protein 13 [Cucurbita maxima]	[more]
XP_022956295.1	2.84e-170	98.83	NDR1/HIN1-like protein 13 [Cucurbita moschata]	[more]
XP_023527724.1	1.16e-169	98.44	NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo]	[more]
XP_038875722.1	1.60e-158	92.64	NDR1/HIN1-like protein 13 [Benincasa hispida]	[more]

BLAST of Csor.00g034650.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J028	2.38e-171	99.22	NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111479991 PE=4 SV=1	[more]
A0A6J1GXF4	1.37e-170	98.83	NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111458034 PE=4 SV=...	[more]
A0A0A0LCT1	2.20e-156	90.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848290 PE=4 SV=1	[more]
A0A6J1G9H3	3.27e-155	90.66	NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111452028 PE=4 SV=...	[more]
A0A6J1K8K4	9.36e-155	90.27	NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111492668 PE=4 SV=1	[more]

BLAST of Csor.00g034650.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17620.1	1.9e-59	50.76	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G11890.1	1.2e-37	36.46	FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED...	[more]
AT2G27080.1	7.8e-21	29.74	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.2	7.8e-21	29.74	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G36970.1	7.5e-16	27.54	NDR1/HIN1-like 25	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 119..221 e-value: 1.4E-8 score: 35.2
None	No IPR available	GENE3D	2.60.40.1820		coord: 77..222 e-value: 1.2E-5 score: 27.2
None	No IPR available	PANTHER	PTHR31234:SF2	OS05G0199100 PROTEIN	coord: 12..256
None	No IPR available	PANTHER	PTHR31234	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 12..256
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 71..162

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g034650	Csor.00g034650	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g034650.m01.CDS01	Csor.00g034650.m01.CDS01	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g034650.m01.stop_codon01	Csor.00g034650.m01.stop_codon01	stop_codon

The following single feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g034650.m01.single01	Csor.00g034650.m01.single01	single

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g034650.m01.start_codon01	Csor.00g034650.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g034650.m01	Csor.00g034650.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane