Csor.00g033960.m01 (mRNA) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g033960.m01
Type	mRNA
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	60S ribosomal protein L4-like
Location	Csor_Chr07: 4659601 .. 4661656 (-)
Sequence length	1296
RNA-Seq Expression	Csor.00g033960.m01
Synteny	Csor.00g033960.m01

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTGCCGCCGCTCGCCCACTTGTTTCGGTTCAGTCCCTTGAAGGGGACATGGCCACTGATGCGGCACCCGGCGTCCCGCTGCCCGACGTGATGAAGGCTTCAATTCGGCCGGATATTGTTAGCTTTGTTCATTCCAATATCTCAAAGAACAGCCGCCAGCCCTACGCCGTCAGCAAGCGCGCCGGCCACCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCTCGTGTCCCTGGCGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCAACTAAGATCTGGCGACGTTGGCACCGAAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCGGCTATTGCGGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGCGGCCATCGTATCGAGTCTGTTCCTGAATTGCCTCTTGTTGTGAGCGACTCGGCCGAAGGCGTTGAGAAGACCTCCGCTGCAATCAAGGTTCTCAAACAGGTTGGTGCTTTTCCCGATGCTGAGAAGGCCAAGGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAACCGTCGCTACATTTCTCGCAAGGGTCCGTTGATTGTTTACGGAACTGAGGGCGCTAAACTTGTTAAGGCCTTCCGCAACATTCCGGGAGTTGAGATTGCTAATGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCTGGTGGTCACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTCGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTCCTCCCAAGGTCTAAGATGGTGAATGCAGATTTGTCAAGGATTATTAACTCTGATGAAGTCCAATCTGTGGTGAAGCCGATTAAGAAGGCTGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCGTATGCCAAGACTGCTAGAAGAATGGCTCTTTTGGCGGAGGAGCAACGTGTTAAGGCTAAAAAGGAGAAACTCGACAAGAAGAGGAATTTGACTACAAAGGTACATCATTCATGTTCTTAGTGATTATCTTCATTCTTTTAGAAATTAAGTTGCGCATATCTCCATAGTAGATTGGGCTGGCGATTTCCTTCAAATACTTATTAAGTTGATATTATTTTTGATGTGGGTTTGGTTTCGCTCTTAGGATTGATGGCATAATTAATTTAATTTTATGCTACATACAGTGGAATCTTTGTATCTGGCTCATAGTTATTGGGTCTGCTTAATGACATGCTTTTATGAAAATTATATCTCTATGTTCAATCATGTCCTGTTGTCATTTAACTTCGATAAGGATCGTTCTTGAGGACTACTGTTTACTCTCATCACTTATACTTCATAATTGATTAGATTGGTCGAATTCTTAAGTACACTTTGTTCTATGTGCTCGCCTTATCCATCCTTGTGTAAGTTCAAGTAATCTCTTGTTGATTTGGTAGAGAACTAATTTATTTTATAGATTTCTTTGTTTCATCATGATGACAAGATGTTCGTTTGATCCTTCCAAAAGTTTGTCCTTTTTGGTTTCTCATTTTAAGTTGAATCATCGATACTCCGTGACCAGAAGTTGTTTTATACGGTGGCACAATCATATGATCATATCATCTGCATTTTGTGGAACCAGACTTAACATGTCTCAGTACATATCCTATTCGTGGTGTTGACTTTCTTTTCTCCATTTTTTGTACATGATCCTCACAGGAGGAGGCTACTTCAATCAAAGCTGCAGGCAAGGCATGGTATCAGACAATGATCTCCGACAGTGATTACACCGAGTTCGACAACTTCTCGAAATGGCTCGGCGTCTCTCAGTAATTTTGCTTTTCTTTATTCAAAATCTCATAGACCTCATTACTTCGGTAAATCTAGTTTTGTCAAGGAGTTGATTTTTCTTGCTTGGATTGTTTTGCGTTTAGAGTTTAGGAGAACAATGAGTGAAGTAACATGA

mRNA sequence

ATGGCTGTTGCCGCCGCTCGCCCACTTGTTTCGGTTCAGTCCCTTGAAGGGGACATGGCCACTGATGCGGCACCCGGCGTCCCGCTGCCCGACGTGATGAAGGCTTCAATTCGGCCGGATATTGTTAGCTTTGTTCATTCCAATATCTCAAAGAACAGCCGCCAGCCCTACGCCGTCAGCAAGCGCGCCGGCCACCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCTCGTGTCCCTGGCGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCAACTAAGATCTGGCGACGTTGGCACCGAAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCGGCTATTGCGGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGCGGCCATCGTATCGAGTCTGTTCCTGAATTGCCTCTTGTTGTGAGCGACTCGGCCGAAGGCGTTGAGAAGACCTCCGCTGCAATCAAGGTTCTCAAACAGGTTGGTGCTTTTCCCGATGCTGAGAAGGCCAAGGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAACCGTCGCTACATTTCTCGCAAGGGTCCGTTGATTGTTTACGGAACTGAGGGCGCTAAACTTGTTAAGGCCTTCCGCAACATTCCGGGAGTTGAGATTGCTAATGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCTGGTGGTCACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTCGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTCCTCCCAAGGTCTAAGATGGTGAATGCAGATTTGTCAAGGATTATTAACTCTGATGAAGTCCAATCTGTGGTGAAGCCGATTAAGAAGGCTGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCGTATGCCAAGACTGCTAGAAGAATGGCTCTTTTGGCGGAGGAGCAACGTGTTAAGGCTAAAAAGGAGAAACTCGACAAGAAGAGGAATTTGACTACAAAGGAGGAGGCTACTTCAATCAAAGCTGCAGGCAAGGCATGGTATCAGACAATGATCTCCGACAGTGATTACACCGAGTTCGACAACTTCTCGAAATGGCTCGGCGTCTCTCATTTTGTCAAGGAGTTGATTTTTCTTGCTTGGATTGTTTTGCGTTTAGAGTTTAGGAGAACAATGAGTGAAGTAACATGA

Coding sequence (CDS)

ATGGCTGTTGCCGCCGCTCGCCCACTTGTTTCGGTTCAGTCCCTTGAAGGGGACATGGCCACTGATGCGGCACCCGGCGTCCCGCTGCCCGACGTGATGAAGGCTTCAATTCGGCCGGATATTGTTAGCTTTGTTCATTCCAATATCTCAAAGAACAGCCGCCAGCCCTACGCCGTCAGCAAGCGCGCCGGCCACCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCTCGTGTCCCTGGCGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCAACTAAGATCTGGCGACGTTGGCACCGAAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCGGCTATTGCGGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGCGGCCATCGTATCGAGTCTGTTCCTGAATTGCCTCTTGTTGTGAGCGACTCGGCCGAAGGCGTTGAGAAGACCTCCGCTGCAATCAAGGTTCTCAAACAGGTTGGTGCTTTTCCCGATGCTGAGAAGGCCAAGGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAACCGTCGCTACATTTCTCGCAAGGGTCCGTTGATTGTTTACGGAACTGAGGGCGCTAAACTTGTTAAGGCCTTCCGCAACATTCCGGGAGTTGAGATTGCTAATGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCTGGTGGTCACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTCGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTCCTCCCAAGGTCTAAGATGGTGAATGCAGATTTGTCAAGGATTATTAACTCTGATGAAGTCCAATCTGTGGTGAAGCCGATTAAGAAGGCTGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCGTATGCCAAGACTGCTAGAAGAATGGCTCTTTTGGCGGAGGAGCAACGTGTTAAGGCTAAAAAGGAGAAACTCGACAAGAAGAGGAATTTGACTACAAAGGAGGAGGCTACTTCAATCAAAGCTGCAGGCAAGGCATGGTATCAGACAATGATCTCCGACAGTGATTACACCGAGTTCGACAACTTCTCGAAATGGCTCGGCGTCTCTCATTTTGTCAAGGAGTTGATTTTTCTTGCTTGGATTGTTTTGCGTTTAGAGTTTAGGAGAACAATGAGTGAAGTAACATGA

Protein sequence

MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSHFVKELIFLAWIVLRLEFRRTMSEVT

Homology

[Close]

BLAST of Csor.00g033960.m01 vs. ExPASy Swiss-Prot
Match: Q9XF97 (60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 6.2e-201
Identity = 359/404 (88.86%), Postives = 384/404 (95.05%), Query Frame = 0


Query: 2   AVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 61
           A AAARPLV+VQSLEGDMATD    V LPDVMKASIRPDIV+FVHSNISKNSRQPYAVSK
Sbjct: 4   AAAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSK 63

Query: 62  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 121
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 64  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 123

Query: 122 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 181
           VNQKRYAVVSAIAASAVPSLVLARGH+IE+VPELPLVVSDS EGVE+TSAA+KVLKQ+GA
Sbjct: 124 VNQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGA 183

Query: 182 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 241
           + DAEKAKDSH+IRPGKGKMRNRRYI+RKGPLIVYGTEGAKLVKAFRNIPG++I NVERL
Sbjct: 184 YSDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERL 243

Query: 242 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 301
           NLLKLAPGGHLGRFV+WTKSAFEKLDSIYGSF+K SEKK GYVLPRSKMVNADL+RIINS
Sbjct: 244 NLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINS 303

Query: 302 DEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 361
           DEVQSVV PI++  KRAPLKKNPL+ LN MLKLNPYAKTARRM+LLAE +RVKAKKEKLD
Sbjct: 304 DEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLD 363

Query: 362 KKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 406
           KKR   +KEEA++IKAAGKAWYQTMISDSDYTEFDNF+KWLGVS
Sbjct: 364 KKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVS 407

[Close]

BLAST of Csor.00g033960.m01 vs. ExPASy Swiss-Prot
Match: Q9SF40 (60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 2.4e-192
Identity = 338/405 (83.46%), Postives = 377/405 (93.09%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           MA AAARPLV++Q+L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           SDE+QSVV PIKK  KRA LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 406
            KKR   TKEEA +IKAAGK+WY+TMISDSDYTEFDNF+KWLG S
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGAS 405

[Close]

BLAST of Csor.00g033960.m01 vs. ExPASy Swiss-Prot
Match: P49691 (60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2)

HSP 1 Score: 670.2 bits (1728), Expect = 1.5e-191
Identity = 338/405 (83.46%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           +A AAARPLV+VQ L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           SDEVQSVV PIK   KRA LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 406
           +KKR + TKEEA +IKAAGKAWYQTMISDSDYTEFDNF+KWLG S
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGAS 406

[Close]

BLAST of Csor.00g033960.m01 vs. ExPASy Swiss-Prot
Match: P08429 (60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2)

HSP 1 Score: 436.0 bits (1120), Expect = 4.8e-121
Identity = 225/385 (58.44%), Postives = 289/385 (75.06%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           +++A ARPL+SV S +G+    +   V +P V +A IRPDIV+FVH+N+ KN+RQPYAVS
Sbjct: 3   VSMACARPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVS 62

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++
Sbjct: 63  KLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRV 122

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           N  QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++ 
Sbjct: 123 NTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLK 182

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ D +K   S  +R GKGKMRNRR I R+GP ++Y  E   LVKAFRNIPG+ + NV +
Sbjct: 183 AWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGLVKAFRNIPGITLLNVSK 242

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLL+LAPGGH+GRF IWT+SAF KLD +YG++ K ++ K  Y LP  KM N DL+RI+ 
Sbjct: 243 LNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILK 302

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           S E+Q  ++   K VKR  LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K 
Sbjct: 303 SQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKP 362

Query: 361 D-----KKRNLTTKEEATSIKAAGK 381
           D      K+ L  K +   +  A K
Sbjct: 363 DDGKPKAKKPLDAKTKMIKLAKAKK 383

[Close]

BLAST of Csor.00g033960.m01 vs. ExPASy Swiss-Prot
Match: P02385 (60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2)

HSP 1 Score: 435.6 bits (1119), Expect = 6.3e-121
Identity = 224/385 (58.18%), Postives = 289/385 (75.06%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           +++A ARPL+SV S +G+    +   V +P V KA IRPDIV+FVH+N+ KN+RQPYAVS
Sbjct: 3   VSMACARPLISVYSEKGE---TSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 62

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++
Sbjct: 63  KLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRV 122

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           N  QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++ 
Sbjct: 123 NTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLK 182

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ D +K   S  +R GKGKMRNRR I R+GP ++Y  E   ++KAFRNIPG+ + NV +
Sbjct: 183 AWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGIIKAFRNIPGITLLNVSK 242

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLL+LAPGGH+GRF IWT+SAF KLD +YG++ K ++ K  Y LP  KM N DL+RI+ 
Sbjct: 243 LNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILK 302

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           S E+Q  ++   K VKR  LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K 
Sbjct: 303 SQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKP 362

Query: 361 D-----KKRNLTTKEEATSIKAAGK 381
           D      K+ L  K +   +  A K
Sbjct: 363 DDGKPKAKKPLDAKTKMIKLAKAKK 383

[Close]

BLAST of Csor.00g033960.m01 vs. NCBI nr
Match: KAG6595268.1 (60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 828 bits (2138), Expect = 4.88e-302
Identity = 431/431 (100.00%), Postives = 431/431 (100.00%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360

Query: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSHFVKELIFLAWIVLR 420
           DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSHFVKELIFLAWIVLR
Sbjct: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSHFVKELIFLAWIVLR 420

Query: 421 LEFRRTMSEVT 431
           LEFRRTMSEVT
Sbjct: 421 LEFRRTMSEVT 431

[Close]

BLAST of Csor.00g033960.m01 vs. NCBI nr
Match: XP_022972645.1 (60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 779 bits (2012), Expect = 3.01e-283
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360

Query: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405
           DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS
Sbjct: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405

[Close]

BLAST of Csor.00g033960.m01 vs. NCBI nr
Match: XP_022963036.1 (60S ribosomal protein L4 [Cucurbita moschata])

HSP 1 Score: 778 bits (2009), Expect = 8.63e-283
Identity = 404/405 (99.75%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360

Query: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405
           DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS
Sbjct: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405

[Close]

BLAST of Csor.00g033960.m01 vs. NCBI nr
Match: XP_022925909.1 (60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo] >KAG6604443.1 60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034587.1 60S ribosomal protein L4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 762 bits (1968), Expect = 1.47e-276
Identity = 394/402 (98.01%), Postives = 399/402 (99.25%), Query Frame = 0


Query: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 63
           AAARPLVSVQSLEGDMATDA P VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243
           DAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363
           VQSVVKPIKK VKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 364 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405
           RNLTTKEEAT+IK+AGKAWYQTMISDSDYTEF+NFSKWLGVS
Sbjct: 363 RNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVS 404

[Close]

BLAST of Csor.00g033960.m01 vs. NCBI nr
Match: XP_038882700.1 (60S ribosomal protein L4 [Benincasa hispida])

HSP 1 Score: 759 bits (1960), Expect = 2.43e-275
Identity = 394/402 (98.01%), Postives = 398/402 (99.00%), Query Frame = 0


Query: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 63
           AAARPLVSVQSLEGDMATDAAP VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKM+NADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMMNADLSRIINSDE 302

Query: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363
           VQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 303 VQSVVKPIKKNVKRPSLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 364 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405
           RNLTTKEEAT+I+AAGKAWYQTMISDSDYTEF+NFSKWLGVS
Sbjct: 363 RNLTTKEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVS 404

[Close]

BLAST of Csor.00g033960.m01 vs. ExPASy TrEMBL
Match: A0A6J1I983 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 SV=1)

HSP 1 Score: 779 bits (2012), Expect = 1.46e-283
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360

Query: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405
           DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS
Sbjct: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405

[Close]

BLAST of Csor.00g033960.m01 vs. ExPASy TrEMBL
Match: A0A6J1HEY8 (60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111463360 PE=3 SV=1)

HSP 1 Score: 778 bits (2009), Expect = 4.18e-283
Identity = 404/405 (99.75%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360

Query: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405
           DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS
Sbjct: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405

[Close]

BLAST of Csor.00g033960.m01 vs. ExPASy TrEMBL
Match: A0A6J1EDI0 (60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1)

HSP 1 Score: 762 bits (1968), Expect = 7.12e-277
Identity = 394/402 (98.01%), Postives = 399/402 (99.25%), Query Frame = 0


Query: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 63
           AAARPLVSVQSLEGDMATDA P VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243
           DAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363
           VQSVVKPIKK VKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 364 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405
           RNLTTKEEAT+IK+AGKAWYQTMISDSDYTEF+NFSKWLGVS
Sbjct: 363 RNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVS 404

[Close]

BLAST of Csor.00g033960.m01 vs. ExPASy TrEMBL
Match: A0A5A7TZA0 (60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00800 PE=3 SV=1)

HSP 1 Score: 757 bits (1955), Expect = 6.81e-275
Identity = 393/402 (97.76%), Postives = 397/402 (98.76%), Query Frame = 0


Query: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 63
           AAARPLVSVQSLEGDMATDAAP VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363
           VQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 364 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405
           RNLTTKE+AT+I+AAGKAWYQTMISDSDYTEF+NFSKWLGVS
Sbjct: 363 RNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVS 404

[Close]

BLAST of Csor.00g033960.m01 vs. ExPASy TrEMBL
Match: A0A1S3BL28 (60S ribosomal protein L4-like OS=Cucumis melo OX=3656 GN=LOC103491208 PE=3 SV=1)

HSP 1 Score: 757 bits (1955), Expect = 6.81e-275
Identity = 393/402 (97.76%), Postives = 397/402 (98.76%), Query Frame = 0


Query: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 63
           AAARPLVSVQSLEGDMATDAAP VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363
           VQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 364 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405
           RNLTTKE+AT+I+AAGKAWYQTMISDSDYTEF+NFSKWLGVS
Sbjct: 363 RNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVS 404

[Close]

BLAST of Csor.00g033960.m01 vs. TAIR 10
Match: AT3G09630.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 672.9 bits (1735), Expect = 1.7e-193
Identity = 338/405 (83.46%), Postives = 377/405 (93.09%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           MA AAARPLV++Q+L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           SDE+QSVV PIKK  KRA LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 406
            KKR   TKEEA +IKAAGK+WY+TMISDSDYTEFDNF+KWLG S
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGAS 405

[Close]

BLAST of Csor.00g033960.m01 vs. TAIR 10
Match: AT5G02870.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 670.2 bits (1728), Expect = 1.1e-192
Identity = 338/405 (83.46%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           +A AAARPLV+VQ L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           SDEVQSVV PIK   KRA LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 406
           +KKR + TKEEA +IKAAGKAWYQTMISDSDYTEFDNF+KWLG S
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGAS 406

[Close]

BLAST of Csor.00g033960.m01 vs. TAIR 10
Match: AT3G09630.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 666.8 bits (1719), Expect = 1.2e-191
Identity = 337/405 (83.21%), Postives = 376/405 (92.84%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           MA AAARPLV++Q+L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           SDE+QSVV PIKK  KRA LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 406
            KKR   TK EA +IKAAGK+WY+TMISDSDYTEFDNF+KWLG S
Sbjct: 361 AKKRKTVTK-EALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGAS 404

[Close]

BLAST of Csor.00g033960.m01 vs. TAIR 10
Match: AT5G02870.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 664.1 bits (1712), Expect = 7.8e-191
Identity = 337/405 (83.21%), Postives = 374/405 (92.35%), Query Frame = 0


Query: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60
           +A AAARPLV+VQ L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360
           SDEVQSVV PIK   KRA LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 406
           +KKR + TK EA +IKAAGKAWYQTMISDSDYTEFDNF+KWLG S
Sbjct: 362 EKKRKVVTK-EAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGAS 405

The following BLAST results are available for this feature:

BLAST of Csor.00g033960.m01 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF97	6.2e-201	88.86	60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1	[more]
Q9SF40	2.4e-192	83.46	60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1	[more]
P49691	1.5e-191	83.46	60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2	[more]
P08429	4.8e-121	58.44	60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2	[more]
P02385	6.3e-121	58.18	60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2	[more]

BLAST of Csor.00g033960.m01 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595268.1	4.88e-302	100.00	60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022972645.1	3.01e-283	100.00	60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal p...	[more]
XP_022963036.1	8.63e-283	99.75	60S ribosomal protein L4 [Cucurbita moschata]	[more]
XP_022925909.1	1.47e-276	98.01	60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal prot...	[more]
XP_038882700.1	2.43e-275	98.01	60S ribosomal protein L4 [Benincasa hispida]	[more]

BLAST of Csor.00g033960.m01 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I983	1.46e-283	100.00	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 S...	[more]
A0A6J1HEY8	4.18e-283	99.75	60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111463360 PE=3 SV=1	[more]
A0A6J1EDI0	7.12e-277	98.01	60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1	[more]
A0A5A7TZA0	6.81e-275	97.76	60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BL28	6.81e-275	97.76	60S ribosomal protein L4-like OS=Cucumis melo OX=3656 GN=LOC103491208 PE=3 SV=1	[more]

BLAST of Csor.00g033960.m01 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09630.1	1.7e-193	83.46	Ribosomal protein L4/L1 family	[more]
AT5G02870.1	1.1e-192	83.46	Ribosomal protein L4/L1 family	[more]
AT3G09630.2	1.2e-191	83.21	Ribosomal protein L4/L1 family	[more]
AT5G02870.2	7.8e-191	83.21	Ribosomal protein L4/L1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 346..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..74
None	No IPR available	PANTHER	PTHR19431:SF6	BNAC03G35890D PROTEIN	coord: 3..405
None	No IPR available	PANTHER	PTHR19431	60S RIBOSOMAL PROTEIN L4	coord: 3..405
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 4..309 e-value: 4.7E-142 score: 474.5
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 10..268
IPR025755	60S ribosomal protein L4, C-terminal domain	PFAM	PF14374	Ribos_L4_asso_C	coord: 281..353 e-value: 6.1E-29 score: 99.9
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 27..267 e-value: 3.6E-40 score: 137.7
IPR013000	Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site	PROSITE	PS00939	RIBOSOMAL_L1E	coord: 121..147

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csor.00g033960	Csor.00g033960	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g033960.m01.CDS01	Csor.00g033960.m01.CDS01	CDS
Csor.00g033960.m01.CDS02	Csor.00g033960.m01.CDS02	CDS
Csor.00g033960.m01.CDS03	Csor.00g033960.m01.CDS03	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g033960.m01.stop_codon01	Csor.00g033960.m01.stop_codon01	stop_codon

The following terminal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g033960.m01.terminal01	Csor.00g033960.m01.terminal01	terminal

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g033960.m01.intron01	Csor.00g033960.m01.intron01	intron
Csor.00g033960.m01.intron02	Csor.00g033960.m01.intron02	intron

The following internal feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g033960.m01.internal01	Csor.00g033960.m01.internal01	internal

The following initial feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g033960.m01.initial01	Csor.00g033960.m01.initial01	initial

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csor.00g033960.m01.start_codon01	Csor.00g033960.m01.start_codon01	start_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csor.00g033960.m01	Csor.00g033960.m01-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding